mRNA_Ecto-sp13_S_contig1516.3888.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig1516.3888.1
Unique NamemRNA_Ecto-sp13_S_contig1516.3888.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig1516.3888.1 vs. uniprot
Match: D7FIL6_ECTSI (Raptor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIL6_ECTSI)

HSP 1 Score: 676 bits (1743), Expect = 6.700e-235
Identity = 389/435 (89.43%), Postives = 393/435 (90.34%), Query Frame = 1 
Query:    1 VELVKHRAYVNFIKHLRWEDMPAQQRVFAAFVLACIMDGYRPGQEACLQHLLHNICWTLLNTDTDSDTEVLRRPHR*GQRSSDPSLRDPSVRMWLCLCLAKLCWQYTDAQDACVRLDIQGSLFTCLERKNGGPGQRQGAPMMGVGGQASAGPGSNDGGGGQRGGMDVWPSLVPDCSPGAAVAGTSEMRRLDELDIALRLAKHSGDASPLLRREVVLALGVLVLNPAHFPFFVTVAQELAINRAAXXXXXXXXXXXXXXXXXXXXXXXXX--SESSCPAECGDRNVSPPPQSGSRGSTVAGGGGLMGRLSTSPPLRSSRWVLPSPRLSSSVNSCSGVALGGIGSHGGAWRGADANCGDAGGSGTTDWSTQXXXXXXXQWPARAGDANSVARGLVPGKIGWRGGSVGCADREQQQATPNLGEGVLQSVGAEAAQHYA 1299
            VELVKHRAYVNFIKHLRWEDMPAQQRVFAAFVLACIMDGYR GQEACLQHLLHNICWTLLNTDTDSDTEVL         SSDPSLRDPSVRMWLCLCLAKLCWQYTDAQDACVRLDIQGSLF CLERK+GGPGQRQGAPMMGVGGQASAGPGS DGGGGQRGGMD WPSLVPDCSPGAAVAGTSE RRLDELDIALRLAKHSGDASPLLRREVVLALG+LVLNPAHFPFFVTVAQELAINRAAXXXXXXXXXXXXXXXXXXXXXXXXX  S+SSC AECG+ NVSP  QSGSRGS VAGGGGL GRLSTSPPLRSSRWVLPSPRLSSSVNS SGVALGGIGSHGG WRG DANC DAG          XXXXXXXQW ARA D NSVARGLVPGKIGW GGSV CADREQQQATPNL EGVLQSVGAEAAQHYA
Sbjct:  502 VELVKHRAYVNFIKHLRWEDMPAQQRVFAAFVLACIMDGYRQGQEACLQHLLHNICWTLLNTDTDSDTEVL---------SSDPSLRDPSVRMWLCLCLAKLCWQYTDAQDACVRLDIQGSLFACLERKDGGPGQRQGAPMMGVGGQASAGPGSTDGGGGQRGGMDAWPSLVPDCSPGAAVAGTSETRRLDELDIALRLAKHSGDASPLLRREVVLALGLLVLNPAHFPFFVTVAQELAINRAAXXXXXXXXXXXXXXXXXXXXXXXXXXXSQSSCRAECGESNVSPQRQSGSRGSAVAGGGGLAGRLSTSPPLRSSRWVLPSPRLSSSVNSSSGVALGGIGSHGGGWRGGDANCSDAGXX--XXXXXXXXXXXXXQWRARAEDVNSVARGLVPGKIGWGGGSVVCADREQQQATPNLNEGVLQSVGAEAAQHYA 925
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BLAST of mRNA_Ecto-sp13_S_contig1516.3888.1 vs. uniprot
Match: A0A6H5KBF0_9PHAE (Raptor_N domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBF0_9PHAE)

HSP 1 Score: 597 bits (1540), Expect = 2.300e-193
Identity = 387/629 (61.53%), Postives = 395/629 (62.80%), Query Frame = 1 
Query:    1 VELVKHRAYVNFIKHLRWEDMPAQQRVFAAFVLACIMDGYRPGQEACLQHLLHNICWTLLNTDTDSDTEVLRRP----------------------HR*------------------------------GQRSSDPSLRDPSVRMWLCLCLAKLCWQYTDAQDACVRLDIQGSLFTCLERK-----------------------------------------------------------------------------------------------------------------------------------------NGGPGQRQGAPMMGVGGQASAGPGSNDGGGGQRGGMDVWPSLVPDCSPGAAVAGTSEMRRLDELDIALRLAKHSGDASPLLRREVVLALGVLVLNPAHFPFFVTVAQELAINRAAXXXXXXXXXXXXXXXXXXXXXXXXXSESSCPAECGDRNVSPPPQSGSRGSTVAGGGGLMGRLSTSPPLRSSRWVLPSPRLSSSVNSCSGVALGGIGSHGGAWRGADANCGDAGGSGTTDWSTQXXXXXXX-------QWPARAGDANSVARGLVPGKIGWRGGSVGCADREQQQATPNLGEGVLQSVGAEAAQHYA 1299
            VELVKHRAYVNFIKHLRWEDMPAQQRVFAAFVLACIMDGYRPGQEACLQHLLHNICWTLLNTD DSDTE +  P                      HR                               GQRSSDPSLR PSVRMWLCLCLAKLCWQYTDAQDACVRLDIQGSLF CLERK                                                                                                                                         +GGPGQRQGA MMGVGGQASAGPGS +GGGG +GGMD WPSLVPDCSPGAAVAGTSE RRLDELDIALRLAKHSGDASPLLRREVVLALGVLVLNPAHFPFFVTVAQELAINRAAXXXXXXXXXXXXXXXXXXXXXXXXXS+SSC AECGD NVSP  QS +RGS VAGGGGL G LS SP LRSSRWV PSPRLSSSVN+ +G ALGGIGSHGG WRGADANCGDAGGSGTTD STQ   XXXX       QW  RA DANSVARGLVPGKIGW G SVGCADREQQQAT NL EGVLQSVGAEAA HYA
Sbjct:  738 VELVKHRAYVNFIKHLRWEDMPAQQRVFAAFVLACIMDGYRPGQEACLQHLLHNICWTLLNTDADSDTEDVTSPIEPGAAGEGGGGTGPPRLGSPNHRSFAGSPPPPIGGGTXXXXXXXXXXXXXXXXRGQRSSDPSLRHPSVRMWLCLCLAKLCWQYTDAQDACVRLDIQGSLFACLERKVETVEVRCAAVYALGSLYSREIIAHPEAGAATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGGVREGGPFQPAAPPPGQQQQQARIGAVLPPGLGRVAQGGGVGTPMFXXXXXXXXXXIVGRQDGGPGQRQGAQMMGVGGQASAGPGSTNGGGGHKGGMDAWPSLVPDCSPGAAVAGTSETRRLDELDIALRLAKHSGDASPLLRREVVLALGVLVLNPAHFPFFVTVAQELAINRAAXXXXXXXXXXXXXXXXXXXXXXXXXSQSSCRAECGDSNVSPQRQSWNRGSAVAGGGGLAGHLSKSPALRSSRWVPPSPRLSSSVNNSNGFALGGIGSHGGGWRGADANCGDAGGSGTTDGSTQHQHXXXXXXXXXXXQWRGRAEDANSVARGLVPGKIGW-GESVGCADREQQQATLNLSEGVLQSVGAEAAHHYA 1365
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BLAST of mRNA_Ecto-sp13_S_contig1516.3888.1 vs. uniprot
Match: A0A836CAT4_9STRA (Raptor_N domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAT4_9STRA)

HSP 1 Score: 119 bits (297), Expect = 6.100e-25
Identity = 89/250 (35.60%), Postives = 114/250 (45.60%), Query Frame = 1 
Query:    4 ELVKHRAYVNFIKHLRWEDMPAQQRVFAAFVLACIMDGYRPGQEACLQHLLHNICWTLLNTDTDSDTEVLRRPHR*GQRSSDPSLR-DPSVRMWLCLCLAKLCWQYTDAQDACVRLDIQGSLFTCLERKNGGPGQRQGAPMMGVG----GQASAGPGSNDGGGGQRGGMDVWPSLVPDCS-----PGAAVA--------------GTSEMRRLDELDIALRLAKHSGDASPLLRREVVLALGVLVLNPAH 681
            +LVK  A++ FI HL W +   QQ V AAF+LA +MD +  GQ ACL+  LH  C  LL        E    P R G           P +R WLCLCLAKLCW   +A+ A +R   Q S   CL   +G P  R  A          G+A A                  PS  P+ +     PGA +               G    RR  +L +A+ LA+  GD SPL+RRE VLAL ++ +NPAH
Sbjct:  573 DLVKDGAHMYFIGHLAWAEARPQQSVIAAFILAAVMDSHPAGQAACLREGLHRSCAALL--------EAQLAPARGGSXXXXXXXXXSPLLRRWLCLCLAKLCWGLPEARAAVLRDGAQRSALACLA--DGTPEVRCAAAYAAAALLSCGEARA------------------PSWAPEGAAASPPPGAGLMRPDFGRLPQQVEGRGAEAARRQADLAMAVLLAERCGDGSPLVRREAVLALAIMAVNPAH 794
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BLAST of mRNA_Ecto-sp13_S_contig1516.3888.1 vs. uniprot
Match: A0A4D9DFT2_9STRA (Raptor_N domain-containing protein n=5 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DFT2_9STRA)

HSP 1 Score: 93.6 bits (231), Expect = 1.410e-16
Identity = 83/271 (30.63%), Postives = 113/271 (41.70%), Query Frame = 1 
Query:    4 ELVKHRAYVNFIKHLRWEDMPAQQRVFAAFVLACIMDGYRPGQEACLQHLLHNICWTLLNTDTDSDTEVLRRPHR*GQRSSDPSLRDPSVRMWLCLCLAKLCWQYTDAQDACVRLDIQGSLFTCLERKNGGPGQRQGAPMMGVGGQASAGPGSNDG-GGGQRGGMDVWPSLVPDC------------------------SPG---------AAVAGTSEMRRLDELDIALRLAKHSGDASPLLRREVVLALGVLVLNPAHFPFFVTVAQEL 714
            +LVK  AY+ FI HL   D+  +QRV AAF+++ IMD  R GQ  CL+  +   C   L +    +TE +                 P  R WLC CL +L + Y + + AC+R DI   LF  L           G+P + V   A    G+  G GGGQ GG                                   SPG         AA       R+ D   I L + +   D SP++RR+ + AL +LV +  HF +FV VA EL
Sbjct:  615 DLVKDNAYLYFIGHLSGADVRPEQRVLAAFIVSAIMDESRSGQRDCLKKGVQRTCAHFLFS---KETEGI-----------------PEFRRWLCFCLGRLAFDYVEGKVACLREDIHLHLFGLL-----------GSPHVAVRAAAVHTLGTFLGSGGGQPGGXXXXXXXXXXXXXXXXXXXLSSMSSPTSEVGTLGSSPGGGRSPSTGRAASIDLEAARKTDVSVIGLPMLRAFDDVSPMVRRQAIFALFLLVTDSTHFSYFVWVAHEL 854
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BLAST of mRNA_Ecto-sp13_S_contig1516.3888.1 vs. uniprot
Match: A0A445AL20_ARAHY (Raptor_N domain-containing protein n=4 Tax=Arachis TaxID=3817 RepID=A0A445AL20_ARAHY)

HSP 1 Score: 78.6 bits (192), Expect = 9.280e-12
Identity = 70/219 (31.96%), Postives = 96/219 (43.84%), Query Frame = 1 
Query:    1 VELVKHRAYVNFIKHLRWEDMPAQQRVFAAFVLACIMDGYRPGQEACLQHLLHNICWTLLNTDTDSDTEVLRRPHR*GQRSSDPSLRDPSVRMWLCLCLAKLCWQYTDAQDACVRLDIQGSLFTCLERKNGGPGQRQGAPMMGVGGQASAGPGSNDGGGGQRGGMDVWPSLVPDCSPGAAVAGTSEMRRLDELDIALRLAKHSGDASPLLRREVVLALG 657
            V+LVK   ++ FIK L   +   +QR  AAFVLA I+DGYR GQEAC++  L ++C   L + + +D++                  +P    WLCLCL KL   +T+AQ   ++ D      + L      P  R  A +  +G   + G     G GG             DC          E  R D   I   L   S D SPL+R EV +ALG
Sbjct:  595 VDLVKDGGHIYFIKFLDRMEAYPEQRAMAAFVLAVIVDGYRRGQEACIEAGLIHVCLKHLQSSSPNDSQT-----------------EPLFLQWLCLCLGKLWDDFTEAQIIGLQEDAVSIYVSLLSEPQ--PEVRASA-VFALGTLLNVGVDYCRGAGGDE-----------DCDD-------DEKCRAD-FSIVKNLLSVSSDGSPLVRAEVAVALG 774
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BLAST of mRNA_Ecto-sp13_S_contig1516.3888.1 vs. uniprot
Match: A0A445EA02_ARAHY (Raptor_N domain-containing protein n=5 Tax=Arachis TaxID=3817 RepID=A0A445EA02_ARAHY)

HSP 1 Score: 78.6 bits (192), Expect = 9.460e-12
Identity = 70/219 (31.96%), Postives = 96/219 (43.84%), Query Frame = 1 
Query:    1 VELVKHRAYVNFIKHLRWEDMPAQQRVFAAFVLACIMDGYRPGQEACLQHLLHNICWTLLNTDTDSDTEVLRRPHR*GQRSSDPSLRDPSVRMWLCLCLAKLCWQYTDAQDACVRLDIQGSLFTCLERKNGGPGQRQGAPMMGVGGQASAGPGSNDGGGGQRGGMDVWPSLVPDCSPGAAVAGTSEMRRLDELDIALRLAKHSGDASPLLRREVVLALG 657
            V+LVK   ++ FIK L   +   +QR  AAFVLA I+DGYR GQEAC++  L ++C   L + + +D++                  +P    WLCLCL KL   +T+AQ   ++ D      + L      P  R  A +  +G   + G     G GG             DC          E  R D   I   L   S D SPL+R EV +ALG
Sbjct:  716 VDLVKDGGHIYFIKFLDRMEAYPEQRAMAAFVLAVIVDGYRRGQEACIEAGLIHVCLKHLQSSSPNDSQT-----------------EPLFLQWLCLCLGKLWDDFTEAQIIGLQEDAVSIYVSLLSEPQ--PEVRASA-VFALGTLLNVGVDYCRGAGGDE-----------DCDD-------DEKCRAD-FSIVKNLLSVSSDGSPLVRAEVAVALG 895
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BLAST of mRNA_Ecto-sp13_S_contig1516.3888.1 vs. uniprot
Match: A0A5D6YCM0_9STRA (Raptor_N domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YCM0_9STRA)

HSP 1 Score: 77.4 bits (189), Expect = 2.180e-11
Identity = 74/225 (32.89%), Postives = 93/225 (41.33%), Query Frame = 1 
Query:   61 MPAQQRVFAAFVLACIMDGYRPGQEACLQHLLHNICWTLLNTDTDSDTEVLRRPHR*GQRSSDPSLRDPSVRMWLCLCLAKLCWQYTDAQDACVRLDIQGSLFTCLERKNGGPGQRQGAPMMGVGGQASAGPGSNDGGGGQRGGMDVWPSLVPDCSPGAAVAGTSE--------MRRLDELDIALRLAKHSGDASPLLRREVVLALGVLVLNPAHFPFFVTVAQE 711
            +PA Q+V +AFVL+ I D    GQ +CL   LH IC  LL  D   D                       VR W+CLCLAKL   Y D +   V +D Q      L   +  P  R  A                    G   G+ V  +LV       A AG  E         R  D++ IA  L +   DASPL+RRE VLAL  +VL+  H P F +VA+ 
Sbjct:  515 VPADQKVMSAFVLSVICDNCVQGQRSCLAQYLHKICSNLL-ADAHED-----------------------VRKWVCLCLAKLWENYEDGKR--VAIDDQVPRILSLRLSDERPEVRAAAAFAF----------------GALLGLQVDATLV-------AKAGGDEHRVDDYVRRRARDDIVIATGLLRACQDASPLVRRETVLALANVVLHTYHQPRFESVAKH 690
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BLAST of mRNA_Ecto-sp13_S_contig1516.3888.1 vs. uniprot
Match: A0A484L4A8_9ASTE (Raptor_N domain-containing protein n=1 Tax=Cuscuta campestris TaxID=132261 RepID=A0A484L4A8_9ASTE)

HSP 1 Score: 76.6 bits (187), Expect = 3.780e-11
Identity = 69/219 (31.51%), Postives = 93/219 (42.47%), Query Frame = 1 
Query:    1 VELVKHRAYVNFIKHLRWEDMPAQQRVFAAFVLACIMDGYRPGQEACLQHLLHNICWTLLNTDTDSDTEVLRRPHR*GQRSSDPSLRDPSVRMWLCLCLAKLCWQYTDAQDACVRLDIQGSLFTCLERKNGGPGQRQGAPMMGVGGQASAGPG-SNDGGGGQRGGMDVWPSLVPDCSPGAAVAGTSEMRRLDELDIALRLAKHSGDASPLLRREVVLAL 654
            V+LVK   +  F + L   D   +QR  AAFVLA I+DGYR GQEAC++  L ++C   L     +DT+                  +P    WLCLCL KL   +T+AQ   ++ D        L        + +GA +  +G     G G SNDG GG     DV   +                    E+ I   L     D SPL+R EV +AL
Sbjct:  536 VDLVKDGGHTYFTRFLDSIDAYPEQRAMAAFVLAVIVDGYRRGQEACIEAGLLHVCLRHLQGSASNDTQT-----------------EPLFLQWLCLCLGKLWEDFTEAQMIAIQSDAPVIFAPLLSAPQP---EVRGAVVFALGTLLDIGFGTSNDGVGGDED-SDVDEKVKA------------------EVSILKSLMSAVSDGSPLVRAEVAVAL 715
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BLAST of mRNA_Ecto-sp13_S_contig1516.3888.1 vs. uniprot
Match: A0A1S3Y097_TOBAC (regulatory-associated protein of TOR 1-like n=11 Tax=Nicotiana TaxID=4085 RepID=A0A1S3Y097_TOBAC)

HSP 1 Score: 76.3 bits (186), Expect = 4.780e-11
Identity = 46/128 (35.94%), Postives = 62/128 (48.44%), Query Frame = 1 
Query:    1 VELVKHRAYVNFIKHLRWEDMPAQQRVFAAFVLACIMDGYRPGQEACLQHLLHNICWTLLNTDTDSDTEVLRRPHR*GQRSSDPSLRDPSVRMWLCLCLAKLCWQYTDAQDACVRLDIQGSLFTCLER 384
            V+LVK   +V FI+ L   D   +QR  AAFVLA I+DGYR GQEAC++  L N+C   L     +D +                  +P    WLCLCL KL   +T+AQ   ++ D        L +
Sbjct:  469 VDLVKDGGHVYFIRFLDSVDAYPEQRAMAAFVLAVIIDGYRQGQEACIEAGLINVCLKHLQGSIPNDAQT-----------------EPLFLQWLCLCLGKLWEDFTEAQVLGLQADAPAIFVPLLSQ 579
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BLAST of mRNA_Ecto-sp13_S_contig1516.3888.1 vs. uniprot
Match: A0A1U7YBA5_NICSY (regulatory-associated protein of TOR 1 isoform X4 n=1 Tax=Nicotiana sylvestris TaxID=4096 RepID=A0A1U7YBA5_NICSY)

HSP 1 Score: 76.3 bits (186), Expect = 4.800e-11
Identity = 46/128 (35.94%), Postives = 62/128 (48.44%), Query Frame = 1 
Query:    1 VELVKHRAYVNFIKHLRWEDMPAQQRVFAAFVLACIMDGYRPGQEACLQHLLHNICWTLLNTDTDSDTEVLRRPHR*GQRSSDPSLRDPSVRMWLCLCLAKLCWQYTDAQDACVRLDIQGSLFTCLER 384
            V+LVK   +V FI+ L   D   +QR  AAFVLA I+DGYR GQEAC++  L N+C   L     +D +                  +P    WLCLCL KL   +T+AQ   ++ D        L +
Sbjct:  527 VDLVKDGGHVYFIRFLDSVDAYPEQRAMAAFVLAVIIDGYRQGQEACIEAGLINVCLKHLQGSIPNDAQT-----------------EPLFLQWLCLCLGKLWEDFTEAQVLGLQADAPAIFVPLLSQ 637
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1516.3888.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FIL6_ECTSI6.700e-23589.43Raptor n=1 Tax=Ectocarpus siliculosus TaxID=2880 R... [more]
A0A6H5KBF0_9PHAE2.300e-19361.53Raptor_N domain-containing protein n=1 Tax=Ectocar... [more]
A0A836CAT4_9STRA6.100e-2535.60Raptor_N domain-containing protein n=1 Tax=Tribone... [more]
A0A4D9DFT2_9STRA1.410e-1630.63Raptor_N domain-containing protein n=5 Tax=Monodop... [more]
A0A445AL20_ARAHY9.280e-1231.96Raptor_N domain-containing protein n=4 Tax=Arachis... [more]
A0A445EA02_ARAHY9.460e-1231.96Raptor_N domain-containing protein n=5 Tax=Arachis... [more]
A0A5D6YCM0_9STRA2.180e-1132.89Raptor_N domain-containing protein n=1 Tax=Pythium... [more]
A0A484L4A8_9ASTE3.780e-1131.51Raptor_N domain-containing protein n=1 Tax=Cuscuta... [more]
A0A1S3Y097_TOBAC4.780e-1135.94regulatory-associated protein of TOR 1-like n=11 T... [more]
A0A1U7YBA5_NICSY4.800e-1135.94regulatory-associated protein of TOR 1 isoform X4 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1516contigEcto-sp13_S_contig1516:2006..5196 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score513.8
Seed ortholog evalue6e-143
Seed eggNOG ortholog2880.D7FIL6
Preferred nameRPTOR
Model size1299
KEGG koko:K07204
KEGG Pathwayko04136,ko04138,ko04140,ko04150,ko04151,ko04152,ko04211,ko04213,ko04714,ko04910,ko05206,map04136,map04138,map04140,map04150,map04151,map04152,map04211,map04213,map04714,map04910,map05206
Hectar predicted targeting categorysignal peptide
GOsGO:0000003,GO:0000151,GO:0000182,GO:0000323,GO:0001016,GO:0001025,GO:0001030,GO:0001031,GO:0001032,GO:0001067,GO:0001101,GO:0001156,GO:0001558,GO:0001932,GO:0001933,GO:0001934,GO:0001936,GO:0001938,GO:0002165,GO:0002791,GO:0002792,GO:0003006,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003723,GO:0003725,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004525,GO:0004540,GO:0004857,GO:0004860,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005764,GO:0005773,GO:0005776,GO:0005829,GO:0006139,GO:0006355,GO:0006359,GO:0006396,GO:0006469,GO:0006725,GO:0006807,GO:0006914,GO:0006950,GO:0007049,GO:0007050,GO:0007154,GO:0007165,GO:0007166,GO:0007167,GO:0007169,GO:0007275,GO:0007276,GO:0007281,GO:0007292,GO:0007346,GO:0007399,GO:0007517,GO:0007552,GO:0007562,GO:0007568,GO:0008047,GO:0008134,GO:0008150,GO:0008152,GO:0008219,GO:0008284,GO:0008286,GO:0008340,GO:0008361,GO:0008582,GO:0009056,GO:0009267,GO:0009605,GO:0009653,GO:0009719,GO:0009725,GO:0009790,GO:0009791,GO:0009793,GO:0009886,GO:0009888,GO:0009889,GO:0009891,GO:0009892,GO:0009893,GO:0009894,GO:0009966,GO:0009967,GO:0009987,GO:0009991,GO:0010033,GO:0010073,GO:0010074,GO:0010154,GO:0010243,GO:0010259,GO:0010467,GO:0010468,GO:0010492,GO:0010494,GO:0010506,GO:0010556,GO:0010557,GO:0010562,GO:0010563,GO:0010564,GO:0010604,GO:0010605,GO:0010608,GO:0010623,GO:0010628,GO:0010629,GO:0010646,GO:0010647,GO:0010648,GO:0010720,GO:0010769,GO:0010770,GO:0010799,GO:0010800,GO:0010817,GO:0010975,GO:0010976,GO:0012501,GO:0014070,GO:0016043,GO:0016070,GO:0016241,GO:0016246,GO:0016441,GO:0016458,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0019207,GO:0019209,GO:0019210,GO:0019219,GO:0019220,GO:0019222,GO:0019827,GO:0019887,GO:0019899,GO:0019900,GO:0019901,GO:0019953,GO:0022008,GO:0022402,GO:0022412,GO:0022414,GO:0022603,GO:0022604,GO:0023051,GO:0023052,GO:0023056,GO:0023057,GO:0030154,GO:0030234,GO:0030291,GO:0030295,GO:0030307,GO:0030422,GO:0030674,GO:0031047,GO:0031050,GO:0031053,GO:0031054,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031328,GO:0031329,GO:0031344,GO:0031346,GO:0031399,GO:0031400,GO:0031401,GO:0031461,GO:0031667,GO:0031668,GO:0031669,GO:0031929,GO:0031931,GO:0031974,GO:0031981,GO:0032006,GO:0032008,GO:0032101,GO:0032103,GO:0032147,GO:0032268,GO:0032269,GO:0032270,GO:0032296,GO:0032501,GO:0032502,GO:0032504,GO:0032535,GO:0032868,GO:0032869,GO:0032870,GO:0032879,GO:0032880,GO:0032991,GO:0033135,GO:0033138,GO:0033554,GO:0033673,GO:0033674,GO:0034470,GO:0034641,GO:0034660,GO:0035069,GO:0035096,GO:0035194,GO:0035195,GO:0035196,GO:0035556,GO:0035770,GO:0036464,GO:0038201,GO:0038202,GO:0040008,GO:0040012,GO:0040017,GO:0040029,GO:0042127,GO:0042221,GO:0042325,GO:0042326,GO:0042327,GO:0042594,GO:0043085,GO:0043086,GO:0043170,GO:0043200,GO:0043201,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043331,GO:0043434,GO:0043549,GO:0043565,GO:0044087,GO:0044092,GO:0044093,GO:0044212,GO:0044237,GO:0044238,GO:0044248,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0044877,GO:0045595,GO:0045597,GO:0045664,GO:0045666,GO:0045786,GO:0045787,GO:0045793,GO:0045859,GO:0045860,GO:0045886,GO:0045893,GO:0045926,GO:0045927,GO:0045931,GO:0045935,GO:0045936,GO:0045937,GO:0045945,GO:0046483,GO:0046676,GO:0046883,GO:0046888,GO:0048316,GO:0048468,GO:0048477,GO:0048507,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0048608,GO:0048609,GO:0048638,GO:0048640,GO:0048699,GO:0048707,GO:0048731,GO:0048856,GO:0048869,GO:0050678,GO:0050679,GO:0050708,GO:0050709,GO:0050767,GO:0050769,GO:0050770,GO:0050772,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050796,GO:0050803,GO:0050807,GO:0050896,GO:0050920,GO:0050921,GO:0051046,GO:0051048,GO:0051049,GO:0051051,GO:0051093,GO:0051094,GO:0051128,GO:0051129,GO:0051130,GO:0051171,GO:0051172,GO:0051173,GO:0051174,GO:0051223,GO:0051224,GO:0051239,GO:0051240,GO:0051241,GO:0051246,GO:0051247,GO:0051248,GO:0051252,GO:0051254,GO:0051270,GO:0051272,GO:0051338,GO:0051347,GO:0051348,GO:0051704,GO:0051716,GO:0051726,GO:0051960,GO:0051961,GO:0051962,GO:0051963,GO:0051964,GO:0060033,GO:0060090,GO:0060255,GO:0060284,GO:0061061,GO:0061458,GO:0061919,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070201,GO:0070887,GO:0070918,GO:0071229,GO:0071230,GO:0071233,GO:0071310,GO:0071359,GO:0071375,GO:0071407,GO:0071417,GO:0071495,GO:0071496,GO:0071684,GO:0071704,GO:0071840,GO:0071889,GO:0071900,GO:0071901,GO:0071902,GO:0080008,GO:0080084,GO:0080090,GO:0080134,GO:0080135,GO:0090066,GO:0090068,GO:0090087,GO:0090276,GO:0090278,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0098727,GO:0098772,GO:0120035,GO:0140098,GO:1900034,GO:1900087,GO:1901360,GO:1901363,GO:1901652,GO:1901653,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1901987,GO:1901989,GO:1901990,GO:1901992,GO:1902494,GO:1902531,GO:1902533,GO:1902667,GO:1902669,GO:1902680,GO:1902806,GO:1902808,GO:1903506,GO:1903508,GO:1903530,GO:1903531,GO:1903664,GO:1903666,GO:1904396,GO:1904397,GO:1904950,GO:1905809,GO:1990234,GO:1990837,GO:1990904,GO:2000026,GO:2000045,GO:2000112,GO:2001141
Exons4
EggNOG free text desc.TOR signaling
EggNOG OGsKOG1517@1,KOG1517@2759
Ec32 ortholog descriptionRaptor
Ec32 orthologEc-27_000210.1
Cds size1023
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko04131
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462806.4031491-CDS-Ecto-sp13_S_contig1516:2005..26841681462806.4031491-CDS-Ecto-sp13_S_contig1516:2005..2684Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1516 2006..2684 -
1681462806.4154623-CDS-Ecto-sp13_S_contig1516:3177..34091681462806.4154623-CDS-Ecto-sp13_S_contig1516:3177..3409Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1516 3178..3409 -
1681462806.4275453-CDS-Ecto-sp13_S_contig1516:4233..43451681462806.4275453-CDS-Ecto-sp13_S_contig1516:4233..4345Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1516 4234..4345 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462806.4367056-UTR-Ecto-sp13_S_contig1516:4345..43911681462806.4367056-UTR-Ecto-sp13_S_contig1516:4345..4391Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig1516 4346..4391 -
1681462806.4457254-UTR-Ecto-sp13_S_contig1516:4966..51961681462806.4457254-UTR-Ecto-sp13_S_contig1516:4966..5196Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig1516 4967..5196 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1516.3888.1prot_Ecto-sp13_S_contig1516.3888.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig1516 2006..4345 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig1516.3888.1

>prot_Ecto-sp13_S_contig1516.3888.1 ID=prot_Ecto-sp13_S_contig1516.3888.1|Name=mRNA_Ecto-sp13_S_contig1516.3888.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=341bp
MWLCLCLAKLCWQYTDAQDACVRLDIQGSLFTCLERKNGGPGQRQGAPMM
GVGGQASAGPGSNDGGGGQRGGMDVWPSLVPDCSPGAAVAGTSEMRRLDE
LDIALRLAKHSGDASPLLRREVVLALGVLVLNPAHFPFFVTVAQELAINR
AAAAAAAARKEAARWKSGKGAASNGGGSESSCPAECGDRNVSPPPQSGSR
GSTVAGGGGLMGRLSTSPPLRSSRWVLPSPRLSSSVNSCSGVALGGIGSH
GGAWRGADANCGDAGGSGTTDWSTQQQQQQQQQWPARAGDANSVARGLVP
GKIGWRGGSVGCADREQQQATPNLGEGVLQSVGAEAAQHYA
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mRNA from alignment at Ecto-sp13_S_contig1516:2006..5196-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig1516.3888.1 ID=mRNA_Ecto-sp13_S_contig1516.3888.1|Name=mRNA_Ecto-sp13_S_contig1516.3888.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3191bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1516:2006..5196- (Ectocarpus species13 EcNAP12_S_4_19m)
GTGGAGCTCGTCAAGCACAGGGCATACGTCAACTTCATCAAGCACCTCAG
GTGGGAAGACATGCCGGCGCAGCAGAGAGTGTTCGCGGCCTTCGTCCTGG
CGTGCATCATGGACGGATACCGGCCGGGGCAAGAGGCGTGCCTGCAGCAC
CTGCTGCACAACATCTGCTGGACTCTGCTCAACACGGACACGGACTCTGA
CACCGAGGTGCTGCGCAGGCCCCATCGATAGTAGGGCGGGATTGTTGCAG
GGAATAAACGAAATTTTGGGGTTCTTGGCTGAGTTTGTCGCGTGTTGACG
TTGGCTCCTGTATGTGGTGTCGTTGTTGTTGTTGCTCTTTCGTGGACATG
CGCATGTCTGCTGGGACAGAGGTCGATGGGCGGCAGTGCACTGACCGAGA
GATCAGCTGAGGTTGTAAATCCGCTTGCTTCCTGCTCATGCCGCAGACAC
ACCCACGAACACACGCACGCTCGTTTCGGACTCTGGATTCGACAAACGCG
GAACTAGCCAGCCTTCCGATTATGTGTCCCTGTTATATACCATCCTTCCG
CTCTCCTGAGATGCTCACGACCCCCCCGAACCCCCCGCACCACCCGCACC
CCCGCGTCGCATTCTTTGTGCTGTAGGACGTGACTAGCCCCATCAGACCA
GGAGCAGGTGGGGGGGGGGGGGGGGGCACGGGGCCCCCCCGACTGGGTTC
ACCCAATCACATGTCTTTTGCGGGGTCTCCGCCGCCTCCCATTGGTGGTG
TCAATGGGGGAGGGGGGAGCTCGGGCGGTGGGGCCGGTGGGGGGGGCGGG
GGGAGGGGGCAACGGTCGTCCGACCCGTCCCTGCGGGACCCCTCCGTGCG
CATGTGGCTCTGCCTGTGTCTCGCCAAGCTCTGCTGGCAGTATACCGACG
CGCAGGATGCTTGCGTGCGGCTCGATATCCAGGGCAGCCTCTTCACTTGC
CTGGAGCGGAAAAGTGGGTAGGGGTCACTGTAGTAGGGCCGGCTTTCTGT
CTGTGTTGATGCTGTCTTTTTGGATGACCAATTAGGAGGGCAACCTAGGA
GTACTGCTTTAAGAAGGATTCGAATATCCTCGCATTCGGTGTCGATAGGA
GCGGCATGCGGTTGAGGAAGTGGACCCTCGCAATCCCTTGTTTCGTTCCC
TATCTTTTGTGTGTTCTTTTGGGTCTAGATTTTGCACCGCGCTCACGTTC
TGACGCACACCCCTGCCGATTTTTTCTTTCTTTCTCTCTTTTGACGGCGC
CGACTGCTGTGGAAAGTTGTGGGAAACGGTATGTCGCCGCGGGTTGATTC
TACTCTCATCAGCAGGGGAAAACTAGTGCCGTGTAAGTTTTGAACTTTTG
CTTGTCGCGTTTGTGTTAATTTTGCTTCTGAGCAGCGGAAACCGTCGAGG
TGCGGTGCGCTGCCGTTTACGCGCTGGGGTCCCTGTACAGCCGAGAGATC
ACCGTTAACCCCGAAGCGGGCGCGGCGACGGCGGCAGCGGCAGCGGCGGC
GGCGGCGGCGGCGGCAAGAGGAGCAGGTGCAGCGGCAGCAGCGGCGGCGG
CGTCAGCGGGGGCGGCGGCGTCAGGGGGGGCGACACCCGGGGCAGGGGCA
GGCTGGGGAAGGGAAGGGGGGCCCTTCCAACCGGCAGCTCCTCCCCATGG
GCAGCAACAGCAACAGGCGCGCATCGGCGCCGTGCCCCCCCCCGGGCTCG
GCGGAGTGGCGCAGGGGGGGGGGTTAGGCACGTCGATGATTACGATGATG
CCGATGACGCCCATGGTGCCGATTGTCGGACGACAAGATGGGGGTCCCGG
GCAGCGACAAGGGGCACCAATGATGGGAGTAGGGGGCCAGGCAAGCGCCG
GGCCTGGCTCTAATGATGGAGGCGGCGGGCAGAGAGGGGGGATGGATGTA
TGGCCATCGCTTGTGCCGGACTGCTCTCCGGGGGCGGCGGTTGCTGGAAC
TTCGGAAATGAGGCGGCTGGACGAGCTGGACATCGCCTTGCGGCTGGCGA
AGCATTCTGGGGACGCGAGGTGCGTGTTGGCAACGCGTGCTGTTTTGATT
CGGTTACGGCTTCCGTCTTCTTGCGAGTTGGGCGCGCGTGGGTTTGGCCG
TGGTGTGATTGTGTGTAGGACATGCAGGCAGCATGACAAGCTAGTTGGAG
CTAGATATCGCTGCTGTGTTAGGATTTCGTCCAATTCAAACCAACGTGGC
GTGTTTCACGGTCTGCTATGGAACAGTACAGCAGTACGCCCCTTGCTTCC
TTTCTCGCGTCGGGCGTGTTGGTCTTTCTTGCCCCAACGTTATGGTCCTT
GGAGACATACCTTACTGTAGTGCTCCGGCATGCCGCGGCTTTTGCGGTGC
TATTGGCACCGTTTGATCCGTTCACCGCTTTGACACGCCTCCCGCTTCCC
CACATCCCACTGAGTCGCCACCTGCATCTGTCTCGACCGCACCCCCCTCC
CCCCCCCCCGTGTCTCGCACGGGCTTCGGAAATGCCATTCATGCCAAATT
TGTGACACACAGCCCGCTGCTTCGTCGGGAGGTGGTGCTAGCGCTGGGGG
TGCTCGTGCTCAACCCCGCGCACTTTCCGTTCTTCGTGACGGTTGCGCAA
GAGCTCGCCATCAACCGAGCGGCGGCGGCGGCGGCGGCGGCGAGGAAAGA
AGCGGCCCGTTGGAAGAGCGGGAAGGGCGCCGCGTCGAACGGTGGCGGCA
GCGAGAGCAGCTGCCCCGCCGAATGCGGCGATAGAAATGTTAGCCCGCCG
CCCCAGAGCGGGAGCAGGGGTAGCACCGTCGCCGGCGGCGGCGGGCTCAT
GGGCCGCCTGTCAACGAGCCCGCCCCTGAGGAGCTCTCGCTGGGTGCTGC
CGTCGCCGCGACTGTCGTCATCGGTGAACAGCTGCAGCGGGGTTGCCCTG
GGCGGGATCGGCAGCCATGGAGGGGCGTGGAGGGGGGCCGACGCAAACTG
TGGCGACGCCGGCGGCAGTGGAACCACTGACTGGTCGACGCAGCAGCAGC
AGCAGCAGCAGCAGCAGTGGCCTGCCAGGGCAGGGGACGCGAACTCGGTG
GCCCGGGGTTTGGTTCCCGGGAAGATCGGATGGAGGGGGGGGTCTGTAGG
CTGCGCAGACCGAGAGCAGCAGCAGGCCACCCCAAATCTTGGCGAGGGCG
TGCTGCAGAGCGTCGGGGCTGAGGCCGCACAGCACTACGCC
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1516:2006..5196-

>mRNA_Ecto-sp13_S_contig1516.3888.1 ID=mRNA_Ecto-sp13_S_contig1516.3888.1|Name=mRNA_Ecto-sp13_S_contig1516.3888.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1023bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1516:2006..5196- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGTGGCTCTGCCTGTGTCTCGCCAAGCTCTGCTGGCAGTATACCGACGC
GCAGGATGCTTGCGTGCGGCTCGATATCCAGGGCAGCCTCTTCACTTGCC
TGGAGCGGAAAAATGGGGGTCCCGGGCAGCGACAAGGGGCACCAATGATG
GGAGTAGGGGGCCAGGCAAGCGCCGGGCCTGGCTCTAATGATGGAGGCGG
CGGGCAGAGAGGGGGGATGGATGTATGGCCATCGCTTGTGCCGGACTGCT
CTCCGGGGGCGGCGGTTGCTGGAACTTCGGAAATGAGGCGGCTGGACGAG
CTGGACATCGCCTTGCGGCTGGCGAAGCATTCTGGGGACGCGAGCCCGCT
GCTTCGTCGGGAGGTGGTGCTAGCGCTGGGGGTGCTCGTGCTCAACCCCG
CGCACTTTCCGTTCTTCGTGACGGTTGCGCAAGAGCTCGCCATCAACCGA
GCGGCGGCGGCGGCGGCGGCGGCGAGGAAAGAAGCGGCCCGTTGGAAGAG
CGGGAAGGGCGCCGCGTCGAACGGTGGCGGCAGCGAGAGCAGCTGCCCCG
CCGAATGCGGCGATAGAAATGTTAGCCCGCCGCCCCAGAGCGGGAGCAGG
GGTAGCACCGTCGCCGGCGGCGGCGGGCTCATGGGCCGCCTGTCAACGAG
CCCGCCCCTGAGGAGCTCTCGCTGGGTGCTGCCGTCGCCGCGACTGTCGT
CATCGGTGAACAGCTGCAGCGGGGTTGCCCTGGGCGGGATCGGCAGCCAT
GGAGGGGCGTGGAGGGGGGCCGACGCAAACTGTGGCGACGCCGGCGGCAG
TGGAACCACTGACTGGTCGACGCAGCAGCAGCAGCAGCAGCAGCAGCAGT
GGCCTGCCAGGGCAGGGGACGCGAACTCGGTGGCCCGGGGTTTGGTTCCC
GGGAAGATCGGATGGAGGGGGGGGTCTGTAGGCTGCGCAGACCGAGAGCA
GCAGCAGGCCACCCCAAATCTTGGCGAGGGCGTGCTGCAGAGCGTCGGGG
CTGAGGCCGCACAGCACTACGCC
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