mRNA_Ecto-sp13_S_contig14942.3754.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig14942.3754.1
Unique NamemRNA_Ecto-sp13_S_contig14942.3754.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig14942.3754.1 vs. uniprot
Match: D7G815_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G815_ECTSI)

HSP 1 Score: 511 bits (1315), Expect = 1.550e-175
Identity = 282/316 (89.24%), Postives = 294/316 (93.04%), Query Frame = 1
Query:    1 MEVLCEADASNLAQVEKKAETIKQRGNEHFMAKRYKEAIECYSQAISLSASNHVLHGNRSAAHGGLRAWALAAADARRSVELEPGYTKGFYRLAQALIALDELAEAELAIENGLRADPAANKEMAALMRRITGSRRRHTQQVGKGAAATATGGGRGVPKKAAKSIDLGRAGLYDDKEAPDNDTQDQASAAQTSEAGSLKALFSSLRESVLAASSNGSLGNGPARHDLDGVFSKLIEPEQFRRIALSRLPEDERRRAPSSLQELLRTPLYASALEKALPRVVSTAASVLEGVKRRGREQGDIMDSATEEALKPQAIR 948
            MEVLCEADASN AQVEK AE IKQRGNEHFMAKR+KEA+ECYSQAISLSASNHVL+GNRSAAHGGL AWALAAADARRSVE+EPGYTKGFYRLAQALIALDE AEAE AIENGLRADPAANKEMAAL RRI GSRRRHTQQVGKGA A AT     VPKKAAKSIDLGRAGLYDDKEAPDN+TQDQ    Q +EAGSLKALFSSLR+S++AASSNGSLGNGPARHDLDGVFSKLIEPEQFRRIALSRLPEDERR+APSS QELLRTPLYASALEKALPRVVSTAASVLEGVKRRGREQGDIMDSATEEALKPQ ++
Sbjct:    1 MEVLCEADASNPAQVEKNAEAIKQRGNEHFMAKRHKEAVECYSQAISLSASNHVLYGNRSAAHGGLGAWALAAADARRSVEIEPGYTKGFYRLAQALIALDESAEAESAIENGLRADPAANKEMAALKRRIAGSRRRHTQQVGKGAVA-ATXXXXXVPKKAAKSIDLGRAGLYDDKEAPDNNTQDQ----QANEAGSLKALFSSLRDSIVAASSNGSLGNGPARHDLDGVFSKLIEPEQFRRIALSRLPEDERRQAPSSFQELLRTPLYASALEKALPRVVSTAASVLEGVKRRGREQGDIMDSATEEALKPQVLQ 311          
BLAST of mRNA_Ecto-sp13_S_contig14942.3754.1 vs. uniprot
Match: A0A6H5KPA0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPA0_9PHAE)

HSP 1 Score: 308 bits (788), Expect = 1.510e-102
Identity = 175/197 (88.83%), Postives = 179/197 (90.86%), Query Frame = 1
Query:    1 MEVLCEADASNLAQVEKKAETIKQRGNEHFMAKRYKEAIECYSQAISLSASNHVLHGNRSAAHGGLRAWALAAADARRSVELEPGYTKGFYRLAQALIALDELAEAELAIENGLRADPAANKEMAALMRRITGSRRRHTQQVGKGAAATATGGGRGVPKKAAKSIDLGRAGLYDDKEAPDNDTQDQASAAQTSEAGS 591
            MEVL EADASN AQVEK AE IKQRGNEHFMAKR+KEA+ECYSQAISLSASNHVL+GNRSAAHGGL AWALAAADARRSVELEPGYTKGFYRLAQALIA DELAEAE AIENGLRADP ANKEMAAL RRITGSRRRHTQQVGKGA A  TGGG GVPKKAAKSIDL RAGLYDDKEAPDN TQDQASAAQ+   GS
Sbjct:    1 MEVLSEADASNPAQVEKNAEAIKQRGNEHFMAKRHKEAVECYSQAISLSASNHVLYGNRSAAHGGLGAWALAAADARRSVELEPGYTKGFYRLAQALIASDELAEAESAIENGLRADP-ANKEMAALKRRITGSRRRHTQQVGKGAVAATTGGG-GVPKKAAKSIDLRRAGLYDDKEAPDNRTQDQASAAQSHGFGS 195          
BLAST of mRNA_Ecto-sp13_S_contig14942.3754.1 vs. uniprot
Match: A0A662WJB4_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WJB4_9STRA)

HSP 1 Score: 130 bits (326), Expect = 3.150e-30
Identity = 106/303 (34.98%), Postives = 158/303 (52.15%), Query Frame = 1
Query:   55 AETIKQRGNEHFMAKRYKEAIECYSQAISLSASNHVLHGNRSAAHGGLRAWALAAADARRSVELEPGYTKGFYRLAQALIALDELAEAELAIENGLRAD-----PAANKEMAALMRRITGSRRRHTQQVGKGAAATATGGGRGVPKKAAKSIDLGRAGLYDDKEAPDNDTQDQASAAQTSEAGSLKALFSSLRESVLAASSNGSLGNGPARHDLDGVFSKLIEPEQFRRIALSRLPEDERRRAPSSLQELLRTPLYASALEKALPRVVSTAASVLEGVKRRGREQGDIMDSATEEALKPQAIR 948
            AET++QRGN  F  + +  A E Y+QAI+L ASNH+L GNRSAA   L  +  A ADA +S+EL+P ++KGF R A A  +L +   A  A E  LR +     P A K +  L      +       V KG  +TA        KK+       RA +Y +KE       D+  A++  E  + ++    L+  +   +  G    G +    DG+F+KL++  +F+R+    +P+++   AP +LQ LL  P Y   L   +P+V + A SVL  VK+RG  QG++MD ATE  L PQ ++
Sbjct:   28 AETLRQRGNTAFQQRDFAAACEFYTQAIALQASNHLLFGNRSAALHQLGRFQEALADAEKSLELDPTWSKGFLRKAAACESLQDWPSAISAYEELLRLESSQSTPEARKAVTKLRSLKVKASLTDQPAVKKGFFSTA--------KKS-------RASIYAEKEDVVKVVVDKTGASRV-EDPTERSWRRMLQRLLDGCNKRGVNNQGESVVLDDGIFAKLLQEGEFQRLIYPGIPKEQLVHAPKNLQTLLEDPWYEQELVAIMPKVQAKAESVLTNVKKRGAAQGEVMDPATERMLLPQILQ 314          
BLAST of mRNA_Ecto-sp13_S_contig14942.3754.1 vs. uniprot
Match: A0A329RR12_9STRA (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A329RR12_9STRA)

HSP 1 Score: 129 bits (325), Expect = 3.940e-30
Identity = 105/316 (33.23%), Postives = 156/316 (49.37%), Query Frame = 1
Query:   19 ADASNLAQVEKKAETIKQRGNEHFMAKRYKEAIECYSQAISLSASNHVLHGNRSAAHGGLRAWALAAADARRSVELEPGYTKGFYRLAQALIALDELAEAELAIENGLRA-DPAANKEMAALMRRITGSRRRHTQQVGKGAAATATGGGRGVPKKAAKSIDLG---RAGLYDDKEAPDNDTQDQASAAQTSEA--GSLKALFSSLRESVLAASSNGSLGNGPARHDLDGVFSKLIEPEQFRRIALSRLPEDERRRAPSSLQELLRTPLYASALEKALPRVVSTAASVLEGVKRRGREQGDIMDSATEEALKPQAIR 948
            AD S  A    +AE ++Q+GN  F  ++++EA E Y+QAI L   NH+L GNRSAA   L+ +  A  DA  +++L P +TKG+ R                A E  LR  D  ++ E      R+   +R+ T+                  KKA K   L    ++ +Y +KE  D D+  ++      +   GS K   +S  ESV+                 DGVF+KL++ E+F+R+    +P+++   AP +LQ LL  P Y   L   +P+V + AASVL  VK+RG +QGDIMD ATE  L PQ ++
Sbjct:   10 ADGSFDASAADQAEALRQQGNASFKRRQFQEAKELYTQAIQLQNGNHLLFGNRSAACHQLKEYEEALKDAEMAIKLSPKWTKGYLRXXXXXXXXXXXXXXXAAYEEILRLEDDKSSTEANKAAERVKVLKRKPTE------------------KKAVKKGFLSGKVKSSIYAEKEGMDQDSTRRSWKLMLKKLLDGSNKRGINSRGESVVLD---------------DGVFAKLLQEEEFQRLIFPGIPKEQLVHAPKNLQTLLEDPWYEQELLALMPKVQAKAASVLANVKKRGAQQGDIMDPATERMLTPQVLQ 292          
BLAST of mRNA_Ecto-sp13_S_contig14942.3754.1 vs. uniprot
Match: A0A225V227_9STRA (Heat shock protein (Fragment) n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225V227_9STRA)

HSP 1 Score: 125 bits (313), Expect = 1.840e-29
Identity = 100/298 (33.56%), Postives = 149/298 (50.00%), Query Frame = 1
Query:   55 AETIKQRGNEHFMAKRYKEAIECYSQAISLSASNHVLHGNRSAAHGGLRAWALAAADARRSVELEPGYTKGFYRLAQALIALDELAEAELAIENGLRADPAANKEMAALMRRITGSRRRHTQQVGKGAAATATGGGRGVPKKAAKSIDLGRAGLYDDKEAPDNDTQDQASAAQTSEAGSLKALFSSLRESVLAASSNGSLGNGPARHDLDGVFSKLIEPEQFRRIALSRLPEDERRRAPSSLQELLRTPLYASALEKALPRVVSTAASVLEGVKRRGREQGDIMDSATEEALKPQAIR 948
            AE+++Q+GN  F  +++ EA + Y+QA+ L  SNH+L GNRSA    L+ +  A  DA +++EL P + K + R A A  +L  L+EA  A E  LR D  + +   A  +     R      V KG           +  KA  SI       Y +KE  D DT  +          S K +   L +     +  G    G +    DGVF+KL++ ++F+R+    +P ++   AP +LQ LL  P Y   L   +P+V + A+SVL  VK+RG EQG+IMD  TE  L PQ ++
Sbjct:   24 AESLRQQGNNAFKLRQFHEAKKLYTQALQLQNSNHLLFGNRSAVCFQLKEYRQALDDANKAIELSPNWAKAYLRKAAACESLQLLSEAIAAYEKVLRLDDKSPEAKKAATKVKFLKRNIDKNAVKKGF----------LSGKAKSSI-------YSEKEDLDQDTTQR----------SWKLMLKKLLD---GCNKRGINSQGESVVLDDGVFAKLLDEDEFQRLIYPGIPMEQLVHAPKNLQMLLEDPWYEQELLGLMPKVQTKASSVLNNVKKRGAEQGEIMDLVTERMLLPQVLQ 291          
BLAST of mRNA_Ecto-sp13_S_contig14942.3754.1 vs. uniprot
Match: A0A484DSG2_BRELC (Uncharacterized protein n=2 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DSG2_BRELC)

HSP 1 Score: 119 bits (299), Expect = 1.340e-26
Identity = 94/300 (31.33%), Postives = 156/300 (52.00%), Query Frame = 1
Query:   52 KAETIKQRGNEHFMAKRYKEAIECYSQAISLSASNHVLHGNRSAAHGGLRAWALAAADARRSVELEPGYTKGFYRLAQALIALDELAEAELAIENGLR-ADPAANKEMAALMRRITGSRRRHTQQVGKGAAATATGGGRGVPKKAAKSIDLGRAGLYDDKEAPDNDTQDQASAAQTSEAGSLKALFSSLRESVLAASSNGSLGNGPARHDLDGVFSKLIEPEQFRRIALSRLPEDERRRAPSSLQELLRTPLYASALEKALPRVVSTAASVLEGVKRRGREQGDIMDSATEEALKPQAIR 948
            KAE ++Q GNE F  + + +A + Y++AI L + + VL+GNRSAA+  L  +  A ADA  +++L P ++KG+ R A A  +L++   A  A E  LR A+  ++ E      R+   +++   Q               + +K   + ++ +  LY +KE  D D   +          S K + S L +       N S G     +D  G+F+KL++ ++F+R+    +P+++   AP +LQ LL  P Y   L   +P+V + AASVL  VK++G +QGD+MD ATE    PQ ++
Sbjct:   20 KAEQLRQDGNEAFRRREFLKAKDLYTEAILLQSGHSVLYGNRSAANHHLDEYEAARADAEIAIKLSPNWSKGYLRKAIACESLNDWRNAIAAYEQILRLAEVQSSSEATKAAERVKVLKKKIGTQ--------------NIVRKGFLTGEV-KGSLYSEKEGMDQDATWR----------SWKLMLSKLLDGCNKRGKN-SCGESVVLND--GIFAKLLQEDEFQRLIYPGIPKEQLVYAPKNLQMLLEDPWYEQELLTLMPKVQAKAASVLINVKKKGADQGDVMDMATERMFMPQVLQ 291          
BLAST of mRNA_Ecto-sp13_S_contig14942.3754.1 vs. uniprot
Match: A0A6G0L2M2_9STRA (Uncharacterized protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6G0L2M2_9STRA)

HSP 1 Score: 110 bits (275), Expect = 2.240e-23
Identity = 102/303 (33.66%), Postives = 140/303 (46.20%), Query Frame = 1
Query:   55 AETIKQRGNEHFMAKRYKEAIECYSQAISLSASNHVLHGNRSAAHGGLRAWALAAADARRSVELEPGYTKGFYRLAQALIALDELAEAELAIENGLR-----ADPAANKEMAALMRRITGSRRRHTQQVGKGAAATATGGGRGVPKKAAKSIDLGRAGLYDDKEAPDNDTQDQASAAQTSEAGSLKALFSSLRESVLAASSNGSLGNGPARHDLDGVFSKLIEPEQFRRIALSRLPEDERRRAPSSLQELLRTPLYASALEKALPRVVSTAASVLEGVKRRGREQGDIMDSATEEALKPQAIR 948
            AE ++Q GN  F  + ++ A   YSQA++L AS HVL+GNRSAA   L  ++ A  DA R+V+L P ++K   R A A  +L    EA  A E  L      A+ A   + AA   R+                      G    ++        R  LY +KE       D A   +     S K +   L +   A    G    G      DGVF+KL+   +F+ +    +P ++   AP +LQ LL  P Y   L   +P V + AASVL  VKRRG EQGD+MDSATE  L PQ ++
Sbjct:   15 AEALRQEGNAAFKRREFQLAKSLYSQALALQAS-HVLYGNRSAACHQLGDFSAALQDAERAVQLAPTWSKAQLRKAAACESLQRWDEAAAAYEQVLALQVAGAEDAPEAKKAAARLRVLRD-------------------GHAAVRRGFLVAGRTRVALYWEKE-------DVADPRR-----SWKLMLKQLLDGCNA---RGVDSRGQRVVLDDGVFAKLLSEREFQALVYPGIPAEQLDHAPKNLQTLLEDPWYEQELLAVMPAVQAKAASVLANVKRRGAEQGDVMDSATERMLLPQVLQ 282          
BLAST of mRNA_Ecto-sp13_S_contig14942.3754.1 vs. uniprot
Match: A0A8K1FMM1_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FMM1_PYTOL)

HSP 1 Score: 106 bits (264), Expect = 7.330e-22
Identity = 95/301 (31.56%), Postives = 147/301 (48.84%), Query Frame = 1
Query:   55 AETIKQRGNEHFMAKRYKEAIECYSQAISLSASNHVLHGNRSAAHGGLRAWALAAADARRSVELEPGYTKGFYRLAQALIALDELAEAELAIENGL---RADPAANKEMAALMRRITGSRRRHTQQVGKGAAATATGGGRGVPKKAAKSIDLGRAGLYDDKEAPDNDTQDQASAAQTSEAGSLKALFSSLRESVLAASSNGSLGNGPARHDLDGVFSKLIEPEQFRRIALSRLPEDERRRAPSSLQELLRTPLYASALEKALPRVVSTAASVLEGVKRRGREQGDIMDSATEEALKPQAIR 948
            +ET++++GN  F  K Y+ A   Y+QAI+ +  NH+L+GNRSA+   L+ +  A  DA  ++ L P + KG+ R A A   L    +A  A +  +    +D AA  + A    RI     +    V KGA              +AK+    ++ +Y +KE       D A+     E G  +     L+      + +G  G G      DGVF+KL     F+ +    +P+++   AP ++ ELL  P Y   L   +P+V   A SVL  VK+RG  QGDIMD+ATE+ L+PQ ++
Sbjct:   32 SETLREKGNVAFQNKSYEMARSYYTQAIAKNPQNHLLYGNRSASSCHLKDYDRALEDAEEAITLAPKWVKGYLRKATACEGLKRWNDAMEAYKQIIVLSASDSAAETKKANT--RIA----QIETLVSKGAVQKGF-----FETSSAKA----KSSIYAEKEDIVMPVVDTATGQTRLEDGDERRWRYMLKRLKDGCNKHGVNGKGERVVLDDGVFAKLRNEHDFQALIFPGIPKEQLVHAPKNILELLEDPWYEQELLSLMPKVQQKADSVLTNVKKRGAAQGDIMDAATEQMLRPQVLQ 317          
BLAST of mRNA_Ecto-sp13_S_contig14942.3754.1 vs. uniprot
Match: W2Q3Y9_PHYPN (Uncharacterized protein n=7 Tax=Phytophthora TaxID=4783 RepID=W2Q3Y9_PHYPN)

HSP 1 Score: 103 bits (257), Expect = 5.740e-21
Identity = 94/313 (30.03%), Postives = 141/313 (45.05%), Query Frame = 1
Query:   19 ADASNLAQVEKKAETIKQRGNEHFMAKRYKEAIECYSQAISLSASNHVLHGNRSAAHGGLRAWALAAADARRSVELEPGYTKGFYRLAQALIALDELAEAELAIENGLRADP---AANKEMAALMRRITGSRRRHTQQVGKGAAATATGGGRGVPKKAAKSIDLGRAGLYDDKEAPDNDTQDQASAAQTSEAGSLKALFSSLRESVLAASSNGSLGNGPARHDLDGVFSKLIEPEQFRRIALSRLPEDERRRAPSSLQELLRTPLYASALEKALPRVVSTAASVLEGVKRRGREQGDIMDSATEEALKPQAIR 948
            AD S  A    +AE ++Q+GNE F  ++++EA + Y+QAI L   NH+L GNRSAA   L+ +  A  DA                                A E  LR +    +   E AA   ++     +  + V KG  +       G  K A          +Y +KE  + DT  +          S K +   L +     +  G    G +    DGVF+KL++  +F+++    +P+++   AP +LQ LL  P Y   L   +P+V + AASVL  VK+RG EQGD+MD ATE  L PQ ++
Sbjct:   10 ADGSFDASAADQAEALRQQGNEAFQQRKFQEAKDLYTQAIELQNGNHLLFGNRSAACHHLKEYEEALEDAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAYEQLLRVESDKSSTGAEKAADRVKVLKRNAKENKAVKKGFLS-------GKAKSA----------IYSEKEGVEQDTTQR----------SWKLMLKKLLD---GCNKRGINSRGESVVLDDGVFAKLLQENKFQQLIYPGIPKEQLVHAPKNLQTLLEDPWYEQELLALMPKVEAKAASVLANVKKRGAEQGDVMDPATERMLLPQVLQ 292          
BLAST of mRNA_Ecto-sp13_S_contig14942.3754.1 vs. uniprot
Match: W2L389_PHYPR (B box-type domain-containing protein n=3 Tax=Phytophthora parasitica TaxID=4792 RepID=W2L389_PHYPR)

HSP 1 Score: 103 bits (258), Expect = 6.470e-21
Identity = 94/313 (30.03%), Postives = 141/313 (45.05%), Query Frame = 1
Query:   19 ADASNLAQVEKKAETIKQRGNEHFMAKRYKEAIECYSQAISLSASNHVLHGNRSAAHGGLRAWALAAADARRSVELEPGYTKGFYRLAQALIALDELAEAELAIENGLRADP---AANKEMAALMRRITGSRRRHTQQVGKGAAATATGGGRGVPKKAAKSIDLGRAGLYDDKEAPDNDTQDQASAAQTSEAGSLKALFSSLRESVLAASSNGSLGNGPARHDLDGVFSKLIEPEQFRRIALSRLPEDERRRAPSSLQELLRTPLYASALEKALPRVVSTAASVLEGVKRRGREQGDIMDSATEEALKPQAIR 948
            AD S  A    +AE ++Q+GNE F  ++++EA + Y+QAI L   NH+L GNRSAA   L+ +  A  DA                                A E  LR +    +   E AA   ++     +  + V KG  +       G  K A          +Y +KE  + DT  +          S K +   L +     +  G    G +    DGVF+KL++  +F+++    +P+++   AP +LQ LL  P Y   L   +P+V + AASVL  VK+RG EQGD+MD ATE  L PQ ++
Sbjct:  640 ADGSFDASAADQAEALRQQGNEAFQQRKFQEAKDLYTQAIELQNGNHLLFGNRSAACHHLKEYEEALEDAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAYEQLLRVESDKSSTGAEKAADRVKVLKRNAKENKAVKKGFLS-------GKAKSA----------IYSEKEGVEQDTTQR----------SWKLMLKKLLD---GCNKRGINSRGESVVLDDGVFAKLLQENEFQQLIYPGIPKEQLVHAPKNLQTLLEDPWYEQELLALMPKVEAKAASVLANVKKRGAEQGDVMDPATERMLLPQVLQ 922          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14942.3754.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G815_ECTSI1.550e-17589.24Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KPA0_9PHAE1.510e-10288.83Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A662WJB4_9STRA3.150e-3034.98Uncharacterized protein n=2 Tax=Nothophytophthora ... [more]
A0A329RR12_9STRA3.940e-3033.23Uncharacterized protein n=4 Tax=Phytophthora TaxID... [more]
A0A225V227_9STRA1.840e-2933.56Heat shock protein (Fragment) n=1 Tax=Phytophthora... [more]
A0A484DSG2_BRELC1.340e-2631.33Uncharacterized protein n=2 Tax=Bremia lactucae Ta... [more]
A0A6G0L2M2_9STRA2.240e-2333.66Uncharacterized protein n=5 Tax=Phytophthora TaxID... [more]
A0A8K1FMM1_PYTOL7.330e-2231.56Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
W2Q3Y9_PHYPN5.740e-2130.03Uncharacterized protein n=7 Tax=Phytophthora TaxID... [more]
W2L389_PHYPR6.470e-2130.03B box-type domain-containing protein n=3 Tax=Phyto... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig14942contigEcto-sp13_S_contig14942:380..3557 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score515.8
Seed ortholog evalue1.5e-143
Seed eggNOG ortholog2880.D7G815
Model size948
KEGG koko:K09553
KEGG Pathwayko05020,map05020
Hectar predicted targeting categoryother localisation
Exons7
EggNOG free text desc.positive regulation of catalytic activity in other organism involved in symbiotic interaction
EggNOG OGsCOG0457@1,KOG0548@2759
Cds size948
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03110
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig14942.3754.1prot_Ecto-sp13_S_contig14942.3754.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig14942 380..3557 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462796.8958151-CDS-Ecto-sp13_S_contig14942:379..4501681462796.8958151-CDS-Ecto-sp13_S_contig14942:379..450Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14942 380..450 +
1681462796.9172695-CDS-Ecto-sp13_S_contig14942:991..10991681462796.9172695-CDS-Ecto-sp13_S_contig14942:991..1099Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14942 992..1099 +
1681462796.9290977-CDS-Ecto-sp13_S_contig14942:1325..14111681462796.9290977-CDS-Ecto-sp13_S_contig14942:1325..1411Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14942 1326..1411 +
1681462796.939035-CDS-Ecto-sp13_S_contig14942:1682..17721681462796.939035-CDS-Ecto-sp13_S_contig14942:1682..1772Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14942 1683..1772 +
1681462796.9489236-CDS-Ecto-sp13_S_contig14942:2106..23251681462796.9489236-CDS-Ecto-sp13_S_contig14942:2106..2325Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14942 2107..2325 +
1681462796.9586213-CDS-Ecto-sp13_S_contig14942:2726..29351681462796.9586213-CDS-Ecto-sp13_S_contig14942:2726..2935Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14942 2727..2935 +
1681462796.9685843-CDS-Ecto-sp13_S_contig14942:3392..35571681462796.9685843-CDS-Ecto-sp13_S_contig14942:3392..3557Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14942 3393..3557 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig14942.3754.1

>prot_Ecto-sp13_S_contig14942.3754.1 ID=prot_Ecto-sp13_S_contig14942.3754.1|Name=mRNA_Ecto-sp13_S_contig14942.3754.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=316bp
MEVLCEADASNLAQVEKKAETIKQRGNEHFMAKRYKEAIECYSQAISLSA
SNHVLHGNRSAAHGGLRAWALAAADARRSVELEPGYTKGFYRLAQALIAL
DELAEAELAIENGLRADPAANKEMAALMRRITGSRRRHTQQVGKGAAATA
TGGGRGVPKKAAKSIDLGRAGLYDDKEAPDNDTQDQASAAQTSEAGSLKA
LFSSLRESVLAASSNGSLGNGPARHDLDGVFSKLIEPEQFRRIALSRLPE
DERRRAPSSLQELLRTPLYASALEKALPRVVSTAASVLEGVKRRGREQGD
IMDSATEEALKPQAIR
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mRNA from alignment at Ecto-sp13_S_contig14942:380..3557+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig14942.3754.1 ID=mRNA_Ecto-sp13_S_contig14942.3754.1|Name=mRNA_Ecto-sp13_S_contig14942.3754.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3178bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14942:380..3557+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGAGGTCCTTTGCGAAGCTGACGCATCGAATCTTGCACAAGTCGAAAA GAAGGCGGAAACCATCAAGCAGTGAGTATTTTCCTTTGTCAACTACCACC GATCGGATCTGATCGCTGTGGACAGCGAGAGTACACAAACACTCCGCACT CACACAGAGCCGCGGGATTGTTTGACCCCTAGCGCAGCTGCCGTCCAACA CTGATCGTAGCGATAGAGACACTGTTATGGTGTAAGCTGGCCTTCTAAGA GCGACGGAATTCCCCATGGTGTCCTTAGTCTCTTTGCTCCGCGTCAGGAA TACCTGGTACTTATATGCATACCACACCCCAACTGCTACATGCATGTACA CCAGTACACCAGTCAATCGAGAGGGACAGCAGCAAGCTAAACACAGCAGA GAGAGAGAGAGAGAGAGAGAGAGAGAGAGTAGAGAGAAAGAGCCTGCCCG TCGTAGTCAAGTTCGCACGCGTTACACGAAGCCTTACATGGGTATAGACT ATATGCCATGAAGACTATATGCCAACAAGATAAATACGCCATCCACCAAA TCTCAACGAGACGCCTTTGAACCAGCGCTAGACCGCCGTTCCGCTGGTGC TCGCAACAACAGACGAGGCAACGAGCACTTCATGGCCAAGCGTTACAAAG AAGCCATAGAGTGCTACAGCCAGGCCATAAGCTTGAGTGCGTCAAATCAC GTCTTGCATGGCAACAGGAGGTGAGTGCCTCACGCCAACCACAAGCAGAG ACAGATAGACTGGACCTCCTCTTCCGGTTACCACAGCAGTCGGCTGACGT TCTGCGGACAGGTACATCCGCATGAACTTGTCGCCGAAGCTGTGTAGAGG CCTAACATGTGTCACGTGCTGTCCTCGCTTGCTGCAGCCCTCCCTCCCGG GAGCTTCCCAGTCTGAAACACTTTATGTGCGTCGTACCTTCGACAGTGCC GCCCACGGTGGTCTTCGCGCCTGGGCACTGGCTGCTGCCGACGCCAGGAG AAGTGTCGAGCTAGAGCCGGGATATACGAAAGGTACCTAGGGCAGTTCTT GAGCGCGTGGGCATCTACACTGCTGTGGGATGTGATAGGGGCATTGGCTA GGGTCCTGCGCATGCAGTGGCACGAGCGTGGAGGTCGTATCTCACTCTGT TCTTACACAAATATCCGGGCACGCACGTGTATCGGGGGGACAGCAGACGT ACAGGCGGCAGTGTTAGATACGCACAGCTTGTAACCGCTAACTAACCAGC ATCGCGTTACACCTTGCGCCTCGCATGTCCCCTTGGTTCGTTCGTGGTGG CAGGGTTCTACCGCTTGGCACAGGCGCTCATCGCATTAGACGAGTTGGCT GAGGCGGAATTGGCTATTGAAAACGGTCTACGCGCCGATCCCGGTGCGCA AATCCGATCCATTCCTTTCGGCAGTCGGCCGCAGTAGTGGGTTGGGCTAA GTATGCACCGACGTGCGTGCCATAGGCCCTGCTGGTGAACAATTAGCTGT AGCATGGCTAGTTGGGGGTCTCTCAAGGTTGAAACCGTCGCCGTGCTTGC GGTTGTAGTAGTCTACCTGCTGTACACGAGGATATTCGTTGTTGGTCCTC TAGTCTACCGTCGTTTCCCTCCCACGGCATGTAGGCAGCGAGCCTACCGC CCAACCAGCAAACGCTTAGACTACCAACCTCGCGTGTTGGTGCAACAACC GACGCTTTTCCCGCTCACGAACGGCAGCAGCGAACAAAGAGATGGCTGCA TTGATGAGAAGAATCACTGGCAGCCGCCGCAGACATACGCAGCAGGTTGG CAAGGGAGCAGCAGCAACAGCAACAGGAGGAGGAAGAGGAGTGCCAAAGA AGGCCGCGAAAAGCATCGATTTAGGTCGGGCCGGCCTGTACGACGACAAG GAAGCGCCCGACAACGACACGCAAGACCAGGCGAGCGCTGCCCAGAGTCA TGGCCGTCTTTCACGTCTGGAGGCTGCGATACATTTTGCTCGAAACTAGC TGCCCGTAGCTGCCCAAGCTCGCTTGCGGCAAGGCCGGCTACTGGCGGTG ATAGCCTGGAAGGACCATGTTACCACTTCCTTTTCACGCGCCAGGCCCGG TGATGTGTTGCCCGTAGTGTTTTTTCGGTTCTAGTATTTGTTTGCGATGT TTTTGTTTTCCTGCGTTGGACGTGTGGGGCCCGCCGCCGCCCCTCCAAAA GACCGCGTCACACGCAACGGCATCCTTGCAGAGGCAGGCTCAAACAGCCA TGCTTGTTCTCCACGCTGCTCAAACTCCGAGCTCCCGTTCTTGTCCTTCC TCGTTCGGACCTGCACGCCTACTCTGCAAACAAACCCTTCCAGCAAGCGA GCGAAGCCGGGAGCTTGAAAGCGCTGTTCTCTTCTCTGCGAGAGAGTGTA TTAGCTGCTTCATCGAACGGGTCGCTCGGCAACGGTCCCGCGCGTCACGA CTTGGACGGCGTGTTCTCGAAGCTTATCGAGCCGGAGCAATTCCGACGAA TAGCGCTCTCCCGGCTGCCGGAAGACGAGCGCCGACGAGCGCCGTCCTCG CTTCAGGTTTTGCAAAAATGAGACGCTATTTTGTTTGGTTGTTTGTCGCC GATGGTGTCTACTTAGTGCGTGCCTTTGGCCATGGGGACGCATGAGTCGG AGCGCGTGTGTAGCGTGCACCGAACTGCGCGGAGGCTTTTGAATAGCGTC TTCGAGCAAGATTCCGGGGTCGTCCTTCCCTTGTTGAGTGGCTGTCCAAC CCTTCTGAAGGGTGCACAGTGCCAGTGGCGTGACGCTTGTATCCGTGGTT GTCCTTGCGACGGAGCGCGTCGCACATCACAAAAAGACCAGAGCCGGCAG AACTTGCAGAGACTAAGTGGGGTTTTGAGAAGCTTCAGCCAAGAACAGAG ATAGGTCGTGGCGCACCTACTCTTTTGGCCTAAGATTTTTCTTGCCCACG ACCTGCTTGTCTATCGTTGAACCACCTTTTCTTAACGTCTAGTTCCCCTT GCTCTTCTTGCAGGAGCTGCTCCGAACCCCGCTTTACGCGTCGGCCTTGG AAAAAGCTCTCCCTCGAGTCGTGTCTACGGCGGCTTCCGTGCTGGAAGGA GTCAAGAGGAGGGGGCGCGAACAGGGGGACATCATGGATTCTGCGACCGA GGAGGCTCTCAAACCCCAGGCAATACGG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig14942:380..3557+

>mRNA_Ecto-sp13_S_contig14942.3754.1 ID=mRNA_Ecto-sp13_S_contig14942.3754.1|Name=mRNA_Ecto-sp13_S_contig14942.3754.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=948bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14942:380..3557+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGAGGTCCTTTGCGAAGCTGACGCATCGAATCTTGCACAAGTCGAAAA
GAAGGCGGAAACCATCAAGCAACGAGGCAACGAGCACTTCATGGCCAAGC
GTTACAAAGAAGCCATAGAGTGCTACAGCCAGGCCATAAGCTTGAGTGCG
TCAAATCACGTCTTGCATGGCAACAGGAGTGCCGCCCACGGTGGTCTTCG
CGCCTGGGCACTGGCTGCTGCCGACGCCAGGAGAAGTGTCGAGCTAGAGC
CGGGATATACGAAAGGGTTCTACCGCTTGGCACAGGCGCTCATCGCATTA
GACGAGTTGGCTGAGGCGGAATTGGCTATTGAAAACGGTCTACGCGCCGA
TCCCGCAGCGAACAAAGAGATGGCTGCATTGATGAGAAGAATCACTGGCA
GCCGCCGCAGACATACGCAGCAGGTTGGCAAGGGAGCAGCAGCAACAGCA
ACAGGAGGAGGAAGAGGAGTGCCAAAGAAGGCCGCGAAAAGCATCGATTT
AGGTCGGGCCGGCCTGTACGACGACAAGGAAGCGCCCGACAACGACACGC
AAGACCAGGCGAGCGCTGCCCAGACGAGCGAAGCCGGGAGCTTGAAAGCG
CTGTTCTCTTCTCTGCGAGAGAGTGTATTAGCTGCTTCATCGAACGGGTC
GCTCGGCAACGGTCCCGCGCGTCACGACTTGGACGGCGTGTTCTCGAAGC
TTATCGAGCCGGAGCAATTCCGACGAATAGCGCTCTCCCGGCTGCCGGAA
GACGAGCGCCGACGAGCGCCGTCCTCGCTTCAGGAGCTGCTCCGAACCCC
GCTTTACGCGTCGGCCTTGGAAAAAGCTCTCCCTCGAGTCGTGTCTACGG
CGGCTTCCGTGCTGGAAGGAGTCAAGAGGAGGGGGCGCGAACAGGGGGAC
ATCATGGATTCTGCGACCGAGGAGGCTCTCAAACCCCAGGCAATACGG
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