mRNA_Ecto-sp13_S_contig14976.3768.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig14976.3768.1 vs. uniprot
Match: D8LBZ5_ECTSI (Spindle pole body component n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBZ5_ECTSI) HSP 1 Score: 307 bits (787), Expect = 8.090e-96 Identity = 165/176 (93.75%), Postives = 168/176 (95.45%), Query Frame = 1
Query: 1 GEGGVASALPEAMQEQLLLDDLLYAMMGFAGSYVVVKGVGGSGR--QGEAAAPPASLYDLEFAVNVDGDSIDQSLAYLAERVLPLCNNYVRVNRFASERGQHEFGKVAHALAAGVQRLLREYLVLVAQLESQFLQGKLSLQRLWFYVQPSMRTMESLEALTVELKDSKGGEMLRRL 522
G GGVA ALPEAMQEQLLLDDLLYAMMGFAGSY+VVKGVGGSG QGEAAAPPASLYDLEFAVNV GDSIDQSLAYLAERVLPLCNNYVRVNRFASER Q+EFGKVAHALAAGVQRLLREYLVLVAQLESQ LQGKLSLQRLWFYVQPSMRTMESLEALTVEL+DSKGGEMLRRL
Sbjct: 616 GGGGVAEALPEAMQEQLLLDDLLYAMMGFAGSYIVVKGVGGSGSGGQGEAAAPPASLYDLEFAVNV-GDSIDQSLAYLAERVLPLCNNYVRVNRFASERAQYEFGKVAHALAAGVQRLLREYLVLVAQLESQLLQGKLSLQRLWFYVQPSMRTMESLEALTVELRDSKGGEMLRRL 790
BLAST of mRNA_Ecto-sp13_S_contig14976.3768.1 vs. uniprot
Match: A0A6H5K2G1_9PHAE (Spindle pole body component n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2G1_9PHAE) HSP 1 Score: 247 bits (630), Expect = 1.100e-74 Identity = 127/133 (95.49%), Postives = 129/133 (96.99%), Query Frame = 1
Query: 1 GEGGVASALPEAMQEQLLLDDLLYAMMGFAGSYVVVKGVGGSGRQGEAAAPPASLYDLEFAVNVDGDSIDQSLAYLAERVLPLCNNYVRVNRFASERGQHEFGKVAHALAAGVQRLLREYLVLVAQLESQFLQ 399
GEGGVA ALPEAMQEQLLLDDLLYAMMGFAGSY+VVKGVGGSG QGEA APP SLYDLEFAVNVDGDSIDQSLAYLAERVLPLCNNYVRVNRFASERGQ+EFGKVAHALAAGVQRLLREYLVLVAQLESQFLQ
Sbjct: 616 GEGGVAEALPEAMQEQLLLDDLLYAMMGFAGSYIVVKGVGGSGGQGEAVAPPTSLYDLEFAVNVDGDSIDQSLAYLAERVLPLCNNYVRVNRFASERGQYEFGKVAHALAAGVQRLLREYLVLVAQLESQFLQ 748
BLAST of mRNA_Ecto-sp13_S_contig14976.3768.1 vs. uniprot
Match: A0A835ZJD2_9STRA (Spc98 family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZJD2_9STRA) HSP 1 Score: 162 bits (409), Expect = 6.890e-43 Identity = 88/167 (52.69%), Postives = 117/167 (70.06%), Query Frame = 1
Query: 28 PEAMQEQLLLDDLLYAMMGFAGSYVVVKGVGGSGRQGEAAA--PPASLYDLEFAVNVDGDSIDQSLAYLAERVLPLCNNYVRVNRFASERGQHEFGKVAHALAAGVQRLLREYLVLVAQLESQFLQGKLSLQRLWFYVQPSMRTMESLEALTVELKDSKGGEMLRRL 522
P ++QEQLLL+DLL A+MG G Y+ G G G G A P +L ++EF V+V G +Q YLAER+LPLC+ YVRV+RF +R + EFG VAHAL+A ++ LL+EYLVLVAQLE Q +G LSLQRLWFY+QP++RTM L+ + E + KGG+++ RL
Sbjct: 433 PVSLQEQLLLEDLLSALMGLEGRYIRATGRAGPGALGATGAVEAPKTLQEVEFTVDVGG--AEQGFGYLAERMLPLCSCYVRVSRFVLDRSRSEFGLVAHALSAAMRLLLKEYLVLVAQLEGQLRRGALSLQRLWFYLQPTLRTMGDLDKVCQESQGLKGGQLVNRL 597
BLAST of mRNA_Ecto-sp13_S_contig14976.3768.1 vs. uniprot
Match: A0A8J1XID2_OWEFU (Gamma-tubulin complex component n=1 Tax=Owenia fusiformis TaxID=6347 RepID=A0A8J1XID2_OWEFU) HSP 1 Score: 124 bits (312), Expect = 7.190e-30 Identity = 74/165 (44.85%), Postives = 103/165 (62.42%), Query Frame = 1
Query: 25 LPEAMQEQLLLDDLLYAMMGFAGSYVVVKGVGGSGRQGEAAAPPASLYDLEFAVNVDGDSIDQSLAYLAERVLPLCNNYVRVNRFASERGQHEFGKVAHALAAGVQRLLREYLVLVAQLESQFLQGKLSLQRLWFYVQPSMRTMESLEALTVELKDSK--GGEML 513
LP A+QEQ +++DLLY + G G YV K + S R GE F + S+D SL L +RVLPLC NY V RF E+ E+G V HAL+A ++ L+++Y+VLVAQLE QF G+L++Q+LWFY+QP+MRTME L A++ + + GG +L
Sbjct: 210 LPVAIQEQAIIEDLLYCLEGVDGKYVYAKPL--SDRYGERG----------FIIE---PSVDPSLGALVKRVLPLCANYSTVVRFIEEKSAFEYGLVNHALSAAMRTLIKDYMVLVAQLEHQFKLGQLTMQKLWFYIQPTMRTMEILAAVSYAVNKGQCIGGTIL 359
BLAST of mRNA_Ecto-sp13_S_contig14976.3768.1 vs. uniprot
Match: UPI001B88B974 (gamma-tubulin complex component 2-like isoform X1 n=2 Tax=Gigantopelta aegis TaxID=1735272 RepID=UPI001B88B974) HSP 1 Score: 123 bits (309), Expect = 1.840e-29 Identity = 71/168 (42.26%), Postives = 102/168 (60.71%), Query Frame = 1
Query: 25 LPEAMQEQLLLDDLLYAMMGFAGSYVVVKGVGGSGRQGEAAAPPASLYDLEFAVNVDGDSIDQSLAYLAERVLPLCNNYVRVNRFASERGQHEFGKVAHALAAGVQRLLREYLVLVAQLESQFLQGKLSLQRLWFYVQPSMRTMESLEALTVELKDSK--GGEMLRRL 522
LP A+QE+ + DD+LY M G G Y++ + + E AP + D S+D SL L +RVLPLC+NY V RF E+ E+G V HAL A ++ L++EY+VLVAQLE +F G L+LQ+LWFY+QP+MRT+E L +++ + + GG +L L
Sbjct: 213 LPLALQERAIFDDILYCMQGIEGKYILARALT------ERYAPKEFMID---------QSLDPSLQELVKRVLPLCSNYSTVVRFIEEKAAFEYGLVNHALTAAMRTLIKEYMVLVAQLEHEFRVGDLTLQKLWFYLQPTMRTLEILASISNSINRGECIGGAVLSLL 365
BLAST of mRNA_Ecto-sp13_S_contig14976.3768.1 vs. uniprot
Match: C3ZPX6_BRAFL (Gamma-tubulin complex component n=4 Tax=Branchiostoma TaxID=7737 RepID=C3ZPX6_BRAFL) HSP 1 Score: 122 bits (305), Expect = 6.470e-29 Identity = 73/168 (43.45%), Postives = 103/168 (61.31%), Query Frame = 1
Query: 25 LPEAMQEQLLLDDLLYAMMGFAGSYVVVKGVGGSGRQGEAAAPPASLYDLEFAVNVDGDSIDQSLAYLAERVLPLCNNYVRVNRFASERGQHEFGKVAHALAAGVQRLLREYLVLVAQLESQFLQGKLSLQRLWFYVQPSMRTMESLEAL--TVELKDSKGGEMLRRL 522
LP ++QEQ +++DLL+ MMG G Y+ + V + + G + NVD S+D S+ L RVLP+C++Y V RF E+ ++G+V HAL A ++ L +EYL+LVAQLE Q QG+LSLQ+ WFYVQP RT+E L A+ TV D +GG +L L
Sbjct: 206 LPMSLQEQAVVEDLLFTMMGVDGKYIQARAV--NDKHGHRS------------FNVD-PSLDVSMKELVNRVLPVCSHYSSVCRFMEEKSMPDYGQVNHALCAAMRNLAKEYLILVAQLEHQSRQGQLSLQKFWFYVQPCKRTLEILAAIAETVNKGDCRGGAVLSLL 358
BLAST of mRNA_Ecto-sp13_S_contig14976.3768.1 vs. uniprot
Match: A7RR43_NEMVE (Gamma-tubulin complex component (Fragment) n=1 Tax=Nematostella vectensis TaxID=45351 RepID=A7RR43_NEMVE) HSP 1 Score: 120 bits (302), Expect = 1.480e-28 Identity = 70/168 (41.67%), Postives = 100/168 (59.52%), Query Frame = 1
Query: 25 LPEAMQEQLLLDDLLYAMMGFAGSYVVVKGVGGSGRQGEAAAPPASLYDLEFAVNVDGDSIDQSLAYLAERVLPLCNNYVRVNRFASERGQHEFGKVAHALAAGVQRLLREYLVLVAQLESQFLQGKLSLQRLWFYVQPSMRTMESLEALTVELKDS--KGGEMLRRL 522
LP MQE +++DLL+ MMG G Y+ VK + + P + D ++D S+ + R+LP+C++Y + RF E+ E+G V HAL A ++ LL+EYL+LVAQLE QF G+LSLQ+LWFY+QP +RTME L A+ V + KGG +L L
Sbjct: 41 LPVVMQELAIVEDLLFLMMGVEGKYIRVKPLK------DKHGPRIFIVDK---------TLDVSMNEMVHRILPVCSHYSTICRFIEEKSSFEYGLVNHALCAAMRTLLKEYLILVAQLEHQFRMGQLSLQKLWFYIQPCIRTMEILSAIAVAVDKGGCKGGSVLTLL 193
BLAST of mRNA_Ecto-sp13_S_contig14976.3768.1 vs. uniprot
Match: UPI00138FDB9E (gamma-tubulin complex component 2 n=1 Tax=Nematostella vectensis TaxID=45351 RepID=UPI00138FDB9E) HSP 1 Score: 120 bits (302), Expect = 1.610e-28 Identity = 70/168 (41.67%), Postives = 100/168 (59.52%), Query Frame = 1
Query: 25 LPEAMQEQLLLDDLLYAMMGFAGSYVVVKGVGGSGRQGEAAAPPASLYDLEFAVNVDGDSIDQSLAYLAERVLPLCNNYVRVNRFASERGQHEFGKVAHALAAGVQRLLREYLVLVAQLESQFLQGKLSLQRLWFYVQPSMRTMESLEALTVELKDS--KGGEMLRRL 522
LP MQE +++DLL+ MMG G Y+ VK + + P + D ++D S+ + R+LP+C++Y + RF E+ E+G V HAL A ++ LL+EYL+LVAQLE QF G+LSLQ+LWFY+QP +RTME L A+ V + KGG +L L
Sbjct: 217 LPVVMQELAIVEDLLFLMMGVEGKYIRVKPLK------DKHGPRIFIVDK---------TLDVSMNEMVHRILPVCSHYSTICRFIEEKSSFEYGLVNHALCAAMRTLLKEYLILVAQLEHQFRMGQLSLQKLWFYIQPCIRTMEILSAIAVAVDKGGCKGGSVLTLL 369
BLAST of mRNA_Ecto-sp13_S_contig14976.3768.1 vs. uniprot
Match: A0A7S1EKM6_HEMAN (Spindle pole body component (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1EKM6_HEMAN) HSP 1 Score: 111 bits (278), Expect = 2.470e-28 Identity = 63/148 (42.57%), Postives = 91/148 (61.49%), Query Frame = 1
Query: 43 EQLLLDDLLYAMMGFAGSYVVVKGVGGSGRQGEAAAPPASLYDLEFAVNVDGDSIDQSLAYLAERVLPLCNNYVRVNRFASERGQHEFGKVAHALAAGVQRLLREYLVLVAQLESQFLQGKLSLQRLWFYVQPSMRTMESLEALTVEL 486
E L+++DLL ++G Y+ +K + +++ +V ++D SLA L RVLPL +YVRV RF R +E+G V HA + +Q L+REYL+L+AQLE+QF GKL+LQ+LWFYVQP+MRTM L L +E+
Sbjct: 1 ENLVIEDLLSVLIGIDAKYIRIKCT-------------SDRLNIQATSDV---TLDLSLADLVTRVLPLATSYVRVVRFIEMREHYEYGMVNHAFCSAMQELVREYLILIAQLETQFNAGKLTLQKLWFYVQPTMRTMRVLSDLVIEV 132
BLAST of mRNA_Ecto-sp13_S_contig14976.3768.1 vs. uniprot
Match: A0A3M6TQJ9_POCDA (Gamma-tubulin complex component n=5 Tax=Pocilloporidae TaxID=46729 RepID=A0A3M6TQJ9_POCDA) HSP 1 Score: 119 bits (299), Expect = 4.040e-28 Identity = 71/168 (42.26%), Postives = 101/168 (60.12%), Query Frame = 1
Query: 25 LPEAMQEQLLLDDLLYAMMGFAGSYVVVKGVGGSGRQGEAAAPPASLYDLEFAVNVDGDSIDQSLAYLAERVLPLCNNYVRVNRFASERGQHEFGKVAHALAAGVQRLLREYLVLVAQLESQFLQGKLSLQRLWFYVQPSMRTMESLEALTVELKDS--KGGEMLRRL 522
LP MQE +++DLL+ MMG G Y++VK P Y + +D +++ +L L +R+LP+C+NY + RF + E G V HAL A ++ LL+EYL+LVAQLE QF G+LSLQ+LWFY+QP MRTME L +++V + KGG +L L
Sbjct: 217 LPLPMQELAIVEDLLFLMMGVEGKYLLVK-------------PLKDKYSAR-SFTID-KTLEITLLELVQRILPVCSNYSTICRFMEAKSSFEHGLVNHALCAAMRTLLKEYLILVAQLEHQFRLGQLSLQKLWFYIQPCMRTMEILSSISVAIDKGSCKGGAVLTLL 369 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14976.3768.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig14976.3768.1 >prot_Ecto-sp13_S_contig14976.3768.1 ID=prot_Ecto-sp13_S_contig14976.3768.1|Name=mRNA_Ecto-sp13_S_contig14976.3768.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=174bp GEGGVASALPEAMQEQLLLDDLLYAMMGFAGSYVVVKGVGGSGRQGEAAAback to top mRNA from alignment at Ecto-sp13_S_contig14976:1255..2831+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig14976.3768.1 ID=mRNA_Ecto-sp13_S_contig14976.3768.1|Name=mRNA_Ecto-sp13_S_contig14976.3768.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1577bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14976:1255..2831+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig14976:1255..2831+ >mRNA_Ecto-sp13_S_contig14976.3768.1 ID=mRNA_Ecto-sp13_S_contig14976.3768.1|Name=mRNA_Ecto-sp13_S_contig14976.3768.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=522bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14976:1255..2831+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |