prot_Ecto-sp13_S_contig14894.3723.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp13_S_contig14894.3723.1
Unique Name	prot_Ecto-sp13_S_contig14894.3723.1
Type	polypeptide
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length	198

Homology

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BLAST of mRNA_Ecto-sp13_S_contig14894.3723.1 vs. uniprot
Match: A0A6H5L299_9PHAE (Beta-galactosidase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L299_9PHAE)

HSP 1 Score: 382 bits (981), Expect = 2.240e-120
Identity = 190/197 (96.45%), Postives = 192/197 (97.46%), Query Frame = 0

Query:    1 MTAEVEPLKGVTTRDCLSLARVGVLLQLPSGFGRVEWFGKGPFECYQDRKHGATTGVFSGTVEDQHVPYMVPSENGGKADVRWMALRKGEGGAGLLMQAERGAVFQAASVSLHSAAELHKAKRTVDLAPRTSSEDPVYVHLDHRSMGVGGDNSWYPDVVHREYTVPADKAYSFRVRLRALVPGAAASLAALVPGASS 197
            MTAEVEPLKGVTTRDCLSLARVG+LLQLP GFGRVEWFGKGPFECYQDRKHGATTGVFSGTVEDQHVPYMVPSENGGKADVRWMALRKGEGGAGLLMQAE GAVFQAASVSLHSAAELHKAKRTVDLAPRTSSEDPV+VHLDHRSMGVGGDNSWYPDVVHREYTVPADKAYSFRVRLRALVPGAAA LAAL PGA S
Sbjct: 1360 MTAEVEPLKGVTTRDCLSLARVGILLQLPPGFGRVEWFGKGPFECYQDRKHGATTGVFSGTVEDQHVPYMVPSENGGKADVRWMALRKGEGGAGLLMQAETGAVFQAASVSLHSAAELHKAKRTVDLAPRTSSEDPVFVHLDHRSMGVGGDNSWYPDVVHREYTVPADKAYSFRVRLRALVPGAAAPLAALAPGARS 1556

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BLAST of mRNA_Ecto-sp13_S_contig14894.3723.1 vs. uniprot
Match: A0A453GP05_AEGTS (Beta-galactosidase n=1 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453GP05_AEGTS)

HSP 1 Score: 145 bits (366), Expect = 9.110e-39
Identity = 80/168 (47.62%), Postives = 97/168 (57.74%), Query Frame = 0

Query:   15 DCLSLARVGVLLQLPSGFGRVEWFGKGPFECYQDRKHGATTGVFSGTVEDQHVPYMVPSENGGKADVRWMALRKGEGGAGLLMQAERGAVFQAASVSLHSAAELHKAKRTVDLAPRTSSEDPVYVHLDHRSMGVGGDNSWYPDVVHREYTVPADKAYSFRVRLRALVP 182
            D   L RVGV+         V W+GKGPFECY DRK  A  GV+  +VED HVPY+VP E GG+ADVRW+AL+  +G  GL       +     S S + AAEL +A     L       D + VHLDHR MGVGGD+SW P  VH EY +P   +Y F +RLR L P
Sbjct:  183 DLPPLPRVGVVFNAEKSLNHVTWYGKGPFECYPDRKAAAHVGVYESSVEDLHVPYIVPGECGGRADVRWVALKNADG-FGLFASTHGESPPMQVSASYYGAAELDRATHQHKLV----KGDDIEVHLDHRHMGVGGDDSWTP-CVHEEYLLPPAASYRFSLRLRPLSP 344

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BLAST of mRNA_Ecto-sp13_S_contig14894.3723.1 vs. uniprot
Match: A0A4D9D5D8_9STRA (Beta-galactosidase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D5D8_9STRA)

HSP 1 Score: 150 bits (378), Expect = 2.420e-38
Identity = 84/190 (44.21%), Postives = 102/190 (53.68%), Query Frame = 0

Query:   13 TRDCLSLARVGVLLQLPSGFGRVEWFGKGPFECYQDRKHGATTGVFSGTVEDQHVPYMVPSENGGKADVRWMALRKGEGGAGLLMQAERGAVFQAA--------------------SVSLHSAAELHKAKRTVDLAPRTSSEDPVYVHLDHRSMGVGGDNSWYPDVVHREYTVPADKAYSFRVRLRALVP 182
            T+  L L RVGV LQLP  F  V W G GP E Y DRK      V    V D H PY+VPSENGG+ADVRW ALR  E   GLL++   G V +                      + S+HS  EL +A RT +L P       +YVH+DHR MGVGGDN+W PD++H E+ VP    + + V L  LVP
Sbjct: 1131 TKAPLHLPRVGVALQLPREFTDVSWLGLGPHESYSDRKRSGLLDVHHAHVRDLHTPYVVPSENGGRADVRWAALRDPESKMGLLLRCTNGPVHEVEDEGTPEKRNKSVHTPGTFQFNASMHSVRELEQATRTCEL-PTWEEAQRLYVHVDHRHMGVGGDNTWEPDLIHSEFLVPCVGTWEYDVYLSPLVP 1319

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BLAST of mRNA_Ecto-sp13_S_contig14894.3723.1 vs. uniprot
Match: I1HVA3_BRADI (Beta-galactosidase n=2 Tax=Brachypodium distachyon TaxID=15368 RepID=I1HVA3_BRADI)

HSP 1 Score: 149 bits (375), Expect = 6.000e-38
Identity = 79/168 (47.02%), Postives = 99/168 (58.93%), Query Frame = 0

Query:   15 DCLSLARVGVLLQLPSGFGRVEWFGKGPFECYQDRKHGATTGVFSGTVEDQHVPYMVPSENGGKADVRWMALRKGEGGAGLLMQAERGAVFQAASVSLHSAAELHKAKRTVDLAPRTSSEDPVYVHLDHRSMGVGGDNSWYPDVVHREYTVPADKAYSFRVRLRALVP 182
            D   L R+G++         V W+G+GPFECY DRK  A  GV+  +VED HVPY+VP E GG+ADVRW ALR  EG  GL       +     S S + AAEL +A     L       D + VHLDHR MG+GGD+SW P  VH +Y +P D+ Y+F VRLR L+P
Sbjct:  944 DLPPLPRIGIVFNTEKSLSHVTWYGRGPFECYPDRKAAAHVGVYESSVEDLHVPYIVPGECGGRADVRWTALRNAEG-FGLFASVHGESPPMQMSASYYGAAELDRATHKHKLV----KGDDIEVHLDHRHMGLGGDDSWTP-CVHEQYLLPPDRRYAFSVRLRPLLP 1105

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BLAST of mRNA_Ecto-sp13_S_contig14894.3723.1 vs. uniprot
Match: A0A0A9PK18_ARUDO (Beta-galactosidase n=1 Tax=Arundo donax TaxID=35708 RepID=A0A0A9PK18_ARUDO)

HSP 1 Score: 137 bits (346), Expect = 1.560e-37
Identity = 76/168 (45.24%), Postives = 96/168 (57.14%), Query Frame = 0

Query:   15 DCLSLARVGVLLQLPSGFGRVEWFGKGPFECYQDRKHGATTGVFSGTVEDQHVPYMVPSENGGKADVRWMALRKGEGGAGLLMQAERGAVFQAASVSLHSAAELHKAKRTVDLAPRTSSEDPVYVHLDHRSMGVGGDNSWYPDVVHREYTVPADKAYSFRVRLRALVP 182
            D   L RVGV+         V W+G+GPFECY DRK  A  GV+  +VED HVPY+ P E GG+ADVRWMALR  +G  GL       +     S S +  AEL +A     L       D + VHLDHR MG+GGD+SW P  VH +Y +P  + Y+F +RL  L+P
Sbjct:   22 DLPPLPRVGVVFNAEKSLSHVTWYGRGPFECYPDRKAAAHVGVYESSVEDLHVPYIAPGECGGRADVRWMALRNADG-VGLYASVHGDSPAMQMSASYYGTAELDRATHNHMLV----KGDDIEVHLDHRHMGLGGDDSWSP-CVHEQYLLPPTR-YAFSMRLCPLLP 182

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BLAST of mRNA_Ecto-sp13_S_contig14894.3723.1 vs. uniprot
Match: UPI00098E7475 (uncharacterized protein LOC109840411 isoform X1 n=1 Tax=Asparagus officinalis TaxID=4686 RepID=UPI00098E7475)

HSP 1 Score: 147 bits (370), Expect = 2.800e-37
Identity = 85/169 (50.30%), Postives = 98/169 (57.99%), Query Frame = 0

Query:   14 RDCLSLARVGVLLQLPSGFGRVEWFGKGPFECYQDRKHGATTGVFSGTVEDQHVPYMVPSENGGKADVRWMALRKGEGGAGLLMQAERGAVFQAASVSLHSAAELHKAKRTVDLAPRTSSEDPVYVHLDHRSMGVGGDNSWYPDVVHREYTVPADKAYSFRVRLRALVP 182
            RD   L RVGV L L      V W+GKGPFECY DRK  A  GV+   VED HVPY+VPSE GG+ADVRW+A R G GG GL       +     S S +  AEL +A    +L       D + VHLDH+ MGVGGD+SW P  VH +Y VP    YSF VRL  L P
Sbjct:  914 RDLPPLPRVGVELHLDKSLNNVTWYGKGPFECYPDRKEAAHVGVYESNVEDMHVPYIVPSECGGRADVRWVAFRNG-GGHGLFASIYGTSPPMQMSASYYGTAELDRATHNHELC----KGDDIEVHLDHKHMGVGGDDSWSP-CVHDQYLVPP-VPYSFSVRLCPLYP 1075

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BLAST of mRNA_Ecto-sp13_S_contig14894.3723.1 vs. uniprot
Match: A0A453GP09_AEGTS (Beta-galactosidase n=1 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453GP09_AEGTS)

HSP 1 Score: 145 bits (366), Expect = 9.110e-37
Identity = 80/168 (47.62%), Postives = 97/168 (57.74%), Query Frame = 0

Query:   15 DCLSLARVGVLLQLPSGFGRVEWFGKGPFECYQDRKHGATTGVFSGTVEDQHVPYMVPSENGGKADVRWMALRKGEGGAGLLMQAERGAVFQAASVSLHSAAELHKAKRTVDLAPRTSSEDPVYVHLDHRSMGVGGDNSWYPDVVHREYTVPADKAYSFRVRLRALVP 182
            D   L RVGV+         V W+GKGPFECY DRK  A  GV+  +VED HVPY+VP E GG+ADVRW+AL+  +G  GL       +     S S + AAEL +A     L       D + VHLDHR MGVGGD+SW P  VH EY +P   +Y F +RLR L P
Sbjct:  710 DLPPLPRVGVVFNAEKSLNHVTWYGKGPFECYPDRKAAAHVGVYESSVEDLHVPYIVPGECGGRADVRWVALKNADG-FGLFASTHGESPPMQVSASYYGAAELDRATHQHKLV----KGDDIEVHLDHRHMGVGGDDSWTP-CVHEEYLLPPAASYRFSLRLRPLSP 871

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BLAST of mRNA_Ecto-sp13_S_contig14894.3723.1 vs. uniprot
Match: A0A446QFS3_TRITD (Beta-galactosidase n=1 Tax=Triticum turgidum subsp. durum TaxID=4567 RepID=A0A446QFS3_TRITD)

HSP 1 Score: 141 bits (355), Expect = 2.470e-36
Identity = 78/168 (46.43%), Postives = 96/168 (57.14%), Query Frame = 0

Query:   15 DCLSLARVGVLLQLPSGFGRVEWFGKGPFECYQDRKHGATTGVFSGTVEDQHVPYMVPSENGGKADVRWMALRKGEGGAGLLMQAERGAVFQAASVSLHSAAELHKAKRTVDLAPRTSSEDPVYVHLDHRSMGVGGDNSWYPDVVHREYTVPADKAYSFRVRLRALVP 182
            D   L RVGV+         V W+G+GPFECY DRK  A  GV+   VED HVPY+VP E GG+ADVRW+AL+  +G  GL       +     S S + AAEL +A     L       D + VHLDHR MGVGGD+SW P  VH EY +    +Y F +RLR L+P
Sbjct:  288 DLPPLPRVGVVFNAEKSLNHVTWYGRGPFECYPDRKAAAHVGVYESGVEDLHVPYIVPGECGGRADVRWVALKNADG-FGLFASTHGESPPMQVSASYYGAAELDRATHQHKLV----KGDDIEVHLDHRHMGVGGDDSWTP-CVHEEYLLSPAASYRFSLRLRPLLP 449

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BLAST of mRNA_Ecto-sp13_S_contig14894.3723.1 vs. uniprot
Match: B8A0J1_MAIZE (Beta-galactosidase n=1 Tax=Zea mays TaxID=4577 RepID=B8A0J1_MAIZE)

HSP 1 Score: 139 bits (350), Expect = 7.760e-36
Identity = 78/168 (46.43%), Postives = 99/168 (58.93%), Query Frame = 0

Query:   15 DCLSLARVGVLLQLPSGFGRVEWFGKGPFECYQDRKHGATTGVFSGTVEDQHVPYMVPSENGGKADVRWMALRKGEGGAGLLMQAERGAVFQAASVSLHSAAELHKAKRTVDLAPRTSSEDPVYVHLDHRSMGVGGDNSWYPDVVHREYTVPADKAYSFRVRLRALVP 182
            D   L RVGV+         V W+G+GPFECY DRK  A  GV+  +VE+ HVPY+ P E GG+ADVRW+ALR   GG GL   A  G+     S S + AAEL +A        R    D + VHLDHR MG+GGD+SW P  VH +Y +P  + Y+F +RL  L+P
Sbjct:  256 DLPPLPRVGVVFSAGRSLSHVTWYGRGPFECYPDRKAAAHVGVYESSVEELHVPYIAPVECGGRADVRWVALRDA-GGLGLYASAHGGSPPMQMSASYYGAAELDRATHV----HRLVKGDDIEVHLDHRHMGLGGDDSWSP-CVHEQYLLPPTR-YAFSLRLCPLLP 416

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BLAST of mRNA_Ecto-sp13_S_contig14894.3723.1 vs. uniprot
Match: UPI001F5D8F99 (beta-galactosidase n=1 Tax=Lolium rigidum TaxID=89674 RepID=UPI001F5D8F99)

HSP 1 Score: 141 bits (356), Expect = 2.130e-35
Identity = 77/169 (45.56%), Postives = 103/169 (60.95%), Query Frame = 0

Query:   15 DCLSLARVGVLLQLPSGFGRVEWFGKGPFECYQDRKHGATTGVFSGTVEDQHVPYMVPSENGGKADVRWMALRKGEG-GAGLLMQAERGAVFQAASVSLHSAAELHKAKRTVDLAPRTSSEDPVYVHLDHRSMGVGGDNSWYPDVVHREYTVPADKAYSFRVRLRALVP 182
            D   + RVG++         V W+G+GPFECY DRK  A  GV+  +V+D HVPY+VP E GG+ADVRW+ALR  +G G    M +E  ++ Q  S S + A EL++A     L       D + VHLDHR MGVGGD+SW P  VH +Y +P   +Y+F VRLR ++P
Sbjct:  946 DLPPIPRVGIVFNAEKSLDHVTWYGRGPFECYPDRKAAAHVGVYESSVDDLHVPYIVPGECGGRADVRWVALRNADGYGIFASMHSEESSLMQM-SASYYGATELNRATHNHKLV----KGDDIEVHLDHRHMGVGGDDSWTP-CVHEQYLLPP-VSYAFSVRLRPVLP 1107

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig14894.3723.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig14894.3723.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5L299_9PHAE	2.240e-120	96.45	Beta-galactosidase n=2 Tax=Ectocarpus TaxID=2879 R...	[more]
A0A453GP05_AEGTS	9.110e-39	47.62	Beta-galactosidase n=1 Tax=Aegilops tauschii subsp...	[more]
A0A4D9D5D8_9STRA	2.420e-38	44.21	Beta-galactosidase n=2 Tax=Monodopsidaceae TaxID=4...	[more]
I1HVA3_BRADI	6.000e-38	47.02	Beta-galactosidase n=2 Tax=Brachypodium distachyon...	[more]
A0A0A9PK18_ARUDO	1.560e-37	45.24	Beta-galactosidase n=1 Tax=Arundo donax TaxID=3570...	[more]
UPI00098E7475	2.800e-37	50.30	uncharacterized protein LOC109840411 isoform X1 n=...	[more]
A0A453GP09_AEGTS	9.110e-37	47.62	Beta-galactosidase n=1 Tax=Aegilops tauschii subsp...	[more]
A0A446QFS3_TRITD	2.470e-36	46.43	Beta-galactosidase n=1 Tax=Triticum turgidum subsp...	[more]
B8A0J1_MAIZE	7.760e-36	46.43	Beta-galactosidase n=1 Tax=Zea mays TaxID=4577 Rep...	[more]
UPI001F5D8F99	2.130e-35	45.56	beta-galactosidase n=1 Tax=Lolium rigidum TaxID=89...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004199	Beta galactosidase small chain/ domain 5	SMART	SM01038	Bgal_small_N_2	coord: 2..178 e-value: 2.2E-14 score: 60.6
IPR004199	Beta galactosidase small chain/ domain 5	PFAM	PF02929	Bgal_small_N	coord: 14..177 e-value: 6.0E-46 score: 157.0
IPR014718	Glycoside hydrolase-type carbohydrate-binding	GENE3D	2.70.98.10		coord: 1..179 e-value: 2.6E-52 score: 179.9
None	No IPR available	PANTHER	PTHR46323:SF2	GLYCOSIDE HYDROLASE FAMILY 2 PROTEIN	coord: 16..183
IPR023933	Glycoside hydrolase, family 2, beta-galactosidase	PANTHER	PTHR46323	FAMILY NOT NAMED	coord: 16..183
IPR011013	Galactose mutarotase-like domain superfamily	SUPERFAMILY	74650	Galactose mutarotase-like	coord: 16..178

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig14894	contig	Ecto-sp13_S_contig14894:1457..3550 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig14894.3723.1	mRNA_Ecto-sp13_S_contig14894.3723.1	Ectocarpus species13 EcNAP12_S_4_19m	mRNA	Ecto-sp13_S_contig14894 408..4123 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp13_S_contig14894.3723.1 ID=prot_Ecto-sp13_S_contig14894.3723.1|Name=mRNA_Ecto-sp13_S_contig14894.3723.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=198bp
MTAEVEPLKGVTTRDCLSLARVGVLLQLPSGFGRVEWFGKGPFECYQDRK
HGATTGVFSGTVEDQHVPYMVPSENGGKADVRWMALRKGEGGAGLLMQAE
RGAVFQAASVSLHSAAELHKAKRTVDLAPRTSSEDPVYVHLDHRSMGVGG
DNSWYPDVVHREYTVPADKAYSFRVRLRALVPGAAASLAALVPGASS*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR004199	B-gal_small/dom_5
IPR014718	GH-type_carb-bd
IPR023933	Glyco_hydro_2_beta_Galsidase
IPR011013	Gal_mutarotase_sf_dom