mRNA_Ecto-sp13_S_contig15160.3890.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig15160.3890.1 vs. uniprot
Match: A0A6H5KQV0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQV0_9PHAE) HSP 1 Score: 486 bits (1250), Expect = 8.050e-165 Identity = 299/437 (68.42%), Postives = 340/437 (77.80%), Query Frame = 2
Query: 32 MPEVPRIQQWPRGPTNPLHHAADCGSFEAAAAVVASGAFDIDQGNEFGWTALMMASRGGHSRIVRMLLIKGAQVLIANDLDTXXXXXXXXXXXXXXXXXXXXAGAPLEAVTKEQLWTPLHIAARNGCAESITTLLDAGANLNSRQSDGATPLYTAALQGNVNAFRLLLVAKADPLLTCAPDSPEDVFLPLDAAAVKGHAEVVHELIRQVGIDGCGGSSGGEHALQQAALSRHLDIMAILTNAGVVDTSGLALRMAAGFGGEAPVQFLLEQARARKTMDLLAYVNARDCCGMTPLLCAVRSHGPCSPRVVRLLAEAGADTTSAVVVCSQPEEDGFSITPLGFTVGFLRHKVAGTGTSPKEQLNELEAIRRLLLRVEAVHAVSWLWPSDISTITHATAKGTDRTTVTSTAGTP-PMLMMRRRTRVREVPLAALLRYSSK 1339
M VP QQWP GP+NPL AADCGSF+ AA ++ASGAFDIDQGNE GWT LMMASRGG+ RIVRMLL KGAQV + + XXXXXXXXXXXXXXXXXXXX A L+A TK+ TPL AA GCA S+T LL AG+N+N+R+SDGATPLYTAA GNV A LLL+AKADPLLTCA DS ++ FLPLD AA GH EVV+ELIRQVGIDGCGGSSGGE+AL+QAAL LDIMAILT+AGVVDT GLAL +AAG+GGEAP++FLLEQAR RK+ D AY+N + G+T LL ++ C PRVV+LL EAGADTTS V++C+QP ED F ITPLG T+ L + A T E+ N+LE IRRLLLR EAVHAVSWLWPSD TITHATAKGT RTT TSTA TP MLM+ RRTR R+ LAALLRYSSK
Sbjct: 1 MRGVPLPQQWPHGPSNPLQAAADCGSFKTAANLLASGAFDIDQGNEVGWTPLMMASRGGYPRIVRMLLNKGAQVWVTDXXXXXXXXXXXXXXXXXXXXXXXXXXALLDAATKQNHCTPLDCAAETGCAASVTALLKAGSNINTRRSDGATPLYTAAWNGNVVAVWLLLLAKADPLLTCASDSGKERFLPLDVAAQNGHREVVNELIRQVGIDGCGGSSGGENALRQAALFSRLDIMAILTDAGVVDT-GLALVVAAGYGGEAPLKFLLEQARGRKSTDRAAYMNTLNGVGLTSLLDGIQR---CRPRVVQLLVEAGADTTSPVLICNQPGEDDFHITPLGLTMCLLGGRSAKPLTM--EEQNKLEVIRRLLLREEAVHAVSWLWPSDTPTITHATAKGTGRTTATSTAATPFIMLMIGRRTRGRKGLLAALLRYSSK 431
BLAST of mRNA_Ecto-sp13_S_contig15160.3890.1 vs. uniprot
Match: A0A6H5KJA9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJA9_9PHAE) HSP 1 Score: 477 bits (1228), Expect = 9.490e-162 Identity = 297/439 (67.65%), Postives = 332/439 (75.63%), Query Frame = 2
Query: 32 MPEVPRIQQWPRGPTNPLHHAADCGSFEAAAAVVASGAFDIDQGNEFGWTALMMASRGGHSRIVRMLLIKGAQVLIANDLDTXXXXXXXXXXXXXXXXXXXXAGAPLEAVTKEQLWTPLHIAARNGCAESITTLLDAGANLNSRQSDGATPLYTAALQGNVNAFRLLLVAKADPLLTCAPDSPEDVFLPLDAAAVKGHAEVVHELIRQVGIDGCGGSSGGEHALQQAALSRHLDIMAILTNAGVVDTSGLALRMAAGFGGEAPVQFLLEQARARKTMDLLAYVNARDCCGMTPLLCAVRSHGPCSPRVVRLLAEAGADTTSAVVVCSQPEEDGFSITPLGFTVGFLRHKV--AGTGTSPKEQLNELEAIRRLLLRVEAVHAVSWLWPSDISTITHATAKGTDRTTVTSTAGTPPMLMMRRRTRVREVPLAALLRYSSKP 1342
MP VPR QQ PRGP+N LH AA+CGSFEA A V+ASGAFDIDQGNE+GWTALM+ASRGG++RIV M+L KGAQV I XXXXXXXXXXXXXXXXXXXX P+EA T + L NLNSR+SDGATPLYTAA +GNV+A RLLL+AKADPLLT PD FLPLDAAA GH EVV+ELIRQVGIDGCGGSSGG ALQQAA ++L+IM ILTNAGVVDT GLAL +AAG+GGE P++FLLEQARARKTMD AYVN RD G+TPLL ++ + PRVVRLL EAGADTTS V V +Q D SITPLG T+ +R KV G G + EQL++LEAIRRLLLRVEAVHAVSWLWPSDISTIT A A+GTDRTT STA T PML+ RRR R R+VPLAALLRYSSKP
Sbjct: 1 MPRVPRPQQRPRGPSNRLHAAAECGSFEATATVLASGAFDIDQGNEYGWTALMLASRGGYARIVGMILNKGAQVSITXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVEATTTQHLCXXXXXXXXXXXXXXXXXXXXXXXNLNSRRSDGATPLYTAAWKGNVDAARLLLLAKADPLLTTVPDPSGRTFLPLDAAAENGHPEVVNELIRQVGIDGCGGSSGGVRALQQAAQFKNLNIMVILTNAGVVDT-GLALVVAAGYGGETPLKFLLEQARARKTMDEAAYVNTRDRGGVTPLLWGIQHY---RPRVVRLLVEAGADTTSPVAVRNQLGGDDVSITPLGLTMNPVRDKVKVVGRGPASPEQLHKLEAIRRLLLRVEAVHAVSWLWPSDISTITRAAARGTDRTTAISTAVTLPMLVTRRRARGRKVPLAALLRYSSKP 435
BLAST of mRNA_Ecto-sp13_S_contig15160.3890.1 vs. uniprot
Match: D7FXY7_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXY7_ECTSI) HSP 1 Score: 325 bits (832), Expect = 1.310e-103 Identity = 199/337 (59.05%), Postives = 232/337 (68.84%), Query Frame = 2
Query: 338 AGAPLEAVTKEQLWTPLHIAARNGCAESITTLLDAGANLNSRQSDGATPLYTAALQGNVNAFRLLLVAKADPLLTCAPDSPEDVFLPLDAAAVKGHAEVVHELIRQVGIDGCGGSSGGEHALQQAALSRHLDIMAILTNAGVVDTSGLALRMAAGFGGEAPVQFLLEQARARKTMDLLAYVNARDCCGMTPLLCAVRSHGPCSPRVVRLLAEAGADTTSAVVVCSQPEEDGFSITPLGFTVGFLRHKVAGTGTSPKEQLNELEAIRRLLLRVEAVHAVSWLWPSDISTITHATAKGTDRTTVTSTAGTPPMLMMRRRTRV--REVPLAALLRYSSKP 1342
AGAPLE TK+QL TPL IAA NGCA S+TTLL+AGANLNSR+ DGATPL+ AA +GNV+A RLLL+AK DPLLT + E LPLD AA GH EVV+ELIRQVGI GCGGSSGG ALQQAA ++HLD++ +LTNAGVVDT GLA G P++ + + + C + C H C PRVVRLL EAGADTTS V + P D +ITP+G T+ L H + GT +EQLN LEAI RLLLRVEA+HAVSWLW SDI T++TA+GTDRTT STAGTP +L MR+R R REVPLAALLRYSSKP
Sbjct: 5 AGAPLEVATKQQLCTPLQIAAVNGCAASMTTLLEAGANLNSRRFDGATPLFLAAWEGNVDAVRLLLLAKVDPLLTPHLGTSERASLPLDVAAGLGHLEVVNELIRQVGIGGCGGSSGGVRALQQAARNKHLDMLTVLTNAGVVDT-GLARGRRIWRRG--PLEVSVGAGKGEENHGWTCVCEHPQRCRFDAIACW---HQRCRPRVVRLLVEAGADTTSTVPIDGLPGTD--NITPMGLTM-LLLHDL-GTEPLTEEQLNALEAIHRLLLRVEALHAVSWLWSSDICNCTYSTAQGTDRTTSKSTAGTPLVLTMRQRARSKEREVPLAALLRYSSKP 331
BLAST of mRNA_Ecto-sp13_S_contig15160.3890.1 vs. uniprot
Match: D7FT11_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT11_ECTSI) HSP 1 Score: 259 bits (662), Expect = 7.670e-76 Identity = 188/431 (43.62%), Postives = 233/431 (54.06%), Query Frame = 2
Query: 77 NPLHHAADCGSFEAAAAVVASGAFDIDQGNEFGWTALMMASRGGHSRIVRMLLIKGAQVLIANDLD-TXXXXXXXXXXXXXXXXXXXXAGAPLEAVTKEQLWTPLHIAARNGCAESITTLLDAGANLNSRQSDGATPLYTAALQGNVNAFRLLLVAKADPLLTCAPDSPEDVFLPLDAAAVKGHAEVVHELIRQVGIDGCGGSSGGEHALQQAALSRHLDIMAILTNAGVVDTSGLALRMAAGFGGEAPVQFLLEQARARKTMDLL-AYVNARDCCGMTPLLCAVRSHGPCSPRVVRLLAEAGADTTSAVVVCSQPEEDGFSITPLGFTVGFLRHKVAGTGT-SPKEQLNELEAIRRLLLRVEAVHAVSWLWPSDISTITHATAKGTDRTTVTSTAGTPPM----LMM---RRRTRVREVPLAALLRYSSK 1339
N LH A GS E AV+A G +IDQ N +G T LMMA GHSRI +ML+ KGA V IA+ T AGA L+A+ + PLH A + N + + DG+T L+ AA +G V R LL A+PLL +PLD AA GH +VV ELI+++GI+GC +S G HAL AA ++HLDIMAILT AGVVDT G AL +AAG G EA V+FLL + AY+NARD G TPL+ + +PR+VR+L +AGADTTS V V + F+ TPL FT LR K+ G + KE L LEAI RLLLRV+AVHAVSWLWPS I AT T PP+ LM+ +RRT+ R +A LLRYS K
Sbjct: 107 NQLHRAVLVGSAELTQAVLAGGTVEIDQRNSYGATPLMMAVHNGHSRIAKMLIKKGANVSIADKRGFTALHFCCAREEDDAIVKLLAKAGADLDAIIPGEGSAPLHRATHHEXXXXXXXXXXXXXNPDCQLPDGSTALHIAAEEGQVAVMRELLRGNANPLLIQTSPPGNTTTVPLDLAAKHGHTDVVRELIQELGIEGCDATSAGAHALAFAASNQHLDIMAILTEAGVVDT-GKALYLAAGMGHEASVKFLLRHRHKEGGCGVEGAYLNARDVNGYTPLVVCTQGCFSQAPRIVRMLVDAGADTTSPVQVMNLKGGVVFNDTPLAFTKLRLRKKIVADGKPATKEHLQRLEAICRLLLRVDAVHAVSWLWPSGAPFIGRAT----------ETDPEPPLPALKLMLPILKRRTKRRCGLVATLLRYSVK 526
BLAST of mRNA_Ecto-sp13_S_contig15160.3890.1 vs. uniprot
Match: D7FSU4_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSU4_ECTSI) HSP 1 Score: 248 bits (632), Expect = 2.760e-74 Identity = 187/436 (42.89%), Postives = 210/436 (48.17%), Query Frame = 2
Query: 32 MPEVPRIQQWPRGPTNPLHHAADCGSFEAAAAVVASGAFDIDQG-NEFGWTALMMASRGGHSRIVRMLLIKGAQVLIANDLDTXXXXXXXXXXXXXXXXXXXXAGAPLEAVTKEQLWTPLHIAARNGCAESITTLLDAGANLNSRQSDGATPLYTAALQGNVNAFRLLLVAKADPLLTCAPDSPEDVFLPLDAAAVKGHAEVVHELIRQVGIDGCGGSSGGEHALQQAALSRHLDIMAILTNAGVVDTSGLALRMAAGFGGEAPVQFLLEQARARKTMDLLAYVNARDCCGMTPLLCAVRSHGPCSPRVVRLLAEAGADTTSAVVVCSQPEEDGFSITPLGFTVGFLRHKVAGTGTSP--KEQLNELEAIRRLLLRVEAVHAVSWLWPSDISTITHATAKGTDRTTVTSTAGTPPMLMMRRRTRVREVPLAALLRY 1330
MP+VP+ QQWPRGP N LH AAD G FE AAA++AS AFDID G +E GWTALM+AS G+S IVRMLL KGAQV IA+ AGAPLE TK+ L TPLH+AA NGC ESITT L+A D P PLD AA GHAEVV ELIRQ H C PRV +LL EAGADTTSAV V +D S+TPLG T+ L G T P +EQL +L+AIRRLLLRVEAVHAVSWLW +DISTITH+TA GTDRT TST GTP MLMMRRRT+ REVPL+ALLR+
Sbjct: 1 MPQVPQPQQWPRGPKNSLHEAADYGFFETAAALLASDAFDIDLGEDEGGWTALMIASHRGYSLIVRMLLSKGAQVSIADVHGDSGLHLSVLAGHMAVTKTLVEAGAPLEVATKQLLCTPLHLAADNGCIESITTSLEA-------------------------------------------DVP-----PLDMAAQNGHAEVVQELIRQ--------------------------------------------------------------------------------------------H--CRPRVGQLLVEAGADTTSAVPVSKHFGKD--SVTPLGLTMRLLD----GRSTYPLTEEQLKKLKAIRRLLLRVEAVHAVSWLWSTDISTITHSTAHGTDRTIATSTTGTPLMLMMRRRTKRREVPLSALLRW 288
BLAST of mRNA_Ecto-sp13_S_contig15160.3890.1 vs. uniprot
Match: A0A6H5JMS6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMS6_9PHAE) HSP 1 Score: 245 bits (626), Expect = 2.070e-73 Identity = 174/334 (52.10%), Postives = 203/334 (60.78%), Query Frame = 2
Query: 338 AGAPLEAVTKEQLWTPLHIAARNGCAESITTLLDAGANLNSRQSDGATPLYTAALQGNVNAFRLLLVAKADPLLTCAPDSPEDVFLPLDAAAVKGHAEVVHELIRQVGIDGCGGSSGGEHALQQAALSRHLDIMAILTNAGVVDTSGLALRMAAGFGGEAPVQFLLEQARARKTMDLLAYVNARDCCGMTPLLCAVRSHGPCSPRVVRLLAEAGADTTSAVVVCSQPEEDGFSITPLGFTVGFLRHKVAGTGTSPKEQLNELEAIRRLLLRVEAVHAVSWLWPSDISTITHATAKGTDRTTVTSTAGTPPMLMMRRRTRVR---EVPLAALLRY 1330
AGAPLE TK+QL TPLH+AA NGCA S T+L AGAN NSR+ DGA+ + +G R + + LP D A GH EVV+ELIRQVGI GCGGSSGG ALQQAA ++ LD++ +LT+AGVVDT GLALR AA FGG AP++FLLEQARARKTM A A + CG C + PR T V S P +G T+ LR GT +EQLN LEAIRRLLLRVEAVHAVSWLW SDIST T++TA+GT RTT ST GTP +L MR+R R R EV LAALLR+
Sbjct: 5 AGAPLEVATKQQLCTPLHVAAVNGCAASTRTMLKAGANPNSRRFDGASRYFWRRGKG-----RWMRTS-----------------LPFDVAVDLGHLEVVNELIRQVGIGGCGGSSGGVRALQQAARNKPLDMLTVLTSAGVVDT-GLALR-AAAFGGVAPLKFLLEQARARKTMGGPADA-APELCG-----CLSKPERTRHPRFQ--------STAYLVRTTSHP--------CMGLTMLLLRD--LGTEPLTEEQLNALEAIRRLLLRVEAVHAVSWLWSSDISTFTYSTAQGTGRTTSKSTPGTPLVLTMRQRARSRRELEVLLAALLRW 290
BLAST of mRNA_Ecto-sp13_S_contig15160.3890.1 vs. uniprot
Match: D7G1I8_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1I8_ECTSI) HSP 1 Score: 234 bits (597), Expect = 7.650e-68 Identity = 194/434 (44.70%), Postives = 244/434 (56.22%), Query Frame = 2
Query: 41 VPRIQQWPRGPTNPLHHAADCGSFEAAAAVVASGAFDIDQGNEFGWTALMMASRGGHSRIVRMLLIKGAQVLIANDLDTXXXXXXXXXXXXXXXXXXXXAGAPLEAVTKEQLWTPLHIAARNGCAESITTLLDAGANLNSRQSDGATPLYTAALQGNVNAFRLLLVAKADPLLTCAPDSPEDVFLPLDAAAVKGHAEVVHELIRQVGIDGCGGSSGGEHALQQAALSRHLDIMAILTNAGVVDTSGLALRMAAGFGGEAPVQFLLEQARARKTMDLLAYVN-ARDCCGMTPLLCAVRSHGPCSPRVVRLLAEAGADTTSAVVVCSQPEEDGFSITPLGFTVGFLRHKVAGTGTSPKEQLNELEAIRRLLLRVEAVHAVSWLWPSDISTITHATAKGTDRTTVTSTAGTPPMLMMRRRTRVREVPLAALLRYSSK 1339
+P ++WPRGP N LH AAD GS + AA+++SG +I+QG+ GWT LM+AS+ G++RIVR+L+ +GA VLI DL XXXXXXXXXXXXXXXXX AGA LEA T PLH+AA G NLNSR+ D AT AKADPLL S D F+PLDAAA KG + VV E + Q+GIDGCGG S G HAL AA + +D MA+L NAGVVDT G+AL A E ++FLL Q + + AYV+ ARD G TPLLC++ E++G LG ++V G + +EQ ++L A+ RLLLRVEAVHA SWLW SD I H TA+ T RT VT + + ++ TR R L+A+LRYSSK
Sbjct: 3 MPAQEKWPRGPKNELHFAADTGSTQRTAAILSSGLININQGDPDGWTPLMVASQRGYTRIVRILVKEGANVLIVADLGFTAXXXXXXXXXXXXXXXXXNAGADLEAATSTNGSRPLHLAADKGHXXXXXXXXXXXXNLNSRRFDRATXXXXXXXXXXXXXXXXXXXAKADPLLIRLNVS-RDRFVPLDAAAGKGRSLVVREFLDQLGIDGCGGPSRGAHALYHAAKEQFVDTMAVLANAGVVDT-GIALIGAIKENREGSIKFLLRQQQLQGN-PTGAYVDEARDPFGRTPLLCSI-------------------------------EDEGLVDHYLG------ENRVIGRDIT-EEQAHKLNAVHRLLLRVEAVHAASWLWVSDAPDIAH-TAEVTKRTKVTPSPRSRMFPVLGLSTR-RNALLSAVLRYSSK 393
BLAST of mRNA_Ecto-sp13_S_contig15160.3890.1 vs. uniprot
Match: A0A6H5JL33_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL33_9PHAE) HSP 1 Score: 198 bits (504), Expect = 4.640e-54 Identity = 148/375 (39.47%), Postives = 193/375 (51.47%), Query Frame = 2
Query: 53 QQWPRGPTNPLHHAADCGSFEAAAAVVAS-GAFDIDQGNEFGWTALMMASRGGHSRIVRMLLIKGAQVLIANDLDTXXXXXXXXXXXXXXXXXXXXAGAPLEAVTKEQLWTPLHIAARNGCAESITTLLDAGANLNSRQSDGATPLYTAALQGNVNAFRLLLVAKADPLLTCAPDSPEDVFLPLDAAAVKGHAEVVHELIRQVGIDGCGGSSGGEHALQQAALSRHLDIMAILTNAGVVDTSGLALRMAAGFGGEAPVQFLLEQARARKTM-DLLAYVN-ARDCCGMTPLLCAV---RSHGPCSPRVVRLLAEAGADTTSAVVVCSQPEEDGFSITPLGFTVGFLRHKVAGTGTSPKEQLNELEAIRRLLLRVEA 1159
Q WPRGP N LH AA+ GS E A++AS + ID G E+GWT LM+A+ G SR+VR+LL KGA V + + XXXX +AA GC E AKA+PLLT P F+PLD AA G EVV ELI+QV I GCGG+SGG +AL+ AALS+++D+M++L +AGV+DT G AL AAG EA V+ LL+Q +L YVN D G TPLLC++ + CSPRVVRLL +AGADT SAV + + G S+TP+ F L + G T+ ++ +++L AI RL +VEA
Sbjct: 9 QPWPRGPQNDLHRAANDGSVERVVALLASRSSIAIDAGAEYGWTPLMLAAWRGSSRVVRILLNKGANVSVVAEDGHTALHFSTQDGGHPVVTXXXXXXXXXXXXXXXXXXXXXXLAANAGCWEVAQVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAKANPLLT-KPTPSGVTFVPLDTAAEYGQTEVVRELIKQVSIKGCGGASGGVYALRLAALSQNVDVMSVLADAGVMDT-GEALITAAGRNDEAGVKLLLQQRHGTSAGGELYMYVNDTHDLVGRTPLLCSIDGGMAGFRCSPRVVRLLVDAGADTVSAVPLKGTAGQIGRSVTPIDFATCSLHENMDGGKTAMEKHVHKLRAIHRLFSQVEA 381
BLAST of mRNA_Ecto-sp13_S_contig15160.3890.1 vs. uniprot
Match: D7FVK3_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVK3_ECTSI) HSP 1 Score: 194 bits (493), Expect = 3.350e-52 Identity = 170/440 (38.64%), Postives = 210/440 (47.73%), Query Frame = 2
Query: 44 PRIQQWPRGPTNPLHHAADCGSFEAAAAVVASGAFDIDQGNEFGWTALMMASRGGHSRIVRMLLIKGAQVLIANDLDTXXXXXXXXXXXXXXXXXXXXAGAPLEAVTKEQLWTPLHIAARNGCAESITTLLDAGANLNSRQSDGATPLYTAALQGNVNAFRLLLVAKADPLLTCAPDSPEDVFLPLDAAAVKGHAEVVHELIRQVGIDGCGGSSGGEHALQQAALSRHLDIMAILTNAGVVDTSGLALRMAAGFGGEAPVQFLLEQARARKTMDLLAYVNA-RDCCGMTPLLCA--VRSHGPCSPRVVRLLAEAGADTTSAVVVCSQPEEDGFSITPLGFTVGFLRHKVAGTGTSPKEQLNELEAIRRLLLRVEAVHAVSWLWPSDISTITHATAKGTDRTTVTSTAGTPPML-----MMRRRTRVREVPLAALLRYSSK 1339
P +QQ PR N LH AA GS AA++++G+ DID G+ G T LM A H +V +LL KGA V ND + XXXXXX AKA+PLLT + + LPLD AA G VV EL+++ GI GCGG +GG ALQ AA+ H+D+M LT AGVVDT G+AL A FG V+FLL+Q + + AYV+ RD CG TPL+C V + CSP+VVRLL +AGADTTS V QP TPL LR K+A P E L LE IRRLLLRVEAVHA SWLW + + + A GT T S++ T P L ++RRR R R A+L RY+ K
Sbjct: 5 PLLQQSPRVVINKLHEAARDGSTWLTAAILSTGSIDIDGGDSSGGTPLMHAICNDHPSVVSILLSKGASVSAIND-EGNTALHLSAFAGYVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAKANPLLTRVNLAWQ--HLPLDTAAQNGRLGVVLELLQRFGIRGCGGGTGGVTALQLAAMKPHMDVMLALTTAGVVDT-GIALVKATSFGHMDVVKFLLQQQNGTPS-EKSAYVSRPRDPCGRTPLICNIDVGLNQSCSPKVVRLLVDAGADTTSIVRFTIQPGTLPVVCTPLSLATEALRIKIAYRKAIPDELLRRLELIRRLLLRVEAVHATSWLWQNGVPRV-GLPAGGTAATETESSSTTAPQLRTVLPILRRRARGRGFVSASLCRYAVK 438
BLAST of mRNA_Ecto-sp13_S_contig15160.3890.1 vs. uniprot
Match: D7G1H7_ECTSI (EsV-1-199 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1H7_ECTSI) HSP 1 Score: 189 bits (480), Expect = 2.070e-50 Identity = 186/442 (42.08%), Postives = 227/442 (51.36%), Query Frame = 2
Query: 41 VPRIQQWPRGPTNPLHHAADCGSFEAAAAVVAS-GAFDIDQGNEFGWTALMMASRGGHSRIVRMLLIKGAQVLIANDLDTXXXXXXXXXXXXXXXXXXXXAGAPLEAVTKEQLWTPLHIAARNGCAESITTLLDAGANLNSRQSDGATPLYTAALQGNVNAFRLLLVAKADPLLTCAPDSPEDVFLPLDAAAVKGHAEVVHELIRQVGIDGCGGSSGGEHALQQAALSRHLDIMAILTNAGVVDTSGLALRMAAGFGGEAPVQFLLEQARARKTMDLLAYVNA-RDCCGMTPLLCAVRSHGP--CSPRVVRLLAEAGADTTSAVVVCS-QPEEDGFSITPLGFTVGFLRHKVAGTGTSPKEQLNELEAIRRLLLRVEAVHAVSWLWPSDISTITHATAKGTDRTTVTSTAGTPPML----MMRRRTRVREVPLAALLRYSSK 1339
+PR QQ RGP N LH AA GS E A+++S GA DID GN TALM+A+ G++ +V LL KGA V XXXXXXXXXXXXXXXXXXXX +LL AKA+PLL C+ ++PL+ AA+ G+ +V E+IRQVGI GCGG SGG AL+QAA HL+ MA+L +AG V +G AL +AA G V+FLL + +A D AYVN RD G TP++CAV CSP++VRLL +AGA+TT AV V P + S TPL FT LR + KEQL L+ R LL R EAVHAVSWLW S A A G +T STA P+ M+RR+ R V L L RYS K
Sbjct: 1 MPRPQQVTRGPMNALHKAAWDGSVEMTGAILSSRGAPDIDLGNPSAATALMIATVKGYAGVVNALLSKGANVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-XXXXXXXXXXXXXXXXXXXXXXVLLRAKANPLL-CSHTPMGVSYVPLEMAALHGNPDVAREMIRQVGIRGCGGPSGGVEALRQAADEEHLEFMAVLLDAGGVVDTGPALILAAENGRAVAVKFLLRRRQA----DADAYVNGTRDPYGRTPVMCAVDVGAGRLCSPKIVRLLVDAGANTTRAVGVTRITPRWEKTSETPLAFTTRLLREGRVDGEAATKEQLQRLKDTRCLLSRAEAVHAVSWLWASG-EPPRIAQAAGDTKTETASTAVATPLRAMSPMLRRKPGTRGVLLKTLFRYSRK 435 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15160.3890.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig15160.3890.1 >prot_Ecto-sp13_S_contig15160.3890.1 ID=prot_Ecto-sp13_S_contig15160.3890.1|Name=mRNA_Ecto-sp13_S_contig15160.3890.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=441bp MPEVPRIQQWPRGPTNPLHHAADCGSFEAAAAVVASGAFDIDQGNEFGWTback to top mRNA from alignment at Ecto-sp13_S_contig15160:231..2783+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig15160.3890.1 ID=mRNA_Ecto-sp13_S_contig15160.3890.1|Name=mRNA_Ecto-sp13_S_contig15160.3890.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2553bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15160:231..2783+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig15160:231..2783+ >mRNA_Ecto-sp13_S_contig15160.3890.1 ID=mRNA_Ecto-sp13_S_contig15160.3890.1|Name=mRNA_Ecto-sp13_S_contig15160.3890.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1323bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15160:231..2783+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |