prot_Ecto-sp13_S_contig14976.3768.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig14976.3768.1
Unique Nameprot_Ecto-sp13_S_contig14976.3768.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length174
Homology
BLAST of mRNA_Ecto-sp13_S_contig14976.3768.1 vs. uniprot
Match: D8LBZ5_ECTSI (Spindle pole body component n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBZ5_ECTSI)

HSP 1 Score: 307 bits (787), Expect = 8.090e-96
Identity = 165/176 (93.75%), Postives = 168/176 (95.45%), Query Frame = 0
Query:    1 GEGGVASALPEAMQEQLLLDDLLYAMMGFAGSYVVVKGVGGSGR--QGEAAAPPASLYDLEFAVNVDGDSIDQSLAYLAERVLPLCNNYVRVNRFASERGQHEFGKVAHALAAGVQRLLREYLVLVAQLESQFLQGKLSLQRLWFYVQPSMRTMESLEALTVELKDSKGGEMLRRL 174
            G GGVA ALPEAMQEQLLLDDLLYAMMGFAGSY+VVKGVGGSG   QGEAAAPPASLYDLEFAVNV GDSIDQSLAYLAERVLPLCNNYVRVNRFASER Q+EFGKVAHALAAGVQRLLREYLVLVAQLESQ LQGKLSLQRLWFYVQPSMRTMESLEALTVEL+DSKGGEMLRRL
Sbjct:  616 GGGGVAEALPEAMQEQLLLDDLLYAMMGFAGSYIVVKGVGGSGSGGQGEAAAPPASLYDLEFAVNV-GDSIDQSLAYLAERVLPLCNNYVRVNRFASERAQYEFGKVAHALAAGVQRLLREYLVLVAQLESQLLQGKLSLQRLWFYVQPSMRTMESLEALTVELRDSKGGEMLRRL 790          
BLAST of mRNA_Ecto-sp13_S_contig14976.3768.1 vs. uniprot
Match: A0A6H5K2G1_9PHAE (Spindle pole body component n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2G1_9PHAE)

HSP 1 Score: 247 bits (630), Expect = 1.100e-74
Identity = 127/133 (95.49%), Postives = 129/133 (96.99%), Query Frame = 0
Query:    1 GEGGVASALPEAMQEQLLLDDLLYAMMGFAGSYVVVKGVGGSGRQGEAAAPPASLYDLEFAVNVDGDSIDQSLAYLAERVLPLCNNYVRVNRFASERGQHEFGKVAHALAAGVQRLLREYLVLVAQLESQFLQ 133
            GEGGVA ALPEAMQEQLLLDDLLYAMMGFAGSY+VVKGVGGSG QGEA APP SLYDLEFAVNVDGDSIDQSLAYLAERVLPLCNNYVRVNRFASERGQ+EFGKVAHALAAGVQRLLREYLVLVAQLESQFLQ
Sbjct:  616 GEGGVAEALPEAMQEQLLLDDLLYAMMGFAGSYIVVKGVGGSGGQGEAVAPPTSLYDLEFAVNVDGDSIDQSLAYLAERVLPLCNNYVRVNRFASERGQYEFGKVAHALAAGVQRLLREYLVLVAQLESQFLQ 748          
BLAST of mRNA_Ecto-sp13_S_contig14976.3768.1 vs. uniprot
Match: A0A835ZJD2_9STRA (Spc98 family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZJD2_9STRA)

HSP 1 Score: 162 bits (409), Expect = 6.890e-43
Identity = 88/167 (52.69%), Postives = 117/167 (70.06%), Query Frame = 0
Query:   10 PEAMQEQLLLDDLLYAMMGFAGSYVVVKGVGGSGRQGEAAA--PPASLYDLEFAVNVDGDSIDQSLAYLAERVLPLCNNYVRVNRFASERGQHEFGKVAHALAAGVQRLLREYLVLVAQLESQFLQGKLSLQRLWFYVQPSMRTMESLEALTVELKDSKGGEMLRRL 174
            P ++QEQLLL+DLL A+MG  G Y+   G  G G  G   A   P +L ++EF V+V G   +Q   YLAER+LPLC+ YVRV+RF  +R + EFG VAHAL+A ++ LL+EYLVLVAQLE Q  +G LSLQRLWFY+QP++RTM  L+ +  E +  KGG+++ RL
Sbjct:  433 PVSLQEQLLLEDLLSALMGLEGRYIRATGRAGPGALGATGAVEAPKTLQEVEFTVDVGG--AEQGFGYLAERMLPLCSCYVRVSRFVLDRSRSEFGLVAHALSAAMRLLLKEYLVLVAQLEGQLRRGALSLQRLWFYLQPTLRTMGDLDKVCQESQGLKGGQLVNRL 597          
BLAST of mRNA_Ecto-sp13_S_contig14976.3768.1 vs. uniprot
Match: A0A8J1XID2_OWEFU (Gamma-tubulin complex component n=1 Tax=Owenia fusiformis TaxID=6347 RepID=A0A8J1XID2_OWEFU)

HSP 1 Score: 124 bits (312), Expect = 7.190e-30
Identity = 74/165 (44.85%), Postives = 103/165 (62.42%), Query Frame = 0
Query:    9 LPEAMQEQLLLDDLLYAMMGFAGSYVVVKGVGGSGRQGEAAAPPASLYDLEFAVNVDGDSIDQSLAYLAERVLPLCNNYVRVNRFASERGQHEFGKVAHALAAGVQRLLREYLVLVAQLESQFLQGKLSLQRLWFYVQPSMRTMESLEALTVELKDSK--GGEML 171
            LP A+QEQ +++DLLY + G  G YV  K +  S R GE            F +     S+D SL  L +RVLPLC NY  V RF  E+   E+G V HAL+A ++ L+++Y+VLVAQLE QF  G+L++Q+LWFY+QP+MRTME L A++  +   +  GG +L
Sbjct:  210 LPVAIQEQAIIEDLLYCLEGVDGKYVYAKPL--SDRYGERG----------FIIE---PSVDPSLGALVKRVLPLCANYSTVVRFIEEKSAFEYGLVNHALSAAMRTLIKDYMVLVAQLEHQFKLGQLTMQKLWFYIQPTMRTMEILAAVSYAVNKGQCIGGTIL 359          
BLAST of mRNA_Ecto-sp13_S_contig14976.3768.1 vs. uniprot
Match: UPI001B88B974 (gamma-tubulin complex component 2-like isoform X1 n=2 Tax=Gigantopelta aegis TaxID=1735272 RepID=UPI001B88B974)

HSP 1 Score: 123 bits (309), Expect = 1.840e-29
Identity = 71/168 (42.26%), Postives = 102/168 (60.71%), Query Frame = 0
Query:    9 LPEAMQEQLLLDDLLYAMMGFAGSYVVVKGVGGSGRQGEAAAPPASLYDLEFAVNVDGDSIDQSLAYLAERVLPLCNNYVRVNRFASERGQHEFGKVAHALAAGVQRLLREYLVLVAQLESQFLQGKLSLQRLWFYVQPSMRTMESLEALTVELKDSK--GGEMLRRL 174
            LP A+QE+ + DD+LY M G  G Y++ + +       E  AP   + D          S+D SL  L +RVLPLC+NY  V RF  E+   E+G V HAL A ++ L++EY+VLVAQLE +F  G L+LQ+LWFY+QP+MRT+E L +++  +   +  GG +L  L
Sbjct:  213 LPLALQERAIFDDILYCMQGIEGKYILARALT------ERYAPKEFMID---------QSLDPSLQELVKRVLPLCSNYSTVVRFIEEKAAFEYGLVNHALTAAMRTLIKEYMVLVAQLEHEFRVGDLTLQKLWFYLQPTMRTLEILASISNSINRGECIGGAVLSLL 365          
BLAST of mRNA_Ecto-sp13_S_contig14976.3768.1 vs. uniprot
Match: C3ZPX6_BRAFL (Gamma-tubulin complex component n=4 Tax=Branchiostoma TaxID=7737 RepID=C3ZPX6_BRAFL)

HSP 1 Score: 122 bits (305), Expect = 6.470e-29
Identity = 73/168 (43.45%), Postives = 103/168 (61.31%), Query Frame = 0
Query:    9 LPEAMQEQLLLDDLLYAMMGFAGSYVVVKGVGGSGRQGEAAAPPASLYDLEFAVNVDGDSIDQSLAYLAERVLPLCNNYVRVNRFASERGQHEFGKVAHALAAGVQRLLREYLVLVAQLESQFLQGKLSLQRLWFYVQPSMRTMESLEAL--TVELKDSKGGEMLRRL 174
            LP ++QEQ +++DLL+ MMG  G Y+  + V  + + G  +             NVD  S+D S+  L  RVLP+C++Y  V RF  E+   ++G+V HAL A ++ L +EYL+LVAQLE Q  QG+LSLQ+ WFYVQP  RT+E L A+  TV   D +GG +L  L
Sbjct:  206 LPMSLQEQAVVEDLLFTMMGVDGKYIQARAV--NDKHGHRS------------FNVD-PSLDVSMKELVNRVLPVCSHYSSVCRFMEEKSMPDYGQVNHALCAAMRNLAKEYLILVAQLEHQSRQGQLSLQKFWFYVQPCKRTLEILAAIAETVNKGDCRGGAVLSLL 358          
BLAST of mRNA_Ecto-sp13_S_contig14976.3768.1 vs. uniprot
Match: A7RR43_NEMVE (Gamma-tubulin complex component (Fragment) n=1 Tax=Nematostella vectensis TaxID=45351 RepID=A7RR43_NEMVE)

HSP 1 Score: 120 bits (302), Expect = 1.480e-28
Identity = 70/168 (41.67%), Postives = 100/168 (59.52%), Query Frame = 0
Query:    9 LPEAMQEQLLLDDLLYAMMGFAGSYVVVKGVGGSGRQGEAAAPPASLYDLEFAVNVDGDSIDQSLAYLAERVLPLCNNYVRVNRFASERGQHEFGKVAHALAAGVQRLLREYLVLVAQLESQFLQGKLSLQRLWFYVQPSMRTMESLEALTVELKDS--KGGEMLRRL 174
            LP  MQE  +++DLL+ MMG  G Y+ VK +       +   P   + D          ++D S+  +  R+LP+C++Y  + RF  E+   E+G V HAL A ++ LL+EYL+LVAQLE QF  G+LSLQ+LWFY+QP +RTME L A+ V +     KGG +L  L
Sbjct:   41 LPVVMQELAIVEDLLFLMMGVEGKYIRVKPLK------DKHGPRIFIVDK---------TLDVSMNEMVHRILPVCSHYSTICRFIEEKSSFEYGLVNHALCAAMRTLLKEYLILVAQLEHQFRMGQLSLQKLWFYIQPCIRTMEILSAIAVAVDKGGCKGGSVLTLL 193          
BLAST of mRNA_Ecto-sp13_S_contig14976.3768.1 vs. uniprot
Match: UPI00138FDB9E (gamma-tubulin complex component 2 n=1 Tax=Nematostella vectensis TaxID=45351 RepID=UPI00138FDB9E)

HSP 1 Score: 120 bits (302), Expect = 1.610e-28
Identity = 70/168 (41.67%), Postives = 100/168 (59.52%), Query Frame = 0
Query:    9 LPEAMQEQLLLDDLLYAMMGFAGSYVVVKGVGGSGRQGEAAAPPASLYDLEFAVNVDGDSIDQSLAYLAERVLPLCNNYVRVNRFASERGQHEFGKVAHALAAGVQRLLREYLVLVAQLESQFLQGKLSLQRLWFYVQPSMRTMESLEALTVELKDS--KGGEMLRRL 174
            LP  MQE  +++DLL+ MMG  G Y+ VK +       +   P   + D          ++D S+  +  R+LP+C++Y  + RF  E+   E+G V HAL A ++ LL+EYL+LVAQLE QF  G+LSLQ+LWFY+QP +RTME L A+ V +     KGG +L  L
Sbjct:  217 LPVVMQELAIVEDLLFLMMGVEGKYIRVKPLK------DKHGPRIFIVDK---------TLDVSMNEMVHRILPVCSHYSTICRFIEEKSSFEYGLVNHALCAAMRTLLKEYLILVAQLEHQFRMGQLSLQKLWFYIQPCIRTMEILSAIAVAVDKGGCKGGSVLTLL 369          
BLAST of mRNA_Ecto-sp13_S_contig14976.3768.1 vs. uniprot
Match: A0A7S1EKM6_HEMAN (Spindle pole body component (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1EKM6_HEMAN)

HSP 1 Score: 111 bits (278), Expect = 2.470e-28
Identity = 63/148 (42.57%), Postives = 91/148 (61.49%), Query Frame = 0
Query:   15 EQLLLDDLLYAMMGFAGSYVVVKGVGGSGRQGEAAAPPASLYDLEFAVNVDGDSIDQSLAYLAERVLPLCNNYVRVNRFASERGQHEFGKVAHALAAGVQRLLREYLVLVAQLESQFLQGKLSLQRLWFYVQPSMRTMESLEALTVEL 162
            E L+++DLL  ++G    Y+ +K               +   +++   +V   ++D SLA L  RVLPL  +YVRV RF   R  +E+G V HA  + +Q L+REYL+L+AQLE+QF  GKL+LQ+LWFYVQP+MRTM  L  L +E+
Sbjct:    1 ENLVIEDLLSVLIGIDAKYIRIKCT-------------SDRLNIQATSDV---TLDLSLADLVTRVLPLATSYVRVVRFIEMREHYEYGMVNHAFCSAMQELVREYLILIAQLETQFNAGKLTLQKLWFYVQPTMRTMRVLSDLVIEV 132          
BLAST of mRNA_Ecto-sp13_S_contig14976.3768.1 vs. uniprot
Match: A0A3M6TQJ9_POCDA (Gamma-tubulin complex component n=5 Tax=Pocilloporidae TaxID=46729 RepID=A0A3M6TQJ9_POCDA)

HSP 1 Score: 119 bits (299), Expect = 4.040e-28
Identity = 71/168 (42.26%), Postives = 101/168 (60.12%), Query Frame = 0
Query:    9 LPEAMQEQLLLDDLLYAMMGFAGSYVVVKGVGGSGRQGEAAAPPASLYDLEFAVNVDGDSIDQSLAYLAERVLPLCNNYVRVNRFASERGQHEFGKVAHALAAGVQRLLREYLVLVAQLESQFLQGKLSLQRLWFYVQPSMRTMESLEALTVELKDS--KGGEMLRRL 174
            LP  MQE  +++DLL+ MMG  G Y++VK             P    Y    +  +D  +++ +L  L +R+LP+C+NY  + RF   +   E G V HAL A ++ LL+EYL+LVAQLE QF  G+LSLQ+LWFY+QP MRTME L +++V +     KGG +L  L
Sbjct:  217 LPLPMQELAIVEDLLFLMMGVEGKYLLVK-------------PLKDKYSAR-SFTID-KTLEITLLELVQRILPVCSNYSTICRFMEAKSSFEHGLVNHALCAAMRTLLKEYLILVAQLEHQFRLGQLSLQKLWFYIQPCMRTMEILSSISVAIDKGSCKGGAVLTLL 369          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14976.3768.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LBZ5_ECTSI8.090e-9693.75Spindle pole body component n=1 Tax=Ectocarpus sil... [more]
A0A6H5K2G1_9PHAE1.100e-7495.49Spindle pole body component n=1 Tax=Ectocarpus sp.... [more]
A0A835ZJD2_9STRA6.890e-4352.69Spc98 family-domain-containing protein n=1 Tax=Tri... [more]
A0A8J1XID2_OWEFU7.190e-3044.85Gamma-tubulin complex component n=1 Tax=Owenia fus... [more]
UPI001B88B9741.840e-2942.26gamma-tubulin complex component 2-like isoform X1 ... [more]
C3ZPX6_BRAFL6.470e-2943.45Gamma-tubulin complex component n=4 Tax=Branchiost... [more]
A7RR43_NEMVE1.480e-2841.67Gamma-tubulin complex component (Fragment) n=1 Tax... [more]
UPI00138FDB9E1.610e-2841.67gamma-tubulin complex component 2 n=1 Tax=Nematost... [more]
A0A7S1EKM6_HEMAN2.470e-2842.57Spindle pole body component (Fragment) n=1 Tax=Hem... [more]
A0A3M6TQJ9_POCDA4.040e-2842.26Gamma-tubulin complex component n=5 Tax=Pocillopor... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR041470Gamma tubulin complex component protein, N-terminalPFAMPF17681GCP_N_terminalcoord: 19..172
e-value: 1.5E-29
score: 103.6
NoneNo IPR availablePANTHERPTHR19302:SF13GAMMA-TUBULIN COMPLEX COMPONENT 2coord: 9..169
IPR007259Gamma-tubulin complex component proteinPANTHERPTHR19302GAMMA TUBULIN COMPLEX PROTEINcoord: 9..169

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig14976contigEcto-sp13_S_contig14976:1255..2829 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig14976.3768.1mRNA_Ecto-sp13_S_contig14976.3768.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig14976 1255..2831 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig14976.3768.1 ID=prot_Ecto-sp13_S_contig14976.3768.1|Name=mRNA_Ecto-sp13_S_contig14976.3768.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=174bp
GEGGVASALPEAMQEQLLLDDLLYAMMGFAGSYVVVKGVGGSGRQGEAAA
PPASLYDLEFAVNVDGDSIDQSLAYLAERVLPLCNNYVRVNRFASERGQH
EFGKVAHALAAGVQRLLREYLVLVAQLESQFLQGKLSLQRLWFYVQPSMR
TMESLEALTVELKDSKGGEMLRRL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR041470GCP_N
IPR007259GCP