prot_Ecto-sp13_S_contig146.3529.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp13_S_contig146.3529.1
Unique Name	prot_Ecto-sp13_S_contig146.3529.1
Type	polypeptide
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length	876

Homology

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BLAST of mRNA_Ecto-sp13_S_contig146.3529.1 vs. uniprot
Match: A0A6H5JRN9_9PHAE (PINc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRN9_9PHAE)

HSP 1 Score: 1078 bits (2788), Expect = 0.000e+0
Identity = 706/889 (79.42%), Postives = 716/889 (80.54%), Query Frame = 0

Query:    1 MYSVHTAQESCGYQGHCSSGALADTTNLSSAPLQNANGDSRKQQYYSSGNANSPAPYPPLPPAAPAALDAVCLPLPPQQFAQPCYNYSTPPXXXXXXXXXRAEAIAPTSLNGAYGQAAVDAPLPPPGPPVLPQLVADYPSPEAAMQALQRQSMSPXXXXXXXXXXXXP------FEAPALRQLGMEYHSTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESFSGNSAGSDGRRKKNLPARQQRTAAPSRKEGVEGHYTPAXXXXXXXXXXXXXXXXXXXXXXXXXETRPRDPRKAKSQRXXXXXXXXXXXXXXXX--------KDAYKIPKKSGXXXXXXXXXXXXXXXXXXXXPQPTIVYSKSDLRMYGDTQRSSERTFPRESRSGDANDFRRSDGSGGRVSAGERPSEKDDRRFFSRDNNCSRDGRNERDKDRRYASGGGDHEDGFRRQARDDGAGRRSNDGSGRYGRSREHEENNRRGSGRDRQKQRNGKSCPPPSAEKRRDASAGVRATTVLMSPEQERDDEIAELASQLTALELDAGKGSVADEGKEKAADGGDAGKGKAYLSLKEYKEATASGEIKPYKGTKYQTVDDRYADGWAYNPTTRRWIKVACQEKKDAIEALPALLARLELMESRDKLATQRSQLLETKVEEIKKKKDTVSLAMPTAPVLVAFDTNWLIHRLADTMCRVSDIAGRQKDTSVLIPKAVLTELDRLKTRGRDEATRSSAQKANRYFRGLVEKPLERGREFPVVRVQEDTELFRDNGHHSRPEGLSGDDSILNCCMFFTQGIDTPRKVTLVTGDNNFAIRATAHGLTTTGRPQCDPGHCRMPLCPAPPRPSPFSRGF 875
            MYS H AQESCG+QGHCSSGALADTTNLSSAPLQNANGDSRKQQYYSSGNANSPAPYPPLPPAAPAALDA+CLPLPPQQFAQPCY+YSTPPXXXXXXXXXRAEA APTSLNGAYGQAAVDAPLPPPGPPVLPQLVADYPSPEAAMQALQRQSMSPXXXXXXXXXXXX       FEAPALRQLGMEYH   XXXXXXXXX                                                              ESFSGNSAGSDGRRKK+LPAR                    XXXXXXXXXXXXXXXXXXXXXXXXXETRPRDPRKAKSQR     XXXXXXXXXXX        KDAYKIPKKS XXXXXXXXXXXXXXXXXXX PQP I YSKSDLRMYGDTQRSSERT PRE RSGDAN F RSDGSGGRVSAGERPSEKDDRR  SR +NCSRDGRN+RDK RRYAS  GDH DGF RQ RDDGAGRRSNDGSGRYGRSREHEE                                             ERDDEIAELASQLTALELDAGKGSVAD+GKEK ADG DAGKGKAYLSLKEYKEATASGEIKPYKGTKYQTVDDRYADGWAYNPTTRRWIKVACQEKKDAIEALPALLARLELMESRDKLATQRSQLLETKVEEIKKKKDTVSLA+PTAPVLVAFDTNWLIHRLADTMCRVSDIAGRQKDTSVLIPKAVLTELDRLKTRGRDEATRSSAQKANRYFRGLVEKPLERGREFPVVRVQ+DTELFRDNGHHSRPEGL GDDSILNCCMFFTQGIDTPRKVTLVTGDNNFAIRATAHGLTTTGRPQCDPGHCRMPLCPAPPRPSPFSRG+
Sbjct:    1 MYSAHPAQESCGFQGHCSSGALADTTNLSSAPLQNANGDSRKQQYYSSGNANSPAPYPPLPPAAPAALDAICLPLPPQQFAQPCYDYSTPPXXXXXXXXXRAEAFAPTSLNGAYGQAAVDAPLPPPGPPVLPQLVADYPSPEAAMQALQRQSMSPXXXXXXXXXXXXXXXXQPQFEAPALRQLGMEYHXXXXXXXXXXXXADEHWLPSPPPPQCWQGPPGPPASVMLPIRAGTQEAASPASPQQQHLESGANSSKAAGSSGGESFSGNSAGSDGRRKKSLPARXX-----------------XXXXXXXXXXXXXXXXXXXXXXXXXXETRPRDPRKAKSQRAGAVGXXXXXXXXXXXXXXXXXXXKDAYKIPKKSXXXXXXXXXXXXXXXXXXXX-PQPKIFYSKSDLRMYGDTQRSSERTVPRECRSGDANHFHRSDGSGGRVSAGERPSEKDDRRSPSRGSNCSRDGRNDRDKGRRYASDSGDHTDGFHRQVRDDGAGRRSNDGSGRYGRSREHEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERDDEIAELASQLTALELDAGKGSVADKGKEKVADGDDAGKGKAYLSLKEYKEATASGEIKPYKGTKYQTVDDRYADGWAYNPTTRRWIKVACQEKKDAIEALPALLARLELMESRDKLATQRSQLLETKVEEIKKKKDTVSLAVPTAPVLVAFDTNWLIHRLADTMCRVSDIAGRQKDTSVLIPKAVLTELDRLKTRGRDEATRSSAQKANRYFRGLVEKPLERGREFPVVRVQDDTELFRDNGHHSRPEGLGGDDSILNCCMFFTQGIDTPRKVTLVTGDNNFAIRATAHGLTTTGRPQCDPGHCRMPLCPAPPRPSPFSRGY 871

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BLAST of mRNA_Ecto-sp13_S_contig146.3529.1 vs. uniprot
Match: D8LLH7_ECTSI (PINc domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLH7_ECTSI)

HSP 1 Score: 934 bits (2415), Expect = 0.000e+0
Identity = 553/619 (89.34%), Postives = 561/619 (90.63%), Query Frame = 0

Query:  257 ESFSGNSAGSDGRRKKNLPARQQRTAAPSRKEGVEGHYTPAXXXXXXXXXXXXXXXXXXXXXXXXXETRPRDPRKAKSQRXXXXXXXXXXXXXXXXKDAYKIPKKSGXXXXXXXXXXXXXXXXXXXXPQPTIVYSKSDLRMYGDTQRSSERTFPRESRSGDANDFRRSDGSGGRVSAGERPSEKDDRRFFSRDNNCSRDGRNERDKDRRYASGGGDHEDGFRRQARDDGAGRRSNDGSGRYGRSREHEENNRRGSGRDRQKQRNGKSCPPPSAEKRRDASAGVRATTVLMSPEQERDDEIAELASQLTALELDAGKGSVADEGKEKAADGGDAGKGKAYLSLKEYKEATASGEIKPYKGTKYQTVDDRYADGWAYNPTTRRWIKVACQEKKDAIEALPALLARLELMESRDKLATQRSQLLETKVEEIKKKKDTVSLAMPTAPVLVAFDTNWLIHRLADTMCRVSDIAGRQKDTSVLIPKAVLTELDRLKTRGRDEATRSSAQKANRYFRGLVEKPLERGREFPVVRVQEDTELFRDNGHHSRPEGLSGDDSILNCCMFFTQGIDTPRKVTLVTGDNNFAIRATAHGLTTTGRPQCDPGHCRMPLCPAPPRPSPFSRGF 875
            ESFSGNSA SDG+RKK LPARQQR A                  XXXXXXXXXXXXXXXXXXXXX  TRPRDPRKAKSQR                KDAYKIPK SG XXXXXXXXXXXXXXXXXXX Q  IVYSKS+LRMYGD QRSSERT PRESRSGDANDFRRSDGSGGRV AGERP EKDDRRF SRDNNCSRDGRN+RDKDRRYASGGGDH+DG RRQARDDGAGR SNDGS RYGRSREHEENNRRGSGRDRQKQR GKSCPPPSAEKRRDASAG RATT LMSPEQERDDEIAELASQLTALE+DAGKGSV DEGKEK A+GGDAGKGKAYLSL+EYKEATASGEIKPYKGTKYQTVDDRYADGWAYNPTTRRWIKVACQEKKDAIEALPALLARLELMESRDKLATQRSQLLETKVEEIKKKKDTVSLAMPTAPVLVAFDTNWLIHRLADTMCRVSDIAGRQKDTSVLIPKAVLTELDRLKTRGRDEATRSSAQKANRYFRGLVEKPLERGREFPVVRVQEDTELFRDNGHHSRPEGL GDDSILNCCMFFTQGIDTPRKVTLVTGDNNFAIRATAHGLTTTGRPQCDPGHCRMPLCPAPPRPSPFSRG+
Sbjct:   38 ESFSGNSADSDGQRKKKLPARQQRAAX-----------------XXXXXXXXXXXXXXXXXXXXXVGTRPRDPRKAKSQRAGAVGSSSSSS-----KDAYKIPKNSGSXXXXXXXXXXXXXXXXXXXXQTKIVYSKSELRMYGDAQRSSERTDPRESRSGDANDFRRSDGSGGRVGAGERPPEKDDRRFSSRDNNCSRDGRNDRDKDRRYASGGGDHKDGSRRQARDDGAGRWSNDGSERYGRSREHEENNRRGSGRDRQKQRAGKSCPPPSAEKRRDASAGARATTALMSPEQERDDEIAELASQLTALEIDAGKGSVDDEGKEKVANGGDAGKGKAYLSLEEYKEATASGEIKPYKGTKYQTVDDRYADGWAYNPTTRRWIKVACQEKKDAIEALPALLARLELMESRDKLATQRSQLLETKVEEIKKKKDTVSLAMPTAPVLVAFDTNWLIHRLADTMCRVSDIAGRQKDTSVLIPKAVLTELDRLKTRGRDEATRSSAQKANRYFRGLVEKPLERGREFPVVRVQEDTELFRDNGHHSRPEGLGGDDSILNCCMFFTQGIDTPRKVTLVTGDNNFAIRATAHGLTTTGRPQCDPGHCRMPLCPAPPRPSPFSRGY 634

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BLAST of mRNA_Ecto-sp13_S_contig146.3529.1 vs. uniprot
Match: A0A7S2XI71_9EUKA (Hypothetical protein n=2 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2XI71_9EUKA)

HSP 1 Score: 79.7 bits (195), Expect = 9.870e-13
Identity = 55/149 (36.91%), Postives = 71/149 (47.65%), Query Frame = 0

Query:  700 VLVAFDTNWLIHR--LADTMCRVSDIAGRQKDTSVLIPKAVLTELDRLKTRGRDEATRSSAQKANRYFRGLVEKPLERGREFPVVRVQEDTELFRDNGHHSRPEGLSGDDSILNCCMFFTQGIDTPRKVTLVTGDNNFAIRATAHGLTT 846
            +L   DTNWLI    +A  +       G  K  +VLIP+AV  ELD     G  ++ R     A R  R +  +   R   F  V  Q D E++ D GHH  P  L  DDSILNCC+FF++   +   V L T D N  IRA    + T
Sbjct:   99 MLFVIDTNWLIKEPEVARGLGDKIHALGLIKKVAVLIPRAVWRELD-----GLSKSARECKNNAQRAIRSIYNE-FGRQSSFRTVLGQMDHEIYTDKGHHINPRALKNDDSILNCCLFFSRNQGS--VVHLCTADKNLLIRAKVEQVQT 239

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig146.3529.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig146.3529.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3


Match Name	E-value	Identity	Description
A0A6H5JRN9_9PHAE	0.000e+0	79.42	PINc domain-containing protein n=1 Tax=Ectocarpus ...	[more]
D8LLH7_ECTSI	0.000e+0	89.34	PINc domain-containing protein n=1 Tax=Ectocarpus ...	[more]
A0A7S2XI71_9EUKA	9.870e-13	36.91	Hypothetical protein n=2 Tax=Lotharella oceanica T...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.50.1010		coord: 695..851 e-value: 1.0E-20 score: 76.1
None	No IPR available	PANTHER	PTHR16161	UNCHARACTERIZED	coord: 265..847
IPR002716	PIN domain	PFAM	PF13638	PIN_4	coord: 704..846 e-value: 2.4E-18 score: 66.7
IPR029060	PIN-like domain superfamily	SUPERFAMILY	88723	PIN domain-like	coord: 701..846

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig146	contig	Ecto-sp13_S_contig146:4187..10884 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig146.3529.1	mRNA_Ecto-sp13_S_contig146.3529.1	Ectocarpus species13 EcNAP12_S_4_19m	mRNA	Ecto-sp13_S_contig146 4187..12075 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp13_S_contig146.3529.1 ID=prot_Ecto-sp13_S_contig146.3529.1|Name=mRNA_Ecto-sp13_S_contig146.3529.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=876bp
MYSVHTAQESCGYQGHCSSGALADTTNLSSAPLQNANGDSRKQQYYSSGN
ANSPAPYPPLPPAAPAALDAVCLPLPPQQFAQPCYNYSTPPAPAPYPPLP
RAEAIAPTSLNGAYGQAAVDAPLPPPGPPVLPQLVADYPSPEAAMQALQR
QSMSPPPPPQQQQQQQPPFEAPALRQLGMEYHSTSPPPPPTQPPTNEHWL
PSPPPPQWWQGPPGPPASVMLPFRGGTEEAASPASPQQQHLESGANSSKA
AGSSGGESFSGNSAGSDGRRKKNLPARQQRTAAPSRKEGVEGHYTPAVEG
HYTPAVEGHYPPSVEKHYMPAVETRPRDPRKAKSQRAGAVGSSTSSTSST
SSKDAYKIPKKSGSSSRGRDSYIIPKKTGGTSRPQPTIVYSKSDLRMYGD
TQRSSERTFPRESRSGDANDFRRSDGSGGRVSAGERPSEKDDRRFFSRDN
NCSRDGRNERDKDRRYASGGGDHEDGFRRQARDDGAGRRSNDGSGRYGRS
REHEENNRRGSGRDRQKQRNGKSCPPPSAEKRRDASAGVRATTVLMSPEQ
ERDDEIAELASQLTALELDAGKGSVADEGKEKAADGGDAGKGKAYLSLKE
YKEATASGEIKPYKGTKYQTVDDRYADGWAYNPTTRRWIKVACQEKKDAI
EALPALLARLELMESRDKLATQRSQLLETKVEEIKKKKDTVSLAMPTAPV
LVAFDTNWLIHRLADTMCRVSDIAGRQKDTSVLIPKAVLTELDRLKTRGR
DEATRSSAQKANRYFRGLVEKPLERGREFPVVRVQEDTELFRDNGHHSRP
EGLSGDDSILNCCMFFTQGIDTPRKVTLVTGDNNFAIRATAHGLTTTGRP
QCDPGHCRMPLCPAPPRPSPFSRGF*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR002716	PIN_dom
IPR029060	PIN-like_dom_sf