mRNA_Ecto-sp13_S_contig14716.3608.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig14716.3608.1
Unique NamemRNA_Ecto-sp13_S_contig14716.3608.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig14716.3608.1 vs. uniprot
Match: D7G392_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G392_ECTSI)

HSP 1 Score: 1246 bits (3225), Expect = 0.000e+0
Identity = 720/881 (81.73%), Postives = 763/881 (86.61%), Query Frame = 1
Query:    1 MSSIVGAALPWVGEKVSDLLARQREASNNMVAGGSGRAGIVDADLTTATXXXXXXXXXXXXXXXXXXXXXSRRATQLKNGSNSRNRSGSNSGCISPVRRVRRRANASPIAGTSRHEANSNVAAGAAGRTNNDWAPQDKTPKRASVWEPENFQGGGGSSNTTGVPKKRRSTDALAGSNANGLPSPPPGNGNGTVPGTGVHWSGKSSDPTRSKAGDAAVAGGTRSLTSEDIISGKSGAGVGVSAEMRVGDGRARGPPSSTHDARVVPPAATSSRGGMIPSALGEGNAGIRERRKPSREEEAQRDVGNLTPYEVSVDVGEAESCPSSLTQQRAEEAGRRAQTERFLAPLPPVRAGGDGGRKADLTISNWPPRTDSVSGTGDARVVGGSGDNIVGSGYRNGNSSIACWKTSSASDSNSLASSAPVFSNGVLARRPCSSTGG---------EKNGGSENGGDGIAGAARSLRAVLRGRDAASREVGSSSCSSTNTHAKEDAERGVGGGRGAVSAAPEVAPRDGGRLAWCGDRGLLARPPATLQPRQHPFVRSSSLSYPASAKGLASAAGGGAHVAGSSSACDALTGRCSQRQSTAAAAACLGRLDFTAVNVEAAGAAYPSGGGRGSADRQGDVAWGGGVANXXXXXXXXXGRGAGGIPSGDQEARDGPESVTRESREVLVMESLEVGADDVATMSSSALSVTSREDEESDAEDVYMMVNDRYDPDYHPFAESLLDANSGDESSINMSMAIEHTNHHNEDVAEAKTTRMRTRAAAGEAYPTRKKTSSHATVLGDDSEECPRESSLASNGSDSGSLPDGDSGGHLSAGEEAPTTRGGGRKKKLKLNAARRRAKASAKAEQCNDMDSKPEPRVAKPRTRTVVEPLVPPQ 2616
            MSSIVGAALPWVGEKVSDLL RQREASNNMVAG SG+AG+VDAD+TTAT      XXXXXXXXXXXXX  SRRATQLKNGSN+ NRSGSNSGCI PVRRVR+RAN SP+AGTSRHEAN +VAAGAAGRTNND APQDKTPK  SVWEPENFQGGG +SNTTGVPKKRRSTDALAGSN NGLPSPPPGNGNG V G G+HWSGKSS+ T SK GDAAVAGGTRSLTSEDI+SG+SG GV VSAE RVG+GRARGPPSST DARVV PAA S+RGG  PSALGEGNAGIR++RK SREEE QRD+G+LTPY+  +D  EAESCPSSLTQQRAEEAGRRAQTERFLAPLPPV AGG    KADLTISNWPPRTDSVS TGDARVV GSG N VG+G+RNGNSS ACWKTSSAS SNSLASSAPV SNGVLA RP SSTG          EK+          +GAARSLRAVLRG+DAASR+V SSSCSSTNTHAKEDAERGVG G GAVSAAPEVAPRDGGRLAWCGDRGLLARPPATLQPRQHPFVRSSSLSYP SAKGLASAAG GAHVAGSSSACDAL+GRCSQRQSTAAAAACLGRLDFTAVNV+AAGAAYP+GGG G ADR+GD+AWGGGVAN         GRGA GI SGD+EA DGPES TRES EV VM  +EVGADDVATMSSSALSVTSREDEESD EDVYMMV+DRYDPDYHPFAESLLDANSGDESS++MS++I H NHHNED  +AK TRMR + AAGEAYPTR+KTSS ATVLGDDSEEC  ESS+A NGSD G+L  GDSGGHLS GEEAP TRGGGRKK LK  AARRR KASAKAEQCNDMDSKPEPRVAKPRTRTVVEPLVPPQ
Sbjct:    1 MSSIVGAALPWVGEKVSDLLGRQREASNNMVAGSSGKAGVVDADITTATAMRMGAXXXXXXXXXXXXXSISRRATQLKNGSNNSNRSGSNSGCILPVRRVRKRANTSPVAGTSRHEANIDVAAGAAGRTNNDCAPQDKTPKGTSVWEPENFQGGGVNSNTTGVPKKRRSTDALAGSNVNGLPSPPPGNGNGAVSGKGLHWSGKSSNLTHSKDGDAAVAGGTRSLTSEDIVSGRSGVGVRVSAETRVGEGRARGPPSSTLDARVVLPAARSTRGGTTPSALGEGNAGIRKKRKSSREEEGQRDLGHLTPYDAGMDASEAESCPSSLTQQRAEEAGRRAQTERFLAPLPPVGAGGXXXGKADLTISNWPPRTDSVSATGDARVVSGSGGNGVGNGHRNGNSSKACWKTSSASYSNSLASSAPVLSNGVLASRPFSSTGSKGRSFDDGEEKSDSXXXXXXXTSGAARSLRAVLRGQDAASRDVQSSSCSSTNTHAKEDAERGVGVGGGAVSAAPEVAPRDGGRLAWCGDRGLLARPPATLQPRQHPFVRSSSLSYPVSAKGLASAAGRGAHVAGSSSACDALSGRCSQRQSTAAAAACLGRLDFTAVNVDAAGAAYPTGGGGGGADRRGDLAWGGGVANGGSTAGEGHGRGAXGITSGDREAGDGPESRTRESGEVRVMGVVEVGADDVATMSSSALSVTSREDEESDTEDVYMMVDDRYDPDYHPFAESLLDANSGDESSVDMSVSIGHDNHHNEDAGKAKKTRMRAQVAAGEAYPTREKTSSQATVLGDDSEECAGESSIAPNGSDCGTLAGGDSGGHLSVGEEAPMTRGGGRKKTLKSKAARRRDKASAKAEQCNDMDSKPEPRVAKPRTRTVVEPLVPPQ 881          
BLAST of mRNA_Ecto-sp13_S_contig14716.3608.1 vs. uniprot
Match: A0A6H5LE14_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LE14_9PHAE)

HSP 1 Score: 1237 bits (3201), Expect = 0.000e+0
Identity = 708/880 (80.45%), Postives = 746/880 (84.77%), Query Frame = 1
Query:    1 MSSIVGAALPWVGEKVSDLLARQREASNNMVAGGSGRAGIVDADLTTATXXXXXXXXXXXXXXXXXXXXXSRRATQLKNGSNSRNRSGSNSGCISPVRRVRRRANASPIAGTSRHEANSNVAAGAAGRTNNDWAPQDKTPKRASVWEPENFQGGGGSSNTTGVPKKRRSTDALAGSNANGLPSPPPGNGNGTVPGTGVHWSGKSSDPTRSKAGDAAVAGGTRSLTSEDIISGKSGAGVGVSAEMRVGDGRARGPPSSTHDARVVPPAATSSRGGMIPSALGEGNAGIRERRKPSREEEAQRDVGNLTPYEVSVDVGEAESCPSSLTQQRAEEAGRRAQTERFLAPLPPVRAGGDGGRKADLTISNWPPRTDSVSGTGDARVVGGSGDNIVGSGYRNGNSSIACWKTSSASDSNSLASSAPVFSNGVLARRPCSSTG--------GEKNGGSENGGDGIAGAARSLRAVLRGRDAASREVGSSSCSSTNTHAKEDAERGVGGGRGAVSAAPEVAPRDGGRLAWCGDRGLLARPPATLQPRQHPFVRSSSLSYPASAKGLASAAGGGAHVAGSSSACDALTGRCSQRQSTAAAAACLGRLDFTAVNVEAAGAAYPSGGGRGSADRQGDVAWGGGVANXXXXXXXXXGRGAGGIPSGDQEARDGPESVTRESREVLVMESLEVGADDVATMSSSALSVTSREDEESDAEDVYMMVNDRYDPDYHPFAESLLDANSGDESSINMSMAIEHTNHHNEDVAEAKTTRMRTRAAAGEAYPTRKKTSSHATVLGDDSEECPRESSLASNGSDSGSLPDGDSGGHLSAGEEAPTTRGGGRKKKLKLNAARRRAKASAKAEQCNDMDSKPEPRVAKPRTRTVVEPLVPPQ 2616
            MSSIVGAALPWVGEKVSDLL RQREASNNMVAGGSGRAG+VDAD+TTAT                     SRRATQLKNGSNSRNRSGS+SGCI PVRRVR+RAN SPIAGTSRHEANSN AAGAAGRTNND APQDKTPK  SVWEPENFQGGGGSSNTTGV KKRRSTDALAGSNANGLPSPPPGNGN  V G G+HWSGKSS  T SK GDA VAGGTRSLTSEDI+SG SGAGV  SA  RVG+GRARGP SSTHDARVV PA  S+RGG IPSA+ EGNAGIR  RK SR EE QRDVGNLTPY+  +DV EAESCPSSLTQQRAEEAGRRAQTERFLAPLPPV AGG GG KADLTISNWPPRTDSV+GTGDA VV GSG N VG+GY NG S+ ACWKTSSAS SNSL SSAPVFSNGVLA RP SSTG        G+K+  SENGG G AGA RSLRAVLRGR+ ASREVGSSS SSTNTHA EDAERGVG G GAVSAAPEVAP++GGRLAWCGDRGLLARPPATLQPRQHPFVRSSSLSY AS KGLASAAG GAH AGSSSACDAL+GRCSQRQSTAAAAACLGRLDFTAVNV+AAGAAYPSG G G +DR+GDVAW G  AN         GRGAGGI SGD+EARDGPESVT+ES EV VMES+EVGADDVATMSSSALSVTSREDEESD EDVYMMV+DRYDPDYHPFAESLLDANSGDESSI+MS+AIEH NHHNED AEA+ TRMR R AA  AY TR+KTSS+ATVLGDDSEEC  ESSLA NGSD GS+ DGDSGGHLS GEEAP TRGGGRK+ LK  +ARR AKASA AEQCND D+KP+ RVAKPRTRTV+EPLVPPQ
Sbjct:    1 MSSIVGAALPWVGEKVSDLLGRQREASNNMVAGGSGRAGVVDADITTATAMRMGAPSSARVRTARAAASSSRRATQLKNGSNSRNRSGSSSGCILPVRRVRKRANTSPIAGTSRHEANSNGAAGAAGRTNNDCAPQDKTPKGTSVWEPENFQGGGGSSNTTGVLKKRRSTDALAGSNANGLPSPPPGNGNRAVSGMGLHWSGKSSISTHSKGGDADVAGGTRSLTSEDIVSGSSGAGVRASAATRVGEGRARGPSSSTHDARVVLPATRSTRGGTIPSAIAEGNAGIRNNRKSSRAEEGQRDVGNLTPYDAQMDVIEAESCPSSLTQQRAEEAGRRAQTERFLAPLPPVGAGGVGGGKADLTISNWPPRTDSVNGTGDAHVVSGSGGNGVGNGYTNGKSNRACWKTSSASYSNSLDSSAPVFSNGVLAPRPFSSTGKGRSFDGSGKKSDRSENGGGGAAGAPRSLRAVLRGRNVASREVGSSSGSSTNTHAXEDAERGVGVGGGAVSAAPEVAPKNGGRLAWCGDRGLLARPPATLQPRQHPFVRSSSLSYAASTKGLASAAGRGAHAAGSSSACDALSGRCSQRQSTAAAAACLGRLDFTAVNVDAAGAAYPSGCGGGGSDRRGDVAWSGRFANGGSTAGEGHGRGAGGITSGDREARDGPESVTQESGEVRVMESVEVGADDVATMSSSALSVTSREDEESDTEDVYMMVDDRYDPDYHPFAESLLDANSGDESSIHMSVAIEHDNHHNEDAAEARKTRMRARVAAEGAYRTREKTSSYATVLGDDSEECAGESSLAPNGSDCGSIADGDSGGHLSVGEEAPATRGGGRKETLKSKSARRWAKASAMAEQCNDTDNKPDLRVAKPRTRTVMEPLVPPQ 880          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14716.3608.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G392_ECTSI0.000e+081.73Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5LE14_9PHAE0.000e+080.45Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig14716contigEcto-sp13_S_contig14716:1..3029 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Model size2616
Hectar predicted targeting categoryother localisation
Exons2
Ec32 ortholog descriptionhypothetical protein
Ec32 orthologEc-03_004990.1
Cds size2616
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462785.4548037-CDS-Ecto-sp13_S_contig14716:0..16651681462785.4548037-CDS-Ecto-sp13_S_contig14716:0..1665Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14716 1..1665 -
1681462785.4643757-CDS-Ecto-sp13_S_contig14716:2078..30291681462785.4643757-CDS-Ecto-sp13_S_contig14716:2078..3029Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14716 2079..3029 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig14716.3608.1prot_Ecto-sp13_S_contig14716.3608.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig14716 1..3029 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig14716.3608.1

>prot_Ecto-sp13_S_contig14716.3608.1 ID=prot_Ecto-sp13_S_contig14716.3608.1|Name=mRNA_Ecto-sp13_S_contig14716.3608.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=872bp
MSSIVGAALPWVGEKVSDLLARQREASNNMVAGGSGRAGIVDADLTTATA
MRMGASSSARARAARAAASGSRRATQLKNGSNSRNRSGSNSGCISPVRRV
RRRANASPIAGTSRHEANSNVAAGAAGRTNNDWAPQDKTPKRASVWEPEN
FQGGGGSSNTTGVPKKRRSTDALAGSNANGLPSPPPGNGNGTVPGTGVHW
SGKSSDPTRSKAGDAAVAGGTRSLTSEDIISGKSGAGVGVSAEMRVGDGR
ARGPPSSTHDARVVPPAATSSRGGMIPSALGEGNAGIRERRKPSREEEAQ
RDVGNLTPYEVSVDVGEAESCPSSLTQQRAEEAGRRAQTERFLAPLPPVR
AGGDGGRKADLTISNWPPRTDSVSGTGDARVVGGSGDNIVGSGYRNGNSS
IACWKTSSASDSNSLASSAPVFSNGVLARRPCSSTGGEKNGGSENGGDGI
AGAARSLRAVLRGRDAASREVGSSSCSSTNTHAKEDAERGVGGGRGAVSA
APEVAPRDGGRLAWCGDRGLLARPPATLQPRQHPFVRSSSLSYPASAKGL
ASAAGGGAHVAGSSSACDALTGRCSQRQSTAAAAACLGRLDFTAVNVEAA
GAAYPSGGGRGSADRQGDVAWGGGVANGGSAAGEGHGRGAGGIPSGDQEA
RDGPESVTRESREVLVMESLEVGADDVATMSSSALSVTSREDEESDAEDV
YMMVNDRYDPDYHPFAESLLDANSGDESSINMSMAIEHTNHHNEDVAEAK
TTRMRTRAAAGEAYPTRKKTSSHATVLGDDSEECPRESSLASNGSDSGSL
PDGDSGGHLSAGEEAPTTRGGGRKKKLKLNAARRRAKASAKAEQCNDMDS
KPEPRVAKPRTRTVVEPLVPPQ
back to top

mRNA from alignment at Ecto-sp13_S_contig14716:1..3029-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig14716.3608.1 ID=mRNA_Ecto-sp13_S_contig14716.3608.1|Name=mRNA_Ecto-sp13_S_contig14716.3608.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3029bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14716:1..3029- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGAGCTCAATTGTCGGAGCGGCACTACCCTGGGTTGGAGAAAAGGTGTC TGACTTGCTGGCTCGTCAAAGAGAGGCGAGCAACAACATGGTAGCGGGCG GCAGCGGCAGGGCTGGCATCGTCGATGCCGATCTCACTACGGCGACTGCG ATGAGGATGGGTGCTTCTTCATCGGCTCGAGCGCGCGCCGCGCGAGCTGC TGCGTCCGGTAGCAGAAGGGCAACGCAACTCAAGAACGGCAGCAACAGCA GGAATCGCAGCGGTAGCAATAGTGGCTGTATTTCCCCTGTCCGACGCGTT CGCAGAAGAGCAAATGCGTCTCCCATCGCCGGCACTTCCCGGCACGAGGC TAACAGCAACGTTGCGGCCGGAGCAGCAGGTCGCACTAACAATGATTGGG CGCCGCAAGACAAAACGCCCAAGCGGGCATCAGTGTGGGAGCCCGAAAAC TTTCAGGGCGGAGGCGGCAGCAGCAACACGACAGGTGTGCCAAAAAAACG GCGCTCCACGGACGCCCTCGCCGGTAGCAACGCCAATGGGCTCCCATCTC CCCCGCCAGGGAACGGCAACGGGACCGTGCCTGGAACGGGGGTCCACTGG TCGGGGAAGAGCAGCGATCCGACACGCAGCAAGGCTGGGGATGCCGCCGT CGCCGGCGGCACGCGGAGCTTAACTAGTGAGGATATCATTAGCGGTAAAA GTGGTGCGGGTGTAGGAGTGTCAGCGGAGATGCGGGTGGGAGACGGTCGG GCGCGAGGGCCGCCATCGTCTACTCATGATGCGCGGGTGGTCCCCCCGGC AGCGACAAGCTCTAGGGGAGGCATGATCCCGTCGGCCCTTGGAGAGGGTA ACGCTGGGATTCGGGAGAGAAGAAAGCCCAGCAGAGAGGAAGAGGCGCAG AGAGACGTGGGAAATTTGACGCCCTACGAGGTGAGCGTGGATGTAGGCGA GGTGAGTGTTGTTTGTTGGTCCTGGGTTGGTGGGAAATTTGACGCCCTAC GAGGTGAGCGTGGATGTAGGCGAGGTGAGTGTTGTTTGTTGTTCCTGGGT TGGTTGAGAGTCATTTTTTGCTGTCTTCCAATCCTACGTTTGGTTTTGAC GTTCACATCATCCTCTTGTGGTACCGACGTGCTAGCATCAGCTTCTTGTG GTCACACGATTGGGCCATCATTCCGCGCCGTACCCATCCCGGCTGGCTGT TCTTGCGTGTCCCCTAGATCCCGGTCAGTGACCACTGTCGTCCTCAACCT GATGCTTGCGTTTCCCTGTGCTCGATTGGGATGCGTCTTTGCCGCCGCTC GTACCGGCACTCTCCCTCTATGCCGTAATCCTTCGTGTGCGTTTCCCCTC TCGTTGCGGTGCAGGCCGAAAGCTGCCCGTCGAGCTTGACGCAACAGCGG GCAGAGGAAGCCGGGCGACGAGCACAAACGGAGCGGTTTTTAGCGCCTCT TCCTCCCGTTAGAGCAGGCGGAGATGGGGGGAGGAAAGCCGACCTTACCA TCTCCAATTGGCCGCCCCGGACGGATAGCGTTAGTGGGACCGGTGACGCC CGTGTCGTCGGCGGCAGTGGCGATAACATTGTTGGCAGCGGCTATAGGAA CGGCAATAGCAGTATAGCCTGCTGGAAAACATCGTCGGCATCGGACTCTA ACTCCTTAGCTTCCTCCGCCCCTGTTTTCAGCAACGGGGTGCTCGCTCGT CGACCTTGTTCGTCGACCGGTGGGGAGAAGAATGGTGGCTCCGAAAATGG CGGGGATGGGATCGCCGGCGCGGCCAGATCCCTCCGAGCGGTACTGAGAG GGCGAGACGCGGCCTCAAGGGAGGTGGGATCGTCCTCCTGCTCTTCAACT AATACTCATGCCAAAGAGGATGCCGAACGCGGCGTTGGTGGTGGCAGGGG CGCCGTTTCTGCTGCTCCTGAGGTCGCGCCGAGAGACGGAGGGCGGTTGG CTTGGTGCGGGGACAGGGGGTTGTTGGCGAGGCCACCTGCTACGCTGCAG CCTCGCCAGCACCCCTTTGTAAGGTCGTCATCGTTGTCCTACCCAGCTTC CGCCAAAGGCTTGGCTTCCGCCGCCGGCGGAGGGGCCCATGTGGCCGGCA GTTCCTCCGCGTGTGATGCACTTACGGGACGGTGTTCACAACGGCAGTCC ACAGCGGCGGCAGCAGCGTGCCTCGGGCGTCTCGATTTCACCGCCGTCAA TGTAGAGGCCGCCGGCGCGGCGTACCCAAGCGGTGGTGGGAGAGGTAGTG CCGACCGCCAAGGCGATGTGGCCTGGGGTGGGGGAGTCGCGAATGGCGGT AGCGCTGCCGGCGAAGGCCATGGTCGTGGTGCGGGTGGGATACCATCCGG AGATCAAGAAGCTAGAGATGGTCCCGAAAGTGTGACGAGAGAGAGTAGGG AAGTACTGGTGATGGAGAGTTTGGAAGTTGGGGCTGATGACGTCGCTACG ATGTCGTCGTCCGCTCTGTCGGTGACAAGCAGGGAAGACGAGGAGTCTGA CGCGGAAGACGTGTACATGATGGTGAACGACCGCTACGACCCCGACTACC ACCCTTTCGCCGAGAGCCTTTTAGACGCAAATTCTGGGGACGAATCCAGT ATAAACATGAGCATGGCGATTGAGCATACTAACCATCACAACGAAGACGT CGCGGAGGCGAAGACGACTAGGATGAGGACTCGAGCGGCGGCGGGAGAGG CGTATCCAACACGGAAGAAGACATCAAGTCATGCGACCGTGCTCGGGGAT GACAGCGAAGAGTGCCCAAGAGAGTCGTCCCTTGCGTCAAATGGTTCCGA TTCCGGTAGTCTTCCAGATGGCGATTCCGGCGGTCACCTGTCCGCCGGAG AAGAAGCGCCTACGACGCGGGGCGGCGGCAGAAAGAAAAAGCTTAAGCTC AACGCGGCGCGGCGTCGTGCCAAAGCGAGCGCCAAGGCAGAGCAATGCAA TGACATGGATAGCAAGCCGGAGCCTCGCGTCGCCAAGCCTCGGACGCGAA CGGTTGTGGAGCCTTTGGTCCCTCCGCAG
back to top

Coding sequence (CDS) from alignment at Ecto-sp13_S_contig14716:1..3029-

>mRNA_Ecto-sp13_S_contig14716.3608.1 ID=mRNA_Ecto-sp13_S_contig14716.3608.1|Name=mRNA_Ecto-sp13_S_contig14716.3608.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=2616bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14716:1..3029- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGAGCTCAATTGTCGGAGCGGCACTACCCTGGGTTGGAGAAAAGGTGTC
TGACTTGCTGGCTCGTCAAAGAGAGGCGAGCAACAACATGGTAGCGGGCG
GCAGCGGCAGGGCTGGCATCGTCGATGCCGATCTCACTACGGCGACTGCG
ATGAGGATGGGTGCTTCTTCATCGGCTCGAGCGCGCGCCGCGCGAGCTGC
TGCGTCCGGTAGCAGAAGGGCAACGCAACTCAAGAACGGCAGCAACAGCA
GGAATCGCAGCGGTAGCAATAGTGGCTGTATTTCCCCTGTCCGACGCGTT
CGCAGAAGAGCAAATGCGTCTCCCATCGCCGGCACTTCCCGGCACGAGGC
TAACAGCAACGTTGCGGCCGGAGCAGCAGGTCGCACTAACAATGATTGGG
CGCCGCAAGACAAAACGCCCAAGCGGGCATCAGTGTGGGAGCCCGAAAAC
TTTCAGGGCGGAGGCGGCAGCAGCAACACGACAGGTGTGCCAAAAAAACG
GCGCTCCACGGACGCCCTCGCCGGTAGCAACGCCAATGGGCTCCCATCTC
CCCCGCCAGGGAACGGCAACGGGACCGTGCCTGGAACGGGGGTCCACTGG
TCGGGGAAGAGCAGCGATCCGACACGCAGCAAGGCTGGGGATGCCGCCGT
CGCCGGCGGCACGCGGAGCTTAACTAGTGAGGATATCATTAGCGGTAAAA
GTGGTGCGGGTGTAGGAGTGTCAGCGGAGATGCGGGTGGGAGACGGTCGG
GCGCGAGGGCCGCCATCGTCTACTCATGATGCGCGGGTGGTCCCCCCGGC
AGCGACAAGCTCTAGGGGAGGCATGATCCCGTCGGCCCTTGGAGAGGGTA
ACGCTGGGATTCGGGAGAGAAGAAAGCCCAGCAGAGAGGAAGAGGCGCAG
AGAGACGTGGGAAATTTGACGCCCTACGAGGTGAGCGTGGATGTAGGCGA
GGCCGAAAGCTGCCCGTCGAGCTTGACGCAACAGCGGGCAGAGGAAGCCG
GGCGACGAGCACAAACGGAGCGGTTTTTAGCGCCTCTTCCTCCCGTTAGA
GCAGGCGGAGATGGGGGGAGGAAAGCCGACCTTACCATCTCCAATTGGCC
GCCCCGGACGGATAGCGTTAGTGGGACCGGTGACGCCCGTGTCGTCGGCG
GCAGTGGCGATAACATTGTTGGCAGCGGCTATAGGAACGGCAATAGCAGT
ATAGCCTGCTGGAAAACATCGTCGGCATCGGACTCTAACTCCTTAGCTTC
CTCCGCCCCTGTTTTCAGCAACGGGGTGCTCGCTCGTCGACCTTGTTCGT
CGACCGGTGGGGAGAAGAATGGTGGCTCCGAAAATGGCGGGGATGGGATC
GCCGGCGCGGCCAGATCCCTCCGAGCGGTACTGAGAGGGCGAGACGCGGC
CTCAAGGGAGGTGGGATCGTCCTCCTGCTCTTCAACTAATACTCATGCCA
AAGAGGATGCCGAACGCGGCGTTGGTGGTGGCAGGGGCGCCGTTTCTGCT
GCTCCTGAGGTCGCGCCGAGAGACGGAGGGCGGTTGGCTTGGTGCGGGGA
CAGGGGGTTGTTGGCGAGGCCACCTGCTACGCTGCAGCCTCGCCAGCACC
CCTTTGTAAGGTCGTCATCGTTGTCCTACCCAGCTTCCGCCAAAGGCTTG
GCTTCCGCCGCCGGCGGAGGGGCCCATGTGGCCGGCAGTTCCTCCGCGTG
TGATGCACTTACGGGACGGTGTTCACAACGGCAGTCCACAGCGGCGGCAG
CAGCGTGCCTCGGGCGTCTCGATTTCACCGCCGTCAATGTAGAGGCCGCC
GGCGCGGCGTACCCAAGCGGTGGTGGGAGAGGTAGTGCCGACCGCCAAGG
CGATGTGGCCTGGGGTGGGGGAGTCGCGAATGGCGGTAGCGCTGCCGGCG
AAGGCCATGGTCGTGGTGCGGGTGGGATACCATCCGGAGATCAAGAAGCT
AGAGATGGTCCCGAAAGTGTGACGAGAGAGAGTAGGGAAGTACTGGTGAT
GGAGAGTTTGGAAGTTGGGGCTGATGACGTCGCTACGATGTCGTCGTCCG
CTCTGTCGGTGACAAGCAGGGAAGACGAGGAGTCTGACGCGGAAGACGTG
TACATGATGGTGAACGACCGCTACGACCCCGACTACCACCCTTTCGCCGA
GAGCCTTTTAGACGCAAATTCTGGGGACGAATCCAGTATAAACATGAGCA
TGGCGATTGAGCATACTAACCATCACAACGAAGACGTCGCGGAGGCGAAG
ACGACTAGGATGAGGACTCGAGCGGCGGCGGGAGAGGCGTATCCAACACG
GAAGAAGACATCAAGTCATGCGACCGTGCTCGGGGATGACAGCGAAGAGT
GCCCAAGAGAGTCGTCCCTTGCGTCAAATGGTTCCGATTCCGGTAGTCTT
CCAGATGGCGATTCCGGCGGTCACCTGTCCGCCGGAGAAGAAGCGCCTAC
GACGCGGGGCGGCGGCAGAAAGAAAAAGCTTAAGCTCAACGCGGCGCGGC
GTCGTGCCAAAGCGAGCGCCAAGGCAGAGCAATGCAATGACATGGATAGC
AAGCCGGAGCCTCGCGTCGCCAAGCCTCGGACGCGAACGGTTGTGGAGCC
TTTGGTCCCTCCGCAG
back to top