mRNA_Ecto-sp13_S_contig14942.3754.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig14942.3754.1 vs. uniprot
Match: D7G815_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G815_ECTSI) HSP 1 Score: 511 bits (1315), Expect = 1.550e-175 Identity = 282/316 (89.24%), Postives = 294/316 (93.04%), Query Frame = 1
Query: 1 MEVLCEADASNLAQVEKKAETIKQRGNEHFMAKRYKEAIECYSQAISLSASNHVLHGNRSAAHGGLRAWALAAADARRSVELEPGYTKGFYRLAQALIALDELAEAELAIENGLRADPAANKEMAALMRRITGSRRRHTQQVGKGAAATATGGGRGVPKKAAKSIDLGRAGLYDDKEAPDNDTQDQASAAQTSEAGSLKALFSSLRESVLAASSNGSLGNGPARHDLDGVFSKLIEPEQFRRIALSRLPEDERRRAPSSLQELLRTPLYASALEKALPRVVSTAASVLEGVKRRGREQGDIMDSATEEALKPQAIR 948
MEVLCEADASN AQVEK AE IKQRGNEHFMAKR+KEA+ECYSQAISLSASNHVL+GNRSAAHGGL AWALAAADARRSVE+EPGYTKGFYRLAQALIALDE AEAE AIENGLRADPAANKEMAAL RRI GSRRRHTQQVGKGA A AT VPKKAAKSIDLGRAGLYDDKEAPDN+TQDQ Q +EAGSLKALFSSLR+S++AASSNGSLGNGPARHDLDGVFSKLIEPEQFRRIALSRLPEDERR+APSS QELLRTPLYASALEKALPRVVSTAASVLEGVKRRGREQGDIMDSATEEALKPQ ++
Sbjct: 1 MEVLCEADASNPAQVEKNAEAIKQRGNEHFMAKRHKEAVECYSQAISLSASNHVLYGNRSAAHGGLGAWALAAADARRSVEIEPGYTKGFYRLAQALIALDESAEAESAIENGLRADPAANKEMAALKRRIAGSRRRHTQQVGKGAVA-ATXXXXXVPKKAAKSIDLGRAGLYDDKEAPDNNTQDQ----QANEAGSLKALFSSLRDSIVAASSNGSLGNGPARHDLDGVFSKLIEPEQFRRIALSRLPEDERRQAPSSFQELLRTPLYASALEKALPRVVSTAASVLEGVKRRGREQGDIMDSATEEALKPQVLQ 311
BLAST of mRNA_Ecto-sp13_S_contig14942.3754.1 vs. uniprot
Match: A0A6H5KPA0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPA0_9PHAE) HSP 1 Score: 308 bits (788), Expect = 1.510e-102 Identity = 175/197 (88.83%), Postives = 179/197 (90.86%), Query Frame = 1
Query: 1 MEVLCEADASNLAQVEKKAETIKQRGNEHFMAKRYKEAIECYSQAISLSASNHVLHGNRSAAHGGLRAWALAAADARRSVELEPGYTKGFYRLAQALIALDELAEAELAIENGLRADPAANKEMAALMRRITGSRRRHTQQVGKGAAATATGGGRGVPKKAAKSIDLGRAGLYDDKEAPDNDTQDQASAAQTSEAGS 591
MEVL EADASN AQVEK AE IKQRGNEHFMAKR+KEA+ECYSQAISLSASNHVL+GNRSAAHGGL AWALAAADARRSVELEPGYTKGFYRLAQALIA DELAEAE AIENGLRADP ANKEMAAL RRITGSRRRHTQQVGKGA A TGGG GVPKKAAKSIDL RAGLYDDKEAPDN TQDQASAAQ+ GS
Sbjct: 1 MEVLSEADASNPAQVEKNAEAIKQRGNEHFMAKRHKEAVECYSQAISLSASNHVLYGNRSAAHGGLGAWALAAADARRSVELEPGYTKGFYRLAQALIASDELAEAESAIENGLRADP-ANKEMAALKRRITGSRRRHTQQVGKGAVAATTGGG-GVPKKAAKSIDLRRAGLYDDKEAPDNRTQDQASAAQSHGFGS 195
BLAST of mRNA_Ecto-sp13_S_contig14942.3754.1 vs. uniprot
Match: A0A662WJB4_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WJB4_9STRA) HSP 1 Score: 130 bits (326), Expect = 3.150e-30 Identity = 106/303 (34.98%), Postives = 158/303 (52.15%), Query Frame = 1
Query: 55 AETIKQRGNEHFMAKRYKEAIECYSQAISLSASNHVLHGNRSAAHGGLRAWALAAADARRSVELEPGYTKGFYRLAQALIALDELAEAELAIENGLRAD-----PAANKEMAALMRRITGSRRRHTQQVGKGAAATATGGGRGVPKKAAKSIDLGRAGLYDDKEAPDNDTQDQASAAQTSEAGSLKALFSSLRESVLAASSNGSLGNGPARHDLDGVFSKLIEPEQFRRIALSRLPEDERRRAPSSLQELLRTPLYASALEKALPRVVSTAASVLEGVKRRGREQGDIMDSATEEALKPQAIR 948
AET++QRGN F + + A E Y+QAI+L ASNH+L GNRSAA L + A ADA +S+EL+P ++KGF R A A +L + A A E LR + P A K + L + V KG +TA KK+ RA +Y +KE D+ A++ E + ++ L+ + + G G + DG+F+KL++ +F+R+ +P+++ AP +LQ LL P Y L +P+V + A SVL VK+RG QG++MD ATE L PQ ++
Sbjct: 28 AETLRQRGNTAFQQRDFAAACEFYTQAIALQASNHLLFGNRSAALHQLGRFQEALADAEKSLELDPTWSKGFLRKAAACESLQDWPSAISAYEELLRLESSQSTPEARKAVTKLRSLKVKASLTDQPAVKKGFFSTA--------KKS-------RASIYAEKEDVVKVVVDKTGASRV-EDPTERSWRRMLQRLLDGCNKRGVNNQGESVVLDDGIFAKLLQEGEFQRLIYPGIPKEQLVHAPKNLQTLLEDPWYEQELVAIMPKVQAKAESVLTNVKKRGAAQGEVMDPATERMLLPQILQ 314
BLAST of mRNA_Ecto-sp13_S_contig14942.3754.1 vs. uniprot
Match: A0A329RR12_9STRA (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A329RR12_9STRA) HSP 1 Score: 129 bits (325), Expect = 3.940e-30 Identity = 105/316 (33.23%), Postives = 156/316 (49.37%), Query Frame = 1
Query: 19 ADASNLAQVEKKAETIKQRGNEHFMAKRYKEAIECYSQAISLSASNHVLHGNRSAAHGGLRAWALAAADARRSVELEPGYTKGFYRLAQALIALDELAEAELAIENGLRA-DPAANKEMAALMRRITGSRRRHTQQVGKGAAATATGGGRGVPKKAAKSIDLG---RAGLYDDKEAPDNDTQDQASAAQTSEA--GSLKALFSSLRESVLAASSNGSLGNGPARHDLDGVFSKLIEPEQFRRIALSRLPEDERRRAPSSLQELLRTPLYASALEKALPRVVSTAASVLEGVKRRGREQGDIMDSATEEALKPQAIR 948
AD S A +AE ++Q+GN F ++++EA E Y+QAI L NH+L GNRSAA L+ + A DA +++L P +TKG+ R A E LR D ++ E R+ +R+ T+ KKA K L ++ +Y +KE D D+ ++ + GS K +S ESV+ DGVF+KL++ E+F+R+ +P+++ AP +LQ LL P Y L +P+V + AASVL VK+RG +QGDIMD ATE L PQ ++
Sbjct: 10 ADGSFDASAADQAEALRQQGNASFKRRQFQEAKELYTQAIQLQNGNHLLFGNRSAACHQLKEYEEALKDAEMAIKLSPKWTKGYLRXXXXXXXXXXXXXXXAAYEEILRLEDDKSSTEANKAAERVKVLKRKPTE------------------KKAVKKGFLSGKVKSSIYAEKEGMDQDSTRRSWKLMLKKLLDGSNKRGINSRGESVVLD---------------DGVFAKLLQEEEFQRLIFPGIPKEQLVHAPKNLQTLLEDPWYEQELLALMPKVQAKAASVLANVKKRGAQQGDIMDPATERMLTPQVLQ 292
BLAST of mRNA_Ecto-sp13_S_contig14942.3754.1 vs. uniprot
Match: A0A225V227_9STRA (Heat shock protein (Fragment) n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225V227_9STRA) HSP 1 Score: 125 bits (313), Expect = 1.840e-29 Identity = 100/298 (33.56%), Postives = 149/298 (50.00%), Query Frame = 1
Query: 55 AETIKQRGNEHFMAKRYKEAIECYSQAISLSASNHVLHGNRSAAHGGLRAWALAAADARRSVELEPGYTKGFYRLAQALIALDELAEAELAIENGLRADPAANKEMAALMRRITGSRRRHTQQVGKGAAATATGGGRGVPKKAAKSIDLGRAGLYDDKEAPDNDTQDQASAAQTSEAGSLKALFSSLRESVLAASSNGSLGNGPARHDLDGVFSKLIEPEQFRRIALSRLPEDERRRAPSSLQELLRTPLYASALEKALPRVVSTAASVLEGVKRRGREQGDIMDSATEEALKPQAIR 948
AE+++Q+GN F +++ EA + Y+QA+ L SNH+L GNRSA L+ + A DA +++EL P + K + R A A +L L+EA A E LR D + + A + R V KG + KA SI Y +KE D DT + S K + L + + G G + DGVF+KL++ ++F+R+ +P ++ AP +LQ LL P Y L +P+V + A+SVL VK+RG EQG+IMD TE L PQ ++
Sbjct: 24 AESLRQQGNNAFKLRQFHEAKKLYTQALQLQNSNHLLFGNRSAVCFQLKEYRQALDDANKAIELSPNWAKAYLRKAAACESLQLLSEAIAAYEKVLRLDDKSPEAKKAATKVKFLKRNIDKNAVKKGF----------LSGKAKSSI-------YSEKEDLDQDTTQR----------SWKLMLKKLLD---GCNKRGINSQGESVVLDDGVFAKLLDEDEFQRLIYPGIPMEQLVHAPKNLQMLLEDPWYEQELLGLMPKVQTKASSVLNNVKKRGAEQGEIMDLVTERMLLPQVLQ 291
BLAST of mRNA_Ecto-sp13_S_contig14942.3754.1 vs. uniprot
Match: A0A484DSG2_BRELC (Uncharacterized protein n=2 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DSG2_BRELC) HSP 1 Score: 119 bits (299), Expect = 1.340e-26 Identity = 94/300 (31.33%), Postives = 156/300 (52.00%), Query Frame = 1
Query: 52 KAETIKQRGNEHFMAKRYKEAIECYSQAISLSASNHVLHGNRSAAHGGLRAWALAAADARRSVELEPGYTKGFYRLAQALIALDELAEAELAIENGLR-ADPAANKEMAALMRRITGSRRRHTQQVGKGAAATATGGGRGVPKKAAKSIDLGRAGLYDDKEAPDNDTQDQASAAQTSEAGSLKALFSSLRESVLAASSNGSLGNGPARHDLDGVFSKLIEPEQFRRIALSRLPEDERRRAPSSLQELLRTPLYASALEKALPRVVSTAASVLEGVKRRGREQGDIMDSATEEALKPQAIR 948
KAE ++Q GNE F + + +A + Y++AI L + + VL+GNRSAA+ L + A ADA +++L P ++KG+ R A A +L++ A A E LR A+ ++ E R+ +++ Q + +K + ++ + LY +KE D D + S K + S L + N S G +D G+F+KL++ ++F+R+ +P+++ AP +LQ LL P Y L +P+V + AASVL VK++G +QGD+MD ATE PQ ++
Sbjct: 20 KAEQLRQDGNEAFRRREFLKAKDLYTEAILLQSGHSVLYGNRSAANHHLDEYEAARADAEIAIKLSPNWSKGYLRKAIACESLNDWRNAIAAYEQILRLAEVQSSSEATKAAERVKVLKKKIGTQ--------------NIVRKGFLTGEV-KGSLYSEKEGMDQDATWR----------SWKLMLSKLLDGCNKRGKN-SCGESVVLND--GIFAKLLQEDEFQRLIYPGIPKEQLVYAPKNLQMLLEDPWYEQELLTLMPKVQAKAASVLINVKKKGADQGDVMDMATERMFMPQVLQ 291
BLAST of mRNA_Ecto-sp13_S_contig14942.3754.1 vs. uniprot
Match: A0A6G0L2M2_9STRA (Uncharacterized protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6G0L2M2_9STRA) HSP 1 Score: 110 bits (275), Expect = 2.240e-23 Identity = 102/303 (33.66%), Postives = 140/303 (46.20%), Query Frame = 1
Query: 55 AETIKQRGNEHFMAKRYKEAIECYSQAISLSASNHVLHGNRSAAHGGLRAWALAAADARRSVELEPGYTKGFYRLAQALIALDELAEAELAIENGLR-----ADPAANKEMAALMRRITGSRRRHTQQVGKGAAATATGGGRGVPKKAAKSIDLGRAGLYDDKEAPDNDTQDQASAAQTSEAGSLKALFSSLRESVLAASSNGSLGNGPARHDLDGVFSKLIEPEQFRRIALSRLPEDERRRAPSSLQELLRTPLYASALEKALPRVVSTAASVLEGVKRRGREQGDIMDSATEEALKPQAIR 948
AE ++Q GN F + ++ A YSQA++L AS HVL+GNRSAA L ++ A DA R+V+L P ++K R A A +L EA A E L A+ A + AA R+ G ++ R LY +KE D A + S K + L + A G G DGVF+KL+ +F+ + +P ++ AP +LQ LL P Y L +P V + AASVL VKRRG EQGD+MDSATE L PQ ++
Sbjct: 15 AEALRQEGNAAFKRREFQLAKSLYSQALALQAS-HVLYGNRSAACHQLGDFSAALQDAERAVQLAPTWSKAQLRKAAACESLQRWDEAAAAYEQVLALQVAGAEDAPEAKKAAARLRVLRD-------------------GHAAVRRGFLVAGRTRVALYWEKE-------DVADPRR-----SWKLMLKQLLDGCNA---RGVDSRGQRVVLDDGVFAKLLSEREFQALVYPGIPAEQLDHAPKNLQTLLEDPWYEQELLAVMPAVQAKAASVLANVKRRGAEQGDVMDSATERMLLPQVLQ 282
BLAST of mRNA_Ecto-sp13_S_contig14942.3754.1 vs. uniprot
Match: A0A8K1FMM1_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FMM1_PYTOL) HSP 1 Score: 106 bits (264), Expect = 7.330e-22 Identity = 95/301 (31.56%), Postives = 147/301 (48.84%), Query Frame = 1
Query: 55 AETIKQRGNEHFMAKRYKEAIECYSQAISLSASNHVLHGNRSAAHGGLRAWALAAADARRSVELEPGYTKGFYRLAQALIALDELAEAELAIENGL---RADPAANKEMAALMRRITGSRRRHTQQVGKGAAATATGGGRGVPKKAAKSIDLGRAGLYDDKEAPDNDTQDQASAAQTSEAGSLKALFSSLRESVLAASSNGSLGNGPARHDLDGVFSKLIEPEQFRRIALSRLPEDERRRAPSSLQELLRTPLYASALEKALPRVVSTAASVLEGVKRRGREQGDIMDSATEEALKPQAIR 948
+ET++++GN F K Y+ A Y+QAI+ + NH+L+GNRSA+ L+ + A DA ++ L P + KG+ R A A L +A A + + +D AA + A RI + V KGA +AK+ ++ +Y +KE D A+ E G + L+ + +G G G DGVF+KL F+ + +P+++ AP ++ ELL P Y L +P+V A SVL VK+RG QGDIMD+ATE+ L+PQ ++
Sbjct: 32 SETLREKGNVAFQNKSYEMARSYYTQAIAKNPQNHLLYGNRSASSCHLKDYDRALEDAEEAITLAPKWVKGYLRKATACEGLKRWNDAMEAYKQIIVLSASDSAAETKKANT--RIA----QIETLVSKGAVQKGF-----FETSSAKA----KSSIYAEKEDIVMPVVDTATGQTRLEDGDERRWRYMLKRLKDGCNKHGVNGKGERVVLDDGVFAKLRNEHDFQALIFPGIPKEQLVHAPKNILELLEDPWYEQELLSLMPKVQQKADSVLTNVKKRGAAQGDIMDAATEQMLRPQVLQ 317
BLAST of mRNA_Ecto-sp13_S_contig14942.3754.1 vs. uniprot
Match: W2Q3Y9_PHYPN (Uncharacterized protein n=7 Tax=Phytophthora TaxID=4783 RepID=W2Q3Y9_PHYPN) HSP 1 Score: 103 bits (257), Expect = 5.740e-21 Identity = 94/313 (30.03%), Postives = 141/313 (45.05%), Query Frame = 1
Query: 19 ADASNLAQVEKKAETIKQRGNEHFMAKRYKEAIECYSQAISLSASNHVLHGNRSAAHGGLRAWALAAADARRSVELEPGYTKGFYRLAQALIALDELAEAELAIENGLRADP---AANKEMAALMRRITGSRRRHTQQVGKGAAATATGGGRGVPKKAAKSIDLGRAGLYDDKEAPDNDTQDQASAAQTSEAGSLKALFSSLRESVLAASSNGSLGNGPARHDLDGVFSKLIEPEQFRRIALSRLPEDERRRAPSSLQELLRTPLYASALEKALPRVVSTAASVLEGVKRRGREQGDIMDSATEEALKPQAIR 948
AD S A +AE ++Q+GNE F ++++EA + Y+QAI L NH+L GNRSAA L+ + A DA A E LR + + E AA ++ + + V KG + G K A +Y +KE + DT + S K + L + + G G + DGVF+KL++ +F+++ +P+++ AP +LQ LL P Y L +P+V + AASVL VK+RG EQGD+MD ATE L PQ ++
Sbjct: 10 ADGSFDASAADQAEALRQQGNEAFQQRKFQEAKDLYTQAIELQNGNHLLFGNRSAACHHLKEYEEALEDAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAYEQLLRVESDKSSTGAEKAADRVKVLKRNAKENKAVKKGFLS-------GKAKSA----------IYSEKEGVEQDTTQR----------SWKLMLKKLLD---GCNKRGINSRGESVVLDDGVFAKLLQENKFQQLIYPGIPKEQLVHAPKNLQTLLEDPWYEQELLALMPKVEAKAASVLANVKKRGAEQGDVMDPATERMLLPQVLQ 292
BLAST of mRNA_Ecto-sp13_S_contig14942.3754.1 vs. uniprot
Match: W2L389_PHYPR (B box-type domain-containing protein n=3 Tax=Phytophthora parasitica TaxID=4792 RepID=W2L389_PHYPR) HSP 1 Score: 103 bits (258), Expect = 6.470e-21 Identity = 94/313 (30.03%), Postives = 141/313 (45.05%), Query Frame = 1
Query: 19 ADASNLAQVEKKAETIKQRGNEHFMAKRYKEAIECYSQAISLSASNHVLHGNRSAAHGGLRAWALAAADARRSVELEPGYTKGFYRLAQALIALDELAEAELAIENGLRADP---AANKEMAALMRRITGSRRRHTQQVGKGAAATATGGGRGVPKKAAKSIDLGRAGLYDDKEAPDNDTQDQASAAQTSEAGSLKALFSSLRESVLAASSNGSLGNGPARHDLDGVFSKLIEPEQFRRIALSRLPEDERRRAPSSLQELLRTPLYASALEKALPRVVSTAASVLEGVKRRGREQGDIMDSATEEALKPQAIR 948
AD S A +AE ++Q+GNE F ++++EA + Y+QAI L NH+L GNRSAA L+ + A DA A E LR + + E AA ++ + + V KG + G K A +Y +KE + DT + S K + L + + G G + DGVF+KL++ +F+++ +P+++ AP +LQ LL P Y L +P+V + AASVL VK+RG EQGD+MD ATE L PQ ++
Sbjct: 640 ADGSFDASAADQAEALRQQGNEAFQQRKFQEAKDLYTQAIELQNGNHLLFGNRSAACHHLKEYEEALEDAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAYEQLLRVESDKSSTGAEKAADRVKVLKRNAKENKAVKKGFLS-------GKAKSA----------IYSEKEGVEQDTTQR----------SWKLMLKKLLD---GCNKRGINSRGESVVLDDGVFAKLLQENEFQQLIYPGIPKEQLVHAPKNLQTLLEDPWYEQELLALMPKVEAKAASVLANVKKRGAEQGDVMDPATERMLLPQVLQ 922 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14942.3754.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig14942.3754.1 >prot_Ecto-sp13_S_contig14942.3754.1 ID=prot_Ecto-sp13_S_contig14942.3754.1|Name=mRNA_Ecto-sp13_S_contig14942.3754.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=316bp MEVLCEADASNLAQVEKKAETIKQRGNEHFMAKRYKEAIECYSQAISLSAback to top mRNA from alignment at Ecto-sp13_S_contig14942:380..3557+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig14942.3754.1 ID=mRNA_Ecto-sp13_S_contig14942.3754.1|Name=mRNA_Ecto-sp13_S_contig14942.3754.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3178bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14942:380..3557+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig14942:380..3557+ >mRNA_Ecto-sp13_S_contig14942.3754.1 ID=mRNA_Ecto-sp13_S_contig14942.3754.1|Name=mRNA_Ecto-sp13_S_contig14942.3754.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=948bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14942:380..3557+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |