mRNA_Ecto-sp13_S_contig14976.3768.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig14976.3768.1
Unique NamemRNA_Ecto-sp13_S_contig14976.3768.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig14976.3768.1 vs. uniprot
Match: D8LBZ5_ECTSI (Spindle pole body component n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBZ5_ECTSI)

HSP 1 Score: 307 bits (787), Expect = 8.090e-96
Identity = 165/176 (93.75%), Postives = 168/176 (95.45%), Query Frame = 1
Query:    1 GEGGVASALPEAMQEQLLLDDLLYAMMGFAGSYVVVKGVGGSGR--QGEAAAPPASLYDLEFAVNVDGDSIDQSLAYLAERVLPLCNNYVRVNRFASERGQHEFGKVAHALAAGVQRLLREYLVLVAQLESQFLQGKLSLQRLWFYVQPSMRTMESLEALTVELKDSKGGEMLRRL 522
            G GGVA ALPEAMQEQLLLDDLLYAMMGFAGSY+VVKGVGGSG   QGEAAAPPASLYDLEFAVNV GDSIDQSLAYLAERVLPLCNNYVRVNRFASER Q+EFGKVAHALAAGVQRLLREYLVLVAQLESQ LQGKLSLQRLWFYVQPSMRTMESLEALTVEL+DSKGGEMLRRL
Sbjct:  616 GGGGVAEALPEAMQEQLLLDDLLYAMMGFAGSYIVVKGVGGSGSGGQGEAAAPPASLYDLEFAVNV-GDSIDQSLAYLAERVLPLCNNYVRVNRFASERAQYEFGKVAHALAAGVQRLLREYLVLVAQLESQLLQGKLSLQRLWFYVQPSMRTMESLEALTVELRDSKGGEMLRRL 790          
BLAST of mRNA_Ecto-sp13_S_contig14976.3768.1 vs. uniprot
Match: A0A6H5K2G1_9PHAE (Spindle pole body component n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2G1_9PHAE)

HSP 1 Score: 247 bits (630), Expect = 1.100e-74
Identity = 127/133 (95.49%), Postives = 129/133 (96.99%), Query Frame = 1
Query:    1 GEGGVASALPEAMQEQLLLDDLLYAMMGFAGSYVVVKGVGGSGRQGEAAAPPASLYDLEFAVNVDGDSIDQSLAYLAERVLPLCNNYVRVNRFASERGQHEFGKVAHALAAGVQRLLREYLVLVAQLESQFLQ 399
            GEGGVA ALPEAMQEQLLLDDLLYAMMGFAGSY+VVKGVGGSG QGEA APP SLYDLEFAVNVDGDSIDQSLAYLAERVLPLCNNYVRVNRFASERGQ+EFGKVAHALAAGVQRLLREYLVLVAQLESQFLQ
Sbjct:  616 GEGGVAEALPEAMQEQLLLDDLLYAMMGFAGSYIVVKGVGGSGGQGEAVAPPTSLYDLEFAVNVDGDSIDQSLAYLAERVLPLCNNYVRVNRFASERGQYEFGKVAHALAAGVQRLLREYLVLVAQLESQFLQ 748          
BLAST of mRNA_Ecto-sp13_S_contig14976.3768.1 vs. uniprot
Match: A0A835ZJD2_9STRA (Spc98 family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZJD2_9STRA)

HSP 1 Score: 162 bits (409), Expect = 6.890e-43
Identity = 88/167 (52.69%), Postives = 117/167 (70.06%), Query Frame = 1
Query:   28 PEAMQEQLLLDDLLYAMMGFAGSYVVVKGVGGSGRQGEAAA--PPASLYDLEFAVNVDGDSIDQSLAYLAERVLPLCNNYVRVNRFASERGQHEFGKVAHALAAGVQRLLREYLVLVAQLESQFLQGKLSLQRLWFYVQPSMRTMESLEALTVELKDSKGGEMLRRL 522
            P ++QEQLLL+DLL A+MG  G Y+   G  G G  G   A   P +L ++EF V+V G   +Q   YLAER+LPLC+ YVRV+RF  +R + EFG VAHAL+A ++ LL+EYLVLVAQLE Q  +G LSLQRLWFY+QP++RTM  L+ +  E +  KGG+++ RL
Sbjct:  433 PVSLQEQLLLEDLLSALMGLEGRYIRATGRAGPGALGATGAVEAPKTLQEVEFTVDVGG--AEQGFGYLAERMLPLCSCYVRVSRFVLDRSRSEFGLVAHALSAAMRLLLKEYLVLVAQLEGQLRRGALSLQRLWFYLQPTLRTMGDLDKVCQESQGLKGGQLVNRL 597          
BLAST of mRNA_Ecto-sp13_S_contig14976.3768.1 vs. uniprot
Match: A0A8J1XID2_OWEFU (Gamma-tubulin complex component n=1 Tax=Owenia fusiformis TaxID=6347 RepID=A0A8J1XID2_OWEFU)

HSP 1 Score: 124 bits (312), Expect = 7.190e-30
Identity = 74/165 (44.85%), Postives = 103/165 (62.42%), Query Frame = 1
Query:   25 LPEAMQEQLLLDDLLYAMMGFAGSYVVVKGVGGSGRQGEAAAPPASLYDLEFAVNVDGDSIDQSLAYLAERVLPLCNNYVRVNRFASERGQHEFGKVAHALAAGVQRLLREYLVLVAQLESQFLQGKLSLQRLWFYVQPSMRTMESLEALTVELKDSK--GGEML 513
            LP A+QEQ +++DLLY + G  G YV  K +  S R GE            F +     S+D SL  L +RVLPLC NY  V RF  E+   E+G V HAL+A ++ L+++Y+VLVAQLE QF  G+L++Q+LWFY+QP+MRTME L A++  +   +  GG +L
Sbjct:  210 LPVAIQEQAIIEDLLYCLEGVDGKYVYAKPL--SDRYGERG----------FIIE---PSVDPSLGALVKRVLPLCANYSTVVRFIEEKSAFEYGLVNHALSAAMRTLIKDYMVLVAQLEHQFKLGQLTMQKLWFYIQPTMRTMEILAAVSYAVNKGQCIGGTIL 359          
BLAST of mRNA_Ecto-sp13_S_contig14976.3768.1 vs. uniprot
Match: UPI001B88B974 (gamma-tubulin complex component 2-like isoform X1 n=2 Tax=Gigantopelta aegis TaxID=1735272 RepID=UPI001B88B974)

HSP 1 Score: 123 bits (309), Expect = 1.840e-29
Identity = 71/168 (42.26%), Postives = 102/168 (60.71%), Query Frame = 1
Query:   25 LPEAMQEQLLLDDLLYAMMGFAGSYVVVKGVGGSGRQGEAAAPPASLYDLEFAVNVDGDSIDQSLAYLAERVLPLCNNYVRVNRFASERGQHEFGKVAHALAAGVQRLLREYLVLVAQLESQFLQGKLSLQRLWFYVQPSMRTMESLEALTVELKDSK--GGEMLRRL 522
            LP A+QE+ + DD+LY M G  G Y++ + +       E  AP   + D          S+D SL  L +RVLPLC+NY  V RF  E+   E+G V HAL A ++ L++EY+VLVAQLE +F  G L+LQ+LWFY+QP+MRT+E L +++  +   +  GG +L  L
Sbjct:  213 LPLALQERAIFDDILYCMQGIEGKYILARALT------ERYAPKEFMID---------QSLDPSLQELVKRVLPLCSNYSTVVRFIEEKAAFEYGLVNHALTAAMRTLIKEYMVLVAQLEHEFRVGDLTLQKLWFYLQPTMRTLEILASISNSINRGECIGGAVLSLL 365          
BLAST of mRNA_Ecto-sp13_S_contig14976.3768.1 vs. uniprot
Match: C3ZPX6_BRAFL (Gamma-tubulin complex component n=4 Tax=Branchiostoma TaxID=7737 RepID=C3ZPX6_BRAFL)

HSP 1 Score: 122 bits (305), Expect = 6.470e-29
Identity = 73/168 (43.45%), Postives = 103/168 (61.31%), Query Frame = 1
Query:   25 LPEAMQEQLLLDDLLYAMMGFAGSYVVVKGVGGSGRQGEAAAPPASLYDLEFAVNVDGDSIDQSLAYLAERVLPLCNNYVRVNRFASERGQHEFGKVAHALAAGVQRLLREYLVLVAQLESQFLQGKLSLQRLWFYVQPSMRTMESLEAL--TVELKDSKGGEMLRRL 522
            LP ++QEQ +++DLL+ MMG  G Y+  + V  + + G  +             NVD  S+D S+  L  RVLP+C++Y  V RF  E+   ++G+V HAL A ++ L +EYL+LVAQLE Q  QG+LSLQ+ WFYVQP  RT+E L A+  TV   D +GG +L  L
Sbjct:  206 LPMSLQEQAVVEDLLFTMMGVDGKYIQARAV--NDKHGHRS------------FNVD-PSLDVSMKELVNRVLPVCSHYSSVCRFMEEKSMPDYGQVNHALCAAMRNLAKEYLILVAQLEHQSRQGQLSLQKFWFYVQPCKRTLEILAAIAETVNKGDCRGGAVLSLL 358          
BLAST of mRNA_Ecto-sp13_S_contig14976.3768.1 vs. uniprot
Match: A7RR43_NEMVE (Gamma-tubulin complex component (Fragment) n=1 Tax=Nematostella vectensis TaxID=45351 RepID=A7RR43_NEMVE)

HSP 1 Score: 120 bits (302), Expect = 1.480e-28
Identity = 70/168 (41.67%), Postives = 100/168 (59.52%), Query Frame = 1
Query:   25 LPEAMQEQLLLDDLLYAMMGFAGSYVVVKGVGGSGRQGEAAAPPASLYDLEFAVNVDGDSIDQSLAYLAERVLPLCNNYVRVNRFASERGQHEFGKVAHALAAGVQRLLREYLVLVAQLESQFLQGKLSLQRLWFYVQPSMRTMESLEALTVELKDS--KGGEMLRRL 522
            LP  MQE  +++DLL+ MMG  G Y+ VK +       +   P   + D          ++D S+  +  R+LP+C++Y  + RF  E+   E+G V HAL A ++ LL+EYL+LVAQLE QF  G+LSLQ+LWFY+QP +RTME L A+ V +     KGG +L  L
Sbjct:   41 LPVVMQELAIVEDLLFLMMGVEGKYIRVKPLK------DKHGPRIFIVDK---------TLDVSMNEMVHRILPVCSHYSTICRFIEEKSSFEYGLVNHALCAAMRTLLKEYLILVAQLEHQFRMGQLSLQKLWFYIQPCIRTMEILSAIAVAVDKGGCKGGSVLTLL 193          
BLAST of mRNA_Ecto-sp13_S_contig14976.3768.1 vs. uniprot
Match: UPI00138FDB9E (gamma-tubulin complex component 2 n=1 Tax=Nematostella vectensis TaxID=45351 RepID=UPI00138FDB9E)

HSP 1 Score: 120 bits (302), Expect = 1.610e-28
Identity = 70/168 (41.67%), Postives = 100/168 (59.52%), Query Frame = 1
Query:   25 LPEAMQEQLLLDDLLYAMMGFAGSYVVVKGVGGSGRQGEAAAPPASLYDLEFAVNVDGDSIDQSLAYLAERVLPLCNNYVRVNRFASERGQHEFGKVAHALAAGVQRLLREYLVLVAQLESQFLQGKLSLQRLWFYVQPSMRTMESLEALTVELKDS--KGGEMLRRL 522
            LP  MQE  +++DLL+ MMG  G Y+ VK +       +   P   + D          ++D S+  +  R+LP+C++Y  + RF  E+   E+G V HAL A ++ LL+EYL+LVAQLE QF  G+LSLQ+LWFY+QP +RTME L A+ V +     KGG +L  L
Sbjct:  217 LPVVMQELAIVEDLLFLMMGVEGKYIRVKPLK------DKHGPRIFIVDK---------TLDVSMNEMVHRILPVCSHYSTICRFIEEKSSFEYGLVNHALCAAMRTLLKEYLILVAQLEHQFRMGQLSLQKLWFYIQPCIRTMEILSAIAVAVDKGGCKGGSVLTLL 369          
BLAST of mRNA_Ecto-sp13_S_contig14976.3768.1 vs. uniprot
Match: A0A7S1EKM6_HEMAN (Spindle pole body component (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1EKM6_HEMAN)

HSP 1 Score: 111 bits (278), Expect = 2.470e-28
Identity = 63/148 (42.57%), Postives = 91/148 (61.49%), Query Frame = 1
Query:   43 EQLLLDDLLYAMMGFAGSYVVVKGVGGSGRQGEAAAPPASLYDLEFAVNVDGDSIDQSLAYLAERVLPLCNNYVRVNRFASERGQHEFGKVAHALAAGVQRLLREYLVLVAQLESQFLQGKLSLQRLWFYVQPSMRTMESLEALTVEL 486
            E L+++DLL  ++G    Y+ +K               +   +++   +V   ++D SLA L  RVLPL  +YVRV RF   R  +E+G V HA  + +Q L+REYL+L+AQLE+QF  GKL+LQ+LWFYVQP+MRTM  L  L +E+
Sbjct:    1 ENLVIEDLLSVLIGIDAKYIRIKCT-------------SDRLNIQATSDV---TLDLSLADLVTRVLPLATSYVRVVRFIEMREHYEYGMVNHAFCSAMQELVREYLILIAQLETQFNAGKLTLQKLWFYVQPTMRTMRVLSDLVIEV 132          
BLAST of mRNA_Ecto-sp13_S_contig14976.3768.1 vs. uniprot
Match: A0A3M6TQJ9_POCDA (Gamma-tubulin complex component n=5 Tax=Pocilloporidae TaxID=46729 RepID=A0A3M6TQJ9_POCDA)

HSP 1 Score: 119 bits (299), Expect = 4.040e-28
Identity = 71/168 (42.26%), Postives = 101/168 (60.12%), Query Frame = 1
Query:   25 LPEAMQEQLLLDDLLYAMMGFAGSYVVVKGVGGSGRQGEAAAPPASLYDLEFAVNVDGDSIDQSLAYLAERVLPLCNNYVRVNRFASERGQHEFGKVAHALAAGVQRLLREYLVLVAQLESQFLQGKLSLQRLWFYVQPSMRTMESLEALTVELKDS--KGGEMLRRL 522
            LP  MQE  +++DLL+ MMG  G Y++VK             P    Y    +  +D  +++ +L  L +R+LP+C+NY  + RF   +   E G V HAL A ++ LL+EYL+LVAQLE QF  G+LSLQ+LWFY+QP MRTME L +++V +     KGG +L  L
Sbjct:  217 LPLPMQELAIVEDLLFLMMGVEGKYLLVK-------------PLKDKYSAR-SFTID-KTLEITLLELVQRILPVCSNYSTICRFMEAKSSFEHGLVNHALCAAMRTLLKEYLILVAQLEHQFRLGQLSLQKLWFYIQPCMRTMEILSSISVAIDKGSCKGGAVLTLL 369          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14976.3768.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LBZ5_ECTSI8.090e-9693.75Spindle pole body component n=1 Tax=Ectocarpus sil... [more]
A0A6H5K2G1_9PHAE1.100e-7495.49Spindle pole body component n=1 Tax=Ectocarpus sp.... [more]
A0A835ZJD2_9STRA6.890e-4352.69Spc98 family-domain-containing protein n=1 Tax=Tri... [more]
A0A8J1XID2_OWEFU7.190e-3044.85Gamma-tubulin complex component n=1 Tax=Owenia fus... [more]
UPI001B88B9741.840e-2942.26gamma-tubulin complex component 2-like isoform X1 ... [more]
C3ZPX6_BRAFL6.470e-2943.45Gamma-tubulin complex component n=4 Tax=Branchiost... [more]
A7RR43_NEMVE1.480e-2841.67Gamma-tubulin complex component (Fragment) n=1 Tax... [more]
UPI00138FDB9E1.610e-2841.67gamma-tubulin complex component 2 n=1 Tax=Nematost... [more]
A0A7S1EKM6_HEMAN2.470e-2842.57Spindle pole body component (Fragment) n=1 Tax=Hem... [more]
A0A3M6TQJ9_POCDA4.040e-2842.26Gamma-tubulin complex component n=5 Tax=Pocillopor... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig14976contigEcto-sp13_S_contig14976:1255..2831 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score309.3
Seed ortholog evalue1.1e-81
Seed eggNOG ortholog2880.D8LBZ5
Model size525
KEGG koko:K16569
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000226,GO:0000278,GO:0000280,GO:0000923,GO:0000928,GO:0000930,GO:0003674,GO:0005198,GO:0005200,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005815,GO:0005816,GO:0005822,GO:0005824,GO:0005856,GO:0006996,GO:0007010,GO:0007017,GO:0007020,GO:0007049,GO:0007051,GO:0007052,GO:0008092,GO:0008150,GO:0008275,GO:0009987,GO:0015630,GO:0015631,GO:0016043,GO:0022402,GO:0022414,GO:0022607,GO:0031109,GO:0031122,GO:0032153,GO:0032155,GO:0032991,GO:0034622,GO:0043015,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044422,GO:0044424,GO:0044430,GO:0044444,GO:0044446,GO:0044450,GO:0044464,GO:0046785,GO:0048285,GO:0051225,GO:0051258,GO:0051321,GO:0051415,GO:0051418,GO:0065003,GO:0070925,GO:0071840,GO:0090307,GO:0097435,GO:0140014,GO:1902850,GO:1903047
Exons4
EggNOG free text desc.microtubule nucleation by interphase microtubule organizing center
EggNOG OGsKOG2001@1,KOG2001@2759
Cds size522
COG Functional cat.H
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03036,ko04147,ko04812
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462797.9845998-CDS-Ecto-sp13_S_contig14976:1254..13491681462797.9845998-CDS-Ecto-sp13_S_contig14976:1254..1349Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14976 1255..1349 +
1681462797.9972394-CDS-Ecto-sp13_S_contig14976:1776..19171681462797.9972394-CDS-Ecto-sp13_S_contig14976:1776..1917Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14976 1777..1917 +
1681462798.0103903-CDS-Ecto-sp13_S_contig14976:2242..24051681462798.0103903-CDS-Ecto-sp13_S_contig14976:2242..2405Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14976 2243..2405 +
1681462798.0195117-CDS-Ecto-sp13_S_contig14976:2706..28291681462798.0195117-CDS-Ecto-sp13_S_contig14976:2706..2829Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14976 2707..2829 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig14976.3768.1prot_Ecto-sp13_S_contig14976.3768.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig14976 1255..2829 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig14976.3768.1

>prot_Ecto-sp13_S_contig14976.3768.1 ID=prot_Ecto-sp13_S_contig14976.3768.1|Name=mRNA_Ecto-sp13_S_contig14976.3768.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=174bp
GEGGVASALPEAMQEQLLLDDLLYAMMGFAGSYVVVKGVGGSGRQGEAAA
PPASLYDLEFAVNVDGDSIDQSLAYLAERVLPLCNNYVRVNRFASERGQH
EFGKVAHALAAGVQRLLREYLVLVAQLESQFLQGKLSLQRLWFYVQPSMR
TMESLEALTVELKDSKGGEMLRRL
back to top

mRNA from alignment at Ecto-sp13_S_contig14976:1255..2831+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig14976.3768.1 ID=mRNA_Ecto-sp13_S_contig14976.3768.1|Name=mRNA_Ecto-sp13_S_contig14976.3768.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1577bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14976:1255..2831+ (Ectocarpus species13 EcNAP12_S_4_19m)
GGTGAAGGTGGGGTTGCGAGCGCCCTGCCGGAGGCCATGCAGGAGCAGCT GTTGCTGGACGACCTGCTGTACGCGATGATGGGGTTTGCGGGAAGGTGCG GTGGCGTTTTTTTATGACTTGGTTGTACATTGGGGAAACGAAAATACACA GGGAATACGGTGATGAGGTTATACTGCATGAGGTGGTAGTGGTGTGGTTC GGTGCTGTGCGCGTTTTTTCGTGAAGGGGCGTACTTCATCCGTTATCCTC TCGCGACCCCATTTTCGTGTGTTCTGCTTTCCGCTACTCTTCCCGCTCGC TGGTCGTCCAGTAACCCATCCCCATTTCTCTTGCTCTAAGTCTGTCCCTC CCAGTAAATACTCCGATGGATGGCTCGTACCCATGTTTATCTTCTCACCG TCCATGGCTATTTTTTGGGCATTTGTCCGTCGTTTTGTCCTGGTCATCTT TTTTATTTTTTTCTGGTGATATTTATCCCTCTCTTTTGCCTCTCTCTGTT TGTGCACCCACCCATCCGATAGCTACGTTGTGGTCAAGGGCGTCGGCGGC AGCGGGAGGCAAGGCGAGGCAGCCGCTCCTCCAGCCTCCCTGTACGATCT GGAGTTCGCCGTGAACGTTGATGGAGATTCGATCGATCAGTCGCTGGCCT ATCTCGCCGAGAGGTGAGTTCGACACGTAGACATGTAGTTACTGTACCTG CAGAGGCCAGACCTGGATTGGGCTGTCGTTGCACGGAGCTGTTGGGCCTC AAGGGTGAAGACCTTACGCTAAGAGCTAGAAACGCCCATCCCGGGTGTTC CCTACCGTTCTATGTAGCTAACCCACTTTCATCAACACCAAGGCCTTTAC AGGCCCGTCGAGGGGCCAAGCTGAAAGCCGGCTGAGAGCTGCAGAGATGC TCTCTCGCGCTCCGCAGCAACCTGCTGTTTAATTTGGCGACCTAAGCTCC TCCCCCCCTCCTCCCGTTTGGCGTAAATGTCAATTCAGGGTTTTGCCTCT CTGCAACAACTACGTTCGGGTGAACCGATTCGCGTCCGAGCGAGGGCAGC ACGAGTTCGGCAAGGTGGCGCATGCCCTTGCCGCGGGGGTGCAGCGGCTG CTCCGAGAGTACCTCGTGCTCGTTGCACAGCTGGAGAGCCAGTTCTTACA GGTAGGTGCCCGCCCGGAGGATGGTTGGAGTTAGTTCTCCCTGCTGTGTG TTTCGTGCCCTTTGTCCTAGGCCGAAGGTTCGCCTACAGCGGGAATTCGT CCCTTGCTTCGCAAGCTTCATAGAACACAATAGTCAAGGCAAGGCGACAA TTCTACGCCGCCGTTCATGTCCGACTTACTACGAGATGAATGTTCGTGAC TACCCCCCGAATAGTGTAACCACTACGGAATACAAAGCATGAGCACCCTC CCCCCGCCCAACCGCCGTACCCCTCTTGTGGTGGAAAACTGCAAACTCCC AGGGGAAGCTGTCGCTCCAACGGCTTTGGTTCTACGTACAGCCGTCGATG CGGACGATGGAATCGCTGGAGGCGTTGACGGTGGAGCTTAAGGACAGCAA GGGCGGGGAGATGCTCCGGCGGCTGAG
back to top

Coding sequence (CDS) from alignment at Ecto-sp13_S_contig14976:1255..2831+

>mRNA_Ecto-sp13_S_contig14976.3768.1 ID=mRNA_Ecto-sp13_S_contig14976.3768.1|Name=mRNA_Ecto-sp13_S_contig14976.3768.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=522bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14976:1255..2831+ (Ectocarpus species13 EcNAP12_S_4_19m)
GGTGAAGGTGGGGTTGCGAGCGCCCTGCCGGAGGCCATGCAGGAGCAGCT
GTTGCTGGACGACCTGCTGTACGCGATGATGGGGTTTGCGGGAAGCTACG
TTGTGGTCAAGGGCGTCGGCGGCAGCGGGAGGCAAGGCGAGGCAGCCGCT
CCTCCAGCCTCCCTGTACGATCTGGAGTTCGCCGTGAACGTTGATGGAGA
TTCGATCGATCAGTCGCTGGCCTATCTCGCCGAGAGGGTTTTGCCTCTCT
GCAACAACTACGTTCGGGTGAACCGATTCGCGTCCGAGCGAGGGCAGCAC
GAGTTCGGCAAGGTGGCGCATGCCCTTGCCGCGGGGGTGCAGCGGCTGCT
CCGAGAGTACCTCGTGCTCGTTGCACAGCTGGAGAGCCAGTTCTTACAGG
GGAAGCTGTCGCTCCAACGGCTTTGGTTCTACGTACAGCCGTCGATGCGG
ACGATGGAATCGCTGGAGGCGTTGACGGTGGAGCTTAAGGACAGCAAGGG
CGGGGAGATGCTCCGGCGGCTG
back to top