prot_Ecto-sp13_S_contig15138.3877.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig15138.3877.1
Unique Nameprot_Ecto-sp13_S_contig15138.3877.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length213
Homology
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BLAST of mRNA_Ecto-sp13_S_contig15138.3877.1 vs. uniprot
Match: A0A6H5KY69_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY69_9PHAE)

HSP 1 Score: 118 bits (295), Expect = 1.170e-27
Identity = 145/226 (64.16%), Postives = 148/226 (65.49%), Query Frame = 0 
Query:    1 MDARSGSQLALAESQNIQQVDQVRAGLFPTKNPVSARPASSSASPASPSS-------TGGKKSPGGAAAVNXXXXXXXXXXXXXXXXXXXXXXPAPPXXXXXXXXXXXXXXXXXXXXXTAFATPAXXASFSXXXXXAKGGGVVTVGAGQPAGAXXXXXXXXXXXXXXXS------AVDRMMLASPAVSGEASAEASAARVEGTAVPAVVDAEAESLALARQLMEEE 213
            MDARSGSQLALAESQNIQQVDQV AGLFPTKNPVSA  ASSSA+             TG KKS G AAAV+                      PAP XXXXXXXXXXXXXXXXXXXXXTAFATPA  AS  XXXX  K G VVTVG       XXXXXXXXXXXXXXX       AVDRM+LASPA  GE  AEA         VPAVVD EAESLALARQLMEEE
Sbjct:    1 MDARSGSQLALAESQNIQQVDQVGAGLFPTKNPVSASLASSSATXXXXXXXXXXXXXTGDKKSLGVAAAVDSPAQGSFSSKERRPGGRVAASAPAPXXXXXXXXXXXXXXXXXXXXXXTAFATPAAPASXXXXXXPTKAGRVVTVGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVDRMILASPAAFGEGPAEA---------VPAVVDTEAESLALARQLMEEE 217
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BLAST of mRNA_Ecto-sp13_S_contig15138.3877.1 vs. uniprot
Match: D7FY13_ECTSI (Ring finger protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY13_ECTSI)

HSP 1 Score: 72.0 bits (175), Expect = 5.580e-12
Identity = 43/47 (91.49%), Postives = 44/47 (93.62%), Query Frame = 0 
Query:  167 MMLASPAVSGEASAEASAARVEGTAVPAVVDAEAESLALARQLMEEE 213
            MMLASPA SGEASAEASAA VEGTAVP+V DAEAESLALARQLMEEE
Sbjct:    1 MMLASPAASGEASAEASAATVEGTAVPSVGDAEAESLALARQLMEEE 47
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15138.3877.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KY69_9PHAE1.170e-2764.16RING-type domain-containing protein n=1 Tax=Ectoca... [more]
D7FY13_ECTSI5.580e-1291.49Ring finger protein n=1 Tax=Ectocarpus siliculosus... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig15138contigEcto-sp13_S_contig15138:49..2734 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig15138.3877.1mRNA_Ecto-sp13_S_contig15138.3877.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig15138 49..2910 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig15138.3877.1 ID=prot_Ecto-sp13_S_contig15138.3877.1|Name=mRNA_Ecto-sp13_S_contig15138.3877.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=213bp
MDARSGSQLALAESQNIQQVDQVRAGLFPTKNPVSARPASSSASPASPSS
TGGKKSPGGAAAVNSPAQGASSSNERRPGGRIAVSAPAPPATPAVTATTT
TVPTAPAAAAATAFATPAAPASFSTPAAPAKGGGVVTVGAGQPAGAAAAA
AAAAAAGSDDSSAVDRMMLASPAVSGEASAEASAARVEGTAVPAVVDAEA
ESLALARQLMEEE
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