prot_Ecto-sp13_S_contig15259.3956.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig15259.3956.1 vs. uniprot
Match: D7FNY1_ECTSI (DNA-directed RNA polymerase subunit n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNY1_ECTSI) HSP 1 Score: 335 bits (859), Expect = 1.240e-104 Identity = 164/181 (90.61%), Postives = 164/181 (90.61%), Query Frame = 0
Query: 1 MMGKRVNYACRSVISPDPYVGTTEIGIPLRFAKELTYPQPVADWNVEAMRQLVENGTSVYPGANFVEDSSGRMLHLDRLSDLKRRGVAARLLSSPGQKVRKKDSALPSFFQHPVWRHLTDGDCMLVNRQPTLHKPGIMAHRVRVLRNPGYQTIRMHYANCNTYNADFDGDEINCHLPQVRL 181
MMGKRVNYACRSVISPDPYVGTTEIGIPLRFAKELTYPQPVADWNVEAMRQLVENGTSVYPGANFVEDSSGRMLHLDRLSDLKRRGVAARLLSSPGQKV WRHLTDGDCMLVNRQPTLHKPGIMAHRVRVLRNPGYQTIRMHYANCNTYNADFDGDEINCHLPQ L
Sbjct: 494 MMGKRVNYACRSVISPDPYVGTTEIGIPLRFAKELTYPQPVADWNVEAMRQLVENGTSVYPGANFVEDSSGRMLHLDRLSDLKRRGVAARLLSSPGQKV---------------WRHLTDGDCMLVNRQPTLHKPGIMAHRVRVLRNPGYQTIRMHYANCNTYNADFDGDEINCHLPQNEL 659
BLAST of mRNA_Ecto-sp13_S_contig15259.3956.1 vs. uniprot
Match: A0A6H5KJ16_9PHAE (DNA-directed RNA polymerase subunit n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ16_9PHAE) HSP 1 Score: 329 bits (844), Expect = 3.720e-101 Identity = 161/181 (88.95%), Postives = 162/181 (89.50%), Query Frame = 0
Query: 1 MMGKRVNYACRSVISPDPYVGTTEIGIPLRFAKELTYPQPVADWNVEAMRQLVENGTSVYPGANFVEDSSGRMLHLDRLSDLKRRGVAARLLSSPGQKVRKKDSALPSFFQHPVWRHLTDGDCMLVNRQPTLHKPGIMAHRVRVLRNPGYQTIRMHYANCNTYNADFDGDEINCHLPQVRL 181
MMGKRVNYACRSVISPDPY+GTTEIGIPLRFAKELTYPQPVADWNVEAMRQLVENGTSVYPGANFVEDSSGRMLHLDRLSDLKRRGVAARLLS PGQKV WRHL DGDCMLVNRQPTLHKPGIMAHRVRVLRNPGYQTIRMHYANCNTYNADFDGDEINCHLPQ L
Sbjct: 495 MMGKRVNYACRSVISPDPYLGTTEIGIPLRFAKELTYPQPVADWNVEAMRQLVENGTSVYPGANFVEDSSGRMLHLDRLSDLKRRGVAARLLSIPGQKV---------------WRHLKDGDCMLVNRQPTLHKPGIMAHRVRVLRNPGYQTIRMHYANCNTYNADFDGDEINCHLPQNEL 660
BLAST of mRNA_Ecto-sp13_S_contig15259.3956.1 vs. uniprot
Match: A0A836C8M0_9STRA (DNA-directed RNA polymerase subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8M0_9STRA) HSP 1 Score: 266 bits (681), Expect = 3.190e-79 Identity = 126/181 (69.61%), Postives = 145/181 (80.11%), Query Frame = 0
Query: 1 MMGKRVNYACRSVISPDPYVGTTEIGIPLRFAKELTYPQPVADWNVEAMRQLVENGTSVYPGANFVEDSSGRMLHLDRLSDLKRRGVAARLLSSPGQKVRKKDSALPSFFQHPVWRHLTDGDCMLVNRQPTLHKPGIMAHRVRVLRNPGYQTIRMHYANCNTYNADFDGDEINCHLPQVRL 181
MMGKRVN++CRSVISPDPY+GTTEIGIP RFAK L +PQPVA WNVE +R LVENG YPGAN++ED++G++++L R S ++R+G+AARLLS PGQKV WRHL D D MLVNRQPTLHKPGIMAH R+LRNP YQTIRMHYANCNTYNADFDGDEINCHLPQ +
Sbjct: 405 MMGKRVNHSCRSVISPDPYIGTTEIGIPERFAKVLCFPQPVAAWNVEHLRTLVENGADFYPGANYIEDAAGKLINLRRQSAVQRKGMAARLLSEPGQKV---------------WRHLQDRDAMLVNRQPTLHKPGIMAHHARILRNPTYQTIRMHYANCNTYNADFDGDEINCHLPQNEV 570
BLAST of mRNA_Ecto-sp13_S_contig15259.3956.1 vs. uniprot
Match: K8YRY5_NANGC (DNA-directed RNA polymerase subunit n=2 Tax=Monodopsidaceae TaxID=425072 RepID=K8YRY5_NANGC) HSP 1 Score: 245 bits (626), Expect = 8.050e-72 Identity = 117/181 (64.64%), Postives = 137/181 (75.69%), Query Frame = 0
Query: 1 MMGKRVNYACRSVISPDPYVGTTEIGIPLRFAKELTYPQPVADWNVEAMRQLVENGTSVYPGANFVEDSSGRMLHLDRLSDLKRRGVAARLLSSPGQKVRKKDSALPSFFQHPVWRHLTDGDCMLVNRQPTLHKPGIMAHRVRVLRNPGYQTIRMHYANCNTYNADFDGDEINCHLPQVRL 181
MMGKRVN+ACRSVISPDPY+GT+EIG+PLRFAK LTY QPV +N +R+ VE G +PGAN+VED+ GR++ L R+ +RR +AARLL+ PGQ VWRHL DGD +L+NRQPTLHKPGIMAHR RVLR+P QTIRMHYANCNTYNADFDGDE+NCH PQ L
Sbjct: 469 MMGKRVNFACRSVISPDPYIGTSEIGLPLRFAKVLTYSQPVTPFNAAQLREAVERGAEGHPGANYVEDARGRLIDLRRMDAGRRRALAARLLTPPGQ---------------TVWRHLQDGDMVLMNRQPTLHKPGIMAHRARVLRSPAQQTIRMHYANCNTYNADFDGDEMNCHFPQDEL 634
BLAST of mRNA_Ecto-sp13_S_contig15259.3956.1 vs. uniprot
Match: A0A6A5A090_9STRA (DNA-directed RNA polymerase (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5A090_9STRA) HSP 1 Score: 224 bits (570), Expect = 4.820e-71 Identity = 110/184 (59.78%), Postives = 132/184 (71.74%), Query Frame = 0
Query: 1 MMGKRVNYACRSVISPDPYVGTTEIGIPLRFAKELTYPQPVADWNVEAMRQLVENGTSVYPGANFVEDSSGRMLHLDRLSDLKRRGVAARLLSSPGQKVRKKDSALPSFFQHPV---WRHLTDGDCMLVNRQPTLHKPGIMAHRVRVLRNPGYQTIRMHYANCNTYNADFDGDEINCHLPQVRL 181
MMGKRVNYA RSVISPDPY+ T+EIG+PL+FAK LT PQ V WNVE MRQLVENG ++PGANFVE+ G+++ L + + +R + LL+ + SA + +H V WRHL GD +L+NRQPTLHKP +MAH RVL NP QTIRMHYANCNTYNADFDGDE+N H PQ L
Sbjct: 40 MMGKRVNYAARSVISPDPYISTSEIGVPLKFAKTLTLPQAVTPWNVEEMRQLVENGPDIHPGANFVENERGQLIDLSKRTHHQRVAIGKTLLT-------RSASAHGAHQEHKVKRVWRHLHSGDVVLMNRQPTLHKPSMMAHVTRVLTNPAMQTIRMHYANCNTYNADFDGDEMNMHFPQNEL 216
BLAST of mRNA_Ecto-sp13_S_contig15259.3956.1 vs. uniprot
Match: A0A7S3HJA2_9STRA (DNA-directed RNA polymerase (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HJA2_9STRA) HSP 1 Score: 226 bits (576), Expect = 2.380e-67 Identity = 110/181 (60.77%), Postives = 132/181 (72.93%), Query Frame = 0
Query: 1 MMGKRVNYACRSVISPDPYVGTTEIGIPLRFAKELTYPQPVADWNVEAMRQLVENGTSVYPGANFVEDSSGRMLHLDRLSDLKRRGVAARLLSSPGQKVRKKDSALPSFFQHPVWRHLTDGDCMLVNRQPTLHKPGIMAHRVRVLRNPGYQTIRMHYANCNTYNADFDGDEINCHLPQVRL 181
MMGKRVN+ CRSVISPDPY+GT EIGIP+ FAK L YP PV +WNV+ +R LV+ G YPGAN +E + G+++ L++LS ++R G A LLS+PG KV RHL DGD +LVNRQPTLHKPGIMAH+ RVLR+ QT+RMHYANCNTYNADFDGDE+NCH Q L
Sbjct: 6 MMGKRVNFCCRSVISPDPYIGTNEIGIPVHFAKSLHYPTPVNNWNVKYLRTLVQRGPFQYPGANQIELADGKIIKLEKLSAMERAGKAKLLLSTPGIKVH---------------RHLIDGDVLLVNRQPTLHKPGIMAHKARVLRHVKEQTLRMHYANCNTYNADFDGDEMNCHFVQSEL 171
BLAST of mRNA_Ecto-sp13_S_contig15259.3956.1 vs. uniprot
Match: A0A484E7B9_BRELC (DNA-directed RNA polymerase subunit n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E7B9_BRELC) HSP 1 Score: 231 bits (590), Expect = 5.570e-67 Identity = 111/186 (59.68%), Postives = 132/186 (70.97%), Query Frame = 0
Query: 1 MMGKRVNYACRSVISPDPYVGTTEIGIPLRFAKELTYPQPVADWNVEAMRQLVENGTSVYPGANFVEDSSGRMLHLDRLSDLKRRGVAARLLSSPGQKVRKKDSALPSFFQHPVWRHLTDGDCMLVNRQPTLHKPGIMAHRVRVLRNPGYQTIRMHYANCNTYNADFDGDEINCHLPQVRLLGDNA 186
MMGKRVNYA RSVISPDPY+ T++IG+PLRFAK LTYPQPV WNVE MRQLV NG ++PGANFVE SGR++ L + + +R ++ LL+ + + + VWRHL GD +L+NRQPTLHKP IMAH RVL NP QTIRMHYANCNT+NADFDGDE+N H PQ L A
Sbjct: 470 MMGKRVNYAARSVISPDPYISTSQIGVPLRFAKTLTYPQPVTPWNVEEMRQLVINGPDMHPGANFVESESGRLIDLSKRTPHQREAISKTLLTRSASALGTSKNRVKR-----VWRHLKTGDVVLMNRQPTLHKPSIMAHTTRVLTNPNMQTIRMHYANCNTFNADFDGDEMNMHFPQNELARSEA 650
BLAST of mRNA_Ecto-sp13_S_contig15259.3956.1 vs. uniprot
Match: A0A5D6XPF2_9STRA (DNA-directed RNA polymerase subunit n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XPF2_9STRA) HSP 1 Score: 231 bits (589), Expect = 7.600e-67 Identity = 114/184 (61.96%), Postives = 133/184 (72.28%), Query Frame = 0
Query: 1 MMGKRVNYACRSVISPDPYVGTTEIGIPLRFAKELTYPQPVADWNVEAMRQLVENGTSVYPGANFVEDSSGRMLHLDRLSDLKRRGVAARLLSSPGQKVRKKDSALPSFFQHPV---WRHLTDGDCMLVNRQPTLHKPGIMAHRVRVLRNPGYQTIRMHYANCNTYNADFDGDEINCHLPQVRL 181
MMGKRVNYA RSVISPDPY+ T++IG+PLRFAK LTYPQPV WNVE MRQLV NG V+PGANFVE SGR++ L R S +R ++ LL+ + ++ QH V WRHL GD +L+NRQPTLHKP +MAH RVL NP QTIRMHYANCNT+NADFDGDE+N H PQ L
Sbjct: 467 MMGKRVNYAARSVISPDPYISTSQIGVPLRFAKTLTYPQPVTPWNVEEMRQLVINGPDVHPGANFVESESGRLIDLKRRSAHQREAISKTLLT--------RSASAQGTSQHRVKRVWRHLHTGDIVLMNRQPTLHKPSMMAHVTRVLTNPAMQTIRMHYANCNTFNADFDGDEMNMHFPQNEL 642
BLAST of mRNA_Ecto-sp13_S_contig15259.3956.1 vs. uniprot
Match: A0A7S1FLV4_9STRA (DNA-directed RNA polymerase (Fragment) n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FLV4_9STRA) HSP 1 Score: 229 bits (584), Expect = 7.980e-67 Identity = 113/186 (60.75%), Postives = 137/186 (73.66%), Query Frame = 0
Query: 1 MMGKRVNYACRSVISPDPYVGTTEIGIPLRFAKELTYPQPVADWNVEAMRQLVENGTSVYPGANFVEDSSGRMLHLDRLSDLKRRGVAARLLSSPGQKVRKKDSALPSFFQHPVWRHLTDGDCMLVNRQPTLHKPGIMAHRVRVLRNPGYQTIRMHYANCNTYNADFDGDEINCHLPQVRLLGDNA 186
MMGKRVNYACRSVISPDPY+GT EIG+PL+FA++LTYP V +NV MR+LV NGT+ YPGA +V+D G+ + L + D+KR +A RLLS GQ V V R + +GD +L+NRQPTLHKPGIMAH+VR+L NP QTIRMHYANCNTYNADFDGDE+NCHLPQ ++ A
Sbjct: 331 MMGKRVNYACRSVISPDPYIGTNEIGLPLKFAQKLTYPCHVTAFNVAEMRKLVANGTARYPGAVWVQDPHGKRMMLTHMIDVKREAIANRLLSGEGQYV--------------VGRQIQNGDMVLMNRQPTLHKPGIMAHQVRILYNPLQQTIRMHYANCNTYNADFDGDEMNCHLPQDQISRSEA 502
BLAST of mRNA_Ecto-sp13_S_contig15259.3956.1 vs. uniprot
Match: H3H1S7_PHYRM (DNA-directed RNA polymerase subunit n=22 Tax=Peronosporaceae TaxID=4777 RepID=H3H1S7_PHYRM) HSP 1 Score: 231 bits (588), Expect = 1.030e-66 Identity = 112/186 (60.22%), Postives = 131/186 (70.43%), Query Frame = 0
Query: 1 MMGKRVNYACRSVISPDPYVGTTEIGIPLRFAKELTYPQPVADWNVEAMRQLVENGTSVYPGANFVEDSSGRMLHLDRLSDLKRRGVAARLLSSPGQKVRKKDSALPSFFQHPVWRHLTDGDCMLVNRQPTLHKPGIMAHRVRVLRNPGYQTIRMHYANCNTYNADFDGDEINCHLPQVRLLGDNA 186
MMGKRVNYA RSVISPDPY+ T++IG+PLRFAK LTYPQPV WNVE MRQLV NG V+PGANFVE +GR++ L + S +R ++ LL+ + + VWRHL GD +L+NRQPTLHKP IMAH RVL NP QTIRMHYANCNT+NADFDGDE+N H PQ L A
Sbjct: 461 MMGKRVNYAARSVISPDPYISTSQIGVPLRFAKTLTYPQPVTPWNVEEMRQLVINGPDVHPGANFVESENGRLIDLSKRSPHQREAISKTLLTRSASAQGTSKNRVKR-----VWRHLKTGDVVLMNRQPTLHKPSIMAHTTRVLTNPKMQTIRMHYANCNTFNADFDGDEMNMHFPQNELARSEA 641 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15259.3956.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_Ecto-sp13_S_contig15259.3956.1 ID=prot_Ecto-sp13_S_contig15259.3956.1|Name=mRNA_Ecto-sp13_S_contig15259.3956.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=188bpback to top |