prot_Ecto-sp13_S_contig14853.3698.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig14853.3698.1
Unique Nameprot_Ecto-sp13_S_contig14853.3698.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length230
Homology
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BLAST of mRNA_Ecto-sp13_S_contig14853.3698.1 vs. uniprot
Match: D8LAV7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LAV7_ECTSI)

HSP 1 Score: 338 bits (866), Expect = 9.430e-110
Identity = 183/229 (79.91%), Postives = 189/229 (82.53%), Query Frame = 0 
Query:    1 MGSIDETAAREPSNTRHNDRASGSDPVARMLLCQSDDYDVAGVGSGVAPLHGPGXXXXXXXXXXXXSDSPALSRMTSAPSFVQHXXXXXXXRLHQPSPTAGTTVTFSTLTPKRKGDSPFSSERDASGCDHIAAAVEGEKRGKDAALLPSPRRDGGGGALPPALVRPVTASPRAFSVASAAGGGSAARDLREAGARGSDFGAKIGGEGGGRGPLLSPVAFRLHCPGDLEE 229
            MGSIDETAAREPSNTR+NDRASG DPVARMLL QSDDYDV GVG GV P HGP             SDSP LSRM SAPSFVQH       RLHQPSPTAGTTVTFSTLTPKRKGDSPFS ERDASGC ++A A EG++ GKDAALLPSPRRDGGGGALPPALVR  TASPRAFSVASA GGGSAARDLREAGARGSDFGAKIGG GG RG LL+PV FRLHCPGDLEE
Sbjct:  418 MGSIDETAAREPSNTRNNDRASGGDPVARMLLSQSDDYDVGGVGFGVTPPHGP-----DGGGSSNASDSPGLSRMKSAPSFVQHYRHYHHRRLHQPSPTAGTTVTFSTLTPKRKGDSPFSFERDASGCGNVAVAAEGDRGGKDAALLPSPRRDGGGGALPPALVRTATASPRAFSVASATGGGSAARDLREAGARGSDFGAKIGGSGG-RGRLLNPVEFRLHCPGDLEE 640
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BLAST of mRNA_Ecto-sp13_S_contig14853.3698.1 vs. uniprot
Match: A0A6H5JPD1_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPD1_9PHAE)

HSP 1 Score: 301 bits (772), Expect = 5.560e-96
Identity = 169/205 (82.44%), Postives = 175/205 (85.37%), Query Frame = 0 
Query:    1 MGSIDETAAREPSNTRHNDRASGSDPVARMLLCQSDDYDVAGVGSGVAPLHGPGXXXXXXXXXXXXSDSPALSRMTSAPSFVQHXXXXXXXRLHQPSPTAGTTVTFSTLTPKRKGDSPFSSERDASGCDHIAAAVEGEKRGKDAALLPSPRRDGGGGALPPALVRPVTASPRAFSVASAAGGGSAARDLREAGARGSDFGAKIGG 205
            +GSIDETAAREPS TRHNDRASGSDPVAR LLCQ DDYDV GVG GV P HGPG    XXX     SDSP LSRMTSAPSFVQH       RLHQPSPTAGTTVTFSTLTPKR+GDSPFSSERDASGC ++A A EG++ GKDAALLPSPRRDGGGGALPPALVR VTASPRAFSVASA GGGSAARDLREAGARGSDFGAKIGG
Sbjct:  417 IGSIDETAAREPSCTRHNDRASGSDPVARTLLCQPDDYDVTGVGFGVTPPHGPGGGSSXXXNA---SDSPGLSRMTSAPSFVQHRQHHQHRRLHQPSPTAGTTVTFSTLTPKRRGDSPFSSERDASGCGNVAVAAEGDRGGKDAALLPSPRRDGGGGALPPALVRRVTASPRAFSVASA-GGGSAARDLREAGARGSDFGAKIGG 617
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14853.3698.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LAV7_ECTSI9.430e-11079.91Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JPD1_9PHAE5.560e-9682.44Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig14853contigEcto-sp13_S_contig14853:1392..2827 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig14853.3698.1mRNA_Ecto-sp13_S_contig14853.3698.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig14853 2..2854 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig14853.3698.1 ID=prot_Ecto-sp13_S_contig14853.3698.1|Name=mRNA_Ecto-sp13_S_contig14853.3698.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=230bp
MGSIDETAAREPSNTRHNDRASGSDPVARMLLCQSDDYDVAGVGSGVAPL
HGPGGGGGGGGGGSNASDSPALSRMTSAPSFVQHHRHHHHRRLHQPSPTA
GTTVTFSTLTPKRKGDSPFSSERDASGCDHIAAAVEGEKRGKDAALLPSP
RRDGGGGALPPALVRPVTASPRAFSVASAAGGGSAARDLREAGARGSDFG
AKIGGEGGGRGPLLSPVAFRLHCPGDLEE*
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