mRNA_Ecto-sp13_S_contig14816.3673.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig14816.3673.1
Unique NamemRNA_Ecto-sp13_S_contig14816.3673.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig14816.3673.1 vs. uniprot
Match: A0A6H5KCV2_9PHAE (TOP1Ac domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCV2_9PHAE)

HSP 1 Score: 488 bits (1255), Expect = 1.660e-160
Identity = 273/306 (89.22%), Postives = 284/306 (92.81%), Query Frame = 2 
Query:   65 RRRPRGHQSLDDRCSILVGPYGGYLIPEASSGAVTGNDAVSSEVQDAEGRGGGEEGEGERKSSAVTLPYVAQDNLELLTVDLVERCLDSTYGGGDLLGQHPDTGEDIRIRMGRYGPFLECGGIQAAASAHVSTANKKDPTDLSLPSQPTPTELLQQRGEGGGQELGSASSDGETAGRGSHPXXXXXXXXXXNDTVVYSAEDVIAFGLGANATEDGXXXXXXXXXXXDRGVGTWYSAVSLERAVGLLSLPRVVCESHPTEGGAIEVGVGRFGVWIRHKDSYKNVPAGIDVLDVDEALAVRLTDEMIQ 982
            R R  G +SLDDRCSILVGPYGGYL+P+ASSGAVTG+DA  SEV+ AEG  GGEE EGE+KSSAVTLPYVAQDNLELLTVDLVERCLDSTY GGDLLGQHPDTGEDIRIRMGRYGPFLECGGIQAAASAHVSTANKKDPTDLSLPSQPTPT+LLQQRG GGGQELG++S DGE AGRG HPXXXXXX    NDTVVYSAEDVIAFGLGANATE+GXXXXXXXXXX D GVGTWYSAVSLERAVGLLSLPRVVCESHPTEGGAIE GVGRFGVW+RHKDSYKNVPAGIDVLDVDEALAVRLTDEMIQ
Sbjct:  469 RARLPGLESLDDRCSILVGPYGGYLVPKASSGAVTGDDARGSEVEGAEGPRGGEEEEGEKKSSAVTLPYVAQDNLELLTVDLVERCLDSTYRGGDLLGQHPDTGEDIRIRMGRYGPFLECGGIQAAASAHVSTANKKDPTDLSLPSQPTPTDLLQQRG-GGGQELGASSPDGEAAGRGPHPXXXXXXSG--NDTVVYSAEDVIAFGLGANATENGXXXXXXXXXX-DGGVGTWYSAVSLERAVGLLSLPRVVCESHPTEGGAIEAGVGRFGVWVRHKDSYKNVPAGIDVLDVDEALAVRLTDEMIQ 770
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BLAST of mRNA_Ecto-sp13_S_contig14816.3673.1 vs. uniprot
Match: D8LDU2_ECTSI (DNA topoisomerase (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDU2_ECTSI)

HSP 1 Score: 426 bits (1095), Expect = 1.350e-133
Identity = 236/287 (82.23%), Postives = 241/287 (83.97%), Query Frame = 2 
Query:   65 RRRPRGHQSLDDRCSILVGPYGGYLIPEASSGAVTGNDAVSSEVQDAEGRGGGEEGEGERKSSAVTLPYVAQDNLELLTVDLVERCLDSTYGGGDLLGQHPDTGEDIRIRMGRYGPFLECGGIQAAASAHVSTANKKDPTDLSLPSQPTPTELLQQRGEGGGQELGSASSDGETAGRGSHPXXXXXXXXXXNDTVVYSAEDVIAFGLGANATEDGXXXXXXXXXXXDRGVGTWYSAVSLERAVGLLSLPRVVCESHPTEGGAIEVGVGRFGVWIRHKDSYKNVPAGI 925
            R R  G +SLDDRCSILVGPYGGYLIPEASSGAVTG+DA                      SSAVTLPYVAQDNLELLTVDLVERCLDSTY GGDLLGQHPDTGEDIRIRMGRYGPFLECGGIQAAASAHVSTANKKDPTDLSLPSQPTPT+LLQ RG GGGQE GS+S DGETAGRG HP          NDTVVYSAEDVIAFGLGANATEDG  XXXXXXXXXD GVGTWYSAVSLERAVGLLSLPRVVCESHPTEGGAIE GVGRFGVW+RHKDSYKNVPAGI
Sbjct:  767 RARLPGLESLDDRCSILVGPYGGYLIPEASSGAVTGDDAGXXXXXXXXXXXXXXXXXXXXXSSAVTLPYVAQDNLELLTVDLVERCLDSTYRGGDLLGQHPDTGEDIRIRMGRYGPFLECGGIQAAASAHVSTANKKDPTDLSLPSQPTPTDLLQHRG-GGGQEPGSSSPDGETAGRGPHPPAAAVASG--NDTVVYSAEDVIAFGLGANATEDGGGXXXXXXXXXDGGVGTWYSAVSLERAVGLLSLPRVVCESHPTEGGAIEAGVGRFGVWVRHKDSYKNVPAGI 1050
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BLAST of mRNA_Ecto-sp13_S_contig14816.3673.1 vs. uniprot
Match: A0A6H5K435_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K435_9PHAE)

HSP 1 Score: 362 bits (930), Expect = 1.010e-118
Identity = 216/249 (86.75%), Postives = 222/249 (89.16%), Query Frame = 2 
Query: 1112 KTKSNPEPQEISLDEAIALVLEKRSKDGPAAAKARVRARGKKVXXXXXXXXXXXXXXXXXXXXXXXXVVKSKNLGGGEKRPLSGFFRFCKESRELHTAATATAGTEAAGVNLNAETLSARWKGLGDEERGRFNAAAAAALEQWKADNAKSESGRSXXXXXXXXXXXXKNRVPQPKNAYILFSSERRPGLKEEVGGKGLTAVEMTKKLAQEWRELEGSSVREEYARRAALLREAWLKEKEEVASAERVAP 1858
            KTKSNPEP+EISLDEAIALVLEKRSKDGPAAAKAR  ARGK V         XXXXXXXXXXXXXXX VK+KNLGGG+KRPLSGFFRFCKESRELHTAATATAG EAAGVNLNAETLSARWKGLGDE+RGRFNAAAAAALEQWKADNAK+ESGRS            KNRVPQPKNAYILFSSERRPGLKEEVGG+GLTAVEMTKKLAQEWRELEGSSVREEYARRAALLREAWLKEKEE ASAERVAP
Sbjct:    5 KTKSNPEPEEISLDEAIALVLEKRSKDGPAAAKAR--ARGKTVSKGGTAASTXXXXXXXXXXXXXXXXVKNKNLGGGDKRPLSGFFRFCKESRELHTAATATAGAEAAGVNLNAETLSARWKGLGDEDRGRFNAAAAAALEQWKADNAKAESGRSSGSSSGGRKGSGKNRVPQPKNAYILFSSERRPGLKEEVGGEGLTAVEMTKKLAQEWRELEGSSVREEYARRAALLREAWLKEKEEAASAERVAP 251
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BLAST of mRNA_Ecto-sp13_S_contig14816.3673.1 vs. uniprot
Match: A0A090N6Z9_AFIFE (DNA topoisomerase 1 n=2 Tax=Afipia felis TaxID=1035 RepID=A0A090N6Z9_AFIFE)

HSP 1 Score: 79.7 bits (195), Expect = 5.850e-12
Identity = 54/148 (36.49%), Postives = 80/148 (54.05%), Query Frame = 2 
Query:  773 VSLERAVGLLSLPRVVCESHPTEGGAIEVGVGRFGVWIRHKDSYKNVPAGIDVLDVDEALAVRLTDEMIQRNKDR-----PTIEIGMLD--GEKVFIKYAKYGRCISCDGTVVMLPPQYRKTKSNPEPQEISLDEAIALVLEKRSKDG 1195
            V L+ A+ LLSLPR V   HP +G  I  G+GRFG ++RH  +Y ++ AG DV ++    AV L  E I +   R     P  E+G     G K+ +K  +YG  ++ DG    +P        + EP +I+L+EAIAL+  + +K G
Sbjct:  317 VELDLALKLLSLPRDV-GPHPEDGEIITAGIGRFGPFVRHGKTYASLEAGDDVYNIGLNRAVTLIAEKIAKGPSRRFGADPGKEVGDYPARGGKIMLKKGRYGAYVTIDGINATIP-------DDKEPDQITLEEAIALIEARATKTG 456
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BLAST of mRNA_Ecto-sp13_S_contig14816.3673.1 vs. uniprot
Match: A0A1J5R6B9_9ZZZZ (DNA topoisomerase n=1 Tax=mine drainage metagenome TaxID=410659 RepID=A0A1J5R6B9_9ZZZZ)

HSP 1 Score: 80.1 bits (196), Expect = 6.890e-12
Identity = 60/152 (39.47%), Postives = 81/152 (53.29%), Query Frame = 2 
Query:  767 SAVSLERAVGLLSLPRVVCESHPTEGGAIEVGVGRFGVWIRHKDSYKNVPAGIDVLDVDEALAVRLTDEMIQRNKDRPTIEIGM--LDGEKVFIKYAKYGRCISCDGTVVMLPPQYRKTKSNPEPQEISLDEAIALVLEKRSKDGPAAAKAR 1216
            +AV+LE A+ LLSLPR +  +HP  G  I  GVGRFG +++H D+YK++    DVL V    AV L   + Q     P  E+G    DG+ V +   ++G  +S  G    LP             EISL+EA+AL+  K  K G AA KAR
Sbjct:  703 AAVTLEVALKLLSLPRQI-GTHPESGLMISAGVGRFGPYLKHGDAYKSLGREDDVLSVGMNRAVEL---LAQVKPKVPARELGAHPADGKPVTLSSGRFGPYVSHGGINANLPRGR---------DEISLEEALALLAAKAEKQGKAAPKAR 841
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BLAST of mRNA_Ecto-sp13_S_contig14816.3673.1 vs. uniprot
Match: A0A835Z3T3_9STRA (DNA topoisomerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3T3_9STRA)

HSP 1 Score: 79.3 bits (194), Expect = 1.470e-11
Identity = 45/118 (38.14%), Postives = 69/118 (58.47%), Query Frame = 2 
Query:   92 LDDRCSILVGPYGGYL--IPEASSGAVTGNDAVSSEVQDAEGRGGGEEGEGERKSSAVTLPYVAQDNLELLTVDLVERCLDSTYGGGDLLGQHPDTGEDIRIRMGRYGPFLECGGIQA 439
            LDD+  I  GP+G Y+  +    +G  TG  AV   +      G  EEGE E K +   LP   Q ++EL++V+ ++ CL  +  GG  LG HP TGE +R+++GRYGP++E G +++
Sbjct: 1043 LDDQVGIFFGPWGAYIETLQPVKAGGDTG--AVDGIIAADGSDGSVEEGEKE-KLNKCKLPQDLQADVELISVEAIQHCLRLSEQGGLALGDHPVTGETVRLKIGRYGPYVEAGSVRS 1157
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BLAST of mRNA_Ecto-sp13_S_contig14816.3673.1 vs. uniprot
Match: A0A369TBQ9_9PROT (DNA topoisomerase 1 n=1 Tax=Ferruginivarius sediminum TaxID=2661937 RepID=A0A369TBQ9_9PROT)

HSP 1 Score: 77.4 bits (189), Expect = 4.820e-11
Identity = 47/151 (31.13%), Postives = 80/151 (52.98%), Query Frame = 2 
Query:  767 SAVSLERAVGLLSLPRVVCESHPTEGGAIEVGVGRFGVWIRHKDSYKNVPAGIDVLDVDEALAVRLTDEMIQRNKDRPTIEIGM--LDGEKVFIKYAKYGRCISCDGTVVMLPPQYRKTKSNPEPQEISLDEAIALVLEKRSKDGPAAAKA 1213
            +AV L+ A+ LLSLPR +C+ HP +G  ++ G+GR+G +I+H  +Y ++P   DVL V +  A+ +  E  ++ + R   EIG    +G  +     +YG  +    T   LP          EP+ ++L +A+ L+ E+  K G    K+
Sbjct:  702 TAVDLQTALALLSLPREICK-HPEDGEPVQAGIGRYGPYIKHGSAYVSLPDDDDVLTVGQNRALTILAESPKKRRARQQTEIGEHPREGGPITASVGRYGPYVKHGRTFASLP-------KGTEPESVTLQQAVDLLDEQAKKKGNGKTKS 844
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BLAST of mRNA_Ecto-sp13_S_contig14816.3673.1 vs. uniprot
Match: A0A836RAB3_9PLAN (DNA topoisomerase I n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A836RAB3_9PLAN)

HSP 1 Score: 73.2 bits (178), Expect = 1.030e-10
Identity = 86/292 (29.45%), Postives = 127/292 (43.49%), Query Frame = 2 
Query:  380 DIRIRMGRYGPFLECGGIQAAASAHVSTANKKDPTDLSLPSQPTPTELLQQRGEGGGQELGSASSDGETAGRGSHPXXXXXXXXXXNDTVVYSAEDVIAFG----LGANATEDGXXXXXXXXXXXDRGVGTWYSAVSLERAVGLLSLPRVVCESHPTEGGAIEVGVGRFGVWIRHKDSYKNVPAGIDVLDVDEALAVRLTDEMIQRNKDRPTIEIGML--DGEKVFIKYAKYGRCISCDGTVVMLPPQYRKTKSNPEPQEISLDEAIALVLEKRSKDGPAAAKARVRARGKK 1237
            D +IR+GRYGP+LE             TA        SLP    P +L  +  E    EL     DG  +  G HP           D  VY  E    FG    LG +ATE+                      ++LE+A+ LL+LPR + E HP  G  ++ G+GR+G ++ H   YK++    DVL +D   AV L  +   R    P  E+G    DG+ V I   +YG  +   G +    P+ R         +++L+EA+A + EK +K   + ++ R  AR +K
Sbjct:    5 DAKIRVGRYGPYLE-----KEVDGETLTA--------SLPEDLAPADLTNELAE----ELLRKKKDGPRS-LGVHPQ---------EDLPVYVQEG--PFGPYVQLG-DATEENPKPKRVSLPPNLNP-----DTLTLEQAIALLNLPRTLGE-HPETGKVVKAGIGRYGPYVSHDGKYKSLGKHQDVLTIDLNTAVELLKQ--PRGSRTPIRELGPHPEDGQPVAIFDGRYGPYVK-HGKINATIPKDRDV------DQVTLEEAVAWLAEKSAKKSRSPSRRRSVARRRK 251
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BLAST of mRNA_Ecto-sp13_S_contig14816.3673.1 vs. uniprot
Match: A0A1Q3VYX4_9BRAD (DNA topoisomerase 1 n=1 Tax=Afipia sp. 64-13 TaxID=1895701 RepID=A0A1Q3VYX4_9BRAD)

HSP 1 Score: 75.5 bits (184), Expect = 1.940e-10
Identity = 53/148 (35.81%), Postives = 76/148 (51.35%), Query Frame = 2 
Query:  773 VSLERAVGLLSLPRVVCESHPTEGGAIEVGVGRFGVWIRHKDSYKNVPAGIDVLDVDEALAVRLTDEMIQRNKDR-----PTIEIGMLD--GEKVFIKYAKYGRCISCDGTVVMLPPQYRKTKSNPEPQEISLDEAIALVLEKRSKDG 1195
            V LE A+ LLSLPR V   HP +G  I  G+GRFG ++RH  +Y ++ AG DV  +    AV L  E I +   R     P   +G     G  + +K  +YG  ++ DG    +P          +P+ I+L EAIAL+ E+ +K G
Sbjct:  698 VELELAIKLLSLPRDV-GPHPEDGEIITAGIGRFGPFVRHGKTYASLEAGDDVYAIGLNRAVTLIAEKIAKGPGRRFGADPGKPVGDYPARGGAIMLKKGRYGAYVTIDGINATIPDSM-------DPENITLQEAIALIEERAAKGG 837
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BLAST of mRNA_Ecto-sp13_S_contig14816.3673.1 vs. uniprot
Match: UPI001BACB633 (type I DNA topoisomerase n=1 Tax=Caulobacter sp. S6 TaxID=2823693 RepID=UPI001BACB633)

HSP 1 Score: 74.7 bits (182), Expect = 3.290e-10
Identity = 56/161 (34.78%), Postives = 85/161 (52.80%), Query Frame = 2 
Query:  767 SAVSLERAVGLLSLPRVVCESHPTEGGAIEVGVGRFGVWIRHKDSYKNVPAGIDVLDVDEALAVRLTDEMIQ------RNKDRPTI-EIGM--LDGEKVFIKYAKYGRCISCDGTVVMLPPQYRKTKSNPEPQEISLDEAIALVLEKRSKDG---PAAAKA 1213
            + + LE+A+ LLSLPR V  +HP +GG I  G+GR+G +++H  +Y N+P   +V +V    AV +  E         R      + E+G    DGE V I   ++G  I   GT   +P          +PQE++L+EA+AL+ E+ +K G   PA  KA
Sbjct:  689 AGMDLEKALRLLSLPREV-GAHPDDGGMILAGIGRYGPYVQHNGTYANLPTADEVFEVGLNRAVTVLAEKRAGGGRGARGAGAAALKELGAHPADGEPVKILAGRFGPYIKHGGTNANVP-------RGKDPQELTLEEAVALLAEREAKGGGKKPAKGKA 841
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14816.3673.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KCV2_9PHAE1.660e-16089.22TOP1Ac domain-containing protein n=1 Tax=Ectocarpu... [more]
D8LDU2_ECTSI1.350e-13382.23DNA topoisomerase (Fragment) n=1 Tax=Ectocarpus si... [more]
A0A6H5K435_9PHAE1.010e-11886.75Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A090N6Z9_AFIFE5.850e-1236.49DNA topoisomerase 1 n=2 Tax=Afipia felis TaxID=103... [more]
A0A1J5R6B9_9ZZZZ6.890e-1239.47DNA topoisomerase n=1 Tax=mine drainage metagenome... [more]
A0A835Z3T3_9STRA1.470e-1138.14DNA topoisomerase n=1 Tax=Tribonema minus TaxID=30... [more]
A0A369TBQ9_9PROT4.820e-1131.13DNA topoisomerase 1 n=1 Tax=Ferruginivarius sedimi... [more]
A0A836RAB3_9PLAN1.030e-1029.45DNA topoisomerase I n=1 Tax=Planctomycetaceae bact... [more]
A0A1Q3VYX4_9BRAD1.940e-1035.81DNA topoisomerase 1 n=1 Tax=Afipia sp. 64-13 TaxID... [more]
UPI001BACB6333.290e-1034.78type I DNA topoisomerase n=1 Tax=Caulobacter sp. S... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig14816contigEcto-sp13_S_contig14816:2..3845 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score283.1
Seed ortholog evalue2.5e-73
Seed eggNOG ortholog2880.D8LDU2
Model size1860
KEGG koko:K03168
Hectar predicted targeting categoryother localisation
Exons4
EggNOG free text desc.DNA topoisomerase type I activity
EggNOG OGsCOG0550@1,KOG1956@2759
EC5.99.1.2
Cds size1464
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03032,ko03400
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462790.641325-UTR-Ecto-sp13_S_contig14816:1..3831681462790.641325-UTR-Ecto-sp13_S_contig14816:1..383Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig14816 2..383 +
1681462790.6509905-UTR-Ecto-sp13_S_contig14816:756..7681681462790.6509905-UTR-Ecto-sp13_S_contig14816:756..768Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig14816 757..768 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462790.6589355-CDS-Ecto-sp13_S_contig14816:768..13561681462790.6589355-CDS-Ecto-sp13_S_contig14816:768..1356Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14816 769..1356 +
1681462790.666632-CDS-Ecto-sp13_S_contig14816:1943..20541681462790.666632-CDS-Ecto-sp13_S_contig14816:1943..2054Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14816 1944..2054 +
1681462790.6745994-CDS-Ecto-sp13_S_contig14816:3080..38451681462790.6745994-CDS-Ecto-sp13_S_contig14816:3080..3845Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14816 3081..3845 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig14816.3673.1prot_Ecto-sp13_S_contig14816.3673.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig14816 769..3845 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig14816.3673.1

>prot_Ecto-sp13_S_contig14816.3673.1 ID=prot_Ecto-sp13_S_contig14816.3673.1|Name=mRNA_Ecto-sp13_S_contig14816.3673.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=488bp
MGRYGPFLECGGIQAAASAHVSTANKKDPTDLSLPSQPTPTELLQQRGEG
GGQELGSASSDGETAGRGSHPPAAAAAAASGNDTVVYSAEDVIAFGLGAN
ATEDGGGGGGGGNGGGDRGVGTWYSAVSLERAVGLLSLPRVVCESHPTEG
GAIEVGVGRFGVWIRHKDSYKNVPAGIDVLDVDEALAVRLTDEMIQRNKD
RPTIEIGMLDGEKVFIKYAKYGRCISCDGTVVMLPPQYRKTKSNPEPQEI
SLDEAIALVLEKRSKDGPAAAKARVRARGKKVSKGGTAASTASATGTGQR
KKKGGRVVKSKNLGGGEKRPLSGFFRFCKESRELHTAATATAGTEAAGVN
LNAETLSARWKGLGDEERGRFNAAAAAALEQWKADNAKSESGRSSGSSSG
GGKGSGKNRVPQPKNAYILFSSERRPGLKEEVGGKGLTAVEMTKKLAQEW
RELEGSSVREEYARRAALLREAWLKEKEEVASAERVAP
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mRNA from alignment at Ecto-sp13_S_contig14816:2..3845+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig14816.3673.1 ID=mRNA_Ecto-sp13_S_contig14816.3673.1|Name=mRNA_Ecto-sp13_S_contig14816.3673.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3844bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14816:2..3845+ (Ectocarpus species13 EcNAP12_S_4_19m)
CCTTTCGTGTTTCCTGTGAATCACTCATGTGCCGTATGTATATGTATATT
TGTTTTCTTTCGCGCGCCGCCGTCCGCGGGGACACCAGAGCCTGGACGAT
CGCTGCTCCATCTTGGTGGGGCCGTACGGAGGCTACCTGATACCCGAGGC
CTCCAGCGGTGCGGTAACCGGGAACGACGCCGTAAGTAGCGAGGTGCAAG
ACGCCGAGGGGCGGGGGGGCGGCGAGGAGGGGGAAGGGGAGAGGAAGTCT
TCCGCCGTGACGCTGCCGTACGTTGCGCAGGACAACCTTGAGCTGCTTAC
GGTGGACTTGGTGGAGAGGTGCCTGGACTCGACGTACGGGGGAGGGGACC
TCTTGGGGCAGCACCCGGACACGGGAGAAGATGTGAGAGTTTTCTGTTTT
TCGTCCTTGTTTTTTGGAAGTTGTGGCGATTTTGGATAGAGGCACGGTTT
GAGTGATTGGACAGTTGCTAGGTCGTGAATCTTGTTCGGTGCGGTCCGGT
GCGTGAGATTACGCAGTAAAGGCCAGCGAACGAGAGAGAGACAGAGGGAA
AGACGAACAGACAGAGAGACACAAAGAGAGAGGGGGGGCGGGAGAGGGAA
AGACAGAAAAACAGAGGGAGACAGAGTAACAGAAGGACAAAGAACCCATT
CTACCACGGGTATTTACTCTAACGCCGCCAGTACCGTCCCTCCCCCGCTT
CCCTTCTTTTCACACCGCGCGCGGTCGACCCCTCGCCCCCCTGTCTTGCC
GTCAGATCCGAATACGCATGGGCCGCTACGGCCCGTTCCTCGAGTGCGGC
GGGATCCAGGCGGCGGCGTCCGCGCACGTGAGCACCGCCAACAAGAAGGA
CCCGACGGACCTCAGCCTGCCGTCTCAACCCACTCCGACAGAGCTGCTTC
AGCAGAGGGGGGAGGGAGGAGGACAAGAGCTCGGCTCTGCCTCCTCAGAC
GGGGAGACCGCTGGAAGAGGATCTCATCCTCCCGCGGCCGCTGCCGCCGC
CGCTAGCGGTAACGACACCGTAGTCTATTCGGCCGAAGACGTGATCGCCT
TTGGGCTGGGAGCTAACGCTACCGAGGACGGCGGCGGCGGCGGCGGCGGC
GGCAATGGCGGCGGCGACCGCGGGGTCGGGACGTGGTACTCGGCGGTGTC
GCTGGAGAGAGCGGTGGGGCTCCTGTCCCTGCCCAGGGTGGTGTGCGAGT
CGCACCCCACGGAGGGGGGAGCGATCGAGGTCGGCGTGGGGCGGTTCGGG
GTGTGGATCAGGCACAAGGACTCGTACAAGAACGTGCCCGCCGGGATCGA
CGTGCTCGACGTGGACGAGGCGCTCGCCGTGCGGCTGACGGACGAGATGA
TCCAGGTGTGAAGGCACGTGCGCTGTAGGTACCCGCCGGCGCTGCGGCTG
TAACGCAAAGCGGGGTATCAGCTGGCGGTATGGCTGACTGATGAGATGAT
TCGGGTGAAGGAAGGAACAAAAACGAGCGAACGAACGAGCTCGGGCGGTA
GGTATAGCCGCCGGCGCTGTGGTCGTTAAGATACAGCGGGGTGTCAGCTG
GCGGTGCCGCTGACTGATGAGATGATGGTTCGGGTGAAGGAACGATCGTG
CGCGGTGGGTAGCCGGCGGGGCTTCGACCGTAAATGAATGCCGGGTACAA
TAGTGGTTGTTGTGAAGGCGGTGGTTGGCCGATGATATACTGCTTGCCGT
TTGGTTGGCCGCCGGAGTGAACATGAGGAGCGGTGGTGTGGAGGTGCAGA
GAGAGGGCTTGGGGCCTTACGTGGCGAGAGGTGTTGCTTGCTCCCCCCCT
TGCCCTGTTTCCCACGCAGCAGCAACAGCCGCGGCGGAATTTTTCAGGCT
CGCCCCATCCTTGTCAACTACTCACGCAGTAGTGTCATGTAAAATCTTGA
AGAGTCTCACATGTCATGTGCTCCCCATTCCTTCGCTCGCAGAGAAACAA
GGATCGGCCGACGATAGAGATTGGGATGCTAGACGGAGAGAAGGTGTTCA
TCAAGTACGCCAAGTACGGGAGGTGCATTTCGTGTGACGGCACGGTGGTT
ATGGTGAGTTTTTCTCCCGCGGACATTTTCACTGCTGCACCTCTTACCCA
CTGAGAGGTCCTGACTGGTACAGCAACGTATCCCGCTGCTGGATTTCCTT
GACGATGAGGCGCGCGGCGCGCAGGCGCACACACACATGTATCGCCGTGC
TCCACCGCGTCGCGTGCTGTCCGTGGTACATGCTAACACGCAACCGTGTT
TTGCTCACGGCTGCATTGTTGCGGGTGGTTTGCAAAGAAAGTCCTCCAGT
CAAAAGAAGCACACGCTACAGCATACAAGTATGCACGGCCATTGGCCTGT
GCGCGCTCTTTGTCGTGGCGGAAACGTCAAGAGCGAGAAGGGAGATGACT
CTGGGCACAAGGGGCTCTCTCAGTGGATTCCGTGGAACTCACCAGGCTTG
GCGTCAATCTTGGTCGCGAGGGGAGGGGGGGTTCTGTTGTAAAGGATTTA
GTGTGGTGTAATTCAACCCATATTACTTAGTTATGTGGGATTTAGTGTGG
TGTATTGAAACATTTGTAACACCAGAATATGACGTGGTGTATAGGTTTTT
CTATGTCCATACTGCGGTATTCTAAACCATGGCCCTTGCGTTGCATTAAG
AATCCATATACAGTCGTATGGCCGGGGTGTATTGGTTTATGTAAGGCCAT
ACGAAATCTAATAAACATAACATCATGTGTAGGAACTGTACTAAATCCTT
TATGACCAAGCATAAATAGGATCAAGTACACCATCCTAAATCCTATGCAA
TAGACCCTCTCCCCCCCCTTTCGAGGACGCGTGGTCAATGGTCTAACCGC
TACATCATGCAAAACATAAGAGTACGCCCCCCCCCTCGCGACCAAGATTG
ACGCGTAGCCTGGGGGGTTTTCAATGTTTCCACTGGGAAGGCCCCTTGCT
GGGCGATGTCTCTGTACGGGGAGTAGCAAACGGCGGTGCTCTGCTTCGAA
GGGGTCACATGCATGCGTGATCACTTGGTCGAACGATCAAGAAACACAAT
ATTCTCCTACCACCCCCTTCCCCCCCCAGCTGCCCCCGCAGTACAGGAAG
ACGAAGAGCAACCCGGAGCCGCAGGAGATCTCTCTCGACGAGGCGATAGC
CCTCGTTTTGGAGAAGCGCTCCAAGGACGGCCCGGCCGCGGCAAAGGCAA
GGGTAAGGGCCAGGGGAAAGAAGGTGAGCAAGGGTGGCACCGCTGCCTCC
ACCGCCTCCGCCACGGGTACCGGGCAGAGGAAGAAGAAAGGAGGGCGGGT
GGTGAAGAGCAAGAACTTGGGGGGCGGCGAGAAGAGACCGCTATCGGGGT
TCTTCAGGTTCTGCAAGGAAAGCAGGGAGTTGCACACGGCGGCGACGGCG
ACGGCGGGGACGGAAGCGGCCGGTGTAAATCTCAACGCCGAGACCCTCTC
GGCGAGGTGGAAGGGGCTGGGTGACGAAGAGCGCGGGAGGTTCAACGCGG
CGGCGGCGGCGGCGCTCGAGCAGTGGAAGGCGGACAACGCAAAATCCGAG
AGCGGGAGAAGCAGCGGCAGCAGCAGCGGCGGGGGTAAGGGCAGCGGCAA
GAACAGAGTGCCCCAGCCGAAGAACGCGTACATTCTCTTCTCTTCCGAGC
GGAGGCCCGGGCTGAAGGAGGAGGTAGGCGGGAAAGGGCTCACGGCGGTG
GAGATGACCAAGAAGCTAGCGCAGGAGTGGCGAGAGCTCGAGGGCAGCAG
CGTCCGAGAGGAGTACGCGCGGCGCGCCGCGCTGCTGAGGGAGGCGTGGC
TCAAGGAGAAGGAGGAGGTCGCCTCCGCGGAGAGGGTGGCCCCG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig14816:2..3845+

>mRNA_Ecto-sp13_S_contig14816.3673.1 ID=mRNA_Ecto-sp13_S_contig14816.3673.1|Name=mRNA_Ecto-sp13_S_contig14816.3673.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1464bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14816:2..3845+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGGCCGCTACGGCCCGTTCCTCGAGTGCGGCGGGATCCAGGCGGCGGC
GTCCGCGCACGTGAGCACCGCCAACAAGAAGGACCCGACGGACCTCAGCC
TGCCGTCTCAACCCACTCCGACAGAGCTGCTTCAGCAGAGGGGGGAGGGA
GGAGGACAAGAGCTCGGCTCTGCCTCCTCAGACGGGGAGACCGCTGGAAG
AGGATCTCATCCTCCCGCGGCCGCTGCCGCCGCCGCTAGCGGTAACGACA
CCGTAGTCTATTCGGCCGAAGACGTGATCGCCTTTGGGCTGGGAGCTAAC
GCTACCGAGGACGGCGGCGGCGGCGGCGGCGGCGGCAATGGCGGCGGCGA
CCGCGGGGTCGGGACGTGGTACTCGGCGGTGTCGCTGGAGAGAGCGGTGG
GGCTCCTGTCCCTGCCCAGGGTGGTGTGCGAGTCGCACCCCACGGAGGGG
GGAGCGATCGAGGTCGGCGTGGGGCGGTTCGGGGTGTGGATCAGGCACAA
GGACTCGTACAAGAACGTGCCCGCCGGGATCGACGTGCTCGACGTGGACG
AGGCGCTCGCCGTGCGGCTGACGGACGAGATGATCCAGAGAAACAAGGAT
CGGCCGACGATAGAGATTGGGATGCTAGACGGAGAGAAGGTGTTCATCAA
GTACGCCAAGTACGGGAGGTGCATTTCGTGTGACGGCACGGTGGTTATGC
TGCCCCCGCAGTACAGGAAGACGAAGAGCAACCCGGAGCCGCAGGAGATC
TCTCTCGACGAGGCGATAGCCCTCGTTTTGGAGAAGCGCTCCAAGGACGG
CCCGGCCGCGGCAAAGGCAAGGGTAAGGGCCAGGGGAAAGAAGGTGAGCA
AGGGTGGCACCGCTGCCTCCACCGCCTCCGCCACGGGTACCGGGCAGAGG
AAGAAGAAAGGAGGGCGGGTGGTGAAGAGCAAGAACTTGGGGGGCGGCGA
GAAGAGACCGCTATCGGGGTTCTTCAGGTTCTGCAAGGAAAGCAGGGAGT
TGCACACGGCGGCGACGGCGACGGCGGGGACGGAAGCGGCCGGTGTAAAT
CTCAACGCCGAGACCCTCTCGGCGAGGTGGAAGGGGCTGGGTGACGAAGA
GCGCGGGAGGTTCAACGCGGCGGCGGCGGCGGCGCTCGAGCAGTGGAAGG
CGGACAACGCAAAATCCGAGAGCGGGAGAAGCAGCGGCAGCAGCAGCGGC
GGGGGTAAGGGCAGCGGCAAGAACAGAGTGCCCCAGCCGAAGAACGCGTA
CATTCTCTTCTCTTCCGAGCGGAGGCCCGGGCTGAAGGAGGAGGTAGGCG
GGAAAGGGCTCACGGCGGTGGAGATGACCAAGAAGCTAGCGCAGGAGTGG
CGAGAGCTCGAGGGCAGCAGCGTCCGAGAGGAGTACGCGCGGCGCGCCGC
GCTGCTGAGGGAGGCGTGGCTCAAGGAGAAGGAGGAGGTCGCCTCCGCGG
AGAGGGTGGCCCCG
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