prot_Ecto-sp13_S_contig1507.3827.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1507.3827.1
Unique Nameprot_Ecto-sp13_S_contig1507.3827.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length310
Homology
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BLAST of mRNA_Ecto-sp13_S_contig1507.3827.1 vs. uniprot
Match: D7FMV0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMV0_ECTSI)

HSP 1 Score: 409 bits (1050), Expect = 4.870e-137
Identity = 297/316 (93.99%), Postives = 300/316 (94.94%), Query Frame = 0 
Query:    1 MTDDHVRRRGGGSGRLALSCTALRAKEGAEPSVSKALGLLCLLTASIVPSAGQQMDPAQMQRQIQQXXXXXXXXXXXXXXXNRIAQMLSAVGAGGASAARCAREHPRAAVAATAGAATALWVGKETRRSGVLVCSSPRISLFRPSDAYLSWVLESAAEAPVASPLRGVILSPLQDPQGEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXA------GGAAEIRAALGIMKSGAGQGTYMHETTHGKGVKSVCAGVRVGKGLGIYHKFSQGLGKLDVFDGRSDCELMAAESSSEDVVST 310
            MTDDHVRR GGGSGRLALSCTALRA EGA PSVSKALGLLCLL ASIVPS GQQMDPAQMQRQIQQXXXXXXXXXXXXXXXNRIAQMLSAVGAGGASAARCAREHPRAAVAATAGAATALWVGKETRRSG+LVCSSPRISLFRPSDAYLS VLE+AAEAPVASPLRGVILSPLQDPQGEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX       GGAAEIRA LGIMKSGAGQGTYMHE THGKGVKSVCAGVRVGKGLGIYHKF+QGLGKLDVFDGRSDCELMAAESSSEDV ST
Sbjct:    1 MTDDHVRRHGGGSGRLALSCTALRANEGAGPSVSKALGLLCLLAASIVPSVGQQMDPAQMQRQIQQXXXXXXXXXXXXXXXNRIAQMLSAVGAGGASAARCAREHPRAAVAATAGAATALWVGKETRRSGLLVCSSPRISLFRPSDAYLSRVLEAAAEAPVASPLRGVILSPLQDPQGEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGAAEIRATLGIMKSGAGQGTYMHEATHGKGVKSVCAGVRVGKGLGIYHKFAQGLGKLDVFDGRSDCELMAAESSSEDVGST 316
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BLAST of mRNA_Ecto-sp13_S_contig1507.3827.1 vs. uniprot
Match: A0A6H5KVX2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVX2_9PHAE)

HSP 1 Score: 269 bits (688), Expect = 1.540e-83
Identity = 165/180 (91.67%), Postives = 167/180 (92.78%), Query Frame = 0 
Query:    1 MTDDHVRRRGGGSGRLALSCTALRAKEGAEPSVSKALGLLCLLTASIVPSAGQQMDPAQMQRQIQQXXXXXXXXXXXXXXXNRIAQMLSAVGAGGASAARCAREHPRAAVAATAGAATALWVGKETRRSGVLVCSSPRISLFRPSDAYLSWVLESAAEAPVASPLRGVILSPLQDPQGEE 180
            MTD HV+RR GG GRLALSC  LRAK+GA P VSKALGLLCLL ASIVPSAGQQMDPAQMQRQIQQXXXXXXXXXXXXXXXNRI  MLSAVGAGGASAA  AR HPRAAVAATAGAATALWVGKETRRSGVLVCSSPRISLFRPSDAYLSWVLESAAEAPVASPLRGVILSPLQDPQGEE
Sbjct:    1 MTDVHVQRRCGGGGRLALSCAVLRAKDGAGPGVSKALGLLCLLAASIVPSAGQQMDPAQMQRQIQQXXXXXXXXXXXXXXXNRITHMLSAVGAGGASAAHYARAHPRAAVAATAGAATALWVGKETRRSGVLVCSSPRISLFRPSDAYLSWVLESAAEAPVASPLRGVILSPLQDPQGEE 180
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1507.3827.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FMV0_ECTSI4.870e-13793.99Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KVX2_9PHAE1.540e-8391.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1507contigEcto-sp13_S_contig1507:133..3923 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1507.3827.1mRNA_Ecto-sp13_S_contig1507.3827.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1507 133..3923 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1507.3827.1 ID=prot_Ecto-sp13_S_contig1507.3827.1|Name=mRNA_Ecto-sp13_S_contig1507.3827.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=310bp
MTDDHVRRRGGGSGRLALSCTALRAKEGAEPSVSKALGLLCLLTASIVPS
AGQQMDPAQMQRQIQQQMGGSPGGGGGAPPPNRIAQMLSAVGAGGASAAR
CAREHPRAAVAATAGAATALWVGKETRRSGVLVCSSPRISLFRPSDAYLS
WVLESAAEAPVASPLRGVILSPLQDPQGEEEQEEGQRDSSASSPSADGGS
RKRRSSGRRRVGCSSSSSNRLRDGEEEAGGAAEIRAALGIMKSGAGQGTY
MHETTHGKGVKSVCAGVRVGKGLGIYHKFSQGLGKLDVFDGRSDCELMAA
ESSSEDVVST
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