mRNA_Ecto-sp13_S_contig14696.3587.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig14696.3587.1 vs. uniprot
Match: D7FXH8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXH8_ECTSI) HSP 1 Score: 519 bits (1337), Expect = 1.090e-177 Identity = 259/283 (91.52%), Postives = 269/283 (95.05%), Query Frame = 2
Query: 512 ILQGRGLCVLFKTSAATAFVGQERDPDEYLDYILLDMYWYPSGNETTNSTTCVEDGEEWEPHREWVYAFLADPEDVTVVSTAVQLSYSCITSTSTSHVFNSVGIGLTDQIKYAADDVSSYKAVSINSGVYKDQADANITKPYARLSMELKQQFDSWEIITEADPFEFAEILGNIGGFWDLILILWPLFFVAASQPEPYLKPREFAKSVTRTVERASGITKTVANSGPRRRLESMETINETSGASLGDGFREEPAPWEQQPVSGAQRSVSRRVPNSFRVIQPEV 1360
I++GRGLCV FKTSAATAFVGQERDPDEYLDYILLDMYWYPSGNETT+STTCVEDGEEWEPHREWVYAFL DPEDVT+VSTAVQLSYSCITS STSHVFNSVGIGLT+QIKYAADDVSSYKAVSINSGVYKDQADA+ITKPYARLSMELKQQFDSWEIITEADPFEFAEILGNIGGFWDLILILWPLFFVAASQPEP LKPR FAKSVTRTVERASGITKTVANSGP RR+ES+E NETSGASL DGF+EEPAPWE P G QRSVSRRVPNSFRVIQP+V
Sbjct: 124 IVKGRGLCVEFKTSAATAFVGQERDPDEYLDYILLDMYWYPSGNETTDSTTCVEDGEEWEPHREWVYAFLTDPEDVTMVSTAVQLSYSCITSASTSHVFNSVGIGLTNQIKYAADDVSSYKAVSINSGVYKDQADADITKPYARLSMELKQQFDSWEIITEADPFEFAEILGNIGGFWDLILILWPLFFVAASQPEPNLKPRNFAKSVTRTVERASGITKTVANSGPMRRVESIEMRNETSGASLEDGFQEEPAPWEHPPALGVQRSVSRRVPNSFRVIQPDV 406
BLAST of mRNA_Ecto-sp13_S_contig14696.3587.1 vs. uniprot
Match: A0A6H5JF84_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF84_9PHAE) HSP 1 Score: 369 bits (947), Expect = 1.430e-121 Identity = 185/219 (84.47%), Postives = 198/219 (90.41%), Query Frame = 2
Query: 701 EWVYAFLADPEDVTVVSTAVQLSYSCITSTSTSHVFNSVGIGLTDQIKYAADDVSSYKAVSINSGVYKDQADANITKPYARLSMELKQQFDSWEIITEADPFEFAEILGNIGGFWDLILILWPLFFVAASQPEPYLKPREFAKSVTRTVERASGITKTVANSGPRRRLESMETINETSGASLGDGFREEPAPWEQQPVSGAQRSVSRRVPNSFRVIQPE 1357
EWVYAFL DPED+T+VSTA+QLSYSCITSTSTSHVFNSVGIGLT+QIKY D +SSYKAVSINSGVYKDQAD +ITKPYARLSMELKQQFDSWEIITEADPFEFAEILGNIGGFWDLILILWPLFFVAASQPEP LKPR FAKS TRTVER SG+TKTVANSGP RR+ES+E N TSGASL DG +EEP PWE P G QRS+SRRVPNSFRV+QP+
Sbjct: 9 EWVYAFLTDPEDLTMVSTAIQLSYSCITSTSTSHVFNSVGIGLTNQIKYTGDIISSYKAVSINSGVYKDQADGDITKPYARLSMELKQQFDSWEIITEADPFEFAEILGNIGGFWDLILILWPLFFVAASQPEPNLKPRNFAKSFTRTVERFSGMTKTVANSGPMRRIESIEMRNGTSGASLEDGLQEEPVPWEHPPALGVQRSLSRRVPNSFRVMQPD 227
BLAST of mRNA_Ecto-sp13_S_contig14696.3587.1 vs. uniprot
Match: D8LNQ3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNQ3_ECTSI) HSP 1 Score: 320 bits (820), Expect = 7.590e-100 Identity = 160/265 (60.38%), Postives = 195/265 (73.58%), Query Frame = 2
Query: 518 QGRGLCVLFKTSAATAFVGQERDPDEYLDYILLDMYWYPSGNETTNSTTCVEDGEEWEPHREWVYAFLADPEDVTVVSTAVQLSYSCITSTSTSHVFNSVGIGLTDQIKYAADDVSSYKAVSINSGVYKDQADANITKPYARLSMELKQQFDSWEIITEADPFEFAEILGNIGGFWDLILILWPLFFVAASQPEPYLKPREFAKSVTRTVERASGITKTVANSGPRRRLESMETINETSGASLGDGF--REEPAPWEQQPVSGAQ 1306
GRG CV+F+TSAAT FVGQERD EYLDYI LDMYWYP G NSTTCV +G EW HREWVY FL+DPED T +ST LSYSCIT+TS +H+FN++GIGLT+Q K+ DD+SSYKA+ N GV+K+ + N+T PYA LS+E+KQQ DSWEIITE++P+EFAE+ GNIGGFWDL+LILWPL FV A+Q +P+LKPR F KSV R ERA+G+TK +A + P R +M + DGF +EE WE QPV Q
Sbjct: 145 DGRGHCVIFETSAATDFVGQERDSHEYLDYIHLDMYWYPGGK-FGNSTTCVAEGVEWADHREWVYGFLSDPEDSTAISTGFPLSYSCITNTSNTHIFNTLGIGLTNQNKFMEDDISSYKALFTNFGVHKNTVNPNVTMPYAHLSLEMKQQADSWEIITESNPYEFAEMFGNIGGFWDLLLILWPLCFVTATQQDPHLKPRTFKKSVIRGAERAAGVTKVIARAAPVRHSNAMPGV---------DGFEDQEEVPAWEGQPVQRQQ 399
BLAST of mRNA_Ecto-sp13_S_contig14696.3587.1 vs. uniprot
Match: A0A6H5L518_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L518_9PHAE) HSP 1 Score: 320 bits (820), Expect = 1.700e-99 Identity = 163/278 (58.63%), Postives = 199/278 (71.58%), Query Frame = 2
Query: 518 QGRGLCVLFKTSAATAFVGQERDPDEYLDYILLDMYWYPSGNETTNSTTCVEDGEEWEPHREWVYAFLADPEDVTVVSTAVQLSYSCITSTSTSHVFNSVGIGLTDQIKYAADDVSSYKAVSINSGVYKDQADANITKPYARLSMELKQQFDSWEIITEADPFEFAEILGNIGGFWDLILILWPLFFVAASQPEPYLKPREFAKSVTRTVERASGITKTVANSGPRRRLESMETINETSGASLGDGFREE---------PAPWEQQPVSGAQRSVSRR 1324
GRG CV+F+TSAATAFVGQERDP E+LDYILLDMYW P G + STTCV DG EW HREWVY FL+DP+D + +ST V LSYSCIT+TS +H FN++GIGLT Q K+ DD SSYKA+ N GV+K+ + NIT PYA LS+E+KQQFDSWEIITE++P+EFAE+ GNIGGFWDL+LILWPL FVAA+Q +P+LKPR F KSV R ERA+ ++K +A + P + S AS DGF +E PAP +Q P S +RR
Sbjct: 168 DGRGKCVIFRTSAATAFVGQERDPHEFLDYILLDMYWNPGGT-SGKSTTCVPDGVEWTDHREWVYGFLSDPDDPSAISTGVHLSYSCITNTSNTHTFNTMGIGLTQQKKFMDDDKSSYKALFTNFGVHKNVVNPNITTPYAHLSLEMKQQFDSWEIITESNPYEFAEMFGNIGGFWDLLLILWPLCFVAAAQQDPHLKPRSFKKSVVRGAERAASVSKAIARAAP------INPSITKSAASAVDGFEDEEEAPAWDRRPAPQQQPPQSATTWQDARR 438
BLAST of mRNA_Ecto-sp13_S_contig14696.3587.1 vs. uniprot
Match: D8LNS2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNS2_ECTSI) HSP 1 Score: 318 bits (815), Expect = 4.620e-99 Identity = 161/263 (61.22%), Postives = 195/263 (74.14%), Query Frame = 2
Query: 518 QGRGLCVLFKTSAATAFVGQERDPDEYLDYILLD-MYWYPSGNETTNSTTCVEDGEEWEPHREWVYAFLADPEDVTVVSTAVQLSYSCITSTSTSHVFNSVGIGLTDQIKYAADDVSSYKAVSINSGVYKDQADANITKPYARLSMELKQQFDSWEIITEADPFEFAEILGNIGGFWDLILILWPLFFVAASQPEPYLKPREFAKSVTRTVERASGITKTVANSGPRRRLESMETINETSGASLGDGFREE---PAPWEQQPV 1294
GRG CV+FKTSAAT FVGQERDP EYLDY+ LD MYWYP G NSTTCV DG EW HREWVY FL+DPED +ST LSYSCIT+TS +H+FN++GIGLT+Q K+ DD+SSYKA+ N GV+K+ + N+T PYA LS+E+KQQ DSWEIITE++P+EFAE+ GNIGGFWDL+LILWPL FVA +Q +P+LKPR F KSV R ERA+G+TK +A + P R SM + DGF ++ PA WE QPV
Sbjct: 144 DGRGQCVIFKTSAATTFVGQERDPHEYLDYVHLDQMYWYPGGK-FGNSTTCVVDGVEWADHREWVYGFLSDPEDPAAISTGFPLSYSCITNTSNTHIFNTLGIGLTNQNKFMEDDISSYKALFTNFGVHKNTVNPNVTMPYAHLSLEMKQQADSWEIITESNPYEFAEMFGNIGGFWDLLLILWPLCFVATTQQDPHLKPRTFKKSVIRGAERAAGVTKVIARAAPIRHSSSM------TATPAVDGFEDQEVVPA-WEGQPV 398
BLAST of mRNA_Ecto-sp13_S_contig14696.3587.1 vs. uniprot
Match: A0A6H5JV19_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV19_9PHAE) HSP 1 Score: 301 bits (771), Expect = 1.320e-92 Identity = 157/309 (50.81%), Postives = 199/309 (64.40%), Query Frame = 2
Query: 518 QGRGLCVLFKTSAATAFVGQERDPDEYLDYILLD--------------------------------------------MYWYPSGNETTNSTTCVEDGEEWEPHREWVYAFLADPEDVTVVSTAVQLSYSCITSTSTSHVFNSVGIGLTDQIKYAADDVSSYKAVSINSGVYKDQADANITKPYARLSMELKQQFDSWEIITEADPFEFAEILGNIGGFWDLILILWPLFFVAASQPEPYLKPREFAKSVTRTVERASGITKTVANSGPRRRLESMETINETSGASLGDGF--REEPAPWEQQPVSGAQ 1306
GRG CV+F+TSA T F+GQERDP EYLDY+ LD MYWYP G NSTTCV +G EW HREWVY FL+DPED T +ST LSYSCIT+TS +H+FN++G+GLT+QIK+ +DD+SSYKA+ N GV+K+ + NIT PYA +S+E+KQQ DSWEIITE++P+EFAE+ GNIGGFWDL+LILWPL FVAA+Q +P+LKPR F KS R +R +G+TK VA + P ++ + TS AS DGF +EE W++QP Q
Sbjct: 95 NGRGHCVVFETSAITDFLGQERDPHEYLDYVHLDGILPVGLVANGSLSQHELEPVIGSTVPLSRPCRPDKRMFFADEQMYWYPGGK-FGNSTTCVNEGVEWADHREWVYGFLSDPEDPTAISTGFPLSYSCITNTSNTHIFNTLGVGLTNQIKFMSDDISSYKALFTNFGVHKNAVNPNITMPYAHVSLEMKQQADSWEIITESNPYEFAEMFGNIGGFWDLLLILWPLCFVAATQQDPHLKPRSFTKSAVRGAQRVAGVTKMVARAAP------VKHTSSTSHASAVDGFEDQEEVPAWDRQPAQRQQ 396
BLAST of mRNA_Ecto-sp13_S_contig14696.3587.1 vs. uniprot
Match: D8LMD2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMD2_ECTSI) HSP 1 Score: 225 bits (574), Expect = 4.510e-64 Identity = 109/211 (51.66%), Postives = 157/211 (74.41%), Query Frame = 2
Query: 527 GLCVLFKTSAATAFVGQERDPDEYLDYILLDMYWYPSGNETTNSTTCVEDGEEWEPHREWVYAFLAD---PEDVTVVSTAVQLSYSCITSTSTSHVFNSVGIGLTDQIKYAADDVSSYKAVSINSGVYKDQADANITKPYARLSMELKQQFDSWEIITEADPFEFAEILGNIGGFWDLILILWPLFFVAASQPEPYLKPREFAKSVTRTVE 1150
G CV F+TS + F+GQER+ YLDY+LLDMYWYP G E+ +S TCV +G WEPH EW+Y L D PE +VST +Q+ YSCIT+ S+SH F VG+G+T + + + V++ KA+S+++ +KD+ +A I KPYA+LS++ +Q+ +S E+ITE DPF+ AE+ GN+GGFWDL++++WP+FFVAAS+ +P+LKPR F KSV + +E
Sbjct: 116 GWCVEFETSTISQFLGQERNASYYLDYLLLDMYWYPGGTES-DSNTCVVEG--WEPHSEWMYVKLKDSGYPESG-LVSTGIQVPYSCITNVSSSHSFTYVGMGVTIEERLGEEPVATNKALSVSTATHKDKVNAAIDKPYAQLSLQFQQEPNSLEVITENDPFDLAEMFGNVGGFWDLLMLVWPIFFVAASRQDPHLKPRNFKKSVAKGLE 322
BLAST of mRNA_Ecto-sp13_S_contig14696.3587.1 vs. uniprot
Match: D8LMD1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMD1_ECTSI) HSP 1 Score: 224 bits (571), Expect = 7.960e-63 Identity = 108/210 (51.43%), Postives = 150/210 (71.43%), Query Frame = 2
Query: 512 ILQGRGLCVLFKTSAATAFVGQERDPDEYLDYILLDMYWYPSGNETTNSTTCVEDGEEWEPHREWVYAFLADPEDVTVVSTAVQLSYSCITSTSTSHVFNSVGIGLTDQIKYAADDVSSYKAVSINSGVYKDQADANITKPYARLSMELKQQFDSWEIITEADPFEFAEILGNIGGFWDLILILWPLFFVAASQPEPYLKPREFAKSVTR 1141
+ G CV F+TS T F+ +ERD YLDY+LLDMYWYP G E +S TCV +G W+ H +W+Y FL DPE V ST +Q+ YSCIT+ S+SH F VGIG+T + K + + + KA+S+++ KD+ + I KPYA+LS++ +Q+ +S EIITE DP + AE+ GN+GGFWDL++I+WP+FFVAAS+ +P+LKPR F KSVT+
Sbjct: 185 LTPNNGWCVEFQTSKITRFLDRERDAKYYLDYLLLDMYWYPGGLEA-DSNTCVVEG--WKTHNQWMYVFLNDPESERV-STGIQVPYSCITNVSSSHSFTYVGIGVTIEDKLGQEPIVNNKALSVSTATVKDEVNPAIVKPYAQLSLQFQQEPNSLEIITEVDPLDLAEMFGNVGGFWDLLMIMWPIFFVAASRQDPHLKPRNFTKSVTK 390
BLAST of mRNA_Ecto-sp13_S_contig14696.3587.1 vs. uniprot
Match: A0A6H5JN97_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN97_9PHAE) HSP 1 Score: 222 bits (565), Expect = 8.640e-63 Identity = 108/205 (52.68%), Postives = 150/205 (73.17%), Query Frame = 2
Query: 527 GLCVLFKTSAATAFVGQERDPDEYLDYILLDMYWYPSGNETTNSTTCVEDGEEWEPHREWVYAFLADPEDVTVVSTAVQLSYSCITSTSTSHVFNSVGIGLTDQIKYAADDVSSYKAVSINSGVYKDQADANITKPYARLSMELKQQFDSWEIITEADPFEFAEILGNIGGFWDLILILWPLFFVAASQPEPYLKPREFAKSVTR 1141
G CV F+TS T F+G+ERD +LD++LLDMYWYP G ET +STTCV +G W+ H +W+Y FL DP + VST V + YSCIT+ S+SH F VGIGLT +IK + + S KA+S+++ K + + I KPYA+LS++++Q +S E ITE DP + AE+ GN+GGFWDL++I+WP+FFVAAS+ +P+LKPR F +SVT+
Sbjct: 118 GWCVEFQTSKITRFLGEERDASRFLDHLLLDMYWYPGGLET-DSTTCVIEG--WKTHNQWMYVFLNDPA-LGQVSTRVPVPYSCITNVSSSHSFTYVGIGLTTEIKLGQEPIVSNKALSVSTATVKHEVNPAIVKPYAQLSLQVQQAPNSHECITEVDPLDLAEMFGNVGGFWDLLMIIWPIFFVAASRQDPHLKPRNFKESVTK 318
BLAST of mRNA_Ecto-sp13_S_contig14696.3587.1 vs. uniprot
Match: A0A6H5K474_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K474_9PHAE) HSP 1 Score: 223 bits (567), Expect = 1.310e-62 Identity = 106/210 (50.48%), Postives = 152/210 (72.38%), Query Frame = 2
Query: 512 ILQGRGLCVLFKTSAATAFVGQERDPDEYLDYILLDMYWYPSGNETTNSTTCVEDGEEWEPHREWVYAFLADPEDVTVVSTAVQLSYSCITSTSTSHVFNSVGIGLTDQIKYAADDVSSYKAVSINSGVYKDQADANITKPYARLSMELKQQFDSWEIITEADPFEFAEILGNIGGFWDLILILWPLFFVAASQPEPYLKPREFAKSVTR 1141
+ G CV F+TS T F+G+ERD YLDY+LLDMYWYP G E +STTCV +G W+ H++W+Y FL DP + VST +Q+ YSCIT+ S+SH VGIG+T + K + + + KA+S+++ KD+ + I KPYA+LS++++Q+ +S E+ITE DP + AE+ GN+GGFWDL++I+WP+FFVAAS+ +P+LKPR F KSV +
Sbjct: 153 LTPNNGWCVEFQTSKITRFLGRERDAKYYLDYLLLDMYWYPGGLEV-DSTTCVVEG--WKTHKQWMYVFLNDPV-LGQVSTGIQVPYSCITNVSSSHSHTYVGIGVTTEDKLGQEPIVNNKALSVSTATVKDEVNPAIVKPYAQLSLQVQQEPNSLEVITEVDPLDLAEMFGNVGGFWDLLMIMWPIFFVAASRQDPHLKPRNFKKSVNK 358 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14696.3587.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 23
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig14696.3587.1 >prot_Ecto-sp13_S_contig14696.3587.1 ID=prot_Ecto-sp13_S_contig14696.3587.1|Name=mRNA_Ecto-sp13_S_contig14696.3587.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=316bp MEPCTCSLGPHCVAPKTPITLIAWSLVALGLPILQGRGLCVLFKTSAATAback to top mRNA from alignment at Ecto-sp13_S_contig14696:256..4352- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig14696.3587.1 ID=mRNA_Ecto-sp13_S_contig14696.3587.1|Name=mRNA_Ecto-sp13_S_contig14696.3587.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4097bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14696:256..4352- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig14696:256..4352- >mRNA_Ecto-sp13_S_contig14696.3587.1 ID=mRNA_Ecto-sp13_S_contig14696.3587.1|Name=mRNA_Ecto-sp13_S_contig14696.3587.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=948bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14696:256..4352- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |