mRNA_Ecto-sp13_S_contig146.3529.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig146.3529.1
Unique NamemRNA_Ecto-sp13_S_contig146.3529.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig146.3529.1 vs. uniprot
Match: A0A6H5JRN9_9PHAE (PINc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRN9_9PHAE)

HSP 1 Score: 1080 bits (2793), Expect = 0.000e+0
Identity = 706/889 (79.42%), Postives = 716/889 (80.54%), Query Frame = 1 
Query:    1 MYSVHTAQESCGYQGHCSSGALADTTNLSSAPLQNANGDSRKQQYYSSGNANSPAPYPPLPPAAPAALDAVCLPLPPQQFAQPCYNYSTPPXXXXXXXXXRAEAIAPTSLNGAYGQAAVDAPLPPPGPPVLPQLVADYPSPEAAMQALQRQSMSPXXXXXXXXXXXXP------FEAPALRQLGMEYHSTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESFSGNSAGSDGRRKKNLPARQQRTAAPSRKEGVEGHYTPAXXXXXXXXXXXXXXXXXXXXXXXXXETRPRDPRKAKSQRXXXXXXXXXXXXXXXX--------KDAYKIPKKSGXXXXXXXXXXXXXXXXXXXXPQPTIVYSKSDLRMYGDTQRSSERTFPRESRSGDANDFRRSDGSGGRVSAGERPSEKDDRRFFSRDNNCSRDGRNERDKDRRYASGGGDHEDGFRRQARDDGAGRRSNDGSGRYGRSREHEENNRRGSGRDRQKQRNGKSCPPPSAEKRRDASAGVRATTVLMSPEQERDDEIAELASQLTALELDAGKGSVADEGKEKAADGGDAGKGKAYLSLKEYKEATASGEIKPYKGTKYQTVDDRYADGWAYNPTTRRWIKVACQEKKDAIEALPALLARLELMESRDKLATQRSQLLETKVEEIKKKKDTVSLAMPTAPVLVAFDTNWLIHRLADTMCRVSDIAGRQKDTSVLIPKAVLTELDRLKTRGRDEATRSSAQKANRYFRGLVEKPLERGREFPVVRVQEDTELFRDNGHHSRPEGLSGDDSILNCCMFFTQGIDTPRKVTLVTGDNNFAIRATAHGLTTTGRPQCDPGHCRMPLCPAPPRPSPFSRGF 2625
            MYS H AQESCG+QGHCSSGALADTTNLSSAPLQNANGDSRKQQYYSSGNANSPAPYPPLPPAAPAALDA+CLPLPPQQFAQPCY+YSTPPXXXXXXXXXRAEA APTSLNGAYGQAAVDAPLPPPGPPVLPQLVADYPSPEAAMQALQRQSMSPXXXXXXXXXXXX       FEAPALRQLGMEYH   XXXXXXXXX                                                              ESFSGNSAGSDGRRKK+LPAR                    XXXXXXXXXXXXXXXXXXXXXXXXXETRPRDPRKAKSQR     XXXXXXXXXXX        KDAYKIPKKS XXXXXXXXXXXXXXXXXXX PQP I YSKSDLRMYGDTQRSSERT PRE RSGDAN F RSDGSGGRVSAGERPSEKDDRR  SR +NCSRDGRN+RDK RRYAS  GDH DGF RQ RDDGAGRRSNDGSGRYGRSREHEE                                             ERDDEIAELASQLTALELDAGKGSVAD+GKEK ADG DAGKGKAYLSLKEYKEATASGEIKPYKGTKYQTVDDRYADGWAYNPTTRRWIKVACQEKKDAIEALPALLARLELMESRDKLATQRSQLLETKVEEIKKKKDTVSLA+PTAPVLVAFDTNWLIHRLADTMCRVSDIAGRQKDTSVLIPKAVLTELDRLKTRGRDEATRSSAQKANRYFRGLVEKPLERGREFPVVRVQ+DTELFRDNGHHSRPEGL GDDSILNCCMFFTQGIDTPRKVTLVTGDNNFAIRATAHGLTTTGRPQCDPGHCRMPLCPAPPRPSPFSRG+
Sbjct:    1 MYSAHPAQESCGFQGHCSSGALADTTNLSSAPLQNANGDSRKQQYYSSGNANSPAPYPPLPPAAPAALDAICLPLPPQQFAQPCYDYSTPPXXXXXXXXXRAEAFAPTSLNGAYGQAAVDAPLPPPGPPVLPQLVADYPSPEAAMQALQRQSMSPXXXXXXXXXXXXXXXXQPQFEAPALRQLGMEYHXXXXXXXXXXXXADEHWLPSPPPPQCWQGPPGPPASVMLPIRAGTQEAASPASPQQQHLESGANSSKAAGSSGGESFSGNSAGSDGRRKKSLPARXX-----------------XXXXXXXXXXXXXXXXXXXXXXXXXXETRPRDPRKAKSQRAGAVGXXXXXXXXXXXXXXXXXXXKDAYKIPKKSXXXXXXXXXXXXXXXXXXXX-PQPKIFYSKSDLRMYGDTQRSSERTVPRECRSGDANHFHRSDGSGGRVSAGERPSEKDDRRSPSRGSNCSRDGRNDRDKGRRYASDSGDHTDGFHRQVRDDGAGRRSNDGSGRYGRSREHEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERDDEIAELASQLTALELDAGKGSVADKGKEKVADGDDAGKGKAYLSLKEYKEATASGEIKPYKGTKYQTVDDRYADGWAYNPTTRRWIKVACQEKKDAIEALPALLARLELMESRDKLATQRSQLLETKVEEIKKKKDTVSLAVPTAPVLVAFDTNWLIHRLADTMCRVSDIAGRQKDTSVLIPKAVLTELDRLKTRGRDEATRSSAQKANRYFRGLVEKPLERGREFPVVRVQDDTELFRDNGHHSRPEGLGGDDSILNCCMFFTQGIDTPRKVTLVTGDNNFAIRATAHGLTTTGRPQCDPGHCRMPLCPAPPRPSPFSRGY 871
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BLAST of mRNA_Ecto-sp13_S_contig146.3529.1 vs. uniprot
Match: D8LLH7_ECTSI (PINc domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLH7_ECTSI)

HSP 1 Score: 936 bits (2420), Expect = 0.000e+0
Identity = 553/619 (89.34%), Postives = 561/619 (90.63%), Query Frame = 1 
Query:  769 ESFSGNSAGSDGRRKKNLPARQQRTAAPSRKEGVEGHYTPAXXXXXXXXXXXXXXXXXXXXXXXXXETRPRDPRKAKSQRXXXXXXXXXXXXXXXXKDAYKIPKKSGXXXXXXXXXXXXXXXXXXXXPQPTIVYSKSDLRMYGDTQRSSERTFPRESRSGDANDFRRSDGSGGRVSAGERPSEKDDRRFFSRDNNCSRDGRNERDKDRRYASGGGDHEDGFRRQARDDGAGRRSNDGSGRYGRSREHEENNRRGSGRDRQKQRNGKSCPPPSAEKRRDASAGVRATTVLMSPEQERDDEIAELASQLTALELDAGKGSVADEGKEKAADGGDAGKGKAYLSLKEYKEATASGEIKPYKGTKYQTVDDRYADGWAYNPTTRRWIKVACQEKKDAIEALPALLARLELMESRDKLATQRSQLLETKVEEIKKKKDTVSLAMPTAPVLVAFDTNWLIHRLADTMCRVSDIAGRQKDTSVLIPKAVLTELDRLKTRGRDEATRSSAQKANRYFRGLVEKPLERGREFPVVRVQEDTELFRDNGHHSRPEGLSGDDSILNCCMFFTQGIDTPRKVTLVTGDNNFAIRATAHGLTTTGRPQCDPGHCRMPLCPAPPRPSPFSRGF 2625
            ESFSGNSA SDG+RKK LPARQQR A                  XXXXXXXXXXXXXXXXXXXXX  TRPRDPRKAKSQR                KDAYKIPK SG XXXXXXXXXXXXXXXXXXX Q  IVYSKS+LRMYGD QRSSERT PRESRSGDANDFRRSDGSGGRV AGERP EKDDRRF SRDNNCSRDGRN+RDKDRRYASGGGDH+DG RRQARDDGAGR SNDGS RYGRSREHEENNRRGSGRDRQKQR GKSCPPPSAEKRRDASAG RATT LMSPEQERDDEIAELASQLTALE+DAGKGSV DEGKEK A+GGDAGKGKAYLSL+EYKEATASGEIKPYKGTKYQTVDDRYADGWAYNPTTRRWIKVACQEKKDAIEALPALLARLELMESRDKLATQRSQLLETKVEEIKKKKDTVSLAMPTAPVLVAFDTNWLIHRLADTMCRVSDIAGRQKDTSVLIPKAVLTELDRLKTRGRDEATRSSAQKANRYFRGLVEKPLERGREFPVVRVQEDTELFRDNGHHSRPEGL GDDSILNCCMFFTQGIDTPRKVTLVTGDNNFAIRATAHGLTTTGRPQCDPGHCRMPLCPAPPRPSPFSRG+
Sbjct:   38 ESFSGNSADSDGQRKKKLPARQQRAAX-----------------XXXXXXXXXXXXXXXXXXXXXVGTRPRDPRKAKSQRAGAVGSSSSSS-----KDAYKIPKNSGSXXXXXXXXXXXXXXXXXXXXQTKIVYSKSELRMYGDAQRSSERTDPRESRSGDANDFRRSDGSGGRVGAGERPPEKDDRRFSSRDNNCSRDGRNDRDKDRRYASGGGDHKDGSRRQARDDGAGRWSNDGSERYGRSREHEENNRRGSGRDRQKQRAGKSCPPPSAEKRRDASAGARATTALMSPEQERDDEIAELASQLTALEIDAGKGSVDDEGKEKVANGGDAGKGKAYLSLEEYKEATASGEIKPYKGTKYQTVDDRYADGWAYNPTTRRWIKVACQEKKDAIEALPALLARLELMESRDKLATQRSQLLETKVEEIKKKKDTVSLAMPTAPVLVAFDTNWLIHRLADTMCRVSDIAGRQKDTSVLIPKAVLTELDRLKTRGRDEATRSSAQKANRYFRGLVEKPLERGREFPVVRVQEDTELFRDNGHHSRPEGLGGDDSILNCCMFFTQGIDTPRKVTLVTGDNNFAIRATAHGLTTTGRPQCDPGHCRMPLCPAPPRPSPFSRGY 634
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BLAST of mRNA_Ecto-sp13_S_contig146.3529.1 vs. uniprot
Match: A0A7S2XI71_9EUKA (Hypothetical protein n=2 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2XI71_9EUKA)

HSP 1 Score: 79.7 bits (195), Expect = 1.460e-12
Identity = 55/149 (36.91%), Postives = 71/149 (47.65%), Query Frame = 1 
Query: 2098 VLVAFDTNWLIHR--LADTMCRVSDIAGRQKDTSVLIPKAVLTELDRLKTRGRDEATRSSAQKANRYFRGLVEKPLERGREFPVVRVQEDTELFRDNGHHSRPEGLSGDDSILNCCMFFTQGIDTPRKVTLVTGDNNFAIRATAHGLTT 2538
            +L   DTNWLI    +A  +       G  K  +VLIP+AV  ELD     G  ++ R     A R  R +  +   R   F  V  Q D E++ D GHH  P  L  DDSILNCC+FF++   +   V L T D N  IRA    + T
Sbjct:   99 MLFVIDTNWLIKEPEVARGLGDKIHALGLIKKVAVLIPRAVWRELD-----GLSKSARECKNNAQRAIRSIYNE-FGRQSSFRTVLGQMDHEIYTDKGHHINPRALKNDDSILNCCLFFSRNQGS--VVHLCTADKNLLIRAKVEQVQT 239
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig146.3529.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JRN9_9PHAE0.000e+079.42PINc domain-containing protein n=1 Tax=Ectocarpus ... [more]
D8LLH7_ECTSI0.000e+089.34PINc domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A7S2XI71_9EUKA1.460e-1236.91Hypothetical protein n=2 Tax=Lotharella oceanica T... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig146contigEcto-sp13_S_contig146:4187..12075 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score97.1
Seed ortholog evalue4.5e-17
Seed eggNOG ortholog227086.JGI_V11_73744
Preferred nameSWT1
Model size3629
KEGG koko:K01669
Hectar predicted targeting categoryother localisation
GOsGO:0000956,GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004540,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0006139,GO:0006351,GO:0006401,GO:0006402,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010605,GO:0010629,GO:0016070,GO:0016071,GO:0016787,GO:0016788,GO:0018130,GO:0019222,GO:0019438,GO:0019439,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0034655,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044271,GO:0044424,GO:0044464,GO:0046483,GO:0046700,GO:0048519,GO:0050789,GO:0060255,GO:0065007,GO:0071025,GO:0071027,GO:0071028,GO:0071032,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097659,GO:0140098,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576
Exons10
EggNOG free text desc.nuclear mRNA surveillance of mRNP export
EggNOG OGsKOG4689@1,KOG4689@2759
EC4.1.99.3
Cds size2628
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03400
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig146.3529.1prot_Ecto-sp13_S_contig146.3529.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig146 4187..10884 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462779.4950452-CDS-Ecto-sp13_S_contig146:4186..43121681462779.4950452-CDS-Ecto-sp13_S_contig146:4186..4312Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig146 4187..4312 +
1681462779.509026-CDS-Ecto-sp13_S_contig146:4828..63761681462779.509026-CDS-Ecto-sp13_S_contig146:4828..6376Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig146 4829..6376 +
1681462779.5175173-CDS-Ecto-sp13_S_contig146:6822..69701681462779.5175173-CDS-Ecto-sp13_S_contig146:6822..6970Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig146 6823..6970 +
1681462779.5259817-CDS-Ecto-sp13_S_contig146:7648..77971681462779.5259817-CDS-Ecto-sp13_S_contig146:7648..7797Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig146 7649..7797 +
1681462779.534257-CDS-Ecto-sp13_S_contig146:8181..82811681462779.534257-CDS-Ecto-sp13_S_contig146:8181..8281Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig146 8182..8281 +
1681462779.5425646-CDS-Ecto-sp13_S_contig146:8459..86591681462779.5425646-CDS-Ecto-sp13_S_contig146:8459..8659Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig146 8460..8659 +
1681462779.5509212-CDS-Ecto-sp13_S_contig146:9070..91741681462779.5509212-CDS-Ecto-sp13_S_contig146:9070..9174Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig146 9071..9174 +
1681462779.55911-CDS-Ecto-sp13_S_contig146:9602..97021681462779.55911-CDS-Ecto-sp13_S_contig146:9602..9702Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig146 9603..9702 +
1681462779.5672352-CDS-Ecto-sp13_S_contig146:10731..108841681462779.5672352-CDS-Ecto-sp13_S_contig146:10731..10884Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig146 10732..10884 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462779.5754752-UTR-Ecto-sp13_S_contig146:10884..113731681462779.5754752-UTR-Ecto-sp13_S_contig146:10884..11373Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig146 10885..11373 +
1681462779.5835674-UTR-Ecto-sp13_S_contig146:11563..120751681462779.5835674-UTR-Ecto-sp13_S_contig146:11563..12075Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig146 11564..12075 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig146.3529.1

>prot_Ecto-sp13_S_contig146.3529.1 ID=prot_Ecto-sp13_S_contig146.3529.1|Name=mRNA_Ecto-sp13_S_contig146.3529.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=876bp
MYSVHTAQESCGYQGHCSSGALADTTNLSSAPLQNANGDSRKQQYYSSGN
ANSPAPYPPLPPAAPAALDAVCLPLPPQQFAQPCYNYSTPPAPAPYPPLP
RAEAIAPTSLNGAYGQAAVDAPLPPPGPPVLPQLVADYPSPEAAMQALQR
QSMSPPPPPQQQQQQQPPFEAPALRQLGMEYHSTSPPPPPTQPPTNEHWL
PSPPPPQWWQGPPGPPASVMLPFRGGTEEAASPASPQQQHLESGANSSKA
AGSSGGESFSGNSAGSDGRRKKNLPARQQRTAAPSRKEGVEGHYTPAVEG
HYTPAVEGHYPPSVEKHYMPAVETRPRDPRKAKSQRAGAVGSSTSSTSST
SSKDAYKIPKKSGSSSRGRDSYIIPKKTGGTSRPQPTIVYSKSDLRMYGD
TQRSSERTFPRESRSGDANDFRRSDGSGGRVSAGERPSEKDDRRFFSRDN
NCSRDGRNERDKDRRYASGGGDHEDGFRRQARDDGAGRRSNDGSGRYGRS
REHEENNRRGSGRDRQKQRNGKSCPPPSAEKRRDASAGVRATTVLMSPEQ
ERDDEIAELASQLTALELDAGKGSVADEGKEKAADGGDAGKGKAYLSLKE
YKEATASGEIKPYKGTKYQTVDDRYADGWAYNPTTRRWIKVACQEKKDAI
EALPALLARLELMESRDKLATQRSQLLETKVEEIKKKKDTVSLAMPTAPV
LVAFDTNWLIHRLADTMCRVSDIAGRQKDTSVLIPKAVLTELDRLKTRGR
DEATRSSAQKANRYFRGLVEKPLERGREFPVVRVQEDTELFRDNGHHSRP
EGLSGDDSILNCCMFFTQGIDTPRKVTLVTGDNNFAIRATAHGLTTTGRP
QCDPGHCRMPLCPAPPRPSPFSRGF*
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mRNA from alignment at Ecto-sp13_S_contig146:4187..12075+

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig146.3529.1 ID=mRNA_Ecto-sp13_S_contig146.3529.1|Name=mRNA_Ecto-sp13_S_contig146.3529.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=7889bp|location=Sequence derived from alignment at Ecto-sp13_S_contig146:4187..12075+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGTATTCCGTGCATACCGCTCAGGAATCATGTGGTTACCAAGGTCATTG
TAGCAGTGGCGCTCTCGCTGATACAACAAATCTGAGTTCGGCTCCTCTCC
AAAACGCCAACGGCGACTCCAGGAAGGTGCGGTCGGTCTGCCTATGTTTG
CCTGTTTAGTCGTTGGGTCCTGTTTCAGGTGGGCGGATTCAGGAAACTCG
TATCACGGGGTGACGTGGTGGGTGTGTAGATACGGACGCTGCACGATGCC
CGCACAGCAGTAGGGAGAAAAAGCACAGCTGATACATATATACGCATGTT
GTACATGTGAGCACAGCAACGCGTGCTCTTCCTACTTATTTGTTGAGGCA
CCAATGTGAGATTAGTATCTGATGTTGTGCAGCACGCTACCAGAGCAGTA
GGAGCAGATGCCGCCTCGACATGTGTATACACTGAAGTGGCCGTGGGTTT
CTGTTTGCAGGGTTTCGCTCGCTCGCATTAATGCTGCCGTTTTGCCATAG
GCTTGTCCATCCAATCAATATAAAAATAAATTCACACAAAGAAAATATCC
TAGCTATTTGTACAGCGCTTTTCTCGATCCCGAAATGCCTGTCCTTGTTT
CATTTGCCGGTCCGCTCCTCCGTCGTGTTGTGTCCTCCTCAGCAGCAATA
TTACAGCAGTGGTAACGCCAACAGCCCCGCGCCCTACCCACCTCTCCCCC
CAGCGGCCCCGGCAGCGTTGGATGCTGTCTGTCTACCGCTGCCCCCACAG
CAATTCGCACAGCCTTGCTACAACTACTCCACCCCGCCGGCACCGGCGCC
GTACCCTCCACTGCCCCGAGCGGAGGCGATTGCCCCAACATCGCTCAACG
GTGCTTACGGCCAAGCCGCCGTGGATGCTCCCTTGCCCCCACCCGGCCCG
CCCGTACTGCCTCAGCTCGTTGCCGATTACCCATCCCCTGAGGCTGCCAT
GCAGGCTTTGCAGCGTCAATCGATGTCGCCACCGCCGCCGCCGCAGCAGC
AGCAGCAGCAGCAGCCACCATTTGAAGCGCCAGCGCTGCGTCAGCTGGGT
ATGGAATATCACTCTACATCACCGCCTCCCCCACCAACACAGCCACCTAC
CAATGAGCATTGGCTACCGTCACCGCCACCTCCCCAGTGGTGGCAGGGTC
CTCCAGGCCCCCCTGCATCAGTCATGTTGCCATTTCGAGGAGGCACGGAG
GAAGCAGCATCGCCGGCGTCACCGCAGCAACAGCACTTGGAGAGCGGCGC
CAACAGCAGCAAAGCGGCGGGATCCTCGGGAGGAGAGAGCTTCAGCGGCA
ACTCTGCCGGTTCCGACGGTCGGAGGAAGAAAAACCTGCCGGCGCGACAA
CAACGCACAGCAGCACCTTCTCGGAAGGAAGGCGTCGAGGGACACTACAC
GCCCGCGGTCGAGGGACACTACACGCCCGCGGTCGAGGGGCATTACCCGC
CCTCGGTCGAGAAGCATTACATGCCCGCGGTGGAAACGAGACCCCGCGAT
CCGCGAAAAGCAAAGTCACAACGCGCCGGCGCCGTCGGCAGCAGCACCAG
CAGCACCAGCAGCACCAGCAGCAAGGATGCCTACAAGATCCCCAAAAAGA
GCGGGAGCAGCTCTCGAGGACGAGACTCCTACATCATACCCAAGAAAACC
GGCGGTACTTCCAGACCCCAACCCACAATCGTTTACAGCAAGAGCGATTT
GAGGATGTACGGGGACACTCAGCGTAGCTCCGAGAGAACGTTCCCACGCG
AGAGCCGGTCGGGAGATGCAAACGATTTCCGTCGCTCCGACGGCTCGGGC
GGGCGCGTTAGTGCGGGCGAACGGCCGTCAGAGAAAGATGATCGACGCTT
CTTTTCCCGCGATAACAACTGCAGTCGCGACGGCCGCAACGAGAGGGACA
AAGACCGGCGTTACGCGAGCGGCGGTGGCGACCACGAGGATGGTTTCCGC
CGTCAGGCGAGGGATGACGGCGCCGGCCGTCGGTCGAACGACGGAAGCGG
GAGGTACGGAAGAAGCCGGGAACACGAAGAGAACAACCGACGCGGGAGTG
GTCGTGATAGGCAGAAGCAGAGGAACGGGAAGTCCTGCCCTCCCCCTAGC
GCGGAGAAACGGCGTGATGCGAGCGCAGGTGTTCGCGCTACCACGGTGTT
GATGTCACCGGAACAGGAACGAGACGACGAGATTGCCGAGGTAGCCATCC
CCCGTTTGATGTGCGAGGAATTGTGTACGCTGCTGGTGCAAGTGCAGCTT
CTGCCGGGCAGCGGTCGTTATTAACTTTTGGTATTCGATTTCATAGGCTG
CATCGATGATCAGCCGAAGGTCGCGTGAGCTGGCATCGATTTTTCTATTA
TCCGCGTTCTTTTGCAGCCATTGGTGTACTGTGCTACCTCGTGGATAGGA
GTCGCGTTGTAGAAGCGTAACGTCAATAACATGAGAAAATAAGGTGAAAA
CTACTGCCACACCTTCAGGCTCGGAAAACATGCAGGACTACCCACGAAAA
CCGTGATTTGTAGACGGATCACGTCAAGCACCTCGACTGTTGAGCCTTTA
TTTTCCTCCCCGCCAGCTACCCTGTTCTCGTGTGTGACTGCCATGCTGCC
TGCATCTGTGTTCGTCTTTTCCGTGTCTTTGAGCAGCTCGCTAGCCAGCT
CACGGCTCTCGAGCTAGACGCTGGCAAGGGAAGCGTCGCCGACGAGGGCA
AGGAGAAGGCCGCCGACGGCGGCGATGCGGGGAAGGGTAAGGCATACCTA
TCGCTGAAGGAGTACAAAGAGGCCACCGCGTCAGGTATGCCTGGCTGGTG
CTAACATGGTGTATTTGCTTTACCAACTGCTGCGGTTGACGCTTGAAATT
TTGATCATCTTCGTGTGGGTTCTACTGTAGCGTTCATGTCTGTGCTACTG
CACCTGCTGTCGTTGGTGGGAAGAGCCGTGAGGCCGGTCTGGGTGCTGTT
GTTGTTCGTTGGCTGCGGTGGCAGGGGTGGACGTGGTGGTCAATTCGTCG
TCGCTGGTAATGATATTCTTGTTGCGCGGGACAACTGGGCGTTCTTCTTG
TGGCGTGGTGAGATCAGAAGTCCCTGTTTCCTTGACGTTTGACGTTTGCG
ATTATGGCTATTTGGTCATAAGGCGTCTCGTCTGTGGCTTTAACAGAGAA
AGATAACAGTTCACTTGTCAGCTATCACCACCTCTTTAATGCGAAACAAT
GGGGTAGTATCAAAATAATAAGCATACCGGAAGAACTGAGCCTCTCACAC
AAGGGCACCAAACAAAGCTACGTGAACAGATCCGTATTTGGTTTGGTTTG
TGCGTTGCTGTCCGACTTTTTCATGCAGAAACGCCCCCCACTACTGCTGT
GCCAGTTACCATAGAATTTTCCGCCTTTCTTCTAGATCAGATGAGACATT
TTTTTCGCATTTCCGTTTCTCTTCGGCTAACCTCGGTGCTATCGCACATT
TGACGTCCACAGGAGAGATCAAGCCGTACAAGGGCACCAAGTACCAGACG
GTGGACGACCGCTACGCCGACGGCTGGGCCTACAACCCCACAACCCGCCG
CTGGATCAAGGTCGCCTGCCAGGAAAAGAAGGACGCCATAGAGGCCCTCC
CAGCACTCCTCGTGAGGAGGCGTTTGTAGTTTCGCTTTGCTGTTTGGAGT
GCTTGAGGTCACGTTTGGCGCTTACCACGTCCATTGCGTTGTCTCTAGAA
TTTGACAGTACAGCGCTTCAGTCTGATGAGGAAATGTGTGAGGTGTTGGA
ACGGGAGATAAAAGAGAACCCTCGAACTGAGCTCAACAACAACGAACCGG
GAGGGGTAAACATGAGCGTTCCTTACTGGTTAGGGGATCCGGCGCAGTTC
TGTCAACGAAGGCAGGCCAGAGAATATTGGCACAACGCACGTTGCGCGAC
CGCGTGTAAAAGACTGAAGCTGAGCTGCTACCTACGTCGTTCAGTGGTTA
TTCTGTGAAATTTCTCGCGGCATACACTGTCGTTTTTGTCCGCAGGCGAG
ATTGGAGCTAATGGAGAGCAGAGACAAGCTAGCGACCCAGCGATCTCAGC
TACTAGAGACGAAGGTCGAAGAGATCAAGAAGAAGAAGGACACAGGTGGG
TTGGCGTTGCCATGGTTTCAAAGCGACGGTTGCGTAATCGCCCGAAGAGC
ACAGCAGTTGTAACGACAACGACGACGGACACGACTACAAACAAAAATAT
ACAGCATCGAGAACACGTCAGATGAGCAACTCTCCCCCGCCTATCTCAAC
TACTCTTGTCATGTGTGTTGCAGTTTCTCTGGCGATGCCGACGGCTCCTG
TGCTGGTAGCGTTCGACACGAACTGGCTCATCCACCGGCTCGCCGATACC
ATGTGCCGCGTGAGCGACATCGCGGGTAGGCAGAAGGACACCTCCGTTCT
CATACCCAAGGCGGTGTTGACCGAGCTGGACAGGCTCAAGACTCGCGGGA
GAGACGAGGCTACTCGCTCCAGCGTGAGTGGGTGTTGCTGTTGCTGTTGT
CATCGGCCTGTAGTCGGTAGTTGTTGTGGTGTTGGCTGAGGCTCGTTCTC
TCTCTCTCGTGGTTTCTGACGAAGGGGAGGTTGGTGTTGTTGCGAAGGTT
TTTGTCTTTTTATGGAGACTTTCTGAGCGACCGTGCTCGCTCCCAGCCCG
TCGCGGGCAAGCCTTCACGGTGACGTCTGCTGCCCTCGGATTGTTTTTGT
TGCTGATACATGCTTTGGCAAGATCTCCGTCTACGACTATCAGGGTCAAC
TGACAAACTTCCCGTTGGACCCAAATCAAACGGTTATACAAAGCATACTG
TTGAATACATGTAAAGGGTTAGCTTTTTTTACCTCAACACGGAAAACCTT
TTCGTGTGCTCTTGTATCATTTTGTCACATTCAGGCTCAGAAGGCCAACC
GATACTTCCGAGGTCTCGTCGAAAAACCTCTCGAGCGCGGAAGGGAGTTC
CCCGTCGTTCGCGTCCAGGAAGACACCGAGCTTTTCCGGTAAGCCACCAG
TATATTGTTTCTCTCGTTTGACAGCCGTGCGTTTCAGCGGCTGCATAAGA
GTGCCACCAATCAACGACTTGGCGGTCATTACACTGCGGCCTAATTTCTG
AACAAACTGGAGAGAAGCCGGCAATCGCCTCCACGAAATACACCCCGAAT
AAATCGAGCCTGAACAAGGCGCAACCGGAACCCGAGCCTCGGGCACACGT
AGTTCTCATATGGAACGAAGATCTATAGACGGTTCGACGCAAAAGGTCCT
GTAGATCCAATGTTTTGTCTATGCTCAGGATGATGTCGTTGTCCAAGATT
ATATGATGCGCTGTGCGCCGCTCTCCATCAACCATGCTGGTGTGATCATT
TGCCGTGATGATGAGAGAAGTTTTATGTGGTTGACGAACACCCTTGTGGA
ATTTCCTCCTTTGCAGGGACAACGGACATCACAGTAGGCCCGAGGGCCTC
AGCGGCGACGACTCGATCCTCAACTGCTGCATGTTCTTCACGCAAGGAAT
CGACACGCCGCGCAAGGTGTGTACCGTCCTATTTCAAGATCGTGCAGCAA
CGCTGTAGTTACGATATTTGATTGGGGGGGGGGGGAGTTGTTTGCAGCCG
GCAACGAGAAATGCTCTTTAGAAGGACACCTCTTGCATGGTGTGTGCGTG
CGAGCCGCGACAGGGTGCAGAGTATCTGTCGGCGGGGGAATGGGAAAGCA
GGGGGCTGTGTCCAATGTTGATAAGGCGTTGATACGCCAGAGCTTGCGAT
ATTCTTGCACGCTCCAGTAGCTTGGGGTGTGCGTGTGGGTTAAGGTAGGA
TTTAGGAGTGGGTTAGGCCTAGTGAGGCCTAGCGTCGTGGAGTAGCTGGA
GGGCTGGAAACCCGCTTTGGCTTTGGTTTCGTGTCTAACTCCAACGACAA
CCCAAAAATTGTTGACCTGGCCAGTTCAAAAATCTCGCCAGCTTTGGCGT
ACGTACGCCTGTCGGCCCAATGTTGGGGCACGAGTGATGGCGATCTTGCG
AGACGGGGAGGAGCTGCCGAGATCCAAGTATGAACATACCGCCCACAAAC
GAGCACTACATGGCGACAAAAACTCCAACATTGGACACAGTACCCTGCCT
TCCGATCCCGCCGCCGACAGATACTCTGCAACAAACCTGACGCGGCTCCC
ACGCACACACCAAACACATTTATCGTTGCCTGCTGCAAACAACCCCTCCC
CCCAAACAGATATCGAAACAACTGCTGTGCAAGAATATCTCCCGTGCTTA
TGGGTGTCCTTGGTGTTGCAAGAGGCACCTGCAGGGCACTAATCGATTAC
GCGTGACCTTCTATTTTGACGTCAGTCTATGTGCAACAAGCTCCTCCACC
AAAACCATGGTTGTCGAAACACCGCCAAACAGAGTTGAACGCGCATTCGA
CCAAAAAGCGGAATACCTTAATTTCCGCGTGGCGCGACACAGCTTGGGAC
GTGAATGCGTGACCCGCGCATCCATCCGTCTTTCATTCTTCTCATGGACG
CATACTGAAACCGCGTTCTCCCTTCGTTTTTTTGTATTGCCGCAGGTGAC
CCTCGTCACGGGCGACAATAACTTCGCCATTCGCGCCACCGCGCACGGGT
TGACGACCACTGGCCGTCCGCAATGCGATCCTGGGCATTGCCGCATGCCC
CTCTGCCCTGCCCCTCCCCGCCCTTCCCCGTTCTCGCGCGGCTTTTGATG
AGAGGAGGCACCATAGATGAAGTAATGTATCATGTCTCTCTCCCATTGGA
CCGTTGCCGCCTGACGTTTCCACAACCGTACTAGGTAGGGATCAGCACCG
AGAGGTAGGGTTCGTCGTAATCAATTTGCGGCATTCGAAAAATCGATCGC
AGTCATTGATTTCCCCTCCCTGCTCATGTGAGGGCTAGTCCAAAAGCGGG
GGTGCCACTTGCGGATGGGCCATGACTTGAGACGATCACGGCCGTTGTAC
CGTGGTACGAAACCCCCTACGTGCAATGAAATGGAAGAGTTGTTGTGGGG
GCGGGACTTGGTGTGTTCTGCGTCGTTTTGTTAATACGTGAGAGTAATTT
GGGGCAAGCAATGACGAACAAACGAACGAGTTGGCGTCTGTTTGCCTGCT
TCAGTACGCATTGTTTTCAGGCTCAGTGGCATTCACCATGTCTCTCTGGC
CCTTGTGCCGTTGCCCTGTTTTTTTTTTCGTTTTGAGGATGAACGTATCG
GAGTGGTGTTGTGATGCAATGTACCTTTTTTTTGTAGACGATACTTGGCG
AGGGCCGTCTTGGAGACGGGCCCTCTTCAACGCATCAATAGTGATCATAT
TTGATAGCCTAGCCAGATCATCATGACTTGAGATGATCAGTGCTGTTGTT
TAACGGCAGACGGGGAGAGAGGGCGGTGATTGGTACGTGTTTGTACCTGG
GCTCGAACCTGGGCAATTGCATGATGGAAACCTTTGATTGCAAACGATTT
GCATGGATGATCGCAAAAGGTGTGGACTCTCTGAGAGACTGGTTAGATTT
CTCGCTAGAGAGCGCGTCTTACCTTTCGAGTTTTTCGCGTTCACCTATGT
TTCCTTGTATCACGTGAATTCTGAGTATTTGTTCATGCGTATCCGATGTC
GAACTAAAGCAGTCACAGAATAAAAAAATCTGGGCCTCGCGACTGGTACA
ATCGCCCTTCCACTTCACAAGTGTTGGCAACACCTGTCCATTGTACATAA
TTCGCGACTACACCTCTGGTACAGCCAAGCCTGAGGGATTTGGTGTGATA
ATTTTCTAGGGGTTTATGCTGGTACTAGTTACCAGGGATGGATATGCGTT
TCTAATGCATACAACCATAGCGAGCGGTGGTCCATCGTGGCTATACTGCT
GTGGTAGATAATGCGGTAAACTATATTTCTGTGAGGTGC
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig146:4187..12075+

>mRNA_Ecto-sp13_S_contig146.3529.1 ID=mRNA_Ecto-sp13_S_contig146.3529.1|Name=mRNA_Ecto-sp13_S_contig146.3529.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=2628bp|location=Sequence derived from alignment at Ecto-sp13_S_contig146:4187..12075+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGTATTCCGTGCATACCGCTCAGGAATCATGTGGTTACCAAGGTCATTG
TAGCAGTGGCGCTCTCGCTGATACAACAAATCTGAGTTCGGCTCCTCTCC
AAAACGCCAACGGCGACTCCAGGAAGCAGCAATATTACAGCAGTGGTAAC
GCCAACAGCCCCGCGCCCTACCCACCTCTCCCCCCAGCGGCCCCGGCAGC
GTTGGATGCTGTCTGTCTACCGCTGCCCCCACAGCAATTCGCACAGCCTT
GCTACAACTACTCCACCCCGCCGGCACCGGCGCCGTACCCTCCACTGCCC
CGAGCGGAGGCGATTGCCCCAACATCGCTCAACGGTGCTTACGGCCAAGC
CGCCGTGGATGCTCCCTTGCCCCCACCCGGCCCGCCCGTACTGCCTCAGC
TCGTTGCCGATTACCCATCCCCTGAGGCTGCCATGCAGGCTTTGCAGCGT
CAATCGATGTCGCCACCGCCGCCGCCGCAGCAGCAGCAGCAGCAGCAGCC
ACCATTTGAAGCGCCAGCGCTGCGTCAGCTGGGTATGGAATATCACTCTA
CATCACCGCCTCCCCCACCAACACAGCCACCTACCAATGAGCATTGGCTA
CCGTCACCGCCACCTCCCCAGTGGTGGCAGGGTCCTCCAGGCCCCCCTGC
ATCAGTCATGTTGCCATTTCGAGGAGGCACGGAGGAAGCAGCATCGCCGG
CGTCACCGCAGCAACAGCACTTGGAGAGCGGCGCCAACAGCAGCAAAGCG
GCGGGATCCTCGGGAGGAGAGAGCTTCAGCGGCAACTCTGCCGGTTCCGA
CGGTCGGAGGAAGAAAAACCTGCCGGCGCGACAACAACGCACAGCAGCAC
CTTCTCGGAAGGAAGGCGTCGAGGGACACTACACGCCCGCGGTCGAGGGA
CACTACACGCCCGCGGTCGAGGGGCATTACCCGCCCTCGGTCGAGAAGCA
TTACATGCCCGCGGTGGAAACGAGACCCCGCGATCCGCGAAAAGCAAAGT
CACAACGCGCCGGCGCCGTCGGCAGCAGCACCAGCAGCACCAGCAGCACC
AGCAGCAAGGATGCCTACAAGATCCCCAAAAAGAGCGGGAGCAGCTCTCG
AGGACGAGACTCCTACATCATACCCAAGAAAACCGGCGGTACTTCCAGAC
CCCAACCCACAATCGTTTACAGCAAGAGCGATTTGAGGATGTACGGGGAC
ACTCAGCGTAGCTCCGAGAGAACGTTCCCACGCGAGAGCCGGTCGGGAGA
TGCAAACGATTTCCGTCGCTCCGACGGCTCGGGCGGGCGCGTTAGTGCGG
GCGAACGGCCGTCAGAGAAAGATGATCGACGCTTCTTTTCCCGCGATAAC
AACTGCAGTCGCGACGGCCGCAACGAGAGGGACAAAGACCGGCGTTACGC
GAGCGGCGGTGGCGACCACGAGGATGGTTTCCGCCGTCAGGCGAGGGATG
ACGGCGCCGGCCGTCGGTCGAACGACGGAAGCGGGAGGTACGGAAGAAGC
CGGGAACACGAAGAGAACAACCGACGCGGGAGTGGTCGTGATAGGCAGAA
GCAGAGGAACGGGAAGTCCTGCCCTCCCCCTAGCGCGGAGAAACGGCGTG
ATGCGAGCGCAGGTGTTCGCGCTACCACGGTGTTGATGTCACCGGAACAG
GAACGAGACGACGAGATTGCCGAGCTCGCTAGCCAGCTCACGGCTCTCGA
GCTAGACGCTGGCAAGGGAAGCGTCGCCGACGAGGGCAAGGAGAAGGCCG
CCGACGGCGGCGATGCGGGGAAGGGTAAGGCATACCTATCGCTGAAGGAG
TACAAAGAGGCCACCGCGTCAGGAGAGATCAAGCCGTACAAGGGCACCAA
GTACCAGACGGTGGACGACCGCTACGCCGACGGCTGGGCCTACAACCCCA
CAACCCGCCGCTGGATCAAGGTCGCCTGCCAGGAAAAGAAGGACGCCATA
GAGGCCCTCCCAGCACTCCTCGCGAGATTGGAGCTAATGGAGAGCAGAGA
CAAGCTAGCGACCCAGCGATCTCAGCTACTAGAGACGAAGGTCGAAGAGA
TCAAGAAGAAGAAGGACACAGTTTCTCTGGCGATGCCGACGGCTCCTGTG
CTGGTAGCGTTCGACACGAACTGGCTCATCCACCGGCTCGCCGATACCAT
GTGCCGCGTGAGCGACATCGCGGGTAGGCAGAAGGACACCTCCGTTCTCA
TACCCAAGGCGGTGTTGACCGAGCTGGACAGGCTCAAGACTCGCGGGAGA
GACGAGGCTACTCGCTCCAGCGCTCAGAAGGCCAACCGATACTTCCGAGG
TCTCGTCGAAAAACCTCTCGAGCGCGGAAGGGAGTTCCCCGTCGTTCGCG
TCCAGGAAGACACCGAGCTTTTCCGGGACAACGGACATCACAGTAGGCCC
GAGGGCCTCAGCGGCGACGACTCGATCCTCAACTGCTGCATGTTCTTCAC
GCAAGGAATCGACACGCCGCGCAAGGTGACCCTCGTCACGGGCGACAATA
ACTTCGCCATTCGCGCCACCGCGCACGGGTTGACGACCACTGGCCGTCCG
CAATGCGATCCTGGGCATTGCCGCATGCCCCTCTGCCCTGCCCCTCCCCG
CCCTTCCCCGTTCTCGCGCGGCTTTTGA
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