mRNA_Ecto-sp13_S_contig1519.3910.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1519.3910.1 vs. uniprot
Match: A0A7S3XZ48_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XZ48_HETAK) HSP 1 Score: 128 bits (322), Expect = 1.160e-35 Identity = 55/87 (63.22%), Postives = 70/87 (80.46%), Query Frame = 1
Query: 4 GVPADVRDSHGNTILIVACQNGHKRALKAALRHGADPDASNARGNTALHYCYAFGYEGTLGRYLMDKGADSSIRNRNGLVCYEGISR 264
G+P ++RD +GNT+L VACQNGHKRA KAALR GAD +A N RGNT LH+C+ +GY TLG+YL+ KGAD +IRN +G+ CYEGI +
Sbjct: 38 GMPVNIRDQYGNTVLCVACQNGHKRAAKAALRRGADINARNYRGNTPLHFCFTYGYGETLGQYLISKGADPTIRNNDGVTCYEGIRK 124
BLAST of mRNA_Ecto-sp13_S_contig1519.3910.1 vs. uniprot
Match: A0A7S2MBB0_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MBB0_9STRA) HSP 1 Score: 120 bits (300), Expect = 4.340e-31 Identity = 51/86 (59.30%), Postives = 67/86 (77.91%), Query Frame = 1
Query: 1 RGVPADVRDSHGNTILIVACQNGHKRALKAALRHGADPDASNARGNTALHYCYAFGYEGTLGRYLMDKGADSSIRNRNGLVCYEGI 258
+G+P ++RD GNTIL ++CQNG+KR KAALR GA+ +A N RGNT LH+CY +GY TLG+YL+ KG D+SI NR GL C+EG+
Sbjct: 141 QGIPVNIRDKTGNTILAISCQNGNKRVAKAALRRGANINAQNYRGNTPLHFCYTYGYGDTLGQYLISKGGDTSILNRAGLTCFEGL 226
BLAST of mRNA_Ecto-sp13_S_contig1519.3910.1 vs. uniprot
Match: D8LT35_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT35_ECTSI) HSP 1 Score: 119 bits (299), Expect = 1.070e-30 Identity = 55/56 (98.21%), Postives = 56/56 (100.00%), Query Frame = 1
Query: 1 RGVPADVRDSHGNTILIVACQNGHKRALKAALRHGADPDASNARGNTALHYCYAFG 168
+GVPADVRDSHGNTILIVACQNGHKRALKAALRHGADPDASNARGNTALHYCYAFG
Sbjct: 194 QGVPADVRDSHGNTILIVACQNGHKRALKAALRHGADPDASNARGNTALHYCYAFG 249
BLAST of mRNA_Ecto-sp13_S_contig1519.3910.1 vs. uniprot
Match: A0A5A8E191_CAFRO (Uncharacterized protein n=5 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8E191_CAFRO) HSP 1 Score: 120 bits (302), Expect = 1.290e-30 Identity = 56/86 (65.12%), Postives = 65/86 (75.58%), Query Frame = 1
Query: 1 RGVPADVRDSHGNTILIVACQNGHKRALKAALRHGADPDASNARGNTALHYCYAFGYEGTLGRYLMDKGADSSIRNRNGLVCYEGI 258
RGVP D+ D+HGNTILIVACQNG KR K ALR G D DA N+RGNTALH+CYA+GY LG YL+ KGAD + RN G + +EGI
Sbjct: 219 RGVPVDIADAHGNTILIVACQNGLKRVAKLALRRGCDIDARNSRGNTALHFCYAYGYGEGLGAYLVSKGADPAARNDAGFLPHEGI 304
BLAST of mRNA_Ecto-sp13_S_contig1519.3910.1 vs. uniprot
Match: A0A7S1C915_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C915_9STRA) HSP 1 Score: 115 bits (287), Expect = 3.640e-30 Identity = 48/86 (55.81%), Postives = 65/86 (75.58%), Query Frame = 1
Query: 1 RGVPADVRDSHGNTILIVACQNGHKRALKAALRHGADPDASNARGNTALHYCYAFGYEGTLGRYLMDKGADSSIRNRNGLVCYEGI 258
RGVP ++RD HGNTIL +ACQNG K+ K ALR GAD + N +GNT LHYC+ +G+ TLG+Y++ KGAD ++RN GL C++G+
Sbjct: 48 RGVPVNLRDKHGNTILTIACQNGLKKMAKVALRAGADINTRNYKGNTPLHYCFTYGWGDTLGQYMLSKGADGTLRNDLGLTCFQGL 133
BLAST of mRNA_Ecto-sp13_S_contig1519.3910.1 vs. uniprot
Match: A0A0W8D3U4_PHYNI (Histone-lysine N-methyltransferase n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8D3U4_PHYNI) HSP 1 Score: 115 bits (287), Expect = 1.900e-29 Identity = 50/88 (56.82%), Postives = 69/88 (78.41%), Query Frame = 1
Query: 1 RGVPADVRDSHGNTILIVACQNGHKRALKAALRHGADPDASNARGNTALHYCYAFGYEGTLGRYLMDKGADSSIRNRNGLVCYEGISR 264
+GVP + RD+ GNT+L +ACQNG KR K ALR GA+ ++ N RGNTALH+C+A+GY +LG YL+ KGAD++I N +G+VCY GI++
Sbjct: 103 QGVPVNSRDAFGNTLLTIACQNGLKRITKLALRRGANINSQNNRGNTALHFCFAYGYGDSLGAYLISKGADTTIENDDGMVCYYGITQ 190
BLAST of mRNA_Ecto-sp13_S_contig1519.3910.1 vs. uniprot
Match: A0A1V9Z1N7_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z1N7_9STRA) HSP 1 Score: 114 bits (286), Expect = 2.180e-29 Identity = 49/86 (56.98%), Postives = 65/86 (75.58%), Query Frame = 1
Query: 1 RGVPADVRDSHGNTILIVACQNGHKRALKAALRHGADPDASNARGNTALHYCYAFGYEGTLGRYLMDKGADSSIRNRNGLVCYEGI 258
+G+P ++ D+HGN++L +ACQNG KR K LRHGA+ + N RGNT LHYC+A+GY TLG YL+ KGAD ++RN +GL CY GI
Sbjct: 98 KGLPVNLPDAHGNSLLTIACQNGLKRLAKMLLRHGANINLKNRRGNTPLHYCFAYGYGETLGAYLISKGADVTLRNEDGLECYYGI 183
BLAST of mRNA_Ecto-sp13_S_contig1519.3910.1 vs. uniprot
Match: G4Z035_PHYSP (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=G4Z035_PHYSP) HSP 1 Score: 114 bits (284), Expect = 7.860e-29 Identity = 50/88 (56.82%), Postives = 68/88 (77.27%), Query Frame = 1
Query: 1 RGVPADVRDSHGNTILIVACQNGHKRALKAALRHGADPDASNARGNTALHYCYAFGYEGTLGRYLMDKGADSSIRNRNGLVCYEGISR 264
+GVP + RD GNT+L +ACQNG KR K ALR GA+ ++ N RGNTALH+C+++GY +LG YL+ KGAD++I N +GLVCY GI++
Sbjct: 122 QGVPVNSRDQFGNTLLSIACQNGLKRIAKLALRRGANINSQNNRGNTALHFCFSYGYGDSLGAYLISKGADTTIENDDGLVCYYGIAQ 209
BLAST of mRNA_Ecto-sp13_S_contig1519.3910.1 vs. uniprot
Match: W2H644_PHYPR (Uncharacterized protein n=8 Tax=Phytophthora TaxID=4783 RepID=W2H644_PHYPR) HSP 1 Score: 115 bits (287), Expect = 9.910e-29 Identity = 50/88 (56.82%), Postives = 69/88 (78.41%), Query Frame = 1
Query: 1 RGVPADVRDSHGNTILIVACQNGHKRALKAALRHGADPDASNARGNTALHYCYAFGYEGTLGRYLMDKGADSSIRNRNGLVCYEGISR 264
+GVP + RD+ GNT+L +ACQNG KR K ALR GA+ ++ N RGNTALH+C+A+GY +LG YL+ KGAD++I N +G+VCY GI++
Sbjct: 176 QGVPVNSRDAFGNTLLTIACQNGLKRITKLALRRGANINSQNNRGNTALHFCFAYGYGDSLGAYLISKGADTTIENDDGMVCYYGITQ 263
BLAST of mRNA_Ecto-sp13_S_contig1519.3910.1 vs. uniprot
Match: H3GFG3_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GFG3_PHYRM) HSP 1 Score: 114 bits (284), Expect = 1.250e-28 Identity = 50/88 (56.82%), Postives = 68/88 (77.27%), Query Frame = 1
Query: 1 RGVPADVRDSHGNTILIVACQNGHKRALKAALRHGADPDASNARGNTALHYCYAFGYEGTLGRYLMDKGADSSIRNRNGLVCYEGISR 264
+GVP + RD+ GNT+L +ACQNG KR K ALR GA+ + N RGNTALH+C+A+GY +LG YL+ KGAD++I N +G+VCY GI++
Sbjct: 141 QGVPVNSRDAFGNTLLSIACQNGLKRIAKLALRRGANINCQNNRGNTALHFCFAYGYGDSLGAYLISKGADTTIENDDGVVCYYGIAQ 228 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1519.3910.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1519.3910.1 >prot_Ecto-sp13_S_contig1519.3910.1 ID=prot_Ecto-sp13_S_contig1519.3910.1|Name=mRNA_Ecto-sp13_S_contig1519.3910.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=89bp RGVPADVRDSHGNTILIVACQNGHKRALKAALRHGADPDASNARGNTALHback to top mRNA from alignment at Ecto-sp13_S_contig1519:1224..2687+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1519.3910.1 ID=mRNA_Ecto-sp13_S_contig1519.3910.1|Name=mRNA_Ecto-sp13_S_contig1519.3910.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1464bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1519:1224..2687+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1519:1224..2687+ >mRNA_Ecto-sp13_S_contig1519.3910.1 ID=mRNA_Ecto-sp13_S_contig1519.3910.1|Name=mRNA_Ecto-sp13_S_contig1519.3910.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=267bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1519:1224..2687+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |