prot_Ecto-sp13_S_contig1516.3888.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1516.3888.1
Unique Nameprot_Ecto-sp13_S_contig1516.3888.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length341
Homology
BLAST of mRNA_Ecto-sp13_S_contig1516.3888.1 vs. uniprot
Match: D7FIL6_ECTSI (Raptor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIL6_ECTSI)

HSP 1 Score: 512 bits (1319), Expect = 1.450e-172
Identity = 307/343 (89.50%), Postives = 311/343 (90.67%), Query Frame = 0
Query:    1 MWLCLCLAKLCWQYTDAQDACVRLDIQGSLFTCLERKNGGPGQRQGAPMMGVGGQASAGPGSNDGGGGQRGGMDVWPSLVPDCSPGAAVAGTSEMRRLDELDIALRLAKHSGDASPLLRREVVLALGVLVLNPAHFPFFVTVAQELAINRAAXXXXXXXXXXXXXXXXXXXXXXXXX--SESSCPAECGDRNVSPPPQSGSRGSTVAGGGGLMGRLSTSPPLRSSRWVLPSPRLSSSVNSCSGVALGGIGSHGGAWRGADANCGDAGGSGTTDWSTQXXXXXXXQWPARAGDANSVARGLVPGKIGWRGGSVGCADREQQQATPNLGEGVLQSVGAEAAQHYA 341
            MWLCLCLAKLCWQYTDAQDACVRLDIQGSLF CLERK+GGPGQRQGAPMMGVGGQASAGPGS DGGGGQRGGMD WPSLVPDCSPGAAVAGTSE RRLDELDIALRLAKHSGDASPLLRREVVLALG+LVLNPAHFPFFVTVAQELAINRAAXXXXXXXXXXXXXXXXXXXXXXXXX  S+SSC AECG+ NVSP  QSGSRGS VAGGGGL GRLSTSPPLRSSRWVLPSPRLSSSVNS SGVALGGIGSHGG WRG DANC DAG          XXXXXXXQW ARA D NSVARGLVPGKIGW GGSV CADREQQQATPNL EGVLQSVGAEAAQHYA
Sbjct:  585 MWLCLCLAKLCWQYTDAQDACVRLDIQGSLFACLERKDGGPGQRQGAPMMGVGGQASAGPGSTDGGGGQRGGMDAWPSLVPDCSPGAAVAGTSETRRLDELDIALRLAKHSGDASPLLRREVVLALGLLVLNPAHFPFFVTVAQELAINRAAXXXXXXXXXXXXXXXXXXXXXXXXXXXSQSSCRAECGESNVSPQRQSGSRGSAVAGGGGLAGRLSTSPPLRSSRWVLPSPRLSSSVNSSSGVALGGIGSHGGGWRGGDANCSDAGXX--XXXXXXXXXXXXXQWRARAEDVNSVARGLVPGKIGWGGGSVVCADREQQQATPNLNEGVLQSVGAEAAQHYA 925          
BLAST of mRNA_Ecto-sp13_S_contig1516.3888.1 vs. uniprot
Match: A0A6H5KBF0_9PHAE (Raptor_N domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBF0_9PHAE)

HSP 1 Score: 448 bits (1153), Expect = 2.080e-140
Identity = 302/485 (62.27%), Postives = 309/485 (63.71%), Query Frame = 0
Query:    1 MWLCLCLAKLCWQYTDAQDACVRLDIQGSLFTCLERK-----------------------------------------------------------------------------------------------------------------------------------------NGGPGQRQGAPMMGVGGQASAGPGSNDGGGGQRGGMDVWPSLVPDCSPGAAVAGTSEMRRLDELDIALRLAKHSGDASPLLRREVVLALGVLVLNPAHFPFFVTVAQELAINRAAXXXXXXXXXXXXXXXXXXXXXXXXXSESSCPAECGDRNVSPPPQSGSRGSTVAGGGGLMGRLSTSPPLRSSRWVLPSPRLSSSVNSCSGVALGGIGSHGGAWRGADANCGDAGGSGTTDWSTQXXXXXXX-------QWPARAGDANSVARGLVPGKIGWRGGSVGCADREQQQATPNLGEGVLQSVGAEAAQHYA 341
            MWLCLCLAKLCWQYTDAQDACVRLDIQGSLF CLERK                                                                                                                                         +GGPGQRQGA MMGVGGQASAGPGS +GGGG +GGMD WPSLVPDCSPGAAVAGTSE RRLDELDIALRLAKHSGDASPLLRREVVLALGVLVLNPAHFPFFVTVAQELAINRAAXXXXXXXXXXXXXXXXXXXXXXXXXS+SSC AECGD NVSP  QS +RGS VAGGGGL G LS SP LRSSRWV PSPRLSSSVN+ +G ALGGIGSHGG WRGADANCGDAGGSGTTD STQ   XXXX       QW  RA DANSVARGLVPGKIGW G SVGCADREQQQAT NL EGVLQSVGAEAA HYA
Sbjct:  882 MWLCLCLAKLCWQYTDAQDACVRLDIQGSLFACLERKVETVEVRCAAVYALGSLYSREIIAHPEAGAATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGGVREGGPFQPAAPPPGQQQQQARIGAVLPPGLGRVAQGGGVGTPMFXXXXXXXXXXIVGRQDGGPGQRQGAQMMGVGGQASAGPGSTNGGGGHKGGMDAWPSLVPDCSPGAAVAGTSETRRLDELDIALRLAKHSGDASPLLRREVVLALGVLVLNPAHFPFFVTVAQELAINRAAXXXXXXXXXXXXXXXXXXXXXXXXXSQSSCRAECGDSNVSPQRQSWNRGSAVAGGGGLAGHLSKSPALRSSRWVPPSPRLSSSVNNSNGFALGGIGSHGGGWRGADANCGDAGGSGTTDGSTQHQHXXXXXXXXXXXQWRGRAEDANSVARGLVPGKIGW-GESVGCADREQQQATLNLSEGVLQSVGAEAAHHYA 1365          
BLAST of mRNA_Ecto-sp13_S_contig1516.3888.1 vs. uniprot
Match: A0A836CAT4_9STRA (Raptor_N domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAT4_9STRA)

HSP 1 Score: 68.2 bits (165), Expect = 9.000e-9
Identity = 54/157 (34.39%), Postives = 70/157 (44.59%), Query Frame = 0
Query:    2 WLCLCLAKLCWQYTDAQDACVRLDIQGSLFTCLERKNGGPGQRQGAPMMGVG----GQASAGPGSNDGGGGQRGGMDVWPSLVPDCS-----PGAAVA--------------GTSEMRRLDELDIALRLAKHSGDASPLLRREVVLALGVLVLNPAH 135
            WLCLCLAKLCW   +A+ A +R   Q S   CL   +G P  R  A          G+A A                  PS  P+ +     PGA +               G    RR  +L +A+ LA+  GD SPL+RRE VLAL ++ +NPAH
Sbjct:  658 WLCLCLAKLCWGLPEARAAVLRDGAQRSALACLA--DGTPEVRCAAAYAAAALLSCGEARA------------------PSWAPEGAAASPPPGAGLMRPDFGRLPQQVEGRGAEAARRQADLAMAVLLAERCGDGSPLVRREAVLALAIMAVNPAH 794          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1516.3888.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FIL6_ECTSI1.450e-17289.50Raptor n=1 Tax=Ectocarpus siliculosus TaxID=2880 R... [more]
A0A6H5KBF0_9PHAE2.080e-14062.27Raptor_N domain-containing protein n=1 Tax=Ectocar... [more]
A0A836CAT4_9STRA9.000e-934.39Raptor_N domain-containing protein n=1 Tax=Tribone... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..12
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 18..341
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 13..17
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..17
score: 0.771

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1516contigEcto-sp13_S_contig1516:2006..4345 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1516.3888.1mRNA_Ecto-sp13_S_contig1516.3888.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1516 2006..5196 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1516.3888.1 ID=prot_Ecto-sp13_S_contig1516.3888.1|Name=mRNA_Ecto-sp13_S_contig1516.3888.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=341bp
MWLCLCLAKLCWQYTDAQDACVRLDIQGSLFTCLERKNGGPGQRQGAPMM
GVGGQASAGPGSNDGGGGQRGGMDVWPSLVPDCSPGAAVAGTSEMRRLDE
LDIALRLAKHSGDASPLLRREVVLALGVLVLNPAHFPFFVTVAQELAINR
AAAAAAAARKEAARWKSGKGAASNGGGSESSCPAECGDRNVSPPPQSGSR
GSTVAGGGGLMGRLSTSPPLRSSRWVLPSPRLSSSVNSCSGVALGGIGSH
GGAWRGADANCGDAGGSGTTDWSTQQQQQQQQQWPARAGDANSVARGLVP
GKIGWRGGSVGCADREQQQATPNLGEGVLQSVGAEAAQHYA
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