mRNA_Ecto-sp13_S_contig14696.3587.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig14696.3587.1
Unique NamemRNA_Ecto-sp13_S_contig14696.3587.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig14696.3587.1 vs. uniprot
Match: D7FXH8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXH8_ECTSI)

HSP 1 Score: 519 bits (1337), Expect = 1.090e-177
Identity = 259/283 (91.52%), Postives = 269/283 (95.05%), Query Frame = 2
Query:  512 ILQGRGLCVLFKTSAATAFVGQERDPDEYLDYILLDMYWYPSGNETTNSTTCVEDGEEWEPHREWVYAFLADPEDVTVVSTAVQLSYSCITSTSTSHVFNSVGIGLTDQIKYAADDVSSYKAVSINSGVYKDQADANITKPYARLSMELKQQFDSWEIITEADPFEFAEILGNIGGFWDLILILWPLFFVAASQPEPYLKPREFAKSVTRTVERASGITKTVANSGPRRRLESMETINETSGASLGDGFREEPAPWEQQPVSGAQRSVSRRVPNSFRVIQPEV 1360
            I++GRGLCV FKTSAATAFVGQERDPDEYLDYILLDMYWYPSGNETT+STTCVEDGEEWEPHREWVYAFL DPEDVT+VSTAVQLSYSCITS STSHVFNSVGIGLT+QIKYAADDVSSYKAVSINSGVYKDQADA+ITKPYARLSMELKQQFDSWEIITEADPFEFAEILGNIGGFWDLILILWPLFFVAASQPEP LKPR FAKSVTRTVERASGITKTVANSGP RR+ES+E  NETSGASL DGF+EEPAPWE  P  G QRSVSRRVPNSFRVIQP+V
Sbjct:  124 IVKGRGLCVEFKTSAATAFVGQERDPDEYLDYILLDMYWYPSGNETTDSTTCVEDGEEWEPHREWVYAFLTDPEDVTMVSTAVQLSYSCITSASTSHVFNSVGIGLTNQIKYAADDVSSYKAVSINSGVYKDQADADITKPYARLSMELKQQFDSWEIITEADPFEFAEILGNIGGFWDLILILWPLFFVAASQPEPNLKPRNFAKSVTRTVERASGITKTVANSGPMRRVESIEMRNETSGASLEDGFQEEPAPWEHPPALGVQRSVSRRVPNSFRVIQPDV 406          
BLAST of mRNA_Ecto-sp13_S_contig14696.3587.1 vs. uniprot
Match: A0A6H5JF84_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF84_9PHAE)

HSP 1 Score: 369 bits (947), Expect = 1.430e-121
Identity = 185/219 (84.47%), Postives = 198/219 (90.41%), Query Frame = 2
Query:  701 EWVYAFLADPEDVTVVSTAVQLSYSCITSTSTSHVFNSVGIGLTDQIKYAADDVSSYKAVSINSGVYKDQADANITKPYARLSMELKQQFDSWEIITEADPFEFAEILGNIGGFWDLILILWPLFFVAASQPEPYLKPREFAKSVTRTVERASGITKTVANSGPRRRLESMETINETSGASLGDGFREEPAPWEQQPVSGAQRSVSRRVPNSFRVIQPE 1357
            EWVYAFL DPED+T+VSTA+QLSYSCITSTSTSHVFNSVGIGLT+QIKY  D +SSYKAVSINSGVYKDQAD +ITKPYARLSMELKQQFDSWEIITEADPFEFAEILGNIGGFWDLILILWPLFFVAASQPEP LKPR FAKS TRTVER SG+TKTVANSGP RR+ES+E  N TSGASL DG +EEP PWE  P  G QRS+SRRVPNSFRV+QP+
Sbjct:    9 EWVYAFLTDPEDLTMVSTAIQLSYSCITSTSTSHVFNSVGIGLTNQIKYTGDIISSYKAVSINSGVYKDQADGDITKPYARLSMELKQQFDSWEIITEADPFEFAEILGNIGGFWDLILILWPLFFVAASQPEPNLKPRNFAKSFTRTVERFSGMTKTVANSGPMRRIESIEMRNGTSGASLEDGLQEEPVPWEHPPALGVQRSLSRRVPNSFRVMQPD 227          
BLAST of mRNA_Ecto-sp13_S_contig14696.3587.1 vs. uniprot
Match: D8LNQ3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNQ3_ECTSI)

HSP 1 Score: 320 bits (820), Expect = 7.590e-100
Identity = 160/265 (60.38%), Postives = 195/265 (73.58%), Query Frame = 2
Query:  518 QGRGLCVLFKTSAATAFVGQERDPDEYLDYILLDMYWYPSGNETTNSTTCVEDGEEWEPHREWVYAFLADPEDVTVVSTAVQLSYSCITSTSTSHVFNSVGIGLTDQIKYAADDVSSYKAVSINSGVYKDQADANITKPYARLSMELKQQFDSWEIITEADPFEFAEILGNIGGFWDLILILWPLFFVAASQPEPYLKPREFAKSVTRTVERASGITKTVANSGPRRRLESMETINETSGASLGDGF--REEPAPWEQQPVSGAQ 1306
             GRG CV+F+TSAAT FVGQERD  EYLDYI LDMYWYP G    NSTTCV +G EW  HREWVY FL+DPED T +ST   LSYSCIT+TS +H+FN++GIGLT+Q K+  DD+SSYKA+  N GV+K+  + N+T PYA LS+E+KQQ DSWEIITE++P+EFAE+ GNIGGFWDL+LILWPL FV A+Q +P+LKPR F KSV R  ERA+G+TK +A + P R   +M  +         DGF  +EE   WE QPV   Q
Sbjct:  145 DGRGHCVIFETSAATDFVGQERDSHEYLDYIHLDMYWYPGGK-FGNSTTCVAEGVEWADHREWVYGFLSDPEDSTAISTGFPLSYSCITNTSNTHIFNTLGIGLTNQNKFMEDDISSYKALFTNFGVHKNTVNPNVTMPYAHLSLEMKQQADSWEIITESNPYEFAEMFGNIGGFWDLLLILWPLCFVTATQQDPHLKPRTFKKSVIRGAERAAGVTKVIARAAPVRHSNAMPGV---------DGFEDQEEVPAWEGQPVQRQQ 399          
BLAST of mRNA_Ecto-sp13_S_contig14696.3587.1 vs. uniprot
Match: A0A6H5L518_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L518_9PHAE)

HSP 1 Score: 320 bits (820), Expect = 1.700e-99
Identity = 163/278 (58.63%), Postives = 199/278 (71.58%), Query Frame = 2
Query:  518 QGRGLCVLFKTSAATAFVGQERDPDEYLDYILLDMYWYPSGNETTNSTTCVEDGEEWEPHREWVYAFLADPEDVTVVSTAVQLSYSCITSTSTSHVFNSVGIGLTDQIKYAADDVSSYKAVSINSGVYKDQADANITKPYARLSMELKQQFDSWEIITEADPFEFAEILGNIGGFWDLILILWPLFFVAASQPEPYLKPREFAKSVTRTVERASGITKTVANSGPRRRLESMETINETSGASLGDGFREE---------PAPWEQQPVSGAQRSVSRR 1324
             GRG CV+F+TSAATAFVGQERDP E+LDYILLDMYW P G  +  STTCV DG EW  HREWVY FL+DP+D + +ST V LSYSCIT+TS +H FN++GIGLT Q K+  DD SSYKA+  N GV+K+  + NIT PYA LS+E+KQQFDSWEIITE++P+EFAE+ GNIGGFWDL+LILWPL FVAA+Q +P+LKPR F KSV R  ERA+ ++K +A + P      +      S AS  DGF +E         PAP +Q P S      +RR
Sbjct:  168 DGRGKCVIFRTSAATAFVGQERDPHEFLDYILLDMYWNPGGT-SGKSTTCVPDGVEWTDHREWVYGFLSDPDDPSAISTGVHLSYSCITNTSNTHTFNTMGIGLTQQKKFMDDDKSSYKALFTNFGVHKNVVNPNITTPYAHLSLEMKQQFDSWEIITESNPYEFAEMFGNIGGFWDLLLILWPLCFVAAAQQDPHLKPRSFKKSVVRGAERAASVSKAIARAAP------INPSITKSAASAVDGFEDEEEAPAWDRRPAPQQQPPQSATTWQDARR 438          
BLAST of mRNA_Ecto-sp13_S_contig14696.3587.1 vs. uniprot
Match: D8LNS2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNS2_ECTSI)

HSP 1 Score: 318 bits (815), Expect = 4.620e-99
Identity = 161/263 (61.22%), Postives = 195/263 (74.14%), Query Frame = 2
Query:  518 QGRGLCVLFKTSAATAFVGQERDPDEYLDYILLD-MYWYPSGNETTNSTTCVEDGEEWEPHREWVYAFLADPEDVTVVSTAVQLSYSCITSTSTSHVFNSVGIGLTDQIKYAADDVSSYKAVSINSGVYKDQADANITKPYARLSMELKQQFDSWEIITEADPFEFAEILGNIGGFWDLILILWPLFFVAASQPEPYLKPREFAKSVTRTVERASGITKTVANSGPRRRLESMETINETSGASLGDGFREE---PAPWEQQPV 1294
             GRG CV+FKTSAAT FVGQERDP EYLDY+ LD MYWYP G    NSTTCV DG EW  HREWVY FL+DPED   +ST   LSYSCIT+TS +H+FN++GIGLT+Q K+  DD+SSYKA+  N GV+K+  + N+T PYA LS+E+KQQ DSWEIITE++P+EFAE+ GNIGGFWDL+LILWPL FVA +Q +P+LKPR F KSV R  ERA+G+TK +A + P R   SM      +     DGF ++   PA WE QPV
Sbjct:  144 DGRGQCVIFKTSAATTFVGQERDPHEYLDYVHLDQMYWYPGGK-FGNSTTCVVDGVEWADHREWVYGFLSDPEDPAAISTGFPLSYSCITNTSNTHIFNTLGIGLTNQNKFMEDDISSYKALFTNFGVHKNTVNPNVTMPYAHLSLEMKQQADSWEIITESNPYEFAEMFGNIGGFWDLLLILWPLCFVATTQQDPHLKPRTFKKSVIRGAERAAGVTKVIARAAPIRHSSSM------TATPAVDGFEDQEVVPA-WEGQPV 398          
BLAST of mRNA_Ecto-sp13_S_contig14696.3587.1 vs. uniprot
Match: A0A6H5JV19_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV19_9PHAE)

HSP 1 Score: 301 bits (771), Expect = 1.320e-92
Identity = 157/309 (50.81%), Postives = 199/309 (64.40%), Query Frame = 2
Query:  518 QGRGLCVLFKTSAATAFVGQERDPDEYLDYILLD--------------------------------------------MYWYPSGNETTNSTTCVEDGEEWEPHREWVYAFLADPEDVTVVSTAVQLSYSCITSTSTSHVFNSVGIGLTDQIKYAADDVSSYKAVSINSGVYKDQADANITKPYARLSMELKQQFDSWEIITEADPFEFAEILGNIGGFWDLILILWPLFFVAASQPEPYLKPREFAKSVTRTVERASGITKTVANSGPRRRLESMETINETSGASLGDGF--REEPAPWEQQPVSGAQ 1306
             GRG CV+F+TSA T F+GQERDP EYLDY+ LD                                            MYWYP G    NSTTCV +G EW  HREWVY FL+DPED T +ST   LSYSCIT+TS +H+FN++G+GLT+QIK+ +DD+SSYKA+  N GV+K+  + NIT PYA +S+E+KQQ DSWEIITE++P+EFAE+ GNIGGFWDL+LILWPL FVAA+Q +P+LKPR F KS  R  +R +G+TK VA + P      ++  + TS AS  DGF  +EE   W++QP    Q
Sbjct:   95 NGRGHCVVFETSAITDFLGQERDPHEYLDYVHLDGILPVGLVANGSLSQHELEPVIGSTVPLSRPCRPDKRMFFADEQMYWYPGGK-FGNSTTCVNEGVEWADHREWVYGFLSDPEDPTAISTGFPLSYSCITNTSNTHIFNTLGVGLTNQIKFMSDDISSYKALFTNFGVHKNAVNPNITMPYAHVSLEMKQQADSWEIITESNPYEFAEMFGNIGGFWDLLLILWPLCFVAATQQDPHLKPRSFTKSAVRGAQRVAGVTKMVARAAP------VKHTSSTSHASAVDGFEDQEEVPAWDRQPAQRQQ 396          
BLAST of mRNA_Ecto-sp13_S_contig14696.3587.1 vs. uniprot
Match: D8LMD2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMD2_ECTSI)

HSP 1 Score: 225 bits (574), Expect = 4.510e-64
Identity = 109/211 (51.66%), Postives = 157/211 (74.41%), Query Frame = 2
Query:  527 GLCVLFKTSAATAFVGQERDPDEYLDYILLDMYWYPSGNETTNSTTCVEDGEEWEPHREWVYAFLAD---PEDVTVVSTAVQLSYSCITSTSTSHVFNSVGIGLTDQIKYAADDVSSYKAVSINSGVYKDQADANITKPYARLSMELKQQFDSWEIITEADPFEFAEILGNIGGFWDLILILWPLFFVAASQPEPYLKPREFAKSVTRTVE 1150
            G CV F+TS  + F+GQER+   YLDY+LLDMYWYP G E+ +S TCV +G  WEPH EW+Y  L D   PE   +VST +Q+ YSCIT+ S+SH F  VG+G+T + +   + V++ KA+S+++  +KD+ +A I KPYA+LS++ +Q+ +S E+ITE DPF+ AE+ GN+GGFWDL++++WP+FFVAAS+ +P+LKPR F KSV + +E
Sbjct:  116 GWCVEFETSTISQFLGQERNASYYLDYLLLDMYWYPGGTES-DSNTCVVEG--WEPHSEWMYVKLKDSGYPESG-LVSTGIQVPYSCITNVSSSHSFTYVGMGVTIEERLGEEPVATNKALSVSTATHKDKVNAAIDKPYAQLSLQFQQEPNSLEVITENDPFDLAEMFGNVGGFWDLLMLVWPIFFVAASRQDPHLKPRNFKKSVAKGLE 322          
BLAST of mRNA_Ecto-sp13_S_contig14696.3587.1 vs. uniprot
Match: D8LMD1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMD1_ECTSI)

HSP 1 Score: 224 bits (571), Expect = 7.960e-63
Identity = 108/210 (51.43%), Postives = 150/210 (71.43%), Query Frame = 2
Query:  512 ILQGRGLCVLFKTSAATAFVGQERDPDEYLDYILLDMYWYPSGNETTNSTTCVEDGEEWEPHREWVYAFLADPEDVTVVSTAVQLSYSCITSTSTSHVFNSVGIGLTDQIKYAADDVSSYKAVSINSGVYKDQADANITKPYARLSMELKQQFDSWEIITEADPFEFAEILGNIGGFWDLILILWPLFFVAASQPEPYLKPREFAKSVTR 1141
            +    G CV F+TS  T F+ +ERD   YLDY+LLDMYWYP G E  +S TCV +G  W+ H +W+Y FL DPE   V ST +Q+ YSCIT+ S+SH F  VGIG+T + K   + + + KA+S+++   KD+ +  I KPYA+LS++ +Q+ +S EIITE DP + AE+ GN+GGFWDL++I+WP+FFVAAS+ +P+LKPR F KSVT+
Sbjct:  185 LTPNNGWCVEFQTSKITRFLDRERDAKYYLDYLLLDMYWYPGGLEA-DSNTCVVEG--WKTHNQWMYVFLNDPESERV-STGIQVPYSCITNVSSSHSFTYVGIGVTIEDKLGQEPIVNNKALSVSTATVKDEVNPAIVKPYAQLSLQFQQEPNSLEIITEVDPLDLAEMFGNVGGFWDLLMIMWPIFFVAASRQDPHLKPRNFTKSVTK 390          
BLAST of mRNA_Ecto-sp13_S_contig14696.3587.1 vs. uniprot
Match: A0A6H5JN97_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN97_9PHAE)

HSP 1 Score: 222 bits (565), Expect = 8.640e-63
Identity = 108/205 (52.68%), Postives = 150/205 (73.17%), Query Frame = 2
Query:  527 GLCVLFKTSAATAFVGQERDPDEYLDYILLDMYWYPSGNETTNSTTCVEDGEEWEPHREWVYAFLADPEDVTVVSTAVQLSYSCITSTSTSHVFNSVGIGLTDQIKYAADDVSSYKAVSINSGVYKDQADANITKPYARLSMELKQQFDSWEIITEADPFEFAEILGNIGGFWDLILILWPLFFVAASQPEPYLKPREFAKSVTR 1141
            G CV F+TS  T F+G+ERD   +LD++LLDMYWYP G ET +STTCV +G  W+ H +W+Y FL DP  +  VST V + YSCIT+ S+SH F  VGIGLT +IK   + + S KA+S+++   K + +  I KPYA+LS++++Q  +S E ITE DP + AE+ GN+GGFWDL++I+WP+FFVAAS+ +P+LKPR F +SVT+
Sbjct:  118 GWCVEFQTSKITRFLGEERDASRFLDHLLLDMYWYPGGLET-DSTTCVIEG--WKTHNQWMYVFLNDPA-LGQVSTRVPVPYSCITNVSSSHSFTYVGIGLTTEIKLGQEPIVSNKALSVSTATVKHEVNPAIVKPYAQLSLQVQQAPNSHECITEVDPLDLAEMFGNVGGFWDLLMIIWPIFFVAASRQDPHLKPRNFKESVTK 318          
BLAST of mRNA_Ecto-sp13_S_contig14696.3587.1 vs. uniprot
Match: A0A6H5K474_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K474_9PHAE)

HSP 1 Score: 223 bits (567), Expect = 1.310e-62
Identity = 106/210 (50.48%), Postives = 152/210 (72.38%), Query Frame = 2
Query:  512 ILQGRGLCVLFKTSAATAFVGQERDPDEYLDYILLDMYWYPSGNETTNSTTCVEDGEEWEPHREWVYAFLADPEDVTVVSTAVQLSYSCITSTSTSHVFNSVGIGLTDQIKYAADDVSSYKAVSINSGVYKDQADANITKPYARLSMELKQQFDSWEIITEADPFEFAEILGNIGGFWDLILILWPLFFVAASQPEPYLKPREFAKSVTR 1141
            +    G CV F+TS  T F+G+ERD   YLDY+LLDMYWYP G E  +STTCV +G  W+ H++W+Y FL DP  +  VST +Q+ YSCIT+ S+SH    VGIG+T + K   + + + KA+S+++   KD+ +  I KPYA+LS++++Q+ +S E+ITE DP + AE+ GN+GGFWDL++I+WP+FFVAAS+ +P+LKPR F KSV +
Sbjct:  153 LTPNNGWCVEFQTSKITRFLGRERDAKYYLDYLLLDMYWYPGGLEV-DSTTCVVEG--WKTHKQWMYVFLNDPV-LGQVSTGIQVPYSCITNVSSSHSHTYVGIGVTTEDKLGQEPIVNNKALSVSTATVKDEVNPAIVKPYAQLSLQVQQEPNSLEVITEVDPLDLAEMFGNVGGFWDLLMIMWPIFFVAASRQDPHLKPRNFKKSVNK 358          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14696.3587.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 23
Match NameE-valueIdentityDescription
D7FXH8_ECTSI1.090e-17791.52Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JF84_9PHAE1.430e-12184.47Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LNQ3_ECTSI7.590e-10060.38Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L518_9PHAE1.700e-9958.63Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LNS2_ECTSI4.620e-9961.22Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JV19_9PHAE1.320e-9250.81Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LMD2_ECTSI4.510e-6451.66Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D8LMD1_ECTSI7.960e-6351.43Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5JN97_9PHAE8.640e-6352.68Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K474_9PHAE1.310e-6250.48Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig14696contigEcto-sp13_S_contig14696:256..4352 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Model size1935
Hectar predicted targeting categorysignal peptide
Exons7
Cds size948
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig14696.3587.1prot_Ecto-sp13_S_contig14696.3587.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig14696 828..3937 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462783.8552897-UTR-Ecto-sp13_S_contig14696:255..8271681462783.8552897-UTR-Ecto-sp13_S_contig14696:255..827Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig14696 256..827 -
1681462783.9462225-UTR-Ecto-sp13_S_contig14696:3937..43521681462783.9462225-UTR-Ecto-sp13_S_contig14696:3937..4352Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig14696 3938..4352 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462783.8682218-CDS-Ecto-sp13_S_contig14696:827..8841681462783.8682218-CDS-Ecto-sp13_S_contig14696:827..884Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14696 828..884 -
1681462783.879517-CDS-Ecto-sp13_S_contig14696:1453..17131681462783.879517-CDS-Ecto-sp13_S_contig14696:1453..1713Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14696 1454..1713 -
1681462783.8909233-CDS-Ecto-sp13_S_contig14696:1907..20431681462783.8909233-CDS-Ecto-sp13_S_contig14696:1907..2043Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14696 1908..2043 -
1681462783.898969-CDS-Ecto-sp13_S_contig14696:2222..23151681462783.898969-CDS-Ecto-sp13_S_contig14696:2222..2315Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14696 2223..2315 -
1681462783.916539-CDS-Ecto-sp13_S_contig14696:2556..26741681462783.916539-CDS-Ecto-sp13_S_contig14696:2556..2674Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14696 2557..2674 -
1681462783.9270265-CDS-Ecto-sp13_S_contig14696:2871..29511681462783.9270265-CDS-Ecto-sp13_S_contig14696:2871..2951Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14696 2872..2951 -
1681462783.9371138-CDS-Ecto-sp13_S_contig14696:3733..39371681462783.9371138-CDS-Ecto-sp13_S_contig14696:3733..3937Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14696 3734..3937 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig14696.3587.1

>prot_Ecto-sp13_S_contig14696.3587.1 ID=prot_Ecto-sp13_S_contig14696.3587.1|Name=mRNA_Ecto-sp13_S_contig14696.3587.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=316bp
MEPCTCSLGPHCVAPKTPITLIAWSLVALGLPILQGRGLCVLFKTSAATA
FVGQERDPDEYLDYILLDMYWYPSGNETTNSTTCVEDGEEWEPHREWVYA
FLADPEDVTVVSTAVQLSYSCITSTSTSHVFNSVGIGLTDQIKYAADDVS
SYKAVSINSGVYKDQADANITKPYARLSMELKQQFDSWEIITEADPFEFA
EILGNIGGFWDLILILWPLFFVAASQPEPYLKPREFAKSVTRTVERASGI
TKTVANSGPRRRLESMETINETSGASLGDGFREEPAPWEQQPVSGAQRSV
SRRVPNSFRVIQPEV*
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mRNA from alignment at Ecto-sp13_S_contig14696:256..4352-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig14696.3587.1 ID=mRNA_Ecto-sp13_S_contig14696.3587.1|Name=mRNA_Ecto-sp13_S_contig14696.3587.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4097bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14696:256..4352- (Ectocarpus species13 EcNAP12_S_4_19m)
GCAGGCCCACCCAGCGCAATTTTCTACAATAGCGAAGGAACCGACCAAAA CGCAACCGACCCACTGGAAATCGAGGCTTCCTCGATCGACACGAGCGCCA TAGAGGGGATCGTAACGGCAAGAGATGCAGTGCATGCACGAATACGCTGA GGTTGCTGTGGTTCGAAGGTTGAAGGCGTGATTGTGTAAGGGTTGGAAAA GCCCATCCATCTATGCGGTATGAGTATAAAGAGTTTGGGGCTGACGCGCT TGGGGATAGAACGGACATGTCTTGTGGCCAACGCTGAGTGTCGTCCGGAC CTTCGGGCCCAGCAAGCCATTGAGGAACCCGTGTGTGTATCCCAGTCTCT ATGTACTCTTCTTTGTGTGCGCTGTCTTCGGCAACATCGACGCCCATTTG TACGTCGACACGCGAATGGAGCCATGCACGTGCTCGTTGGGTCCTCATTG TGTGGCCCCTAAAACACCTATCACACTCATTGCTTGGTCTCTTGTCGCGC TTGGCCTTCCCATCCTTCAGGGGAGAGGACTTTGTGTGTTGTTCAAGACA TCGGCTGCGACCGCTTTTGTTGGGCAAGAGAGGGACCCCGACGAGTACTT GGACTACATCCTCTTGGACGTGAGGCGTCGCCAATCTGTCTGGTAGTCAC CGGAAAACGAAACTCGTGACTCCACTCCATATGAAACGTTGGCTTGTGTT TCACACGACGGCACGATTTGCGTAGTTTGGCGGGAGTGATTTGGTCGGTT GCTATGACCTGGGATGGGCATAGTGCGTCCTGCGCAGATAATAGACGGAA GACATTTCCCGCCAGGCCCAGATCAAACGGTGTTGTCATACTTTTCATAG CAGCGGGTGACCCGGAGATACTGTGGCTTCGAATGGACCATTGCAGAATC CATGCCGGGTTCCCCTCCGTTTCCCTAGCTGATCTTCGGCGGTGACCTGG TAGTCGGGTCTTTCCTCGATTCGACATTGTTTCGGCTTTCCTGCAGGATT GGTGATGAGGTATAGATTTCGTCCGTGTCGTTCAGCAACACGCGGGCTGG GGCGAGAACCACAAGCATAGCGTTGTACACCTACATAGACTGCTGTTCAG CTGTCGGGGCCAATAGGTCACCCGCAAGGCCGCAGGAGTCAACGGCATCA GAGTGAGGCTGCTATAGCTTCACAAGACCGGTCTTGTGCCAAGTCCGACG CTGACCGGCAGGAGGTCCTTTGATCCGCCTGCTGTGGGCGCGTCAAGATG TCCAGTCTCCAGCGTCATCACTGCTGTACGTCACGGATGTGGAAGGTATC TCGAGCCTCGTCGATATCACCCTTTCTGTTAACAGCCACTCTGGCGTTGC TGCGGTCGAGTTACCCAACAAGCACGTACCCCCTTTGCTTGACTTGAGCA GATGTATTGGTACCCCAGCGGCAACGAGACGACGAATTCTACGACGTGCG TGGAAGATGGAGAAGAGTGGGAGCCTCACAGGTGAACAAGCCCAAGCCGT CTACCCGCACAGGATAATGAGACGAAAATACCGAAAAGTGCCAGGCTCAT GACATGAGACCCCCAACTTTCAGACGAGTGACGTACGTCTTTTGGACATG GCGGAGATCGGCCAAAAAGACGGTAGGCACTCCTTTTCTAACAACAACTT GTCGCTGTTTTCTTCCCGAACCTCTCAGAGAGTGGGTGTACGCGTTCCTG GCCGATCCAGAGGACGTAACCGTGGTGTCGACCGCAGTACAGTTGTCCTA CAGCTGCATTACGAGTACATCCACCAGCCACGTCTTCAACTCGGTGGTGA GCTAACCCCCGCACGGTGAACTCAGAACCTTCAGGTAGAGACGGTAGTGT GCCAACAGCAGCTCTGTGCACCCGACATGCTGGTGGAGATGCTTGCGCCA CAATCGTTTCATCGCTGGAAGACCTTCAGTCGTTTTTTTTTGTGTGTGTG TTTATGTGGTTGTAGCATGGCTGTTGATGGAACTCTTCTCACAGCGCTGA ACGTGGGCGCGCGCCTTGCGTATTTTCTCTGATCCAGGGGATCGGCCTCA CCGACCAGATTAAATATGCCGCGGACGATGTTTCTTCGTACAAGGCTGTA TCGATAAACTCCGGGGTGTACAAGGATCAGGTGAGGCGGGCAACTCAAAA GACTGATATTTTGCGTGTTCATTGAAGCTATCAACGCTTATCGCGGTACA TGCCACACAAGACCGTGGCGTAGAACTTGAGGGGCCTCGCTGCTAATCGT CCTCTTCAAAGAAGATTTTCGCACGTCTCTATCTATCACTCGTACTTCCT CTTTTCCAGGCGGACGCTAACATCACCAAGCCATACGCCCGTTTGTCGAT GGAGCTCAAGCAACAGTTTGACTCGTGGGAGATCATCACAGAAGCGGACC CATTCGAATTCGCCGAGATTCTTGGTAACATCGGAGGGTTTTGGGGTAAG TGAAAACAAAAGCAAGCCAAGAAGAAACGCTAGCGGAAAACTCGCAGGGT CTACATCAGGCGGACCTGCTGTGTTTGCCACCAGCTGTGCGTTCTCCTTC ATCAAATATCTTCTGCTGGTAACCCTGCACGTGATTTCATCTATCTCGGT TCTCTCCCCTGTTATTGTGTTCTCTTTGCCCGTTGGCAGATCTGATCCTT ATTTTATGGCCTTTGTTCTTTGTGGCGGCCAGTCAGCCAGAACCATACCT CAAGCCTCGCGAGTTTGCGAAATCGGTCACCAGGACAGTAGAGCGCGCCT CGGGCATAACGAAAACGGTCGCCAATTCGGGGCCTAGGAGGCGTTTAGAA TCTATGGAGACGATAAATGAAACGAGCGGCGCATCCCTGGGAGATGGCTT CCGAGAGGAGCCGGCGCCGTGGGAACAACAACCTGTATCAGGGGCACAGG TGCGTAACGTCACCTTTGGTTCGTTGCCACTAGATGAAGTGCTTCCCGGG AGACGAGGTTCGTCATGGTTTAGCGCATGGTGCATCACAGTGGTTGTTGA GCAAGGGAGGCCGTGCCCTTCGACTCCGTTACATATTGGGCGCGCCGAAC ATTCGAATGACCAGAGACGATGCTTGTCGATCTGCTCCTTTGGGCGAATC ATCCAAATCGAAATTGACTAGTGGCCGTCCATAATCGAACCAATCGTGAC GGTGTAGGCGACTTAGTGGTGCTTGTTCGGCCTGTGTCCAGGTTTTCCCT ACCGCTTCCTGCAAGACCATTGAATAGCTGTGATCGTGAGTCGGCAATGC CTTCCGTTGTGTTTGGTTCGACACATTCGTCCGCAGAACAAACACGTTAA ACGTACCGCCCCCGTCCCCCCCTTCGCTCGGTATCGTTCCCGCTTTCGCG ATGTGCGTTTGCATTGGGGCTCTCGGGCACGTTCTTTGTTCCTTCCGGCT GGCGCTACCCGGCTTTCGTTGCCTGGCGTGGAACGCTACGATTATGTTGA AACCCGCTCACACCCCAGAGGAGCGTCTCAAGAAGAGTACCTAACAGCTT CCGGGTGATACAGCCCGAGGTTTGACCCGTTTGGAACATCCATCCCCAAG TTGGTTGGAAAATATGTACCATGTACCAACAAGTGCTTTACAAGGCGCTC CATTTTATTTTATGTTAGAATGAAACAATACATGATTGATTATGGATGAA ATTCTGCAATGTTCATATTACAGTCGGGGAGGATGGGGCATTGTCATGGT GTTGAATCTTCAGCAAAGAATTCCGTCTGGGTGGGCATATCTTGCAAAGA ACCACCTGCCGAGTCCTGTTCCGTATTTATGCAGGCAGCGTGCCATTCGT TGTTTGCCAGTAGCAAGCATGTTCGTTTTTTCTTTTTCCGTGTTTCCTGG GATCGAGGGCTAGGCAGTGATCGCCAAGGGAGGTAAAAGCAAAAGGAAAG TAGACTATAACAGAGCCGCAAATCTACACACAGTGGTCGGATTCGCTTCA CAGTGAAAAATCGAGTCACATTTAGCCTCGGCTTGGACAAATGTGCACAA GGGCTTTGTGGTCTTGGTATGATTGTTTTTCTGGGTGTCAGACATTTGTC TTCCCTTGGTGCGCTTCGCTCGCTCTTCAGAAGCCAAATTCAAACGG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig14696:256..4352-

>mRNA_Ecto-sp13_S_contig14696.3587.1 ID=mRNA_Ecto-sp13_S_contig14696.3587.1|Name=mRNA_Ecto-sp13_S_contig14696.3587.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=948bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14696:256..4352- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGAGCCATGCACGTGCTCGTTGGGTCCTCATTGTGTGGCCCCTAAAAC
ACCTATCACACTCATTGCTTGGTCTCTTGTCGCGCTTGGCCTTCCCATCC
TTCAGGGGAGAGGACTTTGTGTGTTGTTCAAGACATCGGCTGCGACCGCT
TTTGTTGGGCAAGAGAGGGACCCCGACGAGTACTTGGACTACATCCTCTT
GGACATGTATTGGTACCCCAGCGGCAACGAGACGACGAATTCTACGACGT
GCGTGGAAGATGGAGAAGAGTGGGAGCCTCACAGAGAGTGGGTGTACGCG
TTCCTGGCCGATCCAGAGGACGTAACCGTGGTGTCGACCGCAGTACAGTT
GTCCTACAGCTGCATTACGAGTACATCCACCAGCCACGTCTTCAACTCGG
TGGGGATCGGCCTCACCGACCAGATTAAATATGCCGCGGACGATGTTTCT
TCGTACAAGGCTGTATCGATAAACTCCGGGGTGTACAAGGATCAGGCGGA
CGCTAACATCACCAAGCCATACGCCCGTTTGTCGATGGAGCTCAAGCAAC
AGTTTGACTCGTGGGAGATCATCACAGAAGCGGACCCATTCGAATTCGCC
GAGATTCTTGGTAACATCGGAGGGTTTTGGGATCTGATCCTTATTTTATG
GCCTTTGTTCTTTGTGGCGGCCAGTCAGCCAGAACCATACCTCAAGCCTC
GCGAGTTTGCGAAATCGGTCACCAGGACAGTAGAGCGCGCCTCGGGCATA
ACGAAAACGGTCGCCAATTCGGGGCCTAGGAGGCGTTTAGAATCTATGGA
GACGATAAATGAAACGAGCGGCGCATCCCTGGGAGATGGCTTCCGAGAGG
AGCCGGCGCCGTGGGAACAACAACCTGTATCAGGGGCACAGAGGAGCGTC
TCAAGAAGAGTACCTAACAGCTTCCGGGTGATACAGCCCGAGGTTTGA
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