prot_Ecto-sp13_S_contig15097.3849.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig15097.3849.1
Unique Nameprot_Ecto-sp13_S_contig15097.3849.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length99
Homology
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BLAST of mRNA_Ecto-sp13_S_contig15097.3849.1 vs. uniprot
Match: D7FRZ1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRZ1_ECTSI)

HSP 1 Score: 147 bits (370), Expect = 1.230e-40
Identity = 74/95 (77.89%), Postives = 81/95 (85.26%), Query Frame = 0 
Query:    1 MCDTLDVRASDGGPGPAFHPGERTAMVLCRLGHGAGERAMAALFGVSDGCVSSCTSDFLTRVAERFVPRFLSS-PTRNDQDDISAAFERRTGYSG 94
            + DTLDVRASDGG GPAFHP ERTAMVL RLGHGAG RA AALFGVSDG V+SCT +F+TRV  R +PRFL S PTRNDQD+ISAAFERRTG+ G
Sbjct:   56 LYDTLDVRASDGGRGPAFHPCERTAMVLYRLGHGAGARATAALFGVSDGWVTSCTCEFITRVTARLIPRFLWSWPTRNDQDNISAAFERRTGFRG 150
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15097.3849.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FRZ1_ECTSI1.230e-4077.89Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig15097contigEcto-sp13_S_contig15097:3058..3918 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig15097.3849.1mRNA_Ecto-sp13_S_contig15097.3849.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig15097 1448..3954 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig15097.3849.1 ID=prot_Ecto-sp13_S_contig15097.3849.1|Name=mRNA_Ecto-sp13_S_contig15097.3849.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=99bp
MCDTLDVRASDGGPGPAFHPGERTAMVLCRLGHGAGERAMAALFGVSDGC
VSSCTSDFLTRVAERFVPRFLSSPTRNDQDDISAAFERRTGYSGYLRS*
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