mRNA_Ecto-sp13_S_contig15160.3890.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig15160.3890.1
Unique NamemRNA_Ecto-sp13_S_contig15160.3890.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig15160.3890.1 vs. uniprot
Match: A0A6H5KQV0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQV0_9PHAE)

HSP 1 Score: 486 bits (1250), Expect = 8.050e-165
Identity = 299/437 (68.42%), Postives = 340/437 (77.80%), Query Frame = 2
Query:   32 MPEVPRIQQWPRGPTNPLHHAADCGSFEAAAAVVASGAFDIDQGNEFGWTALMMASRGGHSRIVRMLLIKGAQVLIANDLDTXXXXXXXXXXXXXXXXXXXXAGAPLEAVTKEQLWTPLHIAARNGCAESITTLLDAGANLNSRQSDGATPLYTAALQGNVNAFRLLLVAKADPLLTCAPDSPEDVFLPLDAAAVKGHAEVVHELIRQVGIDGCGGSSGGEHALQQAALSRHLDIMAILTNAGVVDTSGLALRMAAGFGGEAPVQFLLEQARARKTMDLLAYVNARDCCGMTPLLCAVRSHGPCSPRVVRLLAEAGADTTSAVVVCSQPEEDGFSITPLGFTVGFLRHKVAGTGTSPKEQLNELEAIRRLLLRVEAVHAVSWLWPSDISTITHATAKGTDRTTVTSTAGTP-PMLMMRRRTRVREVPLAALLRYSSK 1339
            M  VP  QQWP GP+NPL  AADCGSF+ AA ++ASGAFDIDQGNE GWT LMMASRGG+ RIVRMLL KGAQV + +    XXXXXXXXXXXXXXXXXXXX  A L+A TK+   TPL  AA  GCA S+T LL AG+N+N+R+SDGATPLYTAA  GNV A  LLL+AKADPLLTCA DS ++ FLPLD AA  GH EVV+ELIRQVGIDGCGGSSGGE+AL+QAAL   LDIMAILT+AGVVDT GLAL +AAG+GGEAP++FLLEQAR RK+ D  AY+N  +  G+T LL  ++    C PRVV+LL EAGADTTS V++C+QP ED F ITPLG T+  L  + A   T   E+ N+LE IRRLLLR EAVHAVSWLWPSD  TITHATAKGT RTT TSTA TP  MLM+ RRTR R+  LAALLRYSSK
Sbjct:    1 MRGVPLPQQWPHGPSNPLQAAADCGSFKTAANLLASGAFDIDQGNEVGWTPLMMASRGGYPRIVRMLLNKGAQVWVTDXXXXXXXXXXXXXXXXXXXXXXXXXXALLDAATKQNHCTPLDCAAETGCAASVTALLKAGSNINTRRSDGATPLYTAAWNGNVVAVWLLLLAKADPLLTCASDSGKERFLPLDVAAQNGHREVVNELIRQVGIDGCGGSSGGENALRQAALFSRLDIMAILTDAGVVDT-GLALVVAAGYGGEAPLKFLLEQARGRKSTDRAAYMNTLNGVGLTSLLDGIQR---CRPRVVQLLVEAGADTTSPVLICNQPGEDDFHITPLGLTMCLLGGRSAKPLTM--EEQNKLEVIRRLLLREEAVHAVSWLWPSDTPTITHATAKGTGRTTATSTAATPFIMLMIGRRTRGRKGLLAALLRYSSK 431          
BLAST of mRNA_Ecto-sp13_S_contig15160.3890.1 vs. uniprot
Match: A0A6H5KJA9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJA9_9PHAE)

HSP 1 Score: 477 bits (1228), Expect = 9.490e-162
Identity = 297/439 (67.65%), Postives = 332/439 (75.63%), Query Frame = 2
Query:   32 MPEVPRIQQWPRGPTNPLHHAADCGSFEAAAAVVASGAFDIDQGNEFGWTALMMASRGGHSRIVRMLLIKGAQVLIANDLDTXXXXXXXXXXXXXXXXXXXXAGAPLEAVTKEQLWTPLHIAARNGCAESITTLLDAGANLNSRQSDGATPLYTAALQGNVNAFRLLLVAKADPLLTCAPDSPEDVFLPLDAAAVKGHAEVVHELIRQVGIDGCGGSSGGEHALQQAALSRHLDIMAILTNAGVVDTSGLALRMAAGFGGEAPVQFLLEQARARKTMDLLAYVNARDCCGMTPLLCAVRSHGPCSPRVVRLLAEAGADTTSAVVVCSQPEEDGFSITPLGFTVGFLRHKV--AGTGTSPKEQLNELEAIRRLLLRVEAVHAVSWLWPSDISTITHATAKGTDRTTVTSTAGTPPMLMMRRRTRVREVPLAALLRYSSKP 1342
            MP VPR QQ PRGP+N LH AA+CGSFEA A V+ASGAFDIDQGNE+GWTALM+ASRGG++RIV M+L KGAQV I      XXXXXXXXXXXXXXXXXXXX   P+EA T + L                        NLNSR+SDGATPLYTAA +GNV+A RLLL+AKADPLLT  PD     FLPLDAAA  GH EVV+ELIRQVGIDGCGGSSGG  ALQQAA  ++L+IM ILTNAGVVDT GLAL +AAG+GGE P++FLLEQARARKTMD  AYVN RD  G+TPLL  ++ +    PRVVRLL EAGADTTS V V +Q   D  SITPLG T+  +R KV   G G +  EQL++LEAIRRLLLRVEAVHAVSWLWPSDISTIT A A+GTDRTT  STA T PML+ RRR R R+VPLAALLRYSSKP
Sbjct:    1 MPRVPRPQQRPRGPSNRLHAAAECGSFEATATVLASGAFDIDQGNEYGWTALMLASRGGYARIVGMILNKGAQVSITXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVEATTTQHLCXXXXXXXXXXXXXXXXXXXXXXXNLNSRRSDGATPLYTAAWKGNVDAARLLLLAKADPLLTTVPDPSGRTFLPLDAAAENGHPEVVNELIRQVGIDGCGGSSGGVRALQQAAQFKNLNIMVILTNAGVVDT-GLALVVAAGYGGETPLKFLLEQARARKTMDEAAYVNTRDRGGVTPLLWGIQHY---RPRVVRLLVEAGADTTSPVAVRNQLGGDDVSITPLGLTMNPVRDKVKVVGRGPASPEQLHKLEAIRRLLLRVEAVHAVSWLWPSDISTITRAAARGTDRTTAISTAVTLPMLVTRRRARGRKVPLAALLRYSSKP 435          
BLAST of mRNA_Ecto-sp13_S_contig15160.3890.1 vs. uniprot
Match: D7FXY7_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXY7_ECTSI)

HSP 1 Score: 325 bits (832), Expect = 1.310e-103
Identity = 199/337 (59.05%), Postives = 232/337 (68.84%), Query Frame = 2
Query:  338 AGAPLEAVTKEQLWTPLHIAARNGCAESITTLLDAGANLNSRQSDGATPLYTAALQGNVNAFRLLLVAKADPLLTCAPDSPEDVFLPLDAAAVKGHAEVVHELIRQVGIDGCGGSSGGEHALQQAALSRHLDIMAILTNAGVVDTSGLALRMAAGFGGEAPVQFLLEQARARKTMDLLAYVNARDCCGMTPLLCAVRSHGPCSPRVVRLLAEAGADTTSAVVVCSQPEEDGFSITPLGFTVGFLRHKVAGTGTSPKEQLNELEAIRRLLLRVEAVHAVSWLWPSDISTITHATAKGTDRTTVTSTAGTPPMLMMRRRTRV--REVPLAALLRYSSKP 1342
            AGAPLE  TK+QL TPL IAA NGCA S+TTLL+AGANLNSR+ DGATPL+ AA +GNV+A RLLL+AK DPLLT    + E   LPLD AA  GH EVV+ELIRQVGI GCGGSSGG  ALQQAA ++HLD++ +LTNAGVVDT GLA        G  P++  +   +  +             C    + C    H  C PRVVRLL EAGADTTS V +   P  D  +ITP+G T+  L H + GT    +EQLN LEAI RLLLRVEA+HAVSWLW SDI   T++TA+GTDRTT  STAGTP +L MR+R R   REVPLAALLRYSSKP
Sbjct:    5 AGAPLEVATKQQLCTPLQIAAVNGCAASMTTLLEAGANLNSRRFDGATPLFLAAWEGNVDAVRLLLLAKVDPLLTPHLGTSERASLPLDVAAGLGHLEVVNELIRQVGIGGCGGSSGGVRALQQAARNKHLDMLTVLTNAGVVDT-GLARGRRIWRRG--PLEVSVGAGKGEENHGWTCVCEHPQRCRFDAIACW---HQRCRPRVVRLLVEAGADTTSTVPIDGLPGTD--NITPMGLTM-LLLHDL-GTEPLTEEQLNALEAIHRLLLRVEALHAVSWLWSSDICNCTYSTAQGTDRTTSKSTAGTPLVLTMRQRARSKEREVPLAALLRYSSKP 331          
BLAST of mRNA_Ecto-sp13_S_contig15160.3890.1 vs. uniprot
Match: D7FT11_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT11_ECTSI)

HSP 1 Score: 259 bits (662), Expect = 7.670e-76
Identity = 188/431 (43.62%), Postives = 233/431 (54.06%), Query Frame = 2
Query:   77 NPLHHAADCGSFEAAAAVVASGAFDIDQGNEFGWTALMMASRGGHSRIVRMLLIKGAQVLIANDLD-TXXXXXXXXXXXXXXXXXXXXAGAPLEAVTKEQLWTPLHIAARNGCAESITTLLDAGANLNSRQSDGATPLYTAALQGNVNAFRLLLVAKADPLLTCAPDSPEDVFLPLDAAAVKGHAEVVHELIRQVGIDGCGGSSGGEHALQQAALSRHLDIMAILTNAGVVDTSGLALRMAAGFGGEAPVQFLLEQARARKTMDLL-AYVNARDCCGMTPLLCAVRSHGPCSPRVVRLLAEAGADTTSAVVVCSQPEEDGFSITPLGFTVGFLRHKVAGTGT-SPKEQLNELEAIRRLLLRVEAVHAVSWLWPSDISTITHATAKGTDRTTVTSTAGTPPM----LMM---RRRTRVREVPLAALLRYSSK 1339
            N LH A   GS E   AV+A G  +IDQ N +G T LMMA   GHSRI +ML+ KGA V IA+    T                    AGA L+A+   +   PLH A  +              N + +  DG+T L+ AA +G V   R LL   A+PLL           +PLD AA  GH +VV ELI+++GI+GC  +S G HAL  AA ++HLDIMAILT AGVVDT G AL +AAG G EA V+FLL          +  AY+NARD  G TPL+   +     +PR+VR+L +AGADTTS V V +      F+ TPL FT   LR K+   G  + KE L  LEAI RLLLRV+AVHAVSWLWPS    I  AT           T   PP+    LM+   +RRT+ R   +A LLRYS K
Sbjct:  107 NQLHRAVLVGSAELTQAVLAGGTVEIDQRNSYGATPLMMAVHNGHSRIAKMLIKKGANVSIADKRGFTALHFCCAREEDDAIVKLLAKAGADLDAIIPGEGSAPLHRATHHEXXXXXXXXXXXXXNPDCQLPDGSTALHIAAEEGQVAVMRELLRGNANPLLIQTSPPGNTTTVPLDLAAKHGHTDVVRELIQELGIEGCDATSAGAHALAFAASNQHLDIMAILTEAGVVDT-GKALYLAAGMGHEASVKFLLRHRHKEGGCGVEGAYLNARDVNGYTPLVVCTQGCFSQAPRIVRMLVDAGADTTSPVQVMNLKGGVVFNDTPLAFTKLRLRKKIVADGKPATKEHLQRLEAICRLLLRVDAVHAVSWLWPSGAPFIGRAT----------ETDPEPPLPALKLMLPILKRRTKRRCGLVATLLRYSVK 526          
BLAST of mRNA_Ecto-sp13_S_contig15160.3890.1 vs. uniprot
Match: D7FSU4_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSU4_ECTSI)

HSP 1 Score: 248 bits (632), Expect = 2.760e-74
Identity = 187/436 (42.89%), Postives = 210/436 (48.17%), Query Frame = 2
Query:   32 MPEVPRIQQWPRGPTNPLHHAADCGSFEAAAAVVASGAFDIDQG-NEFGWTALMMASRGGHSRIVRMLLIKGAQVLIANDLDTXXXXXXXXXXXXXXXXXXXXAGAPLEAVTKEQLWTPLHIAARNGCAESITTLLDAGANLNSRQSDGATPLYTAALQGNVNAFRLLLVAKADPLLTCAPDSPEDVFLPLDAAAVKGHAEVVHELIRQVGIDGCGGSSGGEHALQQAALSRHLDIMAILTNAGVVDTSGLALRMAAGFGGEAPVQFLLEQARARKTMDLLAYVNARDCCGMTPLLCAVRSHGPCSPRVVRLLAEAGADTTSAVVVCSQPEEDGFSITPLGFTVGFLRHKVAGTGTSP--KEQLNELEAIRRLLLRVEAVHAVSWLWPSDISTITHATAKGTDRTTVTSTAGTPPMLMMRRRTRVREVPLAALLRY 1330
            MP+VP+ QQWPRGP N LH AAD G FE AAA++AS AFDID G +E GWTALM+AS  G+S IVRMLL KGAQV IA+                        AGAPLE  TK+ L TPLH+AA NGC ESITT L+A                                           D P     PLD AA  GHAEVV ELIRQ                                                                                            H  C PRV +LL EAGADTTSAV V     +D  S+TPLG T+  L     G  T P  +EQL +L+AIRRLLLRVEAVHAVSWLW +DISTITH+TA GTDRT  TST GTP MLMMRRRT+ REVPL+ALLR+
Sbjct:    1 MPQVPQPQQWPRGPKNSLHEAADYGFFETAAALLASDAFDIDLGEDEGGWTALMIASHRGYSLIVRMLLSKGAQVSIADVHGDSGLHLSVLAGHMAVTKTLVEAGAPLEVATKQLLCTPLHLAADNGCIESITTSLEA-------------------------------------------DVP-----PLDMAAQNGHAEVVQELIRQ--------------------------------------------------------------------------------------------H--CRPRVGQLLVEAGADTTSAVPVSKHFGKD--SVTPLGLTMRLLD----GRSTYPLTEEQLKKLKAIRRLLLRVEAVHAVSWLWSTDISTITHSTAHGTDRTIATSTTGTPLMLMMRRRTKRREVPLSALLRW 288          
BLAST of mRNA_Ecto-sp13_S_contig15160.3890.1 vs. uniprot
Match: A0A6H5JMS6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMS6_9PHAE)

HSP 1 Score: 245 bits (626), Expect = 2.070e-73
Identity = 174/334 (52.10%), Postives = 203/334 (60.78%), Query Frame = 2
Query:  338 AGAPLEAVTKEQLWTPLHIAARNGCAESITTLLDAGANLNSRQSDGATPLYTAALQGNVNAFRLLLVAKADPLLTCAPDSPEDVFLPLDAAAVKGHAEVVHELIRQVGIDGCGGSSGGEHALQQAALSRHLDIMAILTNAGVVDTSGLALRMAAGFGGEAPVQFLLEQARARKTMDLLAYVNARDCCGMTPLLCAVRSHGPCSPRVVRLLAEAGADTTSAVVVCSQPEEDGFSITPLGFTVGFLRHKVAGTGTSPKEQLNELEAIRRLLLRVEAVHAVSWLWPSDISTITHATAKGTDRTTVTSTAGTPPMLMMRRRTRVR---EVPLAALLRY 1330
            AGAPLE  TK+QL TPLH+AA NGCA S  T+L AGAN NSR+ DGA+  +    +G     R +  +                 LP D A   GH EVV+ELIRQVGI GCGGSSGG  ALQQAA ++ LD++ +LT+AGVVDT GLALR AA FGG AP++FLLEQARARKTM   A   A + CG     C  +      PR           T   V   S P         +G T+  LR    GT    +EQLN LEAIRRLLLRVEAVHAVSWLW SDIST T++TA+GT RTT  ST GTP +L MR+R R R   EV LAALLR+
Sbjct:    5 AGAPLEVATKQQLCTPLHVAAVNGCAASTRTMLKAGANPNSRRFDGASRYFWRRGKG-----RWMRTS-----------------LPFDVAVDLGHLEVVNELIRQVGIGGCGGSSGGVRALQQAARNKPLDMLTVLTSAGVVDT-GLALR-AAAFGGVAPLKFLLEQARARKTMGGPADA-APELCG-----CLSKPERTRHPRFQ--------STAYLVRTTSHP--------CMGLTMLLLRD--LGTEPLTEEQLNALEAIRRLLLRVEAVHAVSWLWSSDISTFTYSTAQGTGRTTSKSTPGTPLVLTMRQRARSRRELEVLLAALLRW 290          
BLAST of mRNA_Ecto-sp13_S_contig15160.3890.1 vs. uniprot
Match: D7G1I8_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1I8_ECTSI)

HSP 1 Score: 234 bits (597), Expect = 7.650e-68
Identity = 194/434 (44.70%), Postives = 244/434 (56.22%), Query Frame = 2
Query:   41 VPRIQQWPRGPTNPLHHAADCGSFEAAAAVVASGAFDIDQGNEFGWTALMMASRGGHSRIVRMLLIKGAQVLIANDLDTXXXXXXXXXXXXXXXXXXXXAGAPLEAVTKEQLWTPLHIAARNGCAESITTLLDAGANLNSRQSDGATPLYTAALQGNVNAFRLLLVAKADPLLTCAPDSPEDVFLPLDAAAVKGHAEVVHELIRQVGIDGCGGSSGGEHALQQAALSRHLDIMAILTNAGVVDTSGLALRMAAGFGGEAPVQFLLEQARARKTMDLLAYVN-ARDCCGMTPLLCAVRSHGPCSPRVVRLLAEAGADTTSAVVVCSQPEEDGFSITPLGFTVGFLRHKVAGTGTSPKEQLNELEAIRRLLLRVEAVHAVSWLWPSDISTITHATAKGTDRTTVTSTAGTPPMLMMRRRTRVREVPLAALLRYSSK 1339
            +P  ++WPRGP N LH AAD GS +  AA+++SG  +I+QG+  GWT LM+AS+ G++RIVR+L+ +GA VLI  DL    XXXXXXXXXXXXXXXXX AGA LEA T      PLH+AA  G             NLNSR+ D AT                   AKADPLL     S  D F+PLDAAA KG + VV E + Q+GIDGCGG S G HAL  AA  + +D MA+L NAGVVDT G+AL  A     E  ++FLL Q + +      AYV+ ARD  G TPLLC++                               E++G     LG       ++V G   + +EQ ++L A+ RLLLRVEAVHA SWLW SD   I H TA+ T RT VT +  +    ++   TR R   L+A+LRYSSK
Sbjct:    3 MPAQEKWPRGPKNELHFAADTGSTQRTAAILSSGLININQGDPDGWTPLMVASQRGYTRIVRILVKEGANVLIVADLGFTAXXXXXXXXXXXXXXXXXNAGADLEAATSTNGSRPLHLAADKGHXXXXXXXXXXXXNLNSRRFDRATXXXXXXXXXXXXXXXXXXXAKADPLLIRLNVS-RDRFVPLDAAAGKGRSLVVREFLDQLGIDGCGGPSRGAHALYHAAKEQFVDTMAVLANAGVVDT-GIALIGAIKENREGSIKFLLRQQQLQGN-PTGAYVDEARDPFGRTPLLCSI-------------------------------EDEGLVDHYLG------ENRVIGRDIT-EEQAHKLNAVHRLLLRVEAVHAASWLWVSDAPDIAH-TAEVTKRTKVTPSPRSRMFPVLGLSTR-RNALLSAVLRYSSK 393          
BLAST of mRNA_Ecto-sp13_S_contig15160.3890.1 vs. uniprot
Match: A0A6H5JL33_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL33_9PHAE)

HSP 1 Score: 198 bits (504), Expect = 4.640e-54
Identity = 148/375 (39.47%), Postives = 193/375 (51.47%), Query Frame = 2
Query:   53 QQWPRGPTNPLHHAADCGSFEAAAAVVAS-GAFDIDQGNEFGWTALMMASRGGHSRIVRMLLIKGAQVLIANDLDTXXXXXXXXXXXXXXXXXXXXAGAPLEAVTKEQLWTPLHIAARNGCAESITTLLDAGANLNSRQSDGATPLYTAALQGNVNAFRLLLVAKADPLLTCAPDSPEDVFLPLDAAAVKGHAEVVHELIRQVGIDGCGGSSGGEHALQQAALSRHLDIMAILTNAGVVDTSGLALRMAAGFGGEAPVQFLLEQARARKTM-DLLAYVN-ARDCCGMTPLLCAV---RSHGPCSPRVVRLLAEAGADTTSAVVVCSQPEEDGFSITPLGFTVGFLRHKVAGTGTSPKEQLNELEAIRRLLLRVEA 1159
            Q WPRGP N LH AA+ GS E   A++AS  +  ID G E+GWT LM+A+  G SR+VR+LL KGA V +  +                   XXXX                  +AA  GC E                                        AKA+PLLT  P      F+PLD AA  G  EVV ELI+QV I GCGG+SGG +AL+ AALS+++D+M++L +AGV+DT G AL  AAG   EA V+ LL+Q        +L  YVN   D  G TPLLC++    +   CSPRVVRLL +AGADT SAV +     + G S+TP+ F    L   + G  T+ ++ +++L AI RL  +VEA
Sbjct:    9 QPWPRGPQNDLHRAANDGSVERVVALLASRSSIAIDAGAEYGWTPLMLAAWRGSSRVVRILLNKGANVSVVAEDGHTALHFSTQDGGHPVVTXXXXXXXXXXXXXXXXXXXXXXLAANAGCWEVAQVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAKANPLLT-KPTPSGVTFVPLDTAAEYGQTEVVRELIKQVSIKGCGGASGGVYALRLAALSQNVDVMSVLADAGVMDT-GEALITAAGRNDEAGVKLLLQQRHGTSAGGELYMYVNDTHDLVGRTPLLCSIDGGMAGFRCSPRVVRLLVDAGADTVSAVPLKGTAGQIGRSVTPIDFATCSLHENMDGGKTAMEKHVHKLRAIHRLFSQVEA 381          
BLAST of mRNA_Ecto-sp13_S_contig15160.3890.1 vs. uniprot
Match: D7FVK3_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVK3_ECTSI)

HSP 1 Score: 194 bits (493), Expect = 3.350e-52
Identity = 170/440 (38.64%), Postives = 210/440 (47.73%), Query Frame = 2
Query:   44 PRIQQWPRGPTNPLHHAADCGSFEAAAAVVASGAFDIDQGNEFGWTALMMASRGGHSRIVRMLLIKGAQVLIANDLDTXXXXXXXXXXXXXXXXXXXXAGAPLEAVTKEQLWTPLHIAARNGCAESITTLLDAGANLNSRQSDGATPLYTAALQGNVNAFRLLLVAKADPLLTCAPDSPEDVFLPLDAAAVKGHAEVVHELIRQVGIDGCGGSSGGEHALQQAALSRHLDIMAILTNAGVVDTSGLALRMAAGFGGEAPVQFLLEQARARKTMDLLAYVNA-RDCCGMTPLLCA--VRSHGPCSPRVVRLLAEAGADTTSAVVVCSQPEEDGFSITPLGFTVGFLRHKVAGTGTSPKEQLNELEAIRRLLLRVEAVHAVSWLWPSDISTITHATAKGTDRTTVTSTAGTPPML-----MMRRRTRVREVPLAALLRYSSK 1339
            P +QQ PR   N LH AA  GS    AA++++G+ DID G+  G T LM A    H  +V +LL KGA V   ND +               XXXXXX                                                                   AKA+PLLT    + +   LPLD AA  G   VV EL+++ GI GCGG +GG  ALQ AA+  H+D+M  LT AGVVDT G+AL  A  FG    V+FLL+Q     + +  AYV+  RD CG TPL+C   V  +  CSP+VVRLL +AGADTTS V    QP       TPL      LR K+A     P E L  LE IRRLLLRVEAVHA SWLW + +  +    A GT  T   S++ T P L     ++RRR R R    A+L RY+ K
Sbjct:    5 PLLQQSPRVVINKLHEAARDGSTWLTAAILSTGSIDIDGGDSSGGTPLMHAICNDHPSVVSILLSKGASVSAIND-EGNTALHLSAFAGYVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAKANPLLTRVNLAWQ--HLPLDTAAQNGRLGVVLELLQRFGIRGCGGGTGGVTALQLAAMKPHMDVMLALTTAGVVDT-GIALVKATSFGHMDVVKFLLQQQNGTPS-EKSAYVSRPRDPCGRTPLICNIDVGLNQSCSPKVVRLLVDAGADTTSIVRFTIQPGTLPVVCTPLSLATEALRIKIAYRKAIPDELLRRLELIRRLLLRVEAVHATSWLWQNGVPRV-GLPAGGTAATETESSSTTAPQLRTVLPILRRRARGRGFVSASLCRYAVK 438          
BLAST of mRNA_Ecto-sp13_S_contig15160.3890.1 vs. uniprot
Match: D7G1H7_ECTSI (EsV-1-199 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1H7_ECTSI)

HSP 1 Score: 189 bits (480), Expect = 2.070e-50
Identity = 186/442 (42.08%), Postives = 227/442 (51.36%), Query Frame = 2
Query:   41 VPRIQQWPRGPTNPLHHAADCGSFEAAAAVVAS-GAFDIDQGNEFGWTALMMASRGGHSRIVRMLLIKGAQVLIANDLDTXXXXXXXXXXXXXXXXXXXXAGAPLEAVTKEQLWTPLHIAARNGCAESITTLLDAGANLNSRQSDGATPLYTAALQGNVNAFRLLLVAKADPLLTCAPDSPEDVFLPLDAAAVKGHAEVVHELIRQVGIDGCGGSSGGEHALQQAALSRHLDIMAILTNAGVVDTSGLALRMAAGFGGEAPVQFLLEQARARKTMDLLAYVNA-RDCCGMTPLLCAVRSHGP--CSPRVVRLLAEAGADTTSAVVVCS-QPEEDGFSITPLGFTVGFLRHKVAGTGTSPKEQLNELEAIRRLLLRVEAVHAVSWLWPSDISTITHATAKGTDRTTVTSTAGTPPML----MMRRRTRVREVPLAALLRYSSK 1339
            +PR QQ  RGP N LH AA  GS E   A+++S GA DID GN    TALM+A+  G++ +V  LL KGA V        XXXXXXXXXXXXXXXXXXXX                                                               +LL AKA+PLL C+       ++PL+ AA+ G+ +V  E+IRQVGI GCGG SGG  AL+QAA   HL+ MA+L +AG V  +G AL +AA  G    V+FLL + +A    D  AYVN  RD  G TP++CAV       CSP++VRLL +AGA+TT AV V    P  +  S TPL FT   LR        + KEQL  L+  R LL R EAVHAVSWLW S       A A G  +T   STA   P+     M+RR+   R V L  L RYS K
Sbjct:    1 MPRPQQVTRGPMNALHKAAWDGSVEMTGAILSSRGAPDIDLGNPSAATALMIATVKGYAGVVNALLSKGANVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-XXXXXXXXXXXXXXXXXXXXXXVLLRAKANPLL-CSHTPMGVSYVPLEMAALHGNPDVAREMIRQVGIRGCGGPSGGVEALRQAADEEHLEFMAVLLDAGGVVDTGPALILAAENGRAVAVKFLLRRRQA----DADAYVNGTRDPYGRTPVMCAVDVGAGRLCSPKIVRLLVDAGANTTRAVGVTRITPRWEKTSETPLAFTTRLLREGRVDGEAATKEQLQRLKDTRCLLSRAEAVHAVSWLWASG-EPPRIAQAAGDTKTETASTAVATPLRAMSPMLRRKPGTRGVLLKTLFRYSRK 435          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15160.3890.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KQV0_9PHAE8.050e-16568.42Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KJA9_9PHAE9.490e-16267.65Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FXY7_ECTSI1.310e-10359.05EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
D7FT11_ECTSI7.670e-7643.62EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
D7FSU4_ECTSI2.760e-7442.89EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
A0A6H5JMS6_9PHAE2.070e-7352.10Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G1I8_ECTSI7.650e-6844.70EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
A0A6H5JL33_9PHAE4.640e-5439.47Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FVK3_ECTSI3.350e-5238.64EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
D7G1H7_ECTSI2.070e-5042.08EsV-1-199 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig15160contigEcto-sp13_S_contig15160:231..2783 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score329.7
Seed ortholog evalue2.1e-87
Seed eggNOG ortholog2880.D7FXY7
Model size1734
KEGG koko:K10334
Hectar predicted targeting categoryother localisation
Exons2
EggNOG free text desc.response to abiotic stimulus
EggNOG OGsCOG0666@1,KOG0504@2759
Cds size1323
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko04121
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462806.649967-UTR-Ecto-sp13_S_contig15160:230..2611681462806.649967-UTR-Ecto-sp13_S_contig15160:230..261Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig15160 231..261 +
1681462806.685574-UTR-Ecto-sp13_S_contig15160:2403..27831681462806.685574-UTR-Ecto-sp13_S_contig15160:2403..2783Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig15160 2404..2783 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462806.6593065-CDS-Ecto-sp13_S_contig15160:261..15561681462806.6593065-CDS-Ecto-sp13_S_contig15160:261..1556Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig15160 262..1556 +
1681462806.673429-CDS-Ecto-sp13_S_contig15160:2375..24031681462806.673429-CDS-Ecto-sp13_S_contig15160:2375..2403Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig15160 2376..2403 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig15160.3890.1prot_Ecto-sp13_S_contig15160.3890.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig15160 262..2403 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig15160.3890.1

>prot_Ecto-sp13_S_contig15160.3890.1 ID=prot_Ecto-sp13_S_contig15160.3890.1|Name=mRNA_Ecto-sp13_S_contig15160.3890.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=441bp
MPEVPRIQQWPRGPTNPLHHAADCGSFEAAAAVVASGAFDIDQGNEFGWT
ALMMASRGGHSRIVRMLLIKGAQVLIANDLDTTALHQSVLGGHLAVTKML
VEAGAPLEAVTKEQLWTPLHIAARNGCAESITTLLDAGANLNSRQSDGAT
PLYTAALQGNVNAFRLLLVAKADPLLTCAPDSPEDVFLPLDAAAVKGHAE
VVHELIRQVGIDGCGGSSGGEHALQQAALSRHLDIMAILTNAGVVDTSGL
ALRMAAGFGGEAPVQFLLEQARARKTMDLLAYVNARDCCGMTPLLCAVRS
HGPCSPRVVRLLAEAGADTTSAVVVCSQPEEDGFSITPLGFTVGFLRHKV
AGTGTSPKEQLNELEAIRRLLLRVEAVHAVSWLWPSDISTITHATAKGTD
RTTVTSTAGTPPMLMMRRRTRVREVPLAALLRYSSKPRPG*
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mRNA from alignment at Ecto-sp13_S_contig15160:231..2783+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig15160.3890.1 ID=mRNA_Ecto-sp13_S_contig15160.3890.1|Name=mRNA_Ecto-sp13_S_contig15160.3890.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2553bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15160:231..2783+ (Ectocarpus species13 EcNAP12_S_4_19m)
CTGTGCTCGGTGACTGTCGCCGGCCGACGAGATGCCCGAAGTGCCTCGCA TCCAGCAGTGGCCTCGTGGCCCTACGAATCCTTTGCACCATGCTGCCGAT TGTGGTTCTTTCGAGGCTGCAGCGGCCGTCGTTGCGAGCGGTGCTTTCGA CATTGATCAGGGCAATGAGTTCGGCTGGACCGCTCTCATGATGGCTTCCC GTGGAGGTCACTCCCGGATTGTCAGGATGCTTCTGATAAAGGGAGCACAG GTTTTGATAGCGAATGATCTGGACACCACTGCTTTGCACCAGTCCGTTTT GGGAGGACACCTGGCGGTGACCAAGATGCTGGTGGAAGCCGGTGCACCCC TCGAAGCAGTGACCAAAGAACAACTTTGGACGCCGCTTCACATTGCTGCT AGAAACGGGTGCGCGGAGTCCATAACAACATTGCTCGATGCCGGTGCGAA TCTGAACAGCCGTCAGTCGGATGGAGCAACACCGCTGTACACTGCGGCGT TGCAAGGGAACGTGAATGCGTTTAGGTTGCTACTTGTCGCGAAGGCAGAC CCACTCCTGACCTGCGCACCTGATTCGCCGGAAGATGTATTCCTCCCTTT GGACGCGGCGGCGGTAAAGGGACACGCGGAAGTGGTGCATGAGCTGATCC GGCAGGTGGGCATCGATGGATGTGGTGGCTCAAGCGGCGGGGAACATGCT CTCCAGCAGGCCGCACTTTCCAGGCATTTGGATATCATGGCCATTCTAAC GAATGCCGGAGTGGTAGACACATCAGGGTTAGCTCTGCGGATGGCCGCCG GATTTGGAGGCGAGGCCCCTGTGCAATTCCTGTTGGAGCAGGCAAGGGCG AGGAAAACAATGGATCTACTGGCGTACGTGAACGCCCGCGACTGTTGCGG TATGACTCCGTTGCTTTGTGCCGTTCGATCCCACGGGCCGTGTTCTCCCA GAGTTGTACGGTTGCTTGCCGAAGCCGGAGCGGACACGACATCCGCTGTT GTTGTCTGCAGCCAACCTGAGGAGGACGGTTTCAGCATCACACCCCTGGG CTTCACTGTGGGTTTCCTCCGTCATAAGGTTGCCGGAACTGGAACCTCAC CGAAGGAGCAGCTGAACGAGCTAGAGGCCATACGCCGCTTGCTGCTGCGA GTGGAGGCAGTCCACGCGGTCTCTTGGCTGTGGCCTAGCGACATCTCTAC CATTACCCATGCGACCGCAAAAGGCACCGATAGGACAACGGTGACATCGA CAGCTGGAACACCGCCGATGTTGATGATGAGGCGAAGGACTAGAGTGCGC GAGGTTCCTCTGGCAGCGCTGTTGAGGTGGGTAATGAGGTGGGTAATTGT TGTGACGTCGAGAACCGTTTGACCTCTTCATAACCTACTTGAGCTCAAAT TGAAAATTAGCCGAGAAACATTGAAGAATCCCAAACAGAGTCCCACAGCA CCCGTGCACAATGTAATGACAAGTCCAGACAAAAATTCATTCTACGTGTA AGGCGGGCAGGAAGGAAAAATCTACAGACGGAAGTGCACAGTGCCGGCCC GCTCATTAGAAACATATTCGAAACTGGCGTAAGATATTTGAAAATTGAAT CAGCCGGCGGCACCACACCATTTCCTTCCATCGCTATCTGGTAGCTGAGC AAAACAAGACGTTCAATATCGGGAGTATTTCATGCAACGCAACATAAAAC CCGAAGACGGTGCCTTGCACCAACTTCACAGCGTAGTGTTGACCGTCGGG ACTCGGTGGTACCCGTGGGAATGGCATGTGTCCTTTTCTATCCAGAGCTC TCGTTCGACTTGTACCTCCGCTGCAATCGCCGCGGTCGCGTTGGTAGTGC GTACCACTCTGGTTTTTATCATTGTCCTGACTGCTGCTGTAGCCAGTCAT TTTCGCCAGGCTTGTGATGGCGTAAGTCTGCTTAACGAGTCGTCCCATGG AGAGATTGACCGGTCTCCTCGGAAGGGTGACGAGTAGACAAAATAGTGGC GTTTTCTGTTGCGGGGCCACGTGCTCCTTGTGCAGGCTTCTTCGTGAACG GCAATGCTTACCCTGAAGTCCGTTTCGACACATTTACGGACCGTCTATTT GGTTTGGTTGCTCGTCGTCCTTCGGACCCGTGTGCCCGTTTGCAGGTATT CGTCGAAACCTCGACCGGGATGAAAATGAGCCTCTTCCGCCTTCAGCTTT ATCGTCGGACAGAGTGGCGAGATGGGCACTCACGCACCAGCAGCTGGCCG TGCCGGGTCCTGGATTGGAGGAAGTGACTCCTGGCAACCGTTTTTATTTT GATGATGCGATATGTTGTGTTCATGTTCGAATGTGTCAGAAGCTTGCTGC TGCAGTTTATTTTACAATTTGTCGGTAACCTGAAAGTACGCGGATTGTGT TTTTGTGAAGAATGGAGGGTGGCTCAAGCACTGCAGGTCTCCCCGAAAGC TGTAACTGACGTTATGTTTCCATGGGCTGCAGTGACAGTAATGTTGGTTG TTGTTACGTGTGGTACTTTCTGTTGGGGTTGTGGCTTGCAGCGAACATCG TTG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig15160:231..2783+

>mRNA_Ecto-sp13_S_contig15160.3890.1 ID=mRNA_Ecto-sp13_S_contig15160.3890.1|Name=mRNA_Ecto-sp13_S_contig15160.3890.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1323bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15160:231..2783+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCCCGAAGTGCCTCGCATCCAGCAGTGGCCTCGTGGCCCTACGAATCC
TTTGCACCATGCTGCCGATTGTGGTTCTTTCGAGGCTGCAGCGGCCGTCG
TTGCGAGCGGTGCTTTCGACATTGATCAGGGCAATGAGTTCGGCTGGACC
GCTCTCATGATGGCTTCCCGTGGAGGTCACTCCCGGATTGTCAGGATGCT
TCTGATAAAGGGAGCACAGGTTTTGATAGCGAATGATCTGGACACCACTG
CTTTGCACCAGTCCGTTTTGGGAGGACACCTGGCGGTGACCAAGATGCTG
GTGGAAGCCGGTGCACCCCTCGAAGCAGTGACCAAAGAACAACTTTGGAC
GCCGCTTCACATTGCTGCTAGAAACGGGTGCGCGGAGTCCATAACAACAT
TGCTCGATGCCGGTGCGAATCTGAACAGCCGTCAGTCGGATGGAGCAACA
CCGCTGTACACTGCGGCGTTGCAAGGGAACGTGAATGCGTTTAGGTTGCT
ACTTGTCGCGAAGGCAGACCCACTCCTGACCTGCGCACCTGATTCGCCGG
AAGATGTATTCCTCCCTTTGGACGCGGCGGCGGTAAAGGGACACGCGGAA
GTGGTGCATGAGCTGATCCGGCAGGTGGGCATCGATGGATGTGGTGGCTC
AAGCGGCGGGGAACATGCTCTCCAGCAGGCCGCACTTTCCAGGCATTTGG
ATATCATGGCCATTCTAACGAATGCCGGAGTGGTAGACACATCAGGGTTA
GCTCTGCGGATGGCCGCCGGATTTGGAGGCGAGGCCCCTGTGCAATTCCT
GTTGGAGCAGGCAAGGGCGAGGAAAACAATGGATCTACTGGCGTACGTGA
ACGCCCGCGACTGTTGCGGTATGACTCCGTTGCTTTGTGCCGTTCGATCC
CACGGGCCGTGTTCTCCCAGAGTTGTACGGTTGCTTGCCGAAGCCGGAGC
GGACACGACATCCGCTGTTGTTGTCTGCAGCCAACCTGAGGAGGACGGTT
TCAGCATCACACCCCTGGGCTTCACTGTGGGTTTCCTCCGTCATAAGGTT
GCCGGAACTGGAACCTCACCGAAGGAGCAGCTGAACGAGCTAGAGGCCAT
ACGCCGCTTGCTGCTGCGAGTGGAGGCAGTCCACGCGGTCTCTTGGCTGT
GGCCTAGCGACATCTCTACCATTACCCATGCGACCGCAAAAGGCACCGAT
AGGACAACGGTGACATCGACAGCTGGAACACCGCCGATGTTGATGATGAG
GCGAAGGACTAGAGTGCGCGAGGTTCCTCTGGCAGCGCTGTTGAGGTATT
CGTCGAAACCTCGACCGGGATGA
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