mRNA_Ecto-sp13_S_contig14681.3580.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig14681.3580.1 vs. uniprot
Match: A0A6H5KPD3_9PHAE (Aa_trans domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KPD3_9PHAE) HSP 1 Score: 371 bits (953), Expect = 1.880e-124 Identity = 190/193 (98.45%), Postives = 192/193 (99.48%), Query Frame = 1
Query: 4 GGVLGYNTAAGVVSGVFGELSSRVRRNPKGGIVSQHVHEEDPHGDMSVSTAILNIVADLCPHGMLPVAYGMAAVGGTGLAVAPALLASFGIISAYTMISVGRACQRTKRWSFSGLWTDLVGKKSAWVVELAMALMTFGCCIFYLAFAGDLFSALAGTVSSLPEVLKKRAVDLAILGLCPLLPLCLMKNLSALQ 582
GGVLGYNTAAGVVSGVFGELSSRVRRNPKGGIV+QHVHEEDPHGDMSVSTAILNIVADLCPHGMLPVAYGMAAVGGTGLAVAPALLASFGIISAYTMISVGRACQRTKRWSFSGLWTDLVGK+SAWVVELAMALMTFGCCIFYLAFAGDLFSALAGTVSSLPEVLKKRAVDL ILGLCPLLPLCLMKNLSALQ
Sbjct: 86 GGVLGYNTAAGVVSGVFGELSSRVRRNPKGGIVNQHVHEEDPHGDMSVSTAILNIVADLCPHGMLPVAYGMAAVGGTGLAVAPALLASFGIISAYTMISVGRACQRTKRWSFSGLWTDLVGKRSAWVVELAMALMTFGCCIFYLAFAGDLFSALAGTVSSLPEVLKKRAVDLVILGLCPLLPLCLMKNLSALQ 278
BLAST of mRNA_Ecto-sp13_S_contig14681.3580.1 vs. uniprot
Match: A0A835YIC2_9STRA (Transmembrane amino acid transporter protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIC2_9STRA) HSP 1 Score: 181 bits (459), Expect = 8.180e-52 Identity = 93/148 (62.84%), Postives = 114/148 (77.03%), Query Frame = 1
Query: 139 MSVSTAILNIVADLCPHGMLPVAYGMAAVGGTGLAVAPALLASFGIISAYTMISVGRACQRTKRWSFSGLWTDLVGKKSAWVVELAMALMTFGCCIFYLAFAGDLFSALAGTVSSLPEVLKKRAVDLAILGLCPLLPLCLMKNLSALQ 582
M +STAILN+V DLC HGMLPVA+G+AA GGTGL A +++A FG+ISAYT++S+GRA Q T ++FSGLW L+ SAWV+E+A A+MTFGCCIFY AF GDLFS+LA +P LK R L LG+ PLLPLCL+KNLSALQ
Sbjct: 1 MPLSTAILNLVTDLCAHGMLPVAFGIAAGGGTGLLTATSIIAVFGLISAYTLVSLGRAAQLTGEYTFSGLWGTLISPGSAWVIEVAFAVMTFGCCIFYSAFIGDLFSSLAQASDIVPAFLKPRWAVLCALGVFPLLPLCLLKNLSALQ 148
BLAST of mRNA_Ecto-sp13_S_contig14681.3580.1 vs. uniprot
Match: A0A7S3XLX7_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XLX7_HETAK) HSP 1 Score: 167 bits (423), Expect = 1.360e-45 Identity = 84/151 (55.63%), Postives = 113/151 (74.83%), Query Frame = 1
Query: 127 PHGDMSVSTAILNIVADLCPHGMLPVAYGMAAVGGTGLAVAPALLASFGIISAYTMISVGRACQRTKRWSFSGLWTDLVGKKSAWVVELAMALMTFGCCIFYLAFAGDLFSALAGTVSSLPEVLKKRAVDLAILGLCPLLPLCLMKNLSAL 579
PHG MS + A L +VADLCPHGMLP+A+G+AA GGTGL A LLA F +SAYT++S+GRA Q T++ + SG+W + VG +S WV + AMAL+ +GCC+FY AF GD+F ALA + + LP L++R + L L L P+LPLCL+++LSAL
Sbjct: 145 PHGHMSTAAATLAMVADLCPHGMLPLAFGIAAGGGTGLGTAAGLLAGFAALSAYTLVSLGRAAQATQQATLSGVWAETVGPQSTWVPDGAMALLCYGCCVFYSAFVGDIFGALA-SAAGLPAALRQRWLVLLALSLFPILPLCLLRDLSAL 294
BLAST of mRNA_Ecto-sp13_S_contig14681.3580.1 vs. uniprot
Match: A0A4D9DBF3_9STRA (Aa_trans domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DBF3_9STRA) HSP 1 Score: 159 bits (403), Expect = 3.960e-43 Identity = 81/153 (52.94%), Postives = 110/153 (71.90%), Query Frame = 1
Query: 124 DPHGDMSVSTAILNIVADLCPHGMLPVAYGMAAVGGTGLAVAPALLASFGIISAYTMISVGRACQRTKRWSFSGLWTDLVGKKSAWVVELAMALMTFGCCIFYLAFAGDLFSALAGTVSSLPEVLKKRAVDLAILGLCPLLPLCLMKNLSALQ 582
+ H +SV++ +NI+ADLCPHGMLP+A+GMA+ GGTGL A +LL FG +SAYT+IS+ RAC+ T +SF G+W+ + +AW+++ + + FGCCIFY AF GDL +ALA + + P VL KR + L L + PL PLCLMKNLSALQ
Sbjct: 43 EAHHGLSVTSLAINIMADLCPHGMLPLAFGMASEGGTGLVPALSLLVLFGSLSAYTLISIARACEATGEYSFRGIWSRTLHPSTAWIIDAGITFLCFGCCIFYSAFIGDLSAALAQALGA-PAVLHKRWLCLVALHIFPLWPLCLMKNLSALQ 194
BLAST of mRNA_Ecto-sp13_S_contig14681.3580.1 vs. uniprot
Match: W7TM90_9STRA (Pentatricopeptide repeat containing protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TM90_9STRA) HSP 1 Score: 159 bits (403), Expect = 1.090e-41 Identity = 81/153 (52.94%), Postives = 110/153 (71.90%), Query Frame = 1
Query: 124 DPHGDMSVSTAILNIVADLCPHGMLPVAYGMAAVGGTGLAVAPALLASFGIISAYTMISVGRACQRTKRWSFSGLWTDLVGKKSAWVVELAMALMTFGCCIFYLAFAGDLFSALAGTVSSLPEVLKKRAVDLAILGLCPLLPLCLMKNLSALQ 582
+ H +SV++ +NI+ADLCPHGMLP+A+GMA+ GGTGL A +LL FG +SAYT+IS+ RAC+ T +SF G+W+ + +AW+++ + + FGCCIFY AF GDL +ALA + + P VL KR + L L + PL PLCLMKNLSALQ
Sbjct: 1142 EAHHGLSVTSLAINIMADLCPHGMLPLAFGMASEGGTGLVPALSLLVLFGSLSAYTLISIARACEATGEYSFRGIWSRTLHPSTAWIIDAGITFLCFGCCIFYSAFIGDLSAALAQALGA-PAVLHKRWLCLVALHIFPLWPLCLMKNLSALQ 1293
BLAST of mRNA_Ecto-sp13_S_contig14681.3580.1 vs. uniprot
Match: A0A7S2V5G6_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V5G6_9STRA) HSP 1 Score: 149 bits (377), Expect = 4.990e-39 Identity = 75/165 (45.45%), Postives = 111/165 (67.27%), Query Frame = 1
Query: 88 KGGIVSQHVHEEDPHGDMSVSTAILNIVADLCPHGMLPVAYGMAAVGGTGLAVAPALLASFGIISAYTMISVGRACQRTKRWSFSGLWTDLVGKKSAWVVELAMALMTFGCCIFYLAFAGDLFSALAGTVSSLPEVLKKRAVDLAILGLCPLLPLCLMKNLSALQ 582
+GG + + +MSVS+ ++N++ DLCP G++P++YG+AA GGTGLA++ LL FG IS YTM+ +GRAC+ T S G+W VGK + WVV+ ++L+ FGCC+F+ AF GDLF+ALA + P L+ R + L + L +LPLCLM++LS L+
Sbjct: 89 RGGGKKEPKSPPEESSEMSVSSGVINLIVDLCPSGIMPLSYGIAAGGGTGLALSTVLLVVFGTISTYTMLCIGRACEMTGEKSLRGVWEVAVGKSTGWVVDACVSLLCFGCCVFFSAFIGDLFAALAAALQ-FPSQLQVRWLVLGLTSLAVILPLCLMEDLSTLK 252
BLAST of mRNA_Ecto-sp13_S_contig14681.3580.1 vs. uniprot
Match: A0A7S1UC63_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UC63_9STRA) HSP 1 Score: 144 bits (363), Expect = 7.650e-38 Identity = 82/150 (54.67%), Postives = 102/150 (68.00%), Query Frame = 1
Query: 130 HGDMSVSTAILNIVADLCPHGMLPVAYGMAAVGGTGLAVAPALLASFGIISAYTMISVGRACQRTKRWSFSGLWTDLVGKKSAWVVELAMALMTFGCCIFYLAFAGDLFSALAGTVSSLPEVLKKRAVDLAILGLCPLLPLCLMKNLSAL 579
H MS +LN++ADLCPHGML +A+GMAA GGTG A ALLA FG +S YTM S+ RA + T++ S G+WTDLVG++SA VE + L+ +GCC+FY AF GDLF +L+ V LP KR L L PLLPLCL+KNLS L
Sbjct: 1 HDHMSAPVLVLNLLADLCPHGMLMLAFGMAAHGGTGAVPAVALLAGFGAVSVYTMWSLARASEETQQASLMGVWTDLVGERSAVYVEGIVTLLCYGCCVFYAAFIGDLFHSLSMRVG-LPF---KRFQVLGGLSAVPLLPLCLLKNLSVL 146
BLAST of mRNA_Ecto-sp13_S_contig14681.3580.1 vs. uniprot
Match: B7FRQ8_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FRQ8_PHATC) HSP 1 Score: 131 bits (329), Expect = 2.760e-32 Identity = 79/181 (43.65%), Postives = 107/181 (59.12%), Query Frame = 1
Query: 85 PKGG--IVSQHVHEEDPHGD--MSVSTAILNIVADLCPHGMLPVAYGMAAVGGTGLAVAPALLASFGIISAYTMISVGRAC---------QRTKRWSFSGLWTDLV--GKKSAWVVELAMALMTFGCCIFYLAFAGDLFSALAGTVSSLPEVLKKRAVDLAILGLCPLLPLCLMKNLSALQ 582
PKG + +HV H D MS TA+ N++ADLCPHGMLP+AYGMAA GGTG +A A+L FG +S Y+++S RA + S S +W V GK + ++ ++ +T GC +FY AF GD+F +L V LP VL+KR L +L P+LPLCL K+LSAL+
Sbjct: 58 PKGKRVLTKKHVATSVGHDDELMSSPTAVANVLADLCPHGMLPIAYGMAAAGGTGPVLATAVLVVFGALSWYSLVSFARAADVVLVQSKEEHAAGESLSAVWERTVPNGKLTTYIPDVGCVFLTVGCLLFYSAFIGDIFGSLVSGVKGLPSVLQKRWPVLLLLHAVPILPLCLKKDLSALK 238
BLAST of mRNA_Ecto-sp13_S_contig14681.3580.1 vs. uniprot
Match: A0A1Z5K500_FISSO (Aa_trans domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K500_FISSO) HSP 1 Score: 127 bits (320), Expect = 3.780e-31 Identity = 78/197 (39.59%), Postives = 109/197 (55.33%), Query Frame = 1
Query: 37 VVSGVFGELSSRVRRNPKGG-------IVSQHVHEEDPHGDMSVSTAILNIVADLCPHGMLPVAYGMAAVGGTGLAVAPALLASFGIISAYTMISVGRACQRT--------KRWSFSGLWTDLVGKKSAWVVELAMALMTFGCCIFYLAFAGDLFSALAGTVSSLPEVLKKRAVDLAILGLCPLLPLCLMKNLSALQ 582
+ S V EL +N K I H HE MS A+ N++ADLCPHGMLP+AYGMAA GGTG +A +L FG +S Y++++ RA T S S +W VG ++ ++ +L +T GC +FY AF GD+F +L + SLP +L+KR L +L P+LPLCL ++LS+LQ
Sbjct: 23 ITSSVVVELRGGFNKNVKKAPIVKAKTIAKNHHHEAHL---MSAPVAVANVLADLCPHGMLPIAYGMAAGGGTGPVLATLILLVFGFLSWYSLVTWARAADATLCREKPVVMAESLSEVWERTVGPQTKFIPDLGCVALTLGCLLFYSAFLGDIFGSLVSGLPSLPPILRKRWTVLLLLHAVPVLPLCLAEDLSSLQ 216
BLAST of mRNA_Ecto-sp13_S_contig14681.3580.1 vs. uniprot
Match: A0A482SY67_9ARCH (Aa_trans domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SY67_9ARCH) HSP 1 Score: 120 bits (302), Expect = 1.990e-28 Identity = 68/174 (39.08%), Postives = 107/174 (61.49%), Query Frame = 1
Query: 64 SSRVRRNPKGGIVSQHVHEEDPHGDMSVSTAILNIVADLCPHGMLPVAYGMAAVGGTGLAVAPALLASFGIISAYTMISVGRACQRTKRWSFSGLWTDLVGKKSAWVVELAMALMTFGCCIFYLAFAGDLFSALAGTVSSLPEVLKKRAVDLAILGLCPLLPLCLMKNLSALQV 585
+++++ +P G S + H +S +T ++NIVADLCPHGMLP+AYG A+ G GL + LLA F +S Y+M + Q T + + +W+ L ++ ++V+LA+ + +GCC+FY AFAGD+F+AL ++ L +L R L ++ LLPLCL ++LS LQV
Sbjct: 83 AAQIQSDPTFGKQSTLIASGKEHHGISFTTLVINIVADLCPHGMLPLAYGFASGGPNGLVPSVLLLALFATMSGYSMTAFASLAQHTNSSTIAEIWSKLFNPQTKFLVDLAIFGLCYGCCVFYSAFAGDIFAALTLALN-LKNLLPHRWNTLLLISTTVLLPLCLTEDLSGLQV 255 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14681.3580.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 21
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig14681.3580.1 >prot_Ecto-sp13_S_contig14681.3580.1 ID=prot_Ecto-sp13_S_contig14681.3580.1|Name=mRNA_Ecto-sp13_S_contig14681.3580.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=198bp RGGVLGYNTAAGVVSGVFGELSSRVRRNPKGGIVSQHVHEEDPHGDMSVSback to top mRNA from alignment at Ecto-sp13_S_contig14681:771..4119+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig14681.3580.1 ID=mRNA_Ecto-sp13_S_contig14681.3580.1|Name=mRNA_Ecto-sp13_S_contig14681.3580.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3349bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14681:771..4119+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig14681:771..4119+ >mRNA_Ecto-sp13_S_contig14681.3580.1 ID=mRNA_Ecto-sp13_S_contig14681.3580.1|Name=mRNA_Ecto-sp13_S_contig14681.3580.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=594bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14681:771..4119+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |