prot_Ecto-sp13_S_contig15032.3804.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig15032.3804.1
Unique Nameprot_Ecto-sp13_S_contig15032.3804.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length236
Homology
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BLAST of mRNA_Ecto-sp13_S_contig15032.3804.1 vs. uniprot
Match: D7FHP9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHP9_ECTSI)

HSP 1 Score: 361 bits (926), Expect = 5.210e-123
Identity = 201/213 (94.37%), Postives = 209/213 (98.12%), Query Frame = 0 
Query:   24 MRKALSEIEVVDVFKVKIDDGTFFGGQDLVEWLCSRLKQELAFSAEVRKELEGERLASSREFDRLSENEKRLMNELREKRSELETAERRLLDTTDALHSQKQLRMKEMLVTQGAAKEISGLQSEVSRLTNRINLQADVTAAVEKECEALRSTVRTGREVRDVEDLNFRKTLADTIKREEGMVRLKRRLHAAETERRESEARVSRLQRETDRMR 236
            MRKALSEIEV+DVFKVKIDDGTFFGGQDLVEWLCSRLKQELAFSAEVRKEL+GERLASSREFDRLSENEKRL NELR+K+SELETAERRLLDTT+ALHSQKQLRMKEMLVTQGAAKEI+ LQSEVSRLTNRINLQADVTAAVEKECEALRSTVRTGREVRDVED+NFRKTLA+TIKREEGMVRLKRRLHAAE ERRESEARVSRLQRE DRMR
Sbjct:    1 MRKALSEIEVIDVFKVKIDDGTFFGGQDLVEWLCSRLKQELAFSAEVRKELQGERLASSREFDRLSENEKRLKNELRDKQSELETAERRLLDTTEALHSQKQLRMKEMLVTQGAAKEINSLQSEVSRLTNRINLQADVTAAVEKECEALRSTVRTGREVRDVEDVNFRKTLAETIKREEGMVRLKRRLHAAEAERRESEARVSRLQREMDRMR 213
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15032.3804.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FHP9_ECTSI5.210e-12394.37Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 204..231
NoneNo IPR availableCOILSCoilCoilcoord: 57..119

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig15032contigEcto-sp13_S_contig15032:1499..4271 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig15032.3804.1mRNA_Ecto-sp13_S_contig15032.3804.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig15032 1499..4271 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig15032.3804.1 ID=prot_Ecto-sp13_S_contig15032.3804.1|Name=mRNA_Ecto-sp13_S_contig15032.3804.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=236bp
GDTSAERVSVSTSSPLEADDTAGMRKALSEIEVVDVFKVKIDDGTFFGGQ
DLVEWLCSRLKQELAFSAEVRKELEGERLASSREFDRLSENEKRLMNELR
EKRSELETAERRLLDTTDALHSQKQLRMKEMLVTQGAAKEISGLQSEVSR
LTNRINLQADVTAAVEKECEALRSTVRTGREVRDVEDLNFRKTLADTIKR
EEGMVRLKRRLHAAETERRESEARVSRLQRETDRMR
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