prot_Ecto-sp13_S_contig1510.3854.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1510.3854.1
Unique Nameprot_Ecto-sp13_S_contig1510.3854.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length233
Homology
BLAST of mRNA_Ecto-sp13_S_contig1510.3854.1 vs. uniprot
Match: A0A6H5LB71_9PHAE (PC4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LB71_9PHAE)

HSP 1 Score: 414 bits (1065), Expect = 1.170e-145
Identity = 221/232 (95.26%), Postives = 224/232 (96.55%), Query Frame = 0
Query:    1 MQRFGVSARRRGFQSLLIPSSSSRKLSSFSSGPEHDDYWTAAKTEAQATPAYQQAAAHATAPTPSTPTATGGRWAQPGGPSPVTMPMGEAYKPSSSSNMYGGRSSTSFGRSSNTFNSDSGDFVPPPPTFDMQSSTHLSPVRQADVRSFKGRPLVDIRQYFRGAEGQAVPTKKGIALTIPQWRRLQEAMADIDKEIFALEEQQRSLAAVDAHLLELAEQPFEVGDEGPDKQAP 232
            MQRFGVSARRRGF SLLI SSSSRKLSSFSSGPEHDD+WTAAKTEAQATPAYQQAAA+ATAPTP TPTATG RWAQPGGPSP TMPMGEAYKPSSSS MYGGRSS+S GRSSNTFNSDSGDFVPPPPTFDMQSSTHLSPVRQ DVRSFKGRPLVDIRQYFRGAEGQAVPTKKGIALTIPQWRRLQEAMADIDKEIFALEEQQRSLAAVDAHLLELAEQPFEVGDEGPDKQAP
Sbjct:    1 MQRFGVSARRRGFPSLLIHSSSSRKLSSFSSGPEHDDFWTAAKTEAQATPAYQQAAANATAPTPWTPTATGDRWAQPGGPSPGTMPMGEAYKPSSSSKMYGGRSSSSNGRSSNTFNSDSGDFVPPPPTFDMQSSTHLSPVRQVDVRSFKGRPLVDIRQYFRGAEGQAVPTKKGIALTIPQWRRLQEAMADIDKEIFALEEQQRSLAAVDAHLLELAEQPFEVGDEGPDKQAP 232          
BLAST of mRNA_Ecto-sp13_S_contig1510.3854.1 vs. uniprot
Match: D7FYS7_ECTSI (PC4 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYS7_ECTSI)

HSP 1 Score: 192 bits (489), Expect = 6.480e-60
Identity = 98/102 (96.08%), Postives = 98/102 (96.08%), Query Frame = 0
Query:  131 MQSSTHLSPVRQADVRSFKGRPLVDIRQYFRGAEGQAVPTKKGIALTIPQWRRLQEAMADIDKEIFALEEQQRSLAAVDAHLLELAEQPFEVGDEGPDKQAP 232
            MQSS HLSPVRQADVR FKGRPLVDIRQYFRGAEGQA PTKKGIALTIPQWRRLQEAMADIDKEIFALEEQQRSLAAVDAHLLELAEQPFEVGDE PDKQAP
Sbjct:    1 MQSSMHLSPVRQADVRLFKGRPLVDIRQYFRGAEGQAAPTKKGIALTIPQWRRLQEAMADIDKEIFALEEQQRSLAAVDAHLLELAEQPFEVGDEEPDKQAP 102          
BLAST of mRNA_Ecto-sp13_S_contig1510.3854.1 vs. uniprot
Match: C3ZA15_BRAFL (Activated RNA polymerase II transcriptional coactivator p15 (Fragment) n=1 Tax=Branchiostoma floridae TaxID=7739 RepID=C3ZA15_BRAFL)

HSP 1 Score: 65.9 bits (159), Expect = 7.330e-11
Identity = 34/63 (53.97%), Postives = 45/63 (71.43%), Query Frame = 0
Query:  137 LSPVRQADVRSFKGRPLVDIRQYFRGAEGQAVPTKKGIALTIPQWRRLQEAMADIDKEIFALE 199
            LS  R   VR FKG+ L+DIR+Y+  A G+  P KKGI+LT  QWRRL+EA+ DID++I  L+
Sbjct:    3 LSNKRYVSVREFKGKCLIDIREYY-DAGGELKPGKKGISLTTDQWRRLKEAVDDIDEKIADLD 64          
BLAST of mRNA_Ecto-sp13_S_contig1510.3854.1 vs. uniprot
Match: A8D8C5_ARTSF (RNA polymerase II transcriptional coactivator n=1 Tax=Artemia franciscana TaxID=6661 RepID=A8D8C5_ARTSF)

HSP 1 Score: 66.6 bits (161), Expect = 1.120e-10
Identity = 29/66 (43.94%), Postives = 45/66 (68.18%), Query Frame = 0
Query:  130 DMQSSTHLSPVRQADVRSFKGRPLVDIRQYFRGAEGQAVPTKKGIALTIPQWRRLQEAMADIDKEI 195
            D + +  L   R   VRSFKG+  VDIR+Y+  A G  +P KKGI+L++ QW+++QEAM ++D+ +
Sbjct:   40 DEEPTWTLDKKRFLKVRSFKGKTFVDIREYYEDASGNLMPGKKGISLSVQQWKKVQEAMDEVDEAL 105          
BLAST of mRNA_Ecto-sp13_S_contig1510.3854.1 vs. uniprot
Match: A0A6P4Z2T7_BRABE (Activated RNA polymerase II transcriptional coactivator p15 n=2 Tax=Branchiostoma TaxID=7737 RepID=A0A6P4Z2T7_BRABE)

HSP 1 Score: 65.9 bits (159), Expect = 2.390e-10
Identity = 33/59 (55.93%), Postives = 43/59 (72.88%), Query Frame = 0
Query:  137 LSPVRQADVRSFKGRPLVDIRQYFRGAEGQAVPTKKGIALTIPQWRRLQEAMADIDKEI 195
            LS  R   VR FKG+ L+DIR+Y+  A G+  P KKGI+LT  QWRRL+E+M DID++I
Sbjct:   50 LSNKRYVSVREFKGKCLIDIREYY-DAGGELKPGKKGISLTTDQWRRLKESMDDIDEKI 107          
BLAST of mRNA_Ecto-sp13_S_contig1510.3854.1 vs. uniprot
Match: UPI0016041207 (activated RNA polymerase II transcriptional coactivator p15-like isoform X2 n=1 Tax=Branchiostoma floridae TaxID=7739 RepID=UPI0016041207)

HSP 1 Score: 65.9 bits (159), Expect = 2.450e-10
Identity = 34/63 (53.97%), Postives = 45/63 (71.43%), Query Frame = 0
Query:  137 LSPVRQADVRSFKGRPLVDIRQYFRGAEGQAVPTKKGIALTIPQWRRLQEAMADIDKEIFALE 199
            LS  R   VR FKG+ L+DIR+Y+  A G+  P KKGI+LT  QWRRL+EA+ DID++I  L+
Sbjct:   51 LSNKRYVSVREFKGKCLIDIREYY-DAGGELKPGKKGISLTTDQWRRLKEAVDDIDEKIADLD 112          
BLAST of mRNA_Ecto-sp13_S_contig1510.3854.1 vs. uniprot
Match: A0A1X7U2Q5_AMPQE (PC4 domain-containing protein n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7U2Q5_AMPQE)

HSP 1 Score: 65.1 bits (157), Expect = 4.640e-10
Identity = 30/66 (45.45%), Postives = 45/66 (68.18%), Query Frame = 0
Query:  130 DMQSSTHLSPVRQADVRSFKGRPLVDIRQYFRGAEGQAVPTKKGIALTIPQWRRLQEAMADIDKEI 195
            D +    LS  R  +VR+FKGR ++DIR+Y+   +G+  P KKGI+L++ QW +L+EAM  ID+ I
Sbjct:   44 DTEELIPLSAKRFVNVRTFKGRIMIDIREYYVNDDGENRPGKKGISLSVDQWEKLKEAMETIDERI 109          
BLAST of mRNA_Ecto-sp13_S_contig1510.3854.1 vs. uniprot
Match: UPI001ED87873 (activated RNA polymerase II transcriptional coactivator p15 n=1 Tax=Ischnura elegans TaxID=197161 RepID=UPI001ED87873)

HSP 1 Score: 64.7 bits (156), Expect = 6.020e-10
Identity = 29/62 (46.77%), Postives = 47/62 (75.81%), Query Frame = 0
Query:  134 STHLSPVRQADVRSFKGRPLVDIRQYFRGAEGQAVPTKKGIALTIPQWRRLQEAMADIDKEI 195
            S HL  ++ A VR+F+G+  VDIR+Y++ ++G+  P KKGI+L++ QWRR++E M +ID+ I
Sbjct:   46 SWHLEKMKYAKVRTFQGKVYVDIREYYQ-SDGKMKPGKKGISLSVDQWRRIKELMPEIDEAI 106          
BLAST of mRNA_Ecto-sp13_S_contig1510.3854.1 vs. uniprot
Match: A0A8C4ZD74_GADMO (Activated RNA polymerase II transcriptional coactivator p15 n=2 Tax=Gadus morhua TaxID=8049 RepID=A0A8C4ZD74_GADMO)

HSP 1 Score: 65.1 bits (157), Expect = 6.620e-10
Identity = 28/66 (42.42%), Postives = 44/66 (66.67%), Query Frame = 0
Query:  130 DMQSSTHLSPVRQADVRSFKGRPLVDIRQYFRGAEGQAVPTKKGIALTIPQWRRLQEAMADIDKEI 195
            D+ S + +  +R   VR FKG+ LVDIR+Y+   +G+  P KKGI+L   QW +L+E ++DID+ +
Sbjct:   59 DLLSVSQIGKMRYVSVRDFKGKTLVDIREYWMNPDGEMKPGKKGISLNAEQWSQLKEQISDIDEAV 124          
BLAST of mRNA_Ecto-sp13_S_contig1510.3854.1 vs. uniprot
Match: A0A8H8CPF0_PSICU (PC4 domain-containing protein n=1 Tax=Psilocybe cubensis TaxID=181762 RepID=A0A8H8CPF0_PSICU)

HSP 1 Score: 65.5 bits (158), Expect = 8.400e-10
Identity = 31/57 (54.39%), Postives = 43/57 (75.44%), Query Frame = 0
Query:  137 LSPVRQADVRSFKGRPLVDIRQYFRGAEGQAVPTKKGIALTIPQWRRLQEAMADIDK 193
            L   ++A VRSFKG PL+DIR+++ GA+G   P KKGI+LTI QW+ L++ M+ IDK
Sbjct:   90 LGKKKRATVRSFKGVPLIDIREFY-GADGDEKPGKKGISLTIEQWQSLRDGMSTIDK 145          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1510.3854.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5LB71_9PHAE1.170e-14595.26PC4 domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FYS7_ECTSI6.480e-6096.08PC4 domain-containing protein n=1 Tax=Ectocarpus s... [more]
C3ZA15_BRAFL7.330e-1153.97Activated RNA polymerase II transcriptional coacti... [more]
A8D8C5_ARTSF1.120e-1043.94RNA polymerase II transcriptional coactivator n=1 ... [more]
A0A6P4Z2T7_BRABE2.390e-1055.93Activated RNA polymerase II transcriptional coacti... [more]
UPI00160412072.450e-1053.97activated RNA polymerase II transcriptional coacti... [more]
A0A1X7U2Q5_AMPQE4.640e-1045.45PC4 domain-containing protein n=1 Tax=Amphimedon q... [more]
UPI001ED878736.020e-1046.77activated RNA polymerase II transcriptional coacti... [more]
A0A8C4ZD74_GADMO6.620e-1042.42Activated RNA polymerase II transcriptional coacti... [more]
A0A8H8CPF0_PSICU8.400e-1054.39PC4 domain-containing protein n=1 Tax=Psilocybe cu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 198..218
NoneNo IPR availablePANTHERPTHR13215RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATORcoord: 70..200
NoneNo IPR availablePANTHERPTHR13215:SF0ACTIVATED RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR P15coord: 70..200
IPR009044ssDNA-binding transcriptional regulatorGENE3D2.30.31.10coord: 133..198
e-value: 3.9E-20
score: 73.1
IPR009044ssDNA-binding transcriptional regulatorSUPERFAMILY54447ssDNA-binding transcriptional regulator domaincoord: 136..195
IPR003173Transcriptional coactivator p15 (PC4)PFAMPF02229PC4coord: 136..187
e-value: 1.1E-16
score: 60.1

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1510contigEcto-sp13_S_contig1510:8661..9359 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1510.3854.1mRNA_Ecto-sp13_S_contig1510.3854.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1510 8661..9359 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1510.3854.1 ID=prot_Ecto-sp13_S_contig1510.3854.1|Name=mRNA_Ecto-sp13_S_contig1510.3854.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=233bp
MQRFGVSARRRGFQSLLIPSSSSRKLSSFSSGPEHDDYWTAAKTEAQATP
AYQQAAAHATAPTPSTPTATGGRWAQPGGPSPVTMPMGEAYKPSSSSNMY
GGRSSTSFGRSSNTFNSDSGDFVPPPPTFDMQSSTHLSPVRQADVRSFKG
RPLVDIRQYFRGAEGQAVPTKKGIALTIPQWRRLQEAMADIDKEIFALEE
QQRSLAAVDAHLLELAEQPFEVGDEGPDKQAP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009044ssDNA-bd_transcriptional_reg
IPR003173PC4