prot_Ecto-sp13_S_contig14802.3664.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp13_S_contig14802.3664.1
Unique Name	prot_Ecto-sp13_S_contig14802.3664.1
Type	polypeptide
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length	149

Homology

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BLAST of mRNA_Ecto-sp13_S_contig14802.3664.1 vs. uniprot
Match: A0A6H5KT10_9PHAE (DUF4440 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT10_9PHAE)

HSP 1 Score: 234 bits (598), Expect = 1.200e-72
Identity = 140/148 (94.59%), Postives = 143/148 (96.62%), Query Frame = 0

Query:    1 VGSATDVVVKTVKAVAEASVQTAPSSPVEDDEVTPEASPAFVCVPPAMQDSSCGTGYTAATAAADQKTWRDLNNRVSNLLLEEERSLRAKQIADLQHHANQLVELQKRAVAAKARAAERXXXXXXXXKIRAKREMELVKRAEKAKVGN 148
            VGSATDVVVKTVKAVAEASVQTAPSSPVE+DE TPE SPAFVCVPPAM DSSCGTGYTA TAAADQKTWRD NNRVSNLLLEEERSLRAKQIADLQHHA+QLVELQKRAVAAKARAAERXXXXXXXXK+RAKREMELVKRAEKAKVGN
Sbjct:  356 VGSATDVVVKTVKAVAEASVQTAPSSPVENDEFTPETSPAFVCVPPAMPDSSCGTGYTAVTAAADQKTWRDFNNRVSNLLLEEERSLRAKQIADLQHHADQLVELQKRAVAAKARAAERXXXXXXXXKVRAKREMELVKRAEKAKVGN 503

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BLAST of mRNA_Ecto-sp13_S_contig14802.3664.1 vs. uniprot
Match: D7FYA8_ECTSI (Similar to Uncharacterized protein conserved in bacteria with a cystatin-like fold n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYA8_ECTSI)

HSP 1 Score: 233 bits (594), Expect = 7.310e-72
Identity = 139/145 (95.86%), Postives = 144/145 (99.31%), Query Frame = 0

Query:    1 VGSATDVVVKTVKAVAEASVQTAPSSPVEDDEVTPEASPAFVCVPPAMQDSSCGTGYTAATAAADQKTWRDLNNRVSNLLLEEERSLRAKQIADLQHHANQLVELQKRAVAAKARAAERXXXXXXXXKIRAKREMELVKRAEKAK 145
            VGSATDVVVKTVKAVAEASVQTAPSSPVEDDEVTPEASPAFVCVPPAM DSSCGTGYTAAT+AADQKTW+DLNNRVSNLLLEEERSLRAKQIADLQHHA+QLVELQKRAVAAKARAAERXXXXXXXXK+RAKRE+ELVKRAEKAK
Sbjct:  377 VGSATDVVVKTVKAVAEASVQTAPSSPVEDDEVTPEASPAFVCVPPAMPDSSCGTGYTAATSAADQKTWKDLNNRVSNLLLEEERSLRAKQIADLQHHADQLVELQKRAVAAKARAAERXXXXXXXXKVRAKREVELVKRAEKAK 521

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig14802.3664.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig14802.3664.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5KT10_9PHAE	1.200e-72	94.59	DUF4440 domain-containing protein n=1 Tax=Ectocarp...	[more]
D7FYA8_ECTSI	7.310e-72	95.86	Similar to Uncharacterized protein conserved in ba...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 95..141

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig14802	contig	Ecto-sp13_S_contig14802:1669..3482 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig14802.3664.1	mRNA_Ecto-sp13_S_contig14802.3664.1	Ectocarpus species13 EcNAP12_S_4_19m	mRNA	Ecto-sp13_S_contig14802 1669..3482 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp13_S_contig14802.3664.1 ID=prot_Ecto-sp13_S_contig14802.3664.1|Name=mRNA_Ecto-sp13_S_contig14802.3664.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=149bp
VGSATDVVVKTVKAVAEASVQTAPSSPVEDDEVTPEASPAFVCVPPAMQD
SSCGTGYTAATAAADQKTWRDLNNRVSNLLLEEERSLRAKQIADLQHHAN
QLVELQKRAVAAKARAAERAVERAAERKIRAKREMELVKRAEKAKVGN*