prot_Ecto-sp13_S_contig14681.3580.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig14681.3580.1
Unique Nameprot_Ecto-sp13_S_contig14681.3580.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length198
Homology
BLAST of mRNA_Ecto-sp13_S_contig14681.3580.1 vs. uniprot
Match: A0A6H5KPD3_9PHAE (Aa_trans domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KPD3_9PHAE)

HSP 1 Score: 371 bits (953), Expect = 1.880e-124
Identity = 190/193 (98.45%), Postives = 192/193 (99.48%), Query Frame = 0
Query:    2 GGVLGYNTAAGVVSGVFGELSSRVRRNPKGGIVSQHVHEEDPHGDMSVSTAILNIVADLCPHGMLPVAYGMAAVGGTGLAVAPALLASFGIISAYTMISVGRACQRTKRWSFSGLWTDLVGKKSAWVVELAMALMTFGCCIFYLAFAGDLFSALAGTVSSLPEVLKKRAVDLAILGLCPLLPLCLMKNLSALQ 194
            GGVLGYNTAAGVVSGVFGELSSRVRRNPKGGIV+QHVHEEDPHGDMSVSTAILNIVADLCPHGMLPVAYGMAAVGGTGLAVAPALLASFGIISAYTMISVGRACQRTKRWSFSGLWTDLVGK+SAWVVELAMALMTFGCCIFYLAFAGDLFSALAGTVSSLPEVLKKRAVDL ILGLCPLLPLCLMKNLSALQ
Sbjct:   86 GGVLGYNTAAGVVSGVFGELSSRVRRNPKGGIVNQHVHEEDPHGDMSVSTAILNIVADLCPHGMLPVAYGMAAVGGTGLAVAPALLASFGIISAYTMISVGRACQRTKRWSFSGLWTDLVGKRSAWVVELAMALMTFGCCIFYLAFAGDLFSALAGTVSSLPEVLKKRAVDLVILGLCPLLPLCLMKNLSALQ 278          
BLAST of mRNA_Ecto-sp13_S_contig14681.3580.1 vs. uniprot
Match: A0A835YIC2_9STRA (Transmembrane amino acid transporter protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIC2_9STRA)

HSP 1 Score: 181 bits (459), Expect = 8.180e-52
Identity = 93/148 (62.84%), Postives = 114/148 (77.03%), Query Frame = 0
Query:   47 MSVSTAILNIVADLCPHGMLPVAYGMAAVGGTGLAVAPALLASFGIISAYTMISVGRACQRTKRWSFSGLWTDLVGKKSAWVVELAMALMTFGCCIFYLAFAGDLFSALAGTVSSLPEVLKKRAVDLAILGLCPLLPLCLMKNLSALQ 194
            M +STAILN+V DLC HGMLPVA+G+AA GGTGL  A +++A FG+ISAYT++S+GRA Q T  ++FSGLW  L+   SAWV+E+A A+MTFGCCIFY AF GDLFS+LA     +P  LK R   L  LG+ PLLPLCL+KNLSALQ
Sbjct:    1 MPLSTAILNLVTDLCAHGMLPVAFGIAAGGGTGLLTATSIIAVFGLISAYTLVSLGRAAQLTGEYTFSGLWGTLISPGSAWVIEVAFAVMTFGCCIFYSAFIGDLFSSLAQASDIVPAFLKPRWAVLCALGVFPLLPLCLLKNLSALQ 148          
BLAST of mRNA_Ecto-sp13_S_contig14681.3580.1 vs. uniprot
Match: A0A7S3XLX7_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XLX7_HETAK)

HSP 1 Score: 167 bits (423), Expect = 1.360e-45
Identity = 84/151 (55.63%), Postives = 113/151 (74.83%), Query Frame = 0
Query:   43 PHGDMSVSTAILNIVADLCPHGMLPVAYGMAAVGGTGLAVAPALLASFGIISAYTMISVGRACQRTKRWSFSGLWTDLVGKKSAWVVELAMALMTFGCCIFYLAFAGDLFSALAGTVSSLPEVLKKRAVDLAILGLCPLLPLCLMKNLSAL 193
            PHG MS + A L +VADLCPHGMLP+A+G+AA GGTGL  A  LLA F  +SAYT++S+GRA Q T++ + SG+W + VG +S WV + AMAL+ +GCC+FY AF GD+F ALA + + LP  L++R + L  L L P+LPLCL+++LSAL
Sbjct:  145 PHGHMSTAAATLAMVADLCPHGMLPLAFGIAAGGGTGLGTAAGLLAGFAALSAYTLVSLGRAAQATQQATLSGVWAETVGPQSTWVPDGAMALLCYGCCVFYSAFVGDIFGALA-SAAGLPAALRQRWLVLLALSLFPILPLCLLRDLSAL 294          
BLAST of mRNA_Ecto-sp13_S_contig14681.3580.1 vs. uniprot
Match: A0A4D9DBF3_9STRA (Aa_trans domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DBF3_9STRA)

HSP 1 Score: 159 bits (403), Expect = 3.960e-43
Identity = 81/153 (52.94%), Postives = 110/153 (71.90%), Query Frame = 0
Query:   42 DPHGDMSVSTAILNIVADLCPHGMLPVAYGMAAVGGTGLAVAPALLASFGIISAYTMISVGRACQRTKRWSFSGLWTDLVGKKSAWVVELAMALMTFGCCIFYLAFAGDLFSALAGTVSSLPEVLKKRAVDLAILGLCPLLPLCLMKNLSALQ 194
            + H  +SV++  +NI+ADLCPHGMLP+A+GMA+ GGTGL  A +LL  FG +SAYT+IS+ RAC+ T  +SF G+W+  +   +AW+++  +  + FGCCIFY AF GDL +ALA  + + P VL KR + L  L + PL PLCLMKNLSALQ
Sbjct:   43 EAHHGLSVTSLAINIMADLCPHGMLPLAFGMASEGGTGLVPALSLLVLFGSLSAYTLISIARACEATGEYSFRGIWSRTLHPSTAWIIDAGITFLCFGCCIFYSAFIGDLSAALAQALGA-PAVLHKRWLCLVALHIFPLWPLCLMKNLSALQ 194          
BLAST of mRNA_Ecto-sp13_S_contig14681.3580.1 vs. uniprot
Match: W7TM90_9STRA (Pentatricopeptide repeat containing protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TM90_9STRA)

HSP 1 Score: 159 bits (403), Expect = 1.090e-41
Identity = 81/153 (52.94%), Postives = 110/153 (71.90%), Query Frame = 0
Query:   42 DPHGDMSVSTAILNIVADLCPHGMLPVAYGMAAVGGTGLAVAPALLASFGIISAYTMISVGRACQRTKRWSFSGLWTDLVGKKSAWVVELAMALMTFGCCIFYLAFAGDLFSALAGTVSSLPEVLKKRAVDLAILGLCPLLPLCLMKNLSALQ 194
            + H  +SV++  +NI+ADLCPHGMLP+A+GMA+ GGTGL  A +LL  FG +SAYT+IS+ RAC+ T  +SF G+W+  +   +AW+++  +  + FGCCIFY AF GDL +ALA  + + P VL KR + L  L + PL PLCLMKNLSALQ
Sbjct: 1142 EAHHGLSVTSLAINIMADLCPHGMLPLAFGMASEGGTGLVPALSLLVLFGSLSAYTLISIARACEATGEYSFRGIWSRTLHPSTAWIIDAGITFLCFGCCIFYSAFIGDLSAALAQALGA-PAVLHKRWLCLVALHIFPLWPLCLMKNLSALQ 1293          
BLAST of mRNA_Ecto-sp13_S_contig14681.3580.1 vs. uniprot
Match: A0A7S2V5G6_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V5G6_9STRA)

HSP 1 Score: 149 bits (377), Expect = 4.990e-39
Identity = 75/165 (45.45%), Postives = 111/165 (67.27%), Query Frame = 0
Query:   30 KGGIVSQHVHEEDPHGDMSVSTAILNIVADLCPHGMLPVAYGMAAVGGTGLAVAPALLASFGIISAYTMISVGRACQRTKRWSFSGLWTDLVGKKSAWVVELAMALMTFGCCIFYLAFAGDLFSALAGTVSSLPEVLKKRAVDLAILGLCPLLPLCLMKNLSALQ 194
            +GG   +     +   +MSVS+ ++N++ DLCP G++P++YG+AA GGTGLA++  LL  FG IS YTM+ +GRAC+ T   S  G+W   VGK + WVV+  ++L+ FGCC+F+ AF GDLF+ALA  +   P  L+ R + L +  L  +LPLCLM++LS L+
Sbjct:   89 RGGGKKEPKSPPEESSEMSVSSGVINLIVDLCPSGIMPLSYGIAAGGGTGLALSTVLLVVFGTISTYTMLCIGRACEMTGEKSLRGVWEVAVGKSTGWVVDACVSLLCFGCCVFFSAFIGDLFAALAAALQ-FPSQLQVRWLVLGLTSLAVILPLCLMEDLSTLK 252          
BLAST of mRNA_Ecto-sp13_S_contig14681.3580.1 vs. uniprot
Match: A0A7S1UC63_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UC63_9STRA)

HSP 1 Score: 144 bits (363), Expect = 7.650e-38
Identity = 82/150 (54.67%), Postives = 102/150 (68.00%), Query Frame = 0
Query:   44 HGDMSVSTAILNIVADLCPHGMLPVAYGMAAVGGTGLAVAPALLASFGIISAYTMISVGRACQRTKRWSFSGLWTDLVGKKSAWVVELAMALMTFGCCIFYLAFAGDLFSALAGTVSSLPEVLKKRAVDLAILGLCPLLPLCLMKNLSAL 193
            H  MS    +LN++ADLCPHGML +A+GMAA GGTG   A ALLA FG +S YTM S+ RA + T++ S  G+WTDLVG++SA  VE  + L+ +GCC+FY AF GDLF +L+  V  LP    KR   L  L   PLLPLCL+KNLS L
Sbjct:    1 HDHMSAPVLVLNLLADLCPHGMLMLAFGMAAHGGTGAVPAVALLAGFGAVSVYTMWSLARASEETQQASLMGVWTDLVGERSAVYVEGIVTLLCYGCCVFYAAFIGDLFHSLSMRVG-LPF---KRFQVLGGLSAVPLLPLCLLKNLSVL 146          
BLAST of mRNA_Ecto-sp13_S_contig14681.3580.1 vs. uniprot
Match: B7FRQ8_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FRQ8_PHATC)

HSP 1 Score: 131 bits (329), Expect = 2.760e-32
Identity = 79/181 (43.65%), Postives = 107/181 (59.12%), Query Frame = 0
Query:   29 PKGG--IVSQHVHEEDPHGD--MSVSTAILNIVADLCPHGMLPVAYGMAAVGGTGLAVAPALLASFGIISAYTMISVGRAC---------QRTKRWSFSGLWTDLV--GKKSAWVVELAMALMTFGCCIFYLAFAGDLFSALAGTVSSLPEVLKKRAVDLAILGLCPLLPLCLMKNLSALQ 194
            PKG   +  +HV     H D  MS  TA+ N++ADLCPHGMLP+AYGMAA GGTG  +A A+L  FG +S Y+++S  RA          +     S S +W   V  GK + ++ ++    +T GC +FY AF GD+F +L   V  LP VL+KR   L +L   P+LPLCL K+LSAL+
Sbjct:   58 PKGKRVLTKKHVATSVGHDDELMSSPTAVANVLADLCPHGMLPIAYGMAAAGGTGPVLATAVLVVFGALSWYSLVSFARAADVVLVQSKEEHAAGESLSAVWERTVPNGKLTTYIPDVGCVFLTVGCLLFYSAFIGDIFGSLVSGVKGLPSVLQKRWPVLLLLHAVPILPLCLKKDLSALK 238          
BLAST of mRNA_Ecto-sp13_S_contig14681.3580.1 vs. uniprot
Match: A0A1Z5K500_FISSO (Aa_trans domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K500_FISSO)

HSP 1 Score: 127 bits (320), Expect = 3.780e-31
Identity = 78/197 (39.59%), Postives = 109/197 (55.33%), Query Frame = 0
Query:   13 VVSGVFGELSSRVRRNPKGG-------IVSQHVHEEDPHGDMSVSTAILNIVADLCPHGMLPVAYGMAAVGGTGLAVAPALLASFGIISAYTMISVGRACQRT--------KRWSFSGLWTDLVGKKSAWVVELAMALMTFGCCIFYLAFAGDLFSALAGTVSSLPEVLKKRAVDLAILGLCPLLPLCLMKNLSALQ 194
            + S V  EL     +N K         I   H HE      MS   A+ N++ADLCPHGMLP+AYGMAA GGTG  +A  +L  FG +S Y++++  RA   T           S S +W   VG ++ ++ +L    +T GC +FY AF GD+F +L   + SLP +L+KR   L +L   P+LPLCL ++LS+LQ
Sbjct:   23 ITSSVVVELRGGFNKNVKKAPIVKAKTIAKNHHHEAHL---MSAPVAVANVLADLCPHGMLPIAYGMAAGGGTGPVLATLILLVFGFLSWYSLVTWARAADATLCREKPVVMAESLSEVWERTVGPQTKFIPDLGCVALTLGCLLFYSAFLGDIFGSLVSGLPSLPPILRKRWTVLLLLHAVPVLPLCLAEDLSSLQ 216          
BLAST of mRNA_Ecto-sp13_S_contig14681.3580.1 vs. uniprot
Match: A0A482SY67_9ARCH (Aa_trans domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SY67_9ARCH)

HSP 1 Score: 120 bits (302), Expect = 1.990e-28
Identity = 68/174 (39.08%), Postives = 107/174 (61.49%), Query Frame = 0
Query:   22 SSRVRRNPKGGIVSQHVHEEDPHGDMSVSTAILNIVADLCPHGMLPVAYGMAAVGGTGLAVAPALLASFGIISAYTMISVGRACQRTKRWSFSGLWTDLVGKKSAWVVELAMALMTFGCCIFYLAFAGDLFSALAGTVSSLPEVLKKRAVDLAILGLCPLLPLCLMKNLSALQV 195
            +++++ +P  G  S  +     H  +S +T ++NIVADLCPHGMLP+AYG A+ G  GL  +  LLA F  +S Y+M +     Q T   + + +W+ L   ++ ++V+LA+  + +GCC+FY AFAGD+F+AL   ++ L  +L  R   L ++    LLPLCL ++LS LQV
Sbjct:   83 AAQIQSDPTFGKQSTLIASGKEHHGISFTTLVINIVADLCPHGMLPLAYGFASGGPNGLVPSVLLLALFATMSGYSMTAFASLAQHTNSSTIAEIWSKLFNPQTKFLVDLAIFGLCYGCCVFYSAFAGDIFAALTLALN-LKNLLPHRWNTLLLISTTVLLPLCLTEDLSGLQV 255          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14681.3580.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 21
Match NameE-valueIdentityDescription
A0A6H5KPD3_9PHAE1.880e-12498.45Aa_trans domain-containing protein n=2 Tax=Ectocar... [more]
A0A835YIC2_9STRA8.180e-5262.84Transmembrane amino acid transporter protein-domai... [more]
A0A7S3XLX7_HETAK1.360e-4555.63Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A4D9DBF3_9STRA3.960e-4352.94Aa_trans domain-containing protein n=1 Tax=Nannoch... [more]
W7TM90_9STRA1.090e-4152.94Pentatricopeptide repeat containing protein n=1 Ta... [more]
A0A7S2V5G6_9STRA4.990e-3945.45Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S1UC63_9STRA7.650e-3854.67Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
B7FRQ8_PHATC2.760e-3243.65Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
A0A1Z5K500_FISSO3.780e-3139.59Aa_trans domain-containing protein n=2 Tax=Fistuli... [more]
A0A482SY67_9ARCH1.990e-2839.08Aa_trans domain-containing protein n=1 Tax=archaeo... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013057Amino acid transporter, transmembrane domainPFAMPF01490Aa_transcoord: 47..194
e-value: 4.8E-15
score: 55.2
NoneNo IPR availablePANTHERPTHR22950:SF458SODIUM-COUPLED NEUTRAL AMINO ACID TRANSPORTER 10-RELATEDcoord: 41..194
NoneNo IPR availablePANTHERPTHR22950AMINO ACID TRANSPORTERcoord: 41..194
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 150..168
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 169..187
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 106..125
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 81..105
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 188..197
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 126..149
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..80
NoneNo IPR availableTMHMMTMhelixcoord: 170..192
NoneNo IPR availableTMHMMTMhelixcoord: 126..148
NoneNo IPR availableTMHMMTMhelixcoord: 80..102

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig14681contigEcto-sp13_S_contig14681:771..4119 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig14681.3580.1mRNA_Ecto-sp13_S_contig14681.3580.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig14681 771..4119 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig14681.3580.1 ID=prot_Ecto-sp13_S_contig14681.3580.1|Name=mRNA_Ecto-sp13_S_contig14681.3580.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=198bp
RGGVLGYNTAAGVVSGVFGELSSRVRRNPKGGIVSQHVHEEDPHGDMSVS
TAILNIVADLCPHGMLPVAYGMAAVGGTGLAVAPALLASFGIISAYTMIS
VGRACQRTKRWSFSGLWTDLVGKKSAWVVELAMALMTFGCCIFYLAFAGD
LFSALAGTVSSLPEVLKKRAVDLAILGLCPLLPLCLMKNLSALQVQQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013057AA_transpt_TM