prot_Ecto-sp13_S_contig1511.3859.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1511.3859.1
Unique Nameprot_Ecto-sp13_S_contig1511.3859.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length243
Homology
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BLAST of mRNA_Ecto-sp13_S_contig1511.3859.1 vs. uniprot
Match: A0A6H5JUF8_9PHAE (APG6 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JUF8_9PHAE)

HSP 1 Score: 340 bits (871), Expect = 3.080e-113
Identity = 213/243 (87.65%), Postives = 223/243 (91.77%), Query Frame = 0 
Query:    1 MAYRELQGRLQLAERQVRMYREAMEHLIAAPPAARPAASQPSARPIATTAGAAQESLSKISAGGDNYPGATEPAPGAVPDVATTGGAKAESVAEGDDDSVLDHGRGKTKKEVPRLSSGDAEGAESSAGSTAAGKGPNIWGFIGGAVGWIGEGTAGWMAQSEARREHHRLLEEVGKVRRRRAAVWRERELLAXXXXXXXXXXXXXXXXXXXXXXXXSDVAEARQNCRSRKALYSEQLVSAMRMG 243
            MAYRELQGRLQLAE+QVRMYREAMEHLIAAP AA PAASQ  A PI+TTAG AQE+LSKI AGG+N P  T+PAPGA+PDVATTGGAKAE+VAEGDDDSV DHGRG TKKEVPRLSS DAEGAESSAGSTAA KGP+IWGFIGGAVGWIGEGTAGWMAQSEARREHHRLL EVGKVRRRRAAVW+ERELLA     XXXXXXXXXXXXXXXXXXXSDVA+ARQNCRSRKALYSEQLVSAMRMG
Sbjct:    1 MAYRELQGRLQLAEQQVRMYREAMEHLIAAPSAAYPAASQSRASPISTTAGVAQENLSKIFAGGENDPDNTKPAPGAIPDVATTGGAKAEAVAEGDDDSVSDHGRGGTKKEVPRLSSDDAEGAESSAGSTAAEKGPSIWGFIGGAVGWIGEGTAGWMAQSEARREHHRLLGEVGKVRRRRAAVWQERELLAKARAEXXXXXXXXXXXXXXXXXXXSDVADARQNCRSRKALYSEQLVSAMRMG 243
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1511.3859.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JUF8_9PHAE3.080e-11387.65APG6 domain-containing protein n=2 Tax=Ectocarpus ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 3..30

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1511contigEcto-sp13_S_contig1511:271..3604 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1511.3859.1mRNA_Ecto-sp13_S_contig1511.3859.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1511 271..3604 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1511.3859.1 ID=prot_Ecto-sp13_S_contig1511.3859.1|Name=mRNA_Ecto-sp13_S_contig1511.3859.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=243bp
MAYRELQGRLQLAERQVRMYREAMEHLIAAPPAARPAASQPSARPIATTA
GAAQESLSKISAGGDNYPGATEPAPGAVPDVATTGGAKAESVAEGDDDSV
LDHGRGKTKKEVPRLSSGDAEGAESSAGSTAAGKGPNIWGFIGGAVGWIG
EGTAGWMAQSEARREHHRLLEEVGKVRRRRAAVWRERELLAKTRAELARC
RADLLSRRIALDSRRSDVAEARQNCRSRKALYSEQLVSAMRMG
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