mRNA_Ecto-sp13_S_contig15213.3929.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig15213.3929.1
Unique NamemRNA_Ecto-sp13_S_contig15213.3929.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig15213.3929.1 vs. uniprot
Match: D8LRS0_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRS0_ECTSI)

HSP 1 Score: 178 bits (452), Expect = 3.090e-45
Identity = 88/120 (73.33%), Postives = 102/120 (85.00%), Query Frame = 1
Query:   22 MHLFPKRASLRGFESEIFKLVSYGATPQQWAEWLRVPLGHAAGRGNLDLVNMLIEAGADGSA*WRGCRGRTLLDAAALGGSAGVIAALLRAGARPDVKVVSMSPKRSALYVSTLCSHVHA 381
            M+++PKR  L+G ESEI+KLVSYGATPQQW EWLRVPL HAA RGNL+LVN L+EAGADGSA WRGC  RTL+DAAALGGS  V++ALLRAGA+PDV  VS+S KRSALY +T+C H HA
Sbjct:    1 MYVYPKRRLLQGMESEIWKLVSYGATPQQWKEWLRVPLEHAAARGNLNLVNSLLEAGADGSAGWRGCLDRTLIDAAALGGSEPVVSALLRAGAQPDVNTVSISSKRSALYTATVCGHEHA 120          
BLAST of mRNA_Ecto-sp13_S_contig15213.3929.1 vs. uniprot
Match: D8LRZ8_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRZ8_ECTSI)

HSP 1 Score: 174 bits (442), Expect = 7.300e-44
Identity = 87/143 (60.84%), Postives = 106/143 (74.13%), Query Frame = 1
Query:   22 MHLFPKRASLRGFESEIFKLVSYGATPQQWAEWLRVPLGHAAGRGNLDLVNMLIEAGADGSA*WRGCRGRTLLDAAALGGSAGVIAALLRAGARPDVKVVSMSPKRSALYVSTLCSHVHAREVCFSLGRM*TLRTPCVGVASC 450
            MH++P+R   +G  SEI+KLVS+ ATPQQW EWLRVPL HAA RGNL+LVN L+EAGADGSA W+GCRGRTL+DAAALGGS  V++ALLRAGA+PDV VVS+S KRS+LY +T+C H  A     + G       P   +  C
Sbjct:    1 MHVYPERRLFQGMGSEIWKLVSHSATPQQWKEWLRVPLEHAAARGNLNLVNSLLEAGADGSAGWKGCRGRTLIDAAALGGSEPVVSALLRAGAQPDVNVVSVSSKRSSLYTATVCGHKDAARRLITAGADVNFEDPTGSILGC 143          
BLAST of mRNA_Ecto-sp13_S_contig15213.3929.1 vs. uniprot
Match: D8LS36_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS36_ECTSI)

HSP 1 Score: 169 bits (428), Expect = 9.210e-42
Identity = 84/120 (70.00%), Postives = 100/120 (83.33%), Query Frame = 1
Query:   22 MHLFPKRASLRGFESEIFKLVSYGATPQQWAEWLRVPLGHAAGRGNLDLVNMLIEAGADGSA*WRGCRGRTLLDAAALGGSAGVIAALLRAGARPDVKVVSMSPKRSALYVSTLCSHVHA 381
            MH++P+R  L+G ESEI+KLVSY ATPQQW EWLR+PL HAA RGNL+LV+ L+ AGADGSA WRGCRGRTL+DAAALGGS  V++ LLRAGA+ DV VVS+S KRSALY +T+C H  A
Sbjct:    1 MHVYPERRLLQGMESEIWKLVSYSATPQQWKEWLRMPLEHAAARGNLNLVSSLLGAGADGSAGWRGCRGRTLIDAAALGGSEPVVSTLLRAGAQWDVNVVSVSSKRSALYTATMCGHEDA 120          
BLAST of mRNA_Ecto-sp13_S_contig15213.3929.1 vs. uniprot
Match: A0A6H5KNQ1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNQ1_9PHAE)

HSP 1 Score: 159 bits (403), Expect = 5.980e-40
Identity = 84/144 (58.33%), Postives = 103/144 (71.53%), Query Frame = 1
Query:   22 MHLFPKRASLRGFESEIFKLVSYGATPQQWAEWLRVPLGHAAGRGNLDLVNMLIEAGADGSA*WRGCRGRTLLDAAALGGSAGVIAALLRAGARPDVKVVSMSPKRSALYVSTLCSHVHAREVCFSLGRM*TLRTPCVGVASCT 453
            MH+FP+R SL G  SE+FKLVSYGA+ +QWAEWLRVPL HAA RGN +LV  L++AGAD  A WRGCRGRTLLDAAALGG+A V++AL+R GA  DV  V++S +RSAL+ +T C H  A +     G     R P   VA C+
Sbjct:    1 MHIFPERTSLDGLGSEVFKLVSYGASREQWAEWLRVPLEHAASRGNPNLVERLLQAGADAGAGWRGCRGRTLLDAAALGGNADVMSALIRGGAGADVNKVTVSSRRSALHTATCCGHEAAAKRLVLTGADVNFRDP---VAKCS 141          
BLAST of mRNA_Ecto-sp13_S_contig15213.3929.1 vs. uniprot
Match: A0A6H5K1F4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1F4_9PHAE)

HSP 1 Score: 161 bits (408), Expect = 1.310e-38
Identity = 183/605 (30.25%), Postives = 245/605 (40.50%), Query Frame = 1
Query:   22 MHLFPKRASLRGFESEIFKLVSYGATPQQWAEWLRVPLGHAAGRGNLDLVNMLIEAGADGSA*WRGCRGRTLLDAAALGGSAGVIAALLRAGARPDVKVVSMSPKRSALYVSTLCSHVHAREVCFSLGRM*TLRTPCVGVASCTRSRSEGTNNW*TTC**VVQIHSCVE----DGSTALLSARSCPR-RAAGDRVPFIIARDG---------------DKHALDCDGDSALIWAAWNGL*P*LRLFYRL---VPMSTFGGVQ---TASRRSTTLLRLGMFLS------SKRSLNTG*MWILAMVTGVS-----------------PSIVQLNPIR*VL*MQSSRPGRTPSASRSKGGH----RC---STPHCSTKKAKR-CQLFCDMELSLAP---------LMISDSRH*TRFTFASTPA*S-GTWICCCDGERRRQPWTTTGRHRGRSSMNFHLLASAAP*LMSSAYDFY*NTRAPADRAWRRRCWMVMLRSRCTKAEANGYDVGGETRVYSNQAGGRPGKSLKNDNTDGKGALGHHHDINGQPCKYG----GKVGTGGG--------------AKRAGLSGIVTFPVDLEVKDAFHTVVGFM 1581
            MHL+PKRA L G E EIFKL+ +GATP+QWAEWLR PL HAA RGNL LV  L+ AGA+G A WRGCRGRT+LDAAALGG+  V+A LL +G   DV VVS+S +RSAL+V+++C H  A +                 +A    +R +  +     C   V +H  VE    D    LL   +CP  R    R P  +A                  D  ALD  G S L+ A+  G    +    R    + +   GG     TA   + +   +G+  +      + R+ +T  +  L    G                   P++    P+  V  M +S       A   +GG+     C   S  H +     R      D+ L             L  SD    T   + +  A   G+   C  G   R    T    R R      LLA                 RAPADR WRRRCW+VMLR+R  +         G  R  +       G++L             H + +G   K G    G VG G G                 AG  G+V   V LE ++ F T+V F+
Sbjct:    1 MHLYPKRALLEGAELEIFKLLYFGATPEQWAEWLRAPLEHAAARGNLGLVERLLNAGANGGAGWRGCRGRTMLDAAALGGNPDVVATLLASGCASDVNVVSLSSRRSALHVASVCGHEAAAKKLI--------------IAGADVNRVDPGD----AC---VSLHVAVEGRHGDLVDLLLIGGACPNSRTMSGRTPLHLAAASGNNRVVSTLLGNAMTDVDALDSRGVSPLMVASEGGHCSTVEALLRAGADMNLRHAGGAHLGMTAMDVAVSKGHVGVIEAIVENGGNVRATDTYGLTALHHARGAQAVDVLLDAGADVNAKACPALHGFTPLS-VCVMDNSC--EAVVALLKRGGNVNDTNCGGLSALHLTCGSLSRGMDRMVDLLLRWGASETAVNKNGLTPSDILKVTTAEYHARDAGGDGSATRCVGGSATRHDSLTKEIQRARV-----LLA-----------------RAPADRTWRRRCWLVMLRARAERGRGAPSSGSGSDRTEA-----ATGRNLP-----------RHEEADGDNSKVGKTDAGAVGEGSGPTDGERGRDGRATRGAAAGEGGLVPALVGLESEEVFRTIVCFL 543          
BLAST of mRNA_Ecto-sp13_S_contig15213.3929.1 vs. uniprot
Match: A0A6H5JY41_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY41_9PHAE)

HSP 1 Score: 157 bits (398), Expect = 1.570e-37
Identity = 103/238 (43.28%), Postives = 127/238 (53.36%), Query Frame = 1
Query:   22 MHLFPKRASLRGFESEIFKLVSYGATPQQWAEWLRVPLGHAAGRGNLDLVNMLIEAGADGSA*WRGCRGRTLLDAAALGGSAGVIAALLRAGARPDVKVVSMSPKRSALYVSTLCSHVHAREVCFSLGRM*TLRTPCVGVASCTRSRSEGTNNW*TTC**VVQIHSCVEDGSTAL----LSARSCPR-RAAGDRVPFIIAR-------------DGDKH--ALDCDGDSALIWAAWNG 675
            MHL PKRA L   E EIFKL+S+GATP++WAEWLR P  HAA RGN+ LV  L+EAGADG A WRGCR RT+LDAAALGG+A V+  LLR+   PDV VVS+S KRSAL+++   SH  A                   +A     R +  N +          H   E G   L    L+  +CP  R+   R P  +A              D + H  ALD DG S L+ A+ NG
Sbjct:    1 MHLDPKRALLEEAELEIFKLLSFGATPERWAEWLRAPQEHAAARGNIGLVERLLEAGADGGAGWRGCRSRTMLDAAALGGNADVVTKLLRSECVPDVNVVSVSSKRSALHLAVTWSHEAAARTLM--------------IAGADNHRVDPVNRY-------TPFHVAAEGGHDDLVDNYLTGGACPNSRSRVGRTPLHLADGLGNNRDVSALLGDANTHMDALDNDGFSPLMLASRNG 217          
BLAST of mRNA_Ecto-sp13_S_contig15213.3929.1 vs. uniprot
Match: D7FXA8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXA8_ECTSI)

HSP 1 Score: 151 bits (381), Expect = 2.300e-35
Identity = 169/554 (30.51%), Postives = 235/554 (42.42%), Query Frame = 1
Query:   40 RASLRGFESEIFKLVSYGATPQQWAEWLRVPLGHAAGRGNLDLVNMLIEAGADGSA*WRGCRGRTLLDAAALGGSAGVIAALLRAGARPDVKVVSMSPKRSALYVSTLCSHVHAREVCFSLGR--------------M*TLRTPCVGVASCTRSRSEGTNNW*TTC**VVQ--------IHSCVEDG----STALLSARSCPRRAAGDRVPFIIARDGDKHALDCDGDSALIWAA-WNGL*P*LRLFYRLVPMST----FGGVQTASRRSTT-----LLRLGMFLSSKRSLNTG*MWI-LAMVTGVSPSIVQLNPIR*VL*MQSSRPGRTPSASRSKGGHRCSTPHCSTKKAKRC-QLFCDMELSLAPLMISDSRH*TRFTFASTPA*SGTWICCCDGERRRQPWTTTGRHRGRSSMNFHLLASAAP*LMSSAYDFY*NTRAPADRAWRRRCWMVMLRSRCTKAEANGYDVGGETRVYSNQAGGRPGKSLKNDNTDGKGALGHHHDINGQPCKYGGKVGTGGG--AKRAGLSGIVTFPVDLEVKDAFHTVVGFM 1581
            + S  G E EIFK+VS GATP+QWA WLR PL HAA  GNL+LV+ L++AG DG A WRGCRGR+LLDAAALGG+AGV++ALL+AG  PDV VV+ S  RSALY S L  H  A       G                  ++  C  +           N        +V+        +H+  + G    ++ LLS+ S  +      V  ++A   D    D D  SAL++AA +  +     L    V ++     +  +  A++ ++T     LL  G  +  K S   G   +  A  TG + +++ L                           R +  H +T        L  +ME   AP    D+        AS  A         D  +R Q    + R  G S   +  L  A   L           RAPADR WRRRCW++MLR R  K       + G  R    + G   G  L      G G  G  +++     + G   G GGG  A    L G+V+  V LE    F T++G++
Sbjct:    5 QTSPSGEEVEIFKIVSEGATPEQWARWLRAPLEHAAASGNLNLVDRLLKAGVDGKAGWRGCRGRSLLDAAALGGNAGVMSALLQAGCGPDVNVVASSTGRSALYQSVLGKHEAAARKLILAGADVNFVDRADKAGPLFAAVKAGCDDLVGNLLMAGANPNV-------IVRHSFGHGTPLHAAAKQGLANTASVLLSSPSTDKNGHVATVKVLLAAGADTDIRDLDSHSALVFAAQYERIDVMKALLEHGVDVNVGEDHWNPLHWAAQFNSTGCITVLLDAGADIDVKCSFLDGRTSLHFAAETGNNEALLALL-------------------------RRGANVHQTTDDGSTALHLVSEME-GHAP---DDTVDILLRRGASEQAVDRNGKAPVDLFKRVQRRFQSARPMGDSE--WPELERAIELL----------ARAPADRTWRRRCWLIMLRERTNKERT----IHGGRRRKGKKVGNGEGLLL------GDGKRGGSNNVR----RSGRSRGRGGGRAAVEVDLRGLVSVLVCLESDGVFRTILGYI 496          
BLAST of mRNA_Ecto-sp13_S_contig15213.3929.1 vs. uniprot
Match: A0A6H5JW91_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW91_9PHAE)

HSP 1 Score: 140 bits (352), Expect = 2.570e-34
Identity = 72/124 (58.06%), Postives = 85/124 (68.55%), Query Frame = 1
Query:    1 STHAALQMHLFPKRASLRGFESEIFKLVSYGATPQQWAEWLRVPLGHAAGRGNLDLVNMLIEAGADGSA*WRGCRGRTLLDAAALGGSAGVIAALLRAGARPDVKVVSMSPKRSALYVSTLCSH 372
            S H   + H++PKR  L G E EIFKLVSY ATP+QW EWL+VPL  AA  GN DL   L+EAGA GSA WRGCR R+L+DAAA+GG+  V++  L AGA PDV+VVS S K SAL       H
Sbjct:   37 SDHTDTKTHIYPKRVLLEGLEIEIFKLVSYSATPEQWKEWLQVPLERAAALGNRDLFYKLLEAGAYGSAGWRGCRDRSLIDAAAVGGNVDVVSGFLEAGAEPDVQVVSWSSKTSALCTPVRFGH 160          
BLAST of mRNA_Ecto-sp13_S_contig15213.3929.1 vs. uniprot
Match: D8LBP9_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBP9_ECTSI)

HSP 1 Score: 146 bits (368), Expect = 1.450e-33
Identity = 72/115 (62.61%), Postives = 85/115 (73.91%), Query Frame = 1
Query:   28 LFPKRASLRGFESEIFKLVSYGATPQQWAEWLRVPLGHAAGRGNLDLVNMLIEAGADGSA*WRGCRGRTLLDAAALGGSAGVIAALLRAGARPDVKVVSMSPKRSALYVSTLCSH 372
            ++P+R  L G E  IF L+SYGATP+QW EWLR PL HAA RG   LV  L+ AGADG A W GCRGRTLLDAAALGG+  V+  LLRAG  PDV VVS+S +RSAL++S +C H
Sbjct:    1 MYPRRPVLEGAEVGIFTLLSYGATPEQWREWLRAPLEHAAARGEFVLVEKLLNAGADGGAGWSGCRGRTLLDAAALGGNPDVVTTLLRAGCLPDVNVVSVSSRRSALHLSAVCGH 115          
BLAST of mRNA_Ecto-sp13_S_contig15213.3929.1 vs. uniprot
Match: D8LE08_ECTSI (Similar to ankyrin 2,3/unc44, partial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE08_ECTSI)

HSP 1 Score: 144 bits (364), Expect = 1.710e-33
Identity = 143/466 (30.69%), Postives = 190/466 (40.77%), Query Frame = 1
Query:   22 MHLFPKRASLRGFESEIFKLVSYGATPQQWAEWLRVPLGHAAGRGNLDLVNMLIEAGADGSA*WRGCRGRTLLDAAALGGSAGVIAALLRAGARPDVKVVSMSPKRSALYVSTLCSHVHAREVCFSLGRM*TLRTP---CVGV------------------ASCTRSRSEGTNNW*TTC**VVQIHSCVEDGSTALLSARSCPRRAAGDRVPFIIARDGDKHALDCDGDSALIWAAWNGL*P*LRLFYRLVPMSTFGGVQTASRRSTT--LLRLGMFLSSKRSLNTG*MWILAMVTGVSPSIVQLNPIR*VL*MQSSRPGRTPSASRSKGGHRCSTPHCSTKKAKRCQLFCDMELSLAPLMISDSRH*TRFTFASTPA*SGTWICCCDGERRRQPWTTTGRHRGRSSMNFHLLASAAP*LMSSAYDFY*NT---------------RAPADRAWRRRCWMVMLRSR 1305
            MHL+PKRA L G E EIFKL+S+ ATP+QWA+WLR PL HAA RGN+ LV  L+EAGADG A WRGCRGRT+LDAA              +G  PDV VVS+S KRSAL+++ +C H  A       G       P   CV                     +C  SR+               +H     G++ ++S         GD    I ARD D H       S L+ A+ NG                         RST   LLR G   + +    +G +  +A +      +V +              G  P  + +  GH            KR   F +           D+   +   +A     SGT     D   R     T    RG +  ++    +AA   ++S+     N+               RAPADRAWRRRCW+VMLR+R
Sbjct:    1 MHLYPKRALLEGAEVEIFKLLSFCATPEQWADWLRAPLEHAAARGNIGLVERLLEAGADGRAGWRGCRGRTMLDAAXXXXXXXXXXXXXXSGCAPDVNVVSVSSKRSALHLAVVCGHEAAARTLMIAGANIRRVDPGDQCVPFHVAAEGGHGDLVGNLLIGGACPNSRTRFGR---------TPLHVAAAVGNSRVVST------LLGDTSTSINARDNDLH-------SPLMLASANG------------------------HRSTVEALLRAGADTTLR--CYSGGVSDMAALEMAGGEVVDVXXXXXXXXXXXXAGGSIPLHASAVHGH----DETMVALLKREGNFDEQ----------DNAGRSALHWACIGCLSGTGRTAVDLLLRWGASETALDTRGETPSDYLRRGAAA---VASSNVTPRNSEKMQREMQRALVLLARAPADRAWRRRCWLVMLRAR 401          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15213.3929.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LRS0_ECTSI3.090e-4573.33Ankyrin repeat protein n=1 Tax=Ectocarpus siliculo... [more]
D8LRZ8_ECTSI7.300e-4460.84Ankyrin repeat protein n=1 Tax=Ectocarpus siliculo... [more]
D8LS36_ECTSI9.210e-4270.00Ankyrin repeat protein n=1 Tax=Ectocarpus siliculo... [more]
A0A6H5KNQ1_9PHAE5.980e-4058.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K1F4_9PHAE1.310e-3830.25Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JY41_9PHAE1.570e-3743.28Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FXA8_ECTSI2.300e-3530.51Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JW91_9PHAE2.570e-3458.06Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LBP9_ECTSI1.450e-3362.61Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus si... [more]
D8LE08_ECTSI1.710e-3330.69Similar to ankyrin 2,3/unc44, partial n=1 Tax=Ecto... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig15213contigEcto-sp13_S_contig15213:2..2295 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score100.1
Seed ortholog evalue1.4e-18
Seed eggNOG ortholog2880.D7FSI6
Model size2294
KEGG koko:K21440
Hectar predicted targeting categoryother localisation
GOsGO:0001508,GO:0002027,GO:0002262,GO:0002376,GO:0002520,GO:0003008,GO:0003012,GO:0003013,GO:0003015,GO:0003205,GO:0003230,GO:0003279,GO:0003283,GO:0003674,GO:0005198,GO:0005200,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005783,GO:0005829,GO:0005856,GO:0005886,GO:0005911,GO:0005938,GO:0006725,GO:0006778,GO:0006779,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0006816,GO:0006873,GO:0006874,GO:0006875,GO:0006887,GO:0006888,GO:0006928,GO:0006936,GO:0006937,GO:0006941,GO:0006942,GO:0006996,GO:0007009,GO:0007010,GO:0007154,GO:0007163,GO:0007165,GO:0007267,GO:0007275,GO:0007507,GO:0008015,GO:0008016,GO:0008092,GO:0008093,GO:0008104,GO:0008150,GO:0008152,GO:0009058,GO:0009893,GO:0009987,GO:0010256,GO:0010468,GO:0010522,GO:0010604,GO:0010628,GO:0010638,GO:0010646,GO:0010880,GO:0010881,GO:0010882,GO:0010959,GO:0012505,GO:0014704,GO:0014731,GO:0015672,GO:0016020,GO:0016043,GO:0016192,GO:0016323,GO:0016528,GO:0016529,GO:0018130,GO:0019222,GO:0019438,GO:0019722,GO:0019725,GO:0019899,GO:0019900,GO:0019901,GO:0019932,GO:0022898,GO:0023051,GO:0023052,GO:0030001,GO:0030003,GO:0030011,GO:0030016,GO:0030017,GO:0030018,GO:0030029,GO:0030048,GO:0030054,GO:0030097,GO:0030099,GO:0030154,GO:0030218,GO:0030315,GO:0030424,GO:0030507,GO:0030673,GO:0030674,GO:0030863,GO:0031252,GO:0031253,GO:0031256,GO:0031430,GO:0031647,GO:0031672,GO:0031674,GO:0032409,GO:0032411,GO:0032412,GO:0032414,GO:0032501,GO:0032502,GO:0032589,GO:0032879,GO:0032940,GO:0032970,GO:0033013,GO:0033014,GO:0033036,GO:0033043,GO:0033267,GO:0033292,GO:0033365,GO:0034101,GO:0034394,GO:0034613,GO:0034641,GO:0034762,GO:0034764,GO:0034765,GO:0034767,GO:0035088,GO:0035090,GO:0035556,GO:0035637,GO:0036309,GO:0036371,GO:0042383,GO:0042391,GO:0042592,GO:0042692,GO:0042995,GO:0043005,GO:0043034,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043266,GO:0043268,GO:0043269,GO:0043270,GO:0043292,GO:0044057,GO:0044093,GO:0044237,GO:0044249,GO:0044271,GO:0044291,GO:0044304,GO:0044325,GO:0044422,GO:0044424,GO:0044425,GO:0044444,GO:0044448,GO:0044449,GO:0044456,GO:0044459,GO:0044463,GO:0044464,GO:0045197,GO:0045199,GO:0045202,GO:0045211,GO:0046483,GO:0046903,GO:0046907,GO:0048193,GO:0048468,GO:0048513,GO:0048518,GO:0048522,GO:0048534,GO:0048731,GO:0048821,GO:0048856,GO:0048869,GO:0048872,GO:0048878,GO:0050789,GO:0050794,GO:0050801,GO:0050821,GO:0050896,GO:0051049,GO:0051050,GO:0051117,GO:0051128,GO:0051130,GO:0051179,GO:0051186,GO:0051188,GO:0051234,GO:0051239,GO:0051270,GO:0051279,GO:0051282,GO:0051641,GO:0051649,GO:0051716,GO:0051899,GO:0051924,GO:0051928,GO:0055001,GO:0055065,GO:0055072,GO:0055074,GO:0055076,GO:0055080,GO:0055082,GO:0055117,GO:0060047,GO:0060048,GO:0060090,GO:0060255,GO:0060306,GO:0060307,GO:0060341,GO:0061024,GO:0061061,GO:0061245,GO:0061337,GO:0061515,GO:0065007,GO:0065008,GO:0065009,GO:0070252,GO:0070296,GO:0070727,GO:0070838,GO:0070972,GO:0071704,GO:0071840,GO:0071944,GO:0072359,GO:0072503,GO:0072507,GO:0072511,GO:0072657,GO:0072659,GO:0086001,GO:0086002,GO:0086003,GO:0086004,GO:0086005,GO:0086010,GO:0086012,GO:0086014,GO:0086015,GO:0086018,GO:0086019,GO:0086026,GO:0086046,GO:0086065,GO:0086066,GO:0086070,GO:0086091,GO:0090257,GO:0097060,GO:0097458,GO:0098590,GO:0098771,GO:0098794,GO:0098900,GO:0098901,GO:0098907,GO:0098910,GO:0099080,GO:0099081,GO:0099512,GO:0099568,GO:0099623,GO:0120025,GO:0120038,GO:1901016,GO:1901018,GO:1901019,GO:1901021,GO:1901360,GO:1901362,GO:1901379,GO:1901381,GO:1901564,GO:1901566,GO:1901576,GO:1903115,GO:1903169,GO:1903522,GO:1903779,GO:1904062,GO:1904064,GO:1904427,GO:1990778,GO:2001257,GO:2001259
Exons1
EggNOG free text desc.response to abiotic stimulus
EggNOG OGsCOG0666@1,KOG4177@2759
Cds size678
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko04131
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462809.808954-UTR-Ecto-sp13_S_contig15213:1..6571681462809.808954-UTR-Ecto-sp13_S_contig15213:1..657Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig15213 2..657 +
1681462809.831371-UTR-Ecto-sp13_S_contig15213:1335..22951681462809.831371-UTR-Ecto-sp13_S_contig15213:1335..2295Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig15213 1336..2295 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462809.8216202-CDS-Ecto-sp13_S_contig15213:657..13351681462809.8216202-CDS-Ecto-sp13_S_contig15213:657..1335Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig15213 658..1335 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig15213.3929.1prot_Ecto-sp13_S_contig15213.3929.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig15213 658..1335 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig15213.3929.1

>prot_Ecto-sp13_S_contig15213.3929.1 ID=prot_Ecto-sp13_S_contig15213.3929.1|Name=mRNA_Ecto-sp13_S_contig15213.3929.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=226bp
MGGVEWSLTVVETLLQTGADVNVRRRPNGISALDNAATAGHVSILKAILE
HGVDVDSCDGDGCLTLHRTAKSNQVSAIDAVVEAWANTERKSIEGRTPLF
YTTLFNKKSKAMPTLLRHGAIASTFDDLGLTPLNQVYFRKYPGLEWNMDL
LLRWGAAETALDNNGETPGTKLDELPPAGIGGSLTDVERVRLLLKYPRPG
RQSLASTVLDGHASFPLYEGRGKRL*
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mRNA from alignment at Ecto-sp13_S_contig15213:2..2295+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig15213.3929.1 ID=mRNA_Ecto-sp13_S_contig15213.3929.1|Name=mRNA_Ecto-sp13_S_contig15213.3929.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2294bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15213:2..2295+ (Ectocarpus species13 EcNAP12_S_4_19m)
AGCACACACGCGGCATTACAGATGCATCTCTTTCCCAAGCGCGCGTCCCT CCGAGGATTCGAGAGCGAGATCTTCAAGCTTGTTTCGTACGGTGCAACTC CGCAGCAGTGGGCGGAGTGGCTTCGGGTACCTCTCGGGCATGCCGCCGGA CGCGGCAACCTGGATCTGGTGAACATGCTGATCGAGGCTGGGGCTGACGG GAGCGCGTGATGGAGGGGGTGCCGAGGTCGCACTCTGCTCGACGCGGCTG CTCTCGGAGGAAGCGCGGGCGTGATCGCTGCCCTGCTTCGCGCAGGAGCT CGGCCGGACGTGAAGGTTGTGTCCATGTCCCCGAAGAGATCGGCTCTGTA CGTGTCAACACTGTGCAGCCACGTACATGCGCGAGAAGTTTGCTTCTCGC TGGGGCGGATGTGAACTTTAAGGACCCCATGCGTCGGTGTGGCGTCCTGC ACGAGGTCGCGGTCAGAGGGCACGAACAACTGGTGAACGACTTGTTGATA GGTGGTGCAGATCCACAGCTGCGTGGAGGATGGTTCAACTGCTCTTCTGT CTGCACGAAGCTGCCCGAGAAGGGCAGCTGGAGATCGTGTCCCATTTATT ATTGCTCGGGATGGTGACAAGCATGCTCTTGATTGCGACGGCGATTCGGC GCTGATATGGGCGGCGTGGAATGGTCTTTGACCGTAGTTGAGACTCTTCT ACAGACTGGTGCCGATGTCAACGTTCGGAGGCGTCCAAACGGCATCTCGG CGCTCGACAACGCTGCTACGGCTGGGCATGTTTCTATCCTCAAAGCGATC CTTGAACACGGGGTAGATGTGGATTCTTGCGATGGTGACGGGTGTCTCAC CCTCCATCGTACAGCTAAATCCAATCAGGTGAGTGCTATAGATGCAGTCG TCGAGGCCTGGGCGAACACCGAGCGCAAGTCGATCGAAGGGCGGACACCG CTGTTCTACACCACATTGTTCAACAAAAAAAGCAAAGCGATGCCAACTCT TTTGCGACATGGAGCTATCGCTAGCACCTTTGATGATCTCGGACTCACGC CACTGAACCAGGTTTACTTTCGCAAGTACCCCGGCCTAGAGTGGAACATG GATCTGCTGTTGCGATGGGGAGCGGCGGAGACAGCCTTGGACAACAACGG GGAGACACCGGGGACGAAGCTCGATGAACTTCCACCTGCTGGCATCGGCG GCTCCCTAACTGATGTCGAGCGCGTACGACTTTTACTAAAATACCCGCGC CCCGGCAGACAGAGCTTGGCGTCGACGGTGTTGGATGGTCATGCTTCGTT CCCGCTGTACGAAGGCAGAGGCAAACGGCTATGACGTCGGTGGCGAGACC CGCGTTTATTCAAACCAAGCAGGCGGCCGACCAGGAAAGAGCTTGAAAAA TGACAATACTGACGGTAAAGGAGCCCTTGGACACCATCATGACATCAATG GGCAACCTTGCAAATACGGTGGTAAAGTTGGAACTGGAGGTGGAGCTAAG CGTGCGGGGCTGAGCGGTATCGTAACGTTTCCGGTGGATCTTGAGGTGAA AGACGCGTTCCACACGGTTGTGGGCTTCATGTGAAGGCGAGCTCCAGACG AAGCATGTTTGGTCGTCGGCCTGGACATACACCCTTGGACCGCTACCGGT ACCATTGGGTGAGCTGCTGTGTGTCCGTGATGATGGATGCTTTTCTGAGG GCCGCTCGCCTTTTGGACGTTTGGACTCTGTACATAAGGCACGACTGCGA GACAACAGGACGGGCGGTGATTTACTGATTCAATTTCCTCAGCATTCATT TGGAATTTCATCAAGAAACTGCTCTCGCCCATAGTCAAAATTTGTGTCAA GCAGGTGACTACATGTAGTCTCAATCCGGAGGTTTCCGTGCGGATCACTA GTGCTTTAGAGGTTGGCGAACGTCCCCGTATCGCAGCATACTGTTTGTGT CTGGTGGCTACCGTGGAATGGTGCAGCATGCGTGAACAACCCGAGTTTCT GCGACCGTGTGGTGTTGGCGTTGGGCGTAATTTGGTCGATTCGTGGCTGC ACTGGGTGTGAGAGGTGTGCTACTGTAGGAATATGAGGTGTGACATGACT GGCTGGTACATATACTTCGCGCACGGTCTTGAGTGGTTTTTGCAACCTGA CGTACAGCAGGGTGTGTCCTGTGTGTGCATCTTCATTGAAGTGAAAGCGA CGGCTTCGTAGAATTCAAGTATGCAGTGTACTGAGATGCATGATGCAATC AGTCAGCACAAGCAACGTGGTACTTAAAGATCTCATGCGCCAGC
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig15213:2..2295+

>mRNA_Ecto-sp13_S_contig15213.3929.1 ID=mRNA_Ecto-sp13_S_contig15213.3929.1|Name=mRNA_Ecto-sp13_S_contig15213.3929.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=678bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15213:2..2295+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGGCGGCGTGGAATGGTCTTTGACCGTAGTTGAGACTCTTCTACAGAC
TGGTGCCGATGTCAACGTTCGGAGGCGTCCAAACGGCATCTCGGCGCTCG
ACAACGCTGCTACGGCTGGGCATGTTTCTATCCTCAAAGCGATCCTTGAA
CACGGGGTAGATGTGGATTCTTGCGATGGTGACGGGTGTCTCACCCTCCA
TCGTACAGCTAAATCCAATCAGGTGAGTGCTATAGATGCAGTCGTCGAGG
CCTGGGCGAACACCGAGCGCAAGTCGATCGAAGGGCGGACACCGCTGTTC
TACACCACATTGTTCAACAAAAAAAGCAAAGCGATGCCAACTCTTTTGCG
ACATGGAGCTATCGCTAGCACCTTTGATGATCTCGGACTCACGCCACTGA
ACCAGGTTTACTTTCGCAAGTACCCCGGCCTAGAGTGGAACATGGATCTG
CTGTTGCGATGGGGAGCGGCGGAGACAGCCTTGGACAACAACGGGGAGAC
ACCGGGGACGAAGCTCGATGAACTTCCACCTGCTGGCATCGGCGGCTCCC
TAACTGATGTCGAGCGCGTACGACTTTTACTAAAATACCCGCGCCCCGGC
AGACAGAGCTTGGCGTCGACGGTGTTGGATGGTCATGCTTCGTTCCCGCT
GTACGAAGGCAGAGGCAAACGGCTATGA
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