mRNA_Ecto-sp13_S_contig14998.3782.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig14998.3782.1 vs. uniprot
Match: D7G781_ECTSI (PAP_fibrillin domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G781_ECTSI) HSP 1 Score: 451 bits (1160), Expect = 2.770e-158 Identity = 232/254 (91.34%), Postives = 237/254 (93.31%), Query Frame = 1
Query: 1 MWNAVWVLLLITYPPVLSFSFAGVALQGNKAGVRRAARRVLVETAASSAEAGPPPAIGGDGPANDGSAAAELVTSLLGKIEGTNRGVDCTPEQQKEIDGIIDQLNTLGADKDWLNDSRVFGNYNVAYVSSGPSQRGNPAGGRWRGRVGRSLFSRTEEMFQHLLEPATAVNMIVFRAFGLLTGCVTLRGDFKAIPDKPNFVKASFGPPLINFLGKHGLTIRSGPKSSVRLAATYVDERVSARLLGGXXXXGLFLF 762
MWNAVWVLLLITYPPVLSFSFAGVALQ NKA +RRAARRV VETAASSAEAGPPPAIGGDGPANDGSAAAELVTSLLGKIEGTNRGVDCTPEQQKEIDGIIDQLNTLGADKDWLNDSRVFGNYNVAYVSSGPSQRGNPAGGRWRGRVGRSLF RTEEMFQHL+EP TAVNM+VFRAFGLL GCVTLRGDFKAIPDKPNFVKASFGPPLINFLGK GLTIRSGPKSSVRLAATYVDER+ LG LF+F
Sbjct: 1 MWNAVWVLLLITYPPVLSFSFAGVALQSNKAAIRRAARRVSVETAASSAEAGPPPAIGGDGPANDGSAAAELVTSLLGKIEGTNRGVDCTPEQQKEIDGIIDQLNTLGADKDWLNDSRVFGNYNVAYVSSGPSQRGNPAGGRWRGRVGRSLF-RTEEMFQHLVEPTTAVNMVVFRAFGLLKGCVTLRGDFKAIPDKPNFVKASFGPPLINFLGKRGLTIRSGPKSSVRLAATYVDERIR---LGMGGRGSLFVF 250
BLAST of mRNA_Ecto-sp13_S_contig14998.3782.1 vs. uniprot
Match: A0A6H5JIG4_9PHAE (PAP_fibrillin domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIG4_9PHAE) HSP 1 Score: 445 bits (1144), Expect = 5.310e-157 Identity = 226/238 (94.96%), Postives = 230/238 (96.64%), Query Frame = 1
Query: 1 MWNAVWVLLLITYPPVLSFSFAGVALQGNKAGVRRAARRVLVETAASSAEAGPPPAIGGDGPANDGSAAAELVTSLLGKIEGTNRGVDCTPEQQKEIDGIIDQLNTLGADKDWLNDSRVFGNYNVAYVSSGPSQRGNPAGGRWRGRVGRSLFSR-TEEMFQHLLEPATAVNMIVFRAFGLLTGCVTLRGDFKAIPDKPNFVKASFGPPLINFLGKHGLTIRSGPKSSVRLAATYVDER 711
MWNAVW+LLL TYPPVLSFSFAGVALQ NKAGVRRAA RVLVETAASSAEAGPPP IGGD PANDGSAAAELVTSLLGKIEGTNRGVDCTPEQQKEIDGIIDQLNTLGADKDWLNDSRVFGNYNVAYVSSGPSQRGNPAGGRWRGRVGRSLF + TEEMFQHL+EPATAVNM+VFRAFGLL GCVTLRGDFKAIPDKPNFVKASFGPPLINFLGKHGLTIRSGPKSSVRLAATYVDER
Sbjct: 1 MWNAVWILLLTTYPPVLSFSFAGVALQSNKAGVRRAAPRVLVETAASSAEAGPPPPIGGDLPANDGSAAAELVTSLLGKIEGTNRGVDCTPEQQKEIDGIIDQLNTLGADKDWLNDSRVFGNYNVAYVSSGPSQRGNPAGGRWRGRVGRSLFRQATEEMFQHLVEPATAVNMVVFRAFGLLKGCVTLRGDFKAIPDKPNFVKASFGPPLINFLGKHGLTIRSGPKSSVRLAATYVDER 238
BLAST of mRNA_Ecto-sp13_S_contig14998.3782.1 vs. uniprot
Match: A0A7S2Y058_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y058_9STRA) HSP 1 Score: 157 bits (396), Expect = 4.150e-42 Identity = 81/188 (43.09%), Postives = 117/188 (62.23%), Query Frame = 1
Query: 211 ELVTSLLGKIEGTNRGVDCTPEQQKEIDGIIDQLNTLGADKDWLNDSRVFGNYNVAYVSSG--PSQRGNPAGGRWRGRVGRSLFSRTEEMFQHLLEPATAVNMIVFRAFGLLTGCVTLRGDFKAI--PDKPNFVKASFGPPLINFLGKHGLTIRSGPKSSVRLAATYVDERVSARLLGGXXXXGLFLF 762
+ + +L + T+RGV + EQ+ +IDG+++++ L + D L+D R+FGNYNVAYVS+G PSQ+GNPAGG +RG++GR F +T +FQHL+ P +NM+ F+ G GC TL G F+ I PD PN V+A F PP + T++ GP+S V L YVD++V +G LFLF
Sbjct: 114 QAIEEILKIVPETDRGVLASEEQRTKIDGLLEKVENLNTNADTLSDERIFGNYNVAYVSTGKAPSQKGNPAGGGFRGKIGRKFF-QTTAVFQHLVAPNQVINMVQFKMLGRFPGCTTLMGTFEKINVPDLPNAVRAKFQPPRVTIGSSGKFTLQIGPQSQVTLGTPYVDDKVR---VGRGGRGSLFLF 297
BLAST of mRNA_Ecto-sp13_S_contig14998.3782.1 vs. uniprot
Match: A0A7S3UXI2_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UXI2_HETAK) HSP 1 Score: 150 bits (379), Expect = 5.330e-41 Identity = 83/182 (45.60%), Postives = 108/182 (59.34%), Query Frame = 1
Query: 217 VTSLLGKIEGTNRGVDCTPEQQKEIDGIIDQLNTLGADKDWLNDSRVFGNYNVAYVSSGPSQRGNPAGGRWRGRVGRSLFSRTEEMFQHLLEPATAVNMIVFRAFGLLTGCVTLRGDFKAIPDKPNFVKASFGPPLINFLGKHGLTIRSGPKSSVRLAATYVDERVSARLLGGXXXXGLFLF 762
V LL I GT+ G P ++ EID +I+ L+ G + L ++GNYNVAYVSSG SQRGNPAGGR+RG +G++LF RT +FQHL+EP VNM+ F+ G++ GC TL G F PN V+A F PP + F T+ GP S V L+ Y+D RV LG LF+F
Sbjct: 71 VDQLLELIRGTDAGSAVAPGKRAEIDALIEALSAAGGGQRNLARPEIYGNYNVAYVSSGGSQRGNPAGGRFRGALGKALF-RTTNLFQHLVEPNRVVNMVQFKLLGVVEGCTTLAGTFAPEGRDPNTVRARFQPPRVTFGRSGRCTLELGPPSEVVLSTPYLDGRVR---LGRGGRGSLFVF 248
BLAST of mRNA_Ecto-sp13_S_contig14998.3782.1 vs. uniprot
Match: A0A383V4T8_TETOB (PAP_fibrillin domain-containing protein n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383V4T8_TETOB) HSP 1 Score: 147 bits (370), Expect = 1.880e-38 Identity = 86/201 (42.79%), Postives = 123/201 (61.19%), Query Frame = 1
Query: 196 GSAAAELVTSLLGKIEGTNRGVDCTPEQQKEIDGIIDQLNTLGADKDW--LNDSRVFGNYNVAYVSSGPSQRGNPAGGRWRGRVGRSLFSRTEEMFQHLLEPATAVNMIVFRAFGLLTGCVTLRGDF----------KAIPDKPNFVKASFGPPLINFLGKHGLTIRSGPKSSVRLAATYVDERVSARLLGGXXXXGLFLF 762
G AAA++V+++L K++GT+ G+ PEQ++E+D +I QL G + + + +FGNYNVAY SSG QRG PAGGR+RGR+GR LF +T +FQ +L+P A N + F+ FG+L G V LRG + + + V+ F PP+++ LG GL R GP SSV+L+ Y+DERV LG LF+F
Sbjct: 47 GPAAADIVSTILDKVQGTDGGISLQPEQKREVDALISQLEAAGRSQQPRPMQNPLLFGNYNVAYTSSGDDQRGQPAGGRFRGRLGRLLF-QTTGVFQSVLQPDIATNKVTFKLFGVLPGAVGLRGTVVPVQAGQPHGRGTAGEGDTVRVLFEPPVLS-LGS-GLHFRIGPPSSVQLSTPYLDERVR---LGRGSRGSLFVF 241
BLAST of mRNA_Ecto-sp13_S_contig14998.3782.1 vs. uniprot
Match: D8TNC6_VOLCA (PAP_fibrillin domain-containing protein (Fragment) n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8TNC6_VOLCA) HSP 1 Score: 137 bits (346), Expect = 7.270e-36 Identity = 89/213 (41.78%), Postives = 125/213 (58.69%), Query Frame = 1
Query: 133 AASSAEAGPPPAIGGDGPANDGSAAAELVTSLLGKIEGTNRGVDCTPEQQKEIDGIIDQLNTLGADKDW--LNDSRVFGNYNVAYVSSGPSQR-GNPAGGRWRGRVGRSLFSRTEEMFQHLLEPATAVNMIVFRAFGLLTGCVTLRGDFKAIPDKPNFVKASFGPPLINFLGKHGLTIRSGPKSSVRLAATYVDERVSARLLGGXXXXGLFLF 762
AASSA P PA P++ A +LV +L IEGT+ G+ +P+ + +D ++++L LGA + L++ ++GNYNVAY S G SQ G PAGGR+RGR+GR+LF RT +FQ +L+P A N + FR FG L G V LRG D + V+ F PP+++ + L ++ G SSV L TY+DERV LG LF+F
Sbjct: 59 AASSAAVSPAPAETVPQPSSSADEARQLVDQVLKTIEGTDSGLQISPQARAHVDALLERLEVLGAAQQPRPLDNPLLWGNYNVAYTSVGKSQEHGEPAGGRFRGRIGRALF-RTAGLFQSVLKPDLATNKVEFRLFGFLPGYVGLRGKVLPQGDTGDTVQVLFEPPMLSIANR--LHLKIGRFSSVVLTTTYLDERVR---LGRGSRGSLFVF 265
BLAST of mRNA_Ecto-sp13_S_contig14998.3782.1 vs. uniprot
Match: A0A250WT81_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250WT81_9CHLO) HSP 1 Score: 135 bits (340), Expect = 1.280e-34 Identity = 79/187 (42.25%), Postives = 112/187 (59.89%), Query Frame = 1
Query: 214 LVTSLLGKIEGTNRGVDCTPEQQKEIDGIIDQLNTLGADKDWLNDSRVFGNYNVAYVSS--GPSQRGNPAGGRWRGRVGRSLFSRTEEMFQHLL--EPATAVNMIVFRAFGLLTGCVTLRGDFKAIPDKPNFVKASFGPPLINFLGKHGLTIRSGPKSSVRLAATYVDERVSARLLGGXXXXGLFLF 762
LV ++ ++EGT+ G++ + Q+ EID ++D+L G + D R+ GNY V Y S+ P Q+G AGGR+RG +GRSLF +T +FQ +L +P AVN + F GL+ G V LRG + D V F PP+++F GK L +R GPKSSV+LA TY+DER+ +G LFLF
Sbjct: 47 LVDDIICRVEGTDGGINLSDAQKDEIDLLLDKLREAGKGSRPVKDPRLIGNYVVVYTSTRRAPGQKGQAAGGRFRGALGRSLF-KTTGVFQSVLAGDPPIAVNKVAFNLLGLIPGYVGLRGRVEPFGDDDESVSVYFDPPILSFAGK--LHLRIGPKSSVQLATTYLDERIR---VGLGSRGSLFLF 227
BLAST of mRNA_Ecto-sp13_S_contig14998.3782.1 vs. uniprot
Match: A0A8J4AX21_9CHLO (PAP_fibrillin domain-containing protein n=1 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4AX21_9CHLO) HSP 1 Score: 134 bits (336), Expect = 2.530e-33 Identity = 81/189 (42.86%), Postives = 114/189 (60.32%), Query Frame = 1
Query: 205 AAELVTSLLGKIEGTNRGVDCTPEQQKEIDGIIDQLNTLGADKDW--LNDSRVFGNYNVAYVSSGPSQ-RGNPAGGRWRGRVGRSLFSRTEEMFQHLLEPATAVNMIVFRAFGLLTGCVTLRGDFKAIPDKPNFVKASFGPPLINFLGKHGLTIRSGPKSSVRLAATYVDERVSARLLGGXXXXGLFLF 762
A +V +L IE T+ G+ +PE + +D ++D+L TLG + L++ ++GNYNVAY S G SQ RG PAGGR+RGR+GR+LF RT +FQ +L+P A N + FR FG L G V LRG D + V+ F PP+++ + L ++ G SSV L+ TY+DERV LG LF+F
Sbjct: 84 ARHIVDEVLEAIEATDSGLQISPEARTRVDSLLDRLETLGTTQQPRPLDNPLLWGNYNVAYTSVGRSQERGEPAGGRFRGRIGRALF-RTAGLFQSVLKPDIATNKVEFRLFGFLPGYVGLRGRVLPQGDNGDTVQVIFEPPVLSIA--NSLHLKIGKPSSVVLSTTYLDERVR---LGKGSRGSLFVF 266
BLAST of mRNA_Ecto-sp13_S_contig14998.3782.1 vs. uniprot
Match: A0A835XUG7_9CHLO (PAP_fibrillin domain-containing protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835XUG7_9CHLO) HSP 1 Score: 134 bits (337), Expect = 3.930e-33 Identity = 80/188 (42.55%), Postives = 116/188 (61.70%), Query Frame = 1
Query: 205 AAELVTSLLGKIEGTNRGVDCTPEQQKEIDGIIDQLNTLGADKDW--LNDSRVFGNYNVAYVSSGPSQRGNPAGGRWRGRVGRSLFSRTEEMFQHLLEPATAVNMIVFRAFGLLTGCVTLRGDFKAIPDKPNFVKASFGPPLINFLGKHGLTIRSGPKSSVRLAATYVDERVSARLLGGXXXXGLFLF 762
A +V +L I T+ G +PE++ E+D +++QL +GA + L++ ++GNYNVAY SSG Q G PAGGR+RGRVG++LF RT +FQ +L+P A N + F+ FG + G V LRG D+ + V+ F PP++ +G+ GL +R G SSV L+ TY+DERV LG LF+F
Sbjct: 58 ATAIVDRILESIRDTDSGAAISPEKRAEVDELLEQLEQIGAAQQPRPLDNPLLWGNYNVAYTSSGKGQYGEPAGGRFRGRVGKALF-RTAGLFQSVLQPDIATNKVEFKLFGFIPGFVGLRGKVLPEGDEGDTVQVLFEPPVLT-IGE-GLHLRIGRTSSVVLSTTYLDERVR---LGKGSRGSLFVF 239
BLAST of mRNA_Ecto-sp13_S_contig14998.3782.1 vs. uniprot
Match: A0A2K3D377_CHLRE (PAP_fibrillin domain-containing protein n=2 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A0A2K3D377_CHLRE) HSP 1 Score: 133 bits (334), Expect = 4.130e-33 Identity = 91/221 (41.18%), Postives = 128/221 (57.92%), Query Frame = 1
Query: 115 RVLVETAASSA--EAGPPPAIGGDGPANDGSAAAELVTSLLGKIEGTNRGVDCTPEQQKEIDGIIDQLNTLGADKDW--LNDSRVFGNYNVAYVSSGPSQ-RGNPAGGRWRGRVGRSLFSRTEEMFQHLLEPATAVNMIVFRAFGLLTGCVTLRGDFKAIPDKPNFVKASFGPPLINFLGKHGLTIRSGPKSSVRLAATYVDERVSARLLGGXXXXGLFLF 762
+V +E+ AS+A +A P A+ D A +V +L IEGT+ G+ P +K +DG++D+L LGA + L+ ++GNYNVAY S G SQ RG PAGGR+RG++GR+LF RT +FQ +L+P A N + F+ FG+L G V LRG D + V+ F PP++ K L I G SSV L+ TY+DER+ LG LF+F
Sbjct: 51 KVALESPASNAATDAAPAAAVAHAAAPED---ARAIVDEVLKAIEGTDSGLSIDPATRKHVDGLLDKLEALGAAQQPRPLDSPLLWGNYNVAYTSVGRSQERGEPAGGRFRGKIGRALF-RTAGLFQSVLQPDIATNKVEFKLFGMLPGFVGLRGRVVPQGDAGDTVQVLFEPPVLAIADKLFLCI--GRTSSVVLSTTYLDERIR---LGKGSRGSLFVF 262 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14998.3782.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig14998.3782.1 >prot_Ecto-sp13_S_contig14998.3782.1 ID=prot_Ecto-sp13_S_contig14998.3782.1|Name=mRNA_Ecto-sp13_S_contig14998.3782.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=254bp MWNAVWVLLLITYPPVLSFSFAGVALQGNKAGVRRAARRVLVETAASSAEback to top mRNA from alignment at Ecto-sp13_S_contig14998:622..4226+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig14998.3782.1 ID=mRNA_Ecto-sp13_S_contig14998.3782.1|Name=mRNA_Ecto-sp13_S_contig14998.3782.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3605bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14998:622..4226+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig14998:622..4226+ >mRNA_Ecto-sp13_S_contig14998.3782.1 ID=mRNA_Ecto-sp13_S_contig14998.3782.1|Name=mRNA_Ecto-sp13_S_contig14998.3782.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=762bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14998:622..4226+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |