prot_Ecto-sp13_S_contig14855.3699.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig14855.3699.1
Unique Nameprot_Ecto-sp13_S_contig14855.3699.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length139
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig14855.3699.1 vs. uniprot
Match: D8LT82_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT82_ECTSI)

HSP 1 Score: 142 bits (359), Expect = 9.880e-37
Identity = 81/117 (69.23%), Postives = 89/117 (76.07%), Query Frame = 0 
Query:   23 MSSTAMDDLNRLETHVRLGRDGQDADAGCAETVSTLSDGFHELQDISSRKNRKQLTSTEYALQEIRSRVRAIDERWEEVNVRATNTLDNIEEDDLDEKDPGRKRRSSNPVVDKRREA 139
            MSSTAMDDLN LETHVRL RDGQDADAGCAET+    + ++++   +                  RSRVRAIDERWEEVNVRATNTLDNIEEDDLDEKDPGRKRRSSNPV+DKRREA
Sbjct:    1 MSSTAMDDLNHLETHVRLCRDGQDADAGCAETL--FGNDYYQIPCTT------------------RSRVRAIDERWEEVNVRATNTLDNIEEDDLDEKDPGRKRRSSNPVIDKRREA 97
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14855.3699.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LT82_ECTSI9.880e-3769.23Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig14855contigEcto-sp13_S_contig14855:1394..2511 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig14855.3699.1mRNA_Ecto-sp13_S_contig14855.3699.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig14855 1326..2511 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig14855.3699.1 ID=prot_Ecto-sp13_S_contig14855.3699.1|Name=mRNA_Ecto-sp13_S_contig14855.3699.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=139bp
MPSAKRPLRKRTGRSGELLTPAMSSTAMDDLNRLETHVRLGRDGQDADAG
CAETVSTLSDGFHELQDISSRKNRKQLTSTEYALQEIRSRVRAIDERWEE
VNVRATNTLDNIEEDDLDEKDPGRKRRSSNPVVDKRREA
back to top