prot_Ecto-sp13_S_contig14692.3586.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig14692.3586.1
Unique Nameprot_Ecto-sp13_S_contig14692.3586.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length424
Homology
BLAST of mRNA_Ecto-sp13_S_contig14692.3586.1 vs. uniprot
Match: D7FST2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FST2_ECTSI)

HSP 1 Score: 197 bits (500), Expect = 1.180e-54
Identity = 320/423 (75.65%), Postives = 335/423 (79.20%), Query Frame = 0
Query:    1 TRPSDESDVCLECSAVVTDASFLGCLTNVEAAFGSCEFTEQAACCLNEVSGIDCVSDLATFEFFECLYDLTEPCDVTLTCSGDTTDGGTTPAPAAVSGTDTPVAGGGRGAETLAPTPAG-DXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAETMMPSTAAXXXXXXXXXXXXXXXAAPAADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVMPTTADGDRELDFTPAPSSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPSPAAGXXXXXXXXXXPTASDETTAPTNAAGDVVSESVAPTALEDADDIDTTSGGRGLLSTSVGGVVTGLLAFCTAVVAVV 422
            T+  DES +CL+C+AV+T  SF  CL+ ++A  GSCEFTEQAACCLNEVSGIDCVSDLATFEFFEC+YDL  PCDV+LTCSGDTT     PA                 A+TLAPTPA  DXXXXXXXXXXXXXX        XXXXXXXX   GAETM P   A XXXXXXXXXXXXXX      XXXXXXXXXXXXXXXXXXXXXXXXXX      XXXXXXXXXXXXXXXXXXXXXXXXXAG+G XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX VMPT+ DGDR  D TPAPSSS     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    AAGXXXXXXX   PTASDET APTNAAG+V SESVAPTAL +ADD DTTSGGRGL STSVGGVVTGLLAFCTA VAVV
Sbjct:   40 TQACDESAICLQCTAVITGGSFSDCLSGIDATIGSCEFTEQAACCLNEVSGIDCVSDLATFEFFECVYDLAAPCDVSLTCSGDTT-----PAXXXXXXXXXXXXXXXXXADTLAPTPAAADXXXXXXXXXXXXXXPDDGRPAPXXXXXXXXAAGGAETMSP---AAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAPAADXXXXXXXXXXXXXXXXXXXXXXXXXAGSGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVMPTSGDGDRASDITPAPSSSAGAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----AAGXXXXXXXST-PTASDETMAPTNAAGEVGSESVAPTALGNADDTDTTSGGRGLFSTSVGGVVTGLLAFCTAAVAVV 449          
BLAST of mRNA_Ecto-sp13_S_contig14692.3586.1 vs. uniprot
Match: A0A6H5JRJ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRJ7_9PHAE)

HSP 1 Score: 181 bits (460), Expect = 1.130e-49
Identity = 233/422 (55.21%), Postives = 246/422 (58.29%), Query Frame = 0
Query:    1 TRPSDESDVCLECSAVVTDASFLGCLTNVEAAFGSCEFTEQAACCLNEVSGIDCVSDLATFEFFECLYDLTEPCDVTLTCSGDTTDGGTTPAPAAVSGTDTPVAGGGRGAETLAPTPAGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAETMMPSTAAXXXXXXXXXXXXXXXAAPAADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVMPTTADGDRELDFTPAPSSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPSPAAGXXXXXXXXXXPTASDETTAPTNAAGDVVSESVAPTALEDADDIDTTSGGRGLLSTSVGGVVTGLLAFCTAVVAVV 422
            T+  D SDVC EC AV+TD+SFL CL+ + AA  SCEFTEQAACCLNE+SG DC+SDL T E+F+CLYDL EPCDVTLTC   TT                          T AP P G     XXXXX                        GAETMMP+ +                AAPAADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                                               +MPTT DGDR LD TPAPSSS     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     AGXXXXXXXX   TASDETTAP NAAG+V S SVAPTAL DADDIDTTSGGRGL STSVGGVVTGLLAFCTAVVAVV
Sbjct:   38 TQACDSSDVCPECIAVLTDSSFLDCLSGINAALDSCEFTEQAACCLNEISGTDCLSDLPTLEYFDCLYDLAEPCDVTLTC---TTPXXXXXXXXXXXXXXXXXXXXRPSGPTAAPAPGGPGTSAXXXXX------------------------GAETMMPTVSGDGGMPGAPSDTTAPAAAPAADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGT-------------------------------------------------------------MMPTTGDGDRALDITPAPSSSAGAAIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---GAGXXXXXXXX---TASDETTAPPNAAGEVGSTSVAPTALGDADDIDTTSGGRGLFSTSVGGVVTGLLAFCTAVVAVV 365          
BLAST of mRNA_Ecto-sp13_S_contig14692.3586.1 vs. uniprot
Match: D7FST4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FST4_ECTSI)

HSP 1 Score: 147 bits (372), Expect = 1.030e-36
Identity = 80/112 (71.43%), Postives = 87/112 (77.68%), Query Frame = 0
Query:    6 ESDVCLECSAVVTDASFLGCLTNVEAAFGSCEFTEQAACCLNEVSGIDCVSDLATFEFFECLYDLTEPCDVTLTCSGDTTDGG-TTPAPA-AVSGTDTPVAGGGRGAETLAP 115
            ESDVCLEC++  +  SFL CL  + A FGSCE+ EQ ACCLNEVSGIDCVSD  TFEFFECLYD TE CD   TC+GDTT+GG TTPAPA A SGTDTPVAGG   AET AP
Sbjct:   42 ESDVCLECTSFTSGDSFLDCLAGIGAEFGSCEYVEQQACCLNEVSGIDCVSDPVTFEFFECLYDPTEACDGGWTCNGDTTNGGDTTPAPAPAASGTDTPVAGGXXXAETAAP 153          
BLAST of mRNA_Ecto-sp13_S_contig14692.3586.1 vs. uniprot
Match: A0A6H5K7K6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7K6_9PHAE)

HSP 1 Score: 139 bits (351), Expect = 4.040e-35
Identity = 76/113 (67.26%), Postives = 83/113 (73.45%), Query Frame = 0
Query:    4 SDESDVCLECSAVVTDASFLGCLTNVEAAFGSCEFTEQAACCLNEVSGIDCVSDLATFEFFECLYDLTEPCDVTLTCSGDTTDGG-TTPAPAAVSGTDTPVAGGGRGAETLAP 115
            S ESDVC EC+   +  SF+ CL  + A  GSCE+TEQ ACCLNEVSGIDC+SD  TFEFFE  YD TE CD   TCSGD T+GG TTPAPAA  GTDTPVAG G GAET AP
Sbjct:   17 SVESDVCTECTFFTSGNSFVDCLAGIGAEIGSCEYTEQLACCLNEVSGIDCLSDPVTFEFFEYFYDPTEACDGGWTCSGDITNGGDTTPAPAAAFGTDTPVAGRGGGAETTAP 129          
BLAST of mRNA_Ecto-sp13_S_contig14692.3586.1 vs. uniprot
Match: D7FST5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FST5_ECTSI)

HSP 1 Score: 67.8 bits (164), Expect = 1.210e-8
Identity = 38/98 (38.78%), Postives = 49/98 (50.00%), Query Frame = 0
Query:    6 ESDVCLECSAVVTDASFLGCLTN--VEAAFGSCEFTEQAACCLNEVSGIDCVSDLATFEFFECLYDLTEPCDVTLTCSGDTTDG--------GTTPAP 93
            ES+ C          +F  CL N  +     SC+  E+ ACC NE SG+DC++D  TF   ECLYD    C+   TCSG +  G        G+TPAP
Sbjct:   47 ESETCAAXXXXXXSEAFFTCLDNLPIPTTDDSCDSNEEFACCFNEASGLDCINDPTTFALMECLYDDANQCEENWTCSGSSGGGDPSTTSASGSTPAP 144          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14692.3586.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FST2_ECTSI1.180e-5475.65Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JRJ7_9PHAE1.130e-4955.21Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FST4_ECTSI1.030e-3671.43Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K7K6_9PHAE4.040e-3567.26Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FST5_ECTSI1.210e-838.78Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 423..423
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..398
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 399..422
NoneNo IPR availableTMHMMTMhelixcoord: 400..422

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig14692contigEcto-sp13_S_contig14692:648..1955 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig14692.3586.1mRNA_Ecto-sp13_S_contig14692.3586.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig14692 648..1955 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig14692.3586.1 ID=prot_Ecto-sp13_S_contig14692.3586.1|Name=mRNA_Ecto-sp13_S_contig14692.3586.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=424bp
TRPSDESDVCLECSAVVTDASFLGCLTNVEAAFGSCEFTEQAACCLNEVS
GIDCVSDLATFEFFECLYDLTEPCDVTLTCSGDTTDGGTTPAPAAVSGTD
TPVAGGGRGAETLAPTPAGDGGGSGPSAPTAAPAPDGGRPAPPSETSAPA
GAGGAETMMPSTAADGGMPVAPSDTSAPAAAPAADGAETMMPSAAADGGI
PGAPSDTTAPAAAPAANGAETMMPTVAADGGRPGAPSDTTAPAGAGGAET
MMPSAAAEGGMPGAPSDTTAPAASGGAEGTVMPTTADGDRELDFTPAPSS
SAGADGGMPGAPSDTTAPAAAGGVEGTMMPTTADGDRELDTPSPAAGGGG
GGGGGSAPTASDETTAPTNAAGDVVSESVAPTALEDADDIDTTSGGRGLL
STSVGGVVTGLLAFCTAVVAVVL*
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