prot_Ecto-sp13_S_contig15089.3846.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig15089.3846.1
Unique Nameprot_Ecto-sp13_S_contig15089.3846.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length113
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig15089.3846.1 vs. uniprot
Match: D8LHL8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHL8_ECTSI)

HSP 1 Score: 153 bits (387), Expect = 5.830e-41
Identity = 79/113 (69.91%), Postives = 88/113 (77.88%), Query Frame = 0 
Query:    1 MFIDGLYEGEIRSTFHTKVGEQPDKLTLELAEGFTSYNENLIYLPPPLELKSVDAGKGWAQLGYH---GKPVAVAILFEDPSIDAPGTEIFHGFTTHLVVKGTGFHNQGSIKR 110
            MF+ GL  GEI ST HTKVGEQPD+LTLELA+G T YN++  YLP PLELKSVD GKGWAQLG     GKP+ VAI+FEDPSIDA  TEIFHG TT LVVKGT F ++  IKR
Sbjct:  100 MFMSGLCGGEISSTIHTKVGEQPDELTLELAQGSTWYNQDPAYLPRPLELKSVDDGKGWAQLGPTDGPGKPLTVAIVFEDPSIDASDTEIFHGHTTDLVVKGTSFRHRRIIKR 212
[Close]
BLAST of mRNA_Ecto-sp13_S_contig15089.3846.1 vs. uniprot
Match: A0A6H5JNN1_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNN1_9PHAE)

HSP 1 Score: 57.8 bits (138), Expect = 2.390e-7
Identity = 34/82 (41.46%), Postives = 45/82 (54.88%), Query Frame = 0 
Query:   25 KLTLELAEGFTSYNENLIYLPPPLELKSVDAGKGWAQLGYHG--KPVAVAILFEDPSIDAPGTEIFHGFTTHLVVKGTGFHN 104
            K++L L +  +   +   +LP  L + SV A  G    G+ G      VAI+FEDPSI A  TEI+ G T  L V GTGF+N
Sbjct:  255 KVSLNLPQPLSVLPQGPSFLPMALLVSSVKASPGTVDFGWLGVLNGRKVAIVFEDPSIQARNTEIYRGSTRELTVYGTGFNN 336
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15089.3846.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LHL8_ECTSI5.830e-4169.91Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JNN1_9PHAE2.390e-741.46CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig15089contigEcto-sp13_S_contig15089:395..947 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig15089.3846.1mRNA_Ecto-sp13_S_contig15089.3846.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig15089 315..2674 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig15089.3846.1 ID=prot_Ecto-sp13_S_contig15089.3846.1|Name=mRNA_Ecto-sp13_S_contig15089.3846.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=113bp
MFIDGLYEGEIRSTFHTKVGEQPDKLTLELAEGFTSYNENLIYLPPPLEL
KSVDAGKGWAQLGYHGKPVAVAILFEDPSIDAPGTEIFHGFTTHLVVKGT
GFHNQGSIKRGD*
back to top