prot_Ecto-sp13_S_contig15047.3816.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig15047.3816.1
Unique Nameprot_Ecto-sp13_S_contig15047.3816.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length93
Homology
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BLAST of mRNA_Ecto-sp13_S_contig15047.3816.1 vs. uniprot
Match: D7FX31_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX31_ECTSI)

HSP 1 Score: 179 bits (454), Expect = 9.670e-55
Identity = 87/92 (94.57%), Postives = 90/92 (97.83%), Query Frame = 0 
Query:    2 WILRHVAMGYAAHVQRLLAALSWWAVPLVAPAKYTELSPEGALLRGDIFGGYFLVSIVLCVGLMEMWLRHTT-ASGTLRKERDQDKPAMKTA 92
            WILRHVAMGYAAHVQRLLAALSWWA+PLVAPAKYTELSPEGALLRGD+FGGYFLVSIVLCVGLMEMWLRHTT ASGTLR+ERDQDKPA KTA
Sbjct:  172 WILRHVAMGYAAHVQRLLAALSWWAIPLVAPAKYTELSPEGALLRGDVFGGYFLVSIVLCVGLMEMWLRHTTTASGTLREERDQDKPATKTA 263
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BLAST of mRNA_Ecto-sp13_S_contig15047.3816.1 vs. uniprot
Match: A0A6H5J9S6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9S6_9PHAE)

HSP 1 Score: 92.4 bits (228), Expect = 1.250e-20
Identity = 42/75 (56.00%), Postives = 54/75 (72.00%), Query Frame = 0 
Query:    2 WILRHVAMGYAAHVQRLLAALSWWAVPLVAPAKYTELSPEGALLRGDIFGGYFLVSIVLCVGLMEMWLRHTTASG 76
            W+LRHVAMGY+ H+QRLL  L+WW  PL+ P  YT+L+ +G  LR  +F  YF+  +VL VG ME+WLRHT  SG
Sbjct:  204 WMLRHVAMGYSVHMQRLLGHLTWWIFPLLMPG-YTDLTNDGMELRARVFALYFVAGVVLTVGPMEVWLRHTLPSG 277
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BLAST of mRNA_Ecto-sp13_S_contig15047.3816.1 vs. uniprot
Match: D7FX30_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX30_ECTSI)

HSP 1 Score: 90.5 bits (223), Expect = 1.280e-19
Identity = 41/75 (54.67%), Postives = 53/75 (70.67%), Query Frame = 0 
Query:    2 WILRHVAMGYAAHVQRLLAALSWWAVPLVAPAKYTELSPEGALLRGDIFGGYFLVSIVLCVGLMEMWLRHTTASG 76
            W+LRHVAMGY+ H+QRLL  L+WW  PL+ P  YT+ +  G  LR ++F  YF V + L VG ME+WLRHT+ SG
Sbjct:  202 WMLRHVAMGYSVHMQRLLGHLTWWMFPLLMPG-YTDFTNGGKELRANVFISYFFVGLALTVGPMEVWLRHTSPSG 275
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BLAST of mRNA_Ecto-sp13_S_contig15047.3816.1 vs. uniprot
Match: A0A6H5JEP7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEP7_9PHAE)

HSP 1 Score: 60.8 bits (146), Expect = 2.090e-10
Identity = 28/53 (52.83%), Postives = 38/53 (71.70%), Query Frame = 0 
Query:    3 ILRHVAMGYAAHVQRLLAALSWWAVPLVAPAKYTELSPEGALLRGDIFGGYFL 55
            +LRHVAMGY+ H+QRLL  L+WW  PL+ P  YT+L+ +G  LR ++F   FL
Sbjct:    1 MLRHVAMGYSVHMQRLLGHLTWWIFPLLMPG-YTDLTKDGKELRANVFISCFL 52
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15047.3816.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FX31_ECTSI9.670e-5594.57Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5J9S6_9PHAE1.250e-2056.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FX30_ECTSI1.280e-1954.67Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JEP7_9PHAE2.090e-1052.83Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..33
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..17
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 49..69
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 34..48
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 30..33
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 18..29
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 70..92
NoneNo IPR availableTMHMMTMhelixcoord: 49..71
NoneNo IPR availableTMHMMTMhelixcoord: 7..29

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig15047contigEcto-sp13_S_contig15047:1616..2465 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig15047.3816.1mRNA_Ecto-sp13_S_contig15047.3816.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig15047 762..2888 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig15047.3816.1 ID=prot_Ecto-sp13_S_contig15047.3816.1|Name=mRNA_Ecto-sp13_S_contig15047.3816.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=93bp
MWILRHVAMGYAAHVQRLLAALSWWAVPLVAPAKYTELSPEGALLRGDIF
GGYFLVSIVLCVGLMEMWLRHTTASGTLRKERDQDKPAMKTA*
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