mRNA_Ecto-sp13_S_contig14597.3525.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig14597.3525.1
Unique NamemRNA_Ecto-sp13_S_contig14597.3525.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig14597.3525.1 vs. uniprot
Match: A0A6H5JP92_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP92_9PHAE)

HSP 1 Score: 515 bits (1326), Expect = 3.340e-183
Identity = 247/263 (93.92%), Postives = 252/263 (95.82%), Query Frame = 1
Query:    1 QGVDLLDGLTDVDVRLEVLDLGSLHSVIAFAQRFKASGTKVDVLVNNAGVFGVPNRRETADGLEMHIGVNHFGGHLLTRLMEPLIKDGGRVLFLSSLAHSRPPGMPKTTWDWDNVNFDKPKTYDRLSAYCRSKLANIWDAKEFAKHLAARSINTYAVQPGLVKTEIHRGIGGGKLIMPIVNAGYVALGWVWLKGPLDGALTTIRCAVDPSLAGPELSGKYWGNMKEETPSELALDPANPPRLWEITESVLEEKLGMRVDGVLP 789
            +GVDLLDGLT+VDVRLEVLDLGSL SVIAFAQ FKASGTKVDVLVNNAG+FGVPNRRETADGLEMHIGVNHFGGHLLTRLMEP I DGGRVLFLSSL HSRPPGMPKTTWDWDN+NFDKPKTYDRLSAYCRSKLANIWDAKEFAK LAARSINTYAVQPGLVKTEIHRGIGGGKLIMPIVNAGY ALGWVWLKGPLDGALTTIRCAVDP LAGPELSGKYWGNMKEETPSELALDPANPPRLWEITESVLE+KLG RVD V P
Sbjct:   77 EGVDLLDGLTEVDVRLEVLDLGSLRSVIAFAQGFKASGTKVDVLVNNAGIFGVPNRRETADGLEMHIGVNHFGGHLLTRLMEPSINDGGRVLFLSSLTHSRPPGMPKTTWDWDNMNFDKPKTYDRLSAYCRSKLANIWDAKEFAKRLAARSINTYAVQPGLVKTEIHRGIGGGKLIMPIVNAGYAALGWVWLKGPLDGALTTIRCAVDPCLAGPELSGKYWGNMKEETPSELALDPANPPRLWEITESVLEDKLGKRVDDVFP 339          
BLAST of mRNA_Ecto-sp13_S_contig14597.3525.1 vs. uniprot
Match: D8LP30_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP30_ECTSI)

HSP 1 Score: 519 bits (1336), Expect = 1.850e-182
Identity = 247/263 (93.92%), Postives = 256/263 (97.34%), Query Frame = 1
Query:    1 QGVDLLDGLTDVDVRLEVLDLGSLHSVIAFAQRFKASGTKVDVLVNNAGVFGVPNRRETADGLEMHIGVNHFGGHLLTRLMEPLIKDGGRVLFLSSLAHSRPPGMPKTTWDWDNVNFDKPKTYDRLSAYCRSKLANIWDAKEFAKHLAARSINTYAVQPGLVKTEIHRGIGGGKLIMPIVNAGYVALGWVWLKGPLDGALTTIRCAVDPSLAGPELSGKYWGNMKEETPSELALDPANPPRLWEITESVLEEKLGMRVDGVLP 789
            +GVDLLDGLT+VDVRLEVLDLGSL SV+AFAQRFKASGTKVDVLVNNAG+FGVPNRRETADGLEM IGVNHFGGHLLTRLMEP + DGGRVLFLSSLAHSRPPGMPKTTWDWDNVNFDKPKTYDRLSAYCRSKLANIWDAKEFAK LAARSINTYAVQPGLVKTEIHRGIGGGKL+MPIVNAGYVALGWVWLKGPLDGALTT+RCAVDPSLAGPELSGKYWGNMKEETPSELALDPANPPRLWE+TESVLEEKLG RVD V+P
Sbjct:  224 EGVDLLDGLTEVDVRLEVLDLGSLQSVVAFAQRFKASGTKVDVLVNNAGIFGVPNRRETADGLEMQIGVNHFGGHLLTRLMEPSMNDGGRVLFLSSLAHSRPPGMPKTTWDWDNVNFDKPKTYDRLSAYCRSKLANIWDAKEFAKRLAARSINTYAVQPGLVKTEIHRGIGGGKLMMPIVNAGYVALGWVWLKGPLDGALTTVRCAVDPSLAGPELSGKYWGNMKEETPSELALDPANPPRLWEVTESVLEEKLGKRVDDVVP 486          
BLAST of mRNA_Ecto-sp13_S_contig14597.3525.1 vs. uniprot
Match: D8LPM3_ECTSI (Short-chain dehydrogenase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LPM3_ECTSI)

HSP 1 Score: 381 bits (978), Expect = 2.950e-130
Identity = 190/262 (72.52%), Postives = 210/262 (80.15%), Query Frame = 1
Query:    1 QGVDLLDGLTDVDVRLEVLDLGSLHSVIAFAQRFKASGTKVDVLVNNAGVFGVPNRRETADGLEMHIGVNHFGGHLLTRLMEPLIKDGGRVLFLSSLAHSRPPGMPKTTWDWDNVNFDKPKTYDRLSAYCRSKLANIWDAKEFAKHLAARSINTYAVQPGLVKTEIHRGIGGGKLIMPIVNAGYVALGWVWLKGPLDGALTTIRCAVDPSLAGPELSGKYWGNMKEETPSELALDPANPPRLWEITESVLEEKLGMRVDGVL 786
            +GVDLL+GLTDVDVRLEVLDLGSL SVIAFAQRFKASGTKVDVL+NNAG+  +P RRET DGLEM IGVNHFGGHLLTRLMEPL+ DGGRV+FLSSL H +PPG  K T D+DNVN++KP TY+   AY RSKLANI DAKEFAK L AR I+TYA  PG+V TE+ R +    L+  +       L    L  PL GALTTIRCAVDPSLAGPE SGKYWGNMKEETPSELALDPANPPRLWE+TESVLE KLG  VD +L
Sbjct:   75 EGVDLLEGLTDVDVRLEVLDLGSLQSVIAFAQRFKASGTKVDVLINNAGIMAIPERRETVDGLEMQIGVNHFGGHLLTRLMEPLMNDGGRVIFLSSLGHRQPPGQAKVTLDFDNVNYEKPDTYNSWMAYGRSKLANILDAKEFAKRLEARGISTYACHPGIVNTELMRNMTDSSLMSRVTRL-TAPLSRFILATPLTGALTTIRCAVDPSLAGPEFSGKYWGNMKEETPSELALDPANPPRLWEVTESVLEAKLGKNVDDLL 335          
BLAST of mRNA_Ecto-sp13_S_contig14597.3525.1 vs. uniprot
Match: D7FTL4_ECTSI (Similar to Retinol dehydrogenase 12 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTL4_ECTSI)

HSP 1 Score: 247 bits (631), Expect = 1.680e-79
Identity = 121/212 (57.08%), Postives = 147/212 (69.34%), Query Frame = 1
Query:  151 FGVPNRRETADGLEMHIGVNHFGGHLLTRLMEPLIKDGGRVLFLSSLAHSRPPGMPKTTWDWDNVNFDKPKTYDRLSAYCRSKLANIWDAKEFAKHLAARSINTYAVQPGLVKTEIHRGIGGGKLIMPIVNAGYVALGWVWLKGPLDGALTTIRCAVDPSLAGPELSGKYWGNMKEETPSELALDPANPPRLWEITESVLEEKLGMRVDGVL 786
              +P    T DGLE  IGVNHFG HLLTRLME  I DGGRV+FLSS+AH          WDWDNVN+ KP  Y  + AY RSKLAN+ DAK FA HL+ R INTYA+ PG+V T++ R +  G+LI  +      +LG   L  PL G+LTT+RCA+DP+LAGPE SGKYW +MK+  PS LA DPANPPRLWEITE +LE KLG +++ +L
Sbjct:    1 MAIPTEERTVDGLEKQIGVNHFGTHLLTRLMEKQIIDGGRVVFLSSVAHKH------GGWDWDNVNYTKPNKYVPMIAYGRSKLANVLDAKAFAGHLSDRRINTYALHPGVVNTDLFRNVTDGRLISRVFRVAK-SLGAFVLASPLTGSLTTLRCAIDPALAGPEFSGKYWSHMKQVQPSALASDPANPPRLWEITEELLETKLGKKIENLL 205          
BLAST of mRNA_Ecto-sp13_S_contig14597.3525.1 vs. uniprot
Match: A0A6H5JGN4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGN4_9PHAE)

HSP 1 Score: 198 bits (503), Expect = 3.800e-60
Identity = 99/175 (56.57%), Postives = 126/175 (72.00%), Query Frame = 1
Query:    4 GVDLLDGLTDVDVRLEVLDLGSLHSVIAFAQRFKASGTKVDVLVNNAGVFGVPNRRETADGLEMHIGVNHFGGHLLTRLMEPLIKDGGRVLFLSSLAHSRPPGMPKTTWDWDNVNFDKPKTYDRLSAYCRSKLANIWDAKEFAKHLAARSINTYAVQPGLVKTEIHRGIGGGKLI 528
            GVDLL+GL+DVDV++EVLDLG L SV++FAQR K+SG K+DVL++NAG+  +P  + + DGLE  IGVNHF  HLL+RLM   I DGGRV+F SS+AH           DWDNVN+ KP  +  + AY RSKLAN+ DAK FA HL+ R INTYA+ PG+V T++ R    G+LI
Sbjct:   29 GVDLLEGLSDVDVQVEVLDLGVLQSVVSFAQRLKSSGQKIDVLIDNAGIMAIPTEKRSVDGLEKQIGVNHFVTHLLSRLMGKQIIDGGRVVFFSSVAHKH------GGCDWDNVNYTKPNEHGPMIAYGRSKLANVLDAKGFAGHLSDRRINTYALHPGVVNTDLFRNATDGRLI 197          
BLAST of mRNA_Ecto-sp13_S_contig14597.3525.1 vs. uniprot
Match: A0A433SZU2_ELYCH (Uncharacterized protein n=1 Tax=Elysia chlorotica TaxID=188477 RepID=A0A433SZU2_ELYCH)

HSP 1 Score: 165 bits (417), Expect = 1.090e-45
Identity = 97/255 (38.04%), Postives = 146/255 (57.25%), Query Frame = 1
Query:   10 DLLDGLTDVDVRLEVLDLGSLHSVIAFAQRFKASGTKVDVLVNNAGVFGVPNRRETADGLEMHIGVNHFGGHLLTRLMEPLIK--DGGRVLFLSSLAHSRPPGMPKTTWDWDNVNFDKPKTYDRLSAYCRSKLANIWDAKEFAKHLAARSINTYAVQPGLVKTEIHRGIGGG--KLIMPIVNAGYVALGWVWLKGPLDGALTTIRCAVDPSLAGPELSGKYWGNMKEETPSELALDPANPPRLWEITESVLEEKL 762
            ++++   + DV ++ LDL S  S+  FA++F  + T++D+L+NNAGV   P +  T DGLEM IG NHFG  LLT L+   +K     R++ LSS+AH+        +  WD++N DK   Y   +AY +SKLANI    E +  L    +   +V PG V T++ R    G  KL+ P+          ++ K P+DGA TT+ CA+ P L   E+SGKY+ + KE+ PS      A+  RLWE+TE ++++KL
Sbjct:   56 EIVEETKNEDVVVQELDLASFESIQNFAKKFNETETRLDILINNAGVMACP-KTLTKDGLEMQIGTNHFGHFLLTNLLLDKLKACSPSRIVILSSMAHAF------ASIKWDDINSDKK--YGDWAAYGQSKLANILHCLELSNRLKGTGVTVNSVHPGGVNTDLQRHTNRGIFKLLKPLSK--------LFFKTPVDGAQTTLYCALSPDLE--EVSGKYFVDCKEKAPSRRGQSEADAKRLWELTEEIIQQKL 291          
BLAST of mRNA_Ecto-sp13_S_contig14597.3525.1 vs. uniprot
Match: A0A3S0Z7Y7_ELYCH (Uncharacterized protein n=1 Tax=Elysia chlorotica TaxID=188477 RepID=A0A3S0Z7Y7_ELYCH)

HSP 1 Score: 161 bits (407), Expect = 6.210e-44
Identity = 94/237 (39.66%), Postives = 139/237 (58.65%), Query Frame = 1
Query:   55 LDLGSLHSVIAFAQRFKASGTKVDVLVNNAGVFGVPNRRETADGLEMHIGVNHFGGHLLTRLMEPLIKDG--GRVLFLSSLAHSRPPGMPKTTWDWDNVNFDKPKTYDRLSAYCRSKLANIWDAKEFAKHLAARSINTYAVQPGLVKTEIHRGIGGGKLIMPIVNAGYVALGWVWLKGPLDGALTTIRCAVDPSLAGPELSGKYWGNMKEETPSELALDPANPPRLWEITESVLEEK 759
            LDL S  S+ AF   F  +  ++D+L+NNAGV   P R  T DGLEM +G NHFG  LLT L+   +K     R++ +SS AH+R  G+     ++D++N +K  +Y++++AY +SKLANI   KE  + L    +  YA+ PG+V TE+ R I       PI+      L ++ LK PL+GA TT+ CA++P  A   +SGKY+ + KE+ PS  A D     RLW+++  + E K
Sbjct:  123 LDLSSFESIRAFCDEFNRTEARLDILINNAGVMMCP-RMLTKDGLEMQLGTNHFGHFLLTNLLLDKLKASRPSRIVAVSSRAHTRTQGI-----NFDDINSEK--SYEKMTAYSQSKLANILHVKELTRRLEGTGVTAYALHPGVVATELPRHIALAN--NPIILFLTAPLRYILLKTPLEGAQTTLACALNP--AWETISGKYYSDCKEKEPSLPAQDAEAAKRLWDVSVEITEGK 347          
BLAST of mRNA_Ecto-sp13_S_contig14597.3525.1 vs. uniprot
Match: A0A433T4Q0_ELYCH (Uncharacterized protein n=1 Tax=Elysia chlorotica TaxID=188477 RepID=A0A433T4Q0_ELYCH)

HSP 1 Score: 152 bits (384), Expect = 1.210e-40
Identity = 95/235 (40.43%), Postives = 135/235 (57.45%), Query Frame = 1
Query:   55 LDLGSLHSVIAFAQRFKASGTKVDVLVNNAGVFGVPNRRETADGLEMHIGVNHFGGHLLTRLMEPLIKDGG--RVLFLSSLAHSRPPGMPKTTWDWDNVNFDKPKTYDRLSAYCRSKLANIWDAKEFAKHLAARSINTYAVQPGLVKTEIHRGIGGG--KLIMPIVNAGYVALGWVWLKGPLDGALTTIRCAVDPSLAGPELSGKYWGNMKEETPSELALDPANPPRLWEITESV 747
            LDL S  S+  FA +F  +  ++DVL+NNAG+   P+   T DGLEM IGVNHFG  LLT L+   +K     R++ +SSLAH           +++++N +K  +Y R+SAYC+SKLANI  A E  K L    +   ++ PG V TE+ R +  G  K+++  + A +V       K P  GA T+IR AVDPSL    +SGKY+ + K+   S  ALD     RLWE++E +
Sbjct:  121 LDLSSFESIREFANKFNDNEPRLDVLINNAGIMLCPHML-TKDGLEMQIGVNHFGHFLLTNLLMDKLKSSSPSRIVIVSSLAHRA------GVINFEDLNSEK--SYGRVSAYCQSKLANILHALELTKRLEGTGVTANSLHPGAVDTELGRYLVTGLPKVMLASILAPFV-------KSPAQGAQTSIRLAVDPSLE--TVSGKYFSDCKDTKTSAAALDENVAKRLWEVSEKI 337          
BLAST of mRNA_Ecto-sp13_S_contig14597.3525.1 vs. uniprot
Match: A0A6P8HMP7_ACTTE (retinol dehydrogenase 11-like n=1 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8HMP7_ACTTE)

HSP 1 Score: 149 bits (377), Expect = 7.300e-40
Identity = 91/235 (38.72%), Postives = 133/235 (56.60%), Query Frame = 1
Query:   40 VRLEVLDLGSLHSVIAFAQRFKASGTKVDVLVNNAGVFGVPNRRETADGLEMHIGVNHFGGHLLTRLMEPLIKDGG--RVLFLSSLAHSRPPGMPKTTWDWDNVNFDKPKTYDRLSAYCRSKLANIWDAKEFAKHLAARSINTYAVQPGLVKTEIHRGIGGGKLIMPIVNAGYVALGWVWLKGPLDGALTTIRCAVDPSLAGPELSGKYWGNMKEETPSELALDPANPPRLWEIT 738
            V LE LDL SL SV  FA++ K +  ++D+L+NNAGV   P    T DG E+ IGVNH G  LLT L+  L+K     RV+ LSSL H+       + + + N+N +K  TY ++ AY +SKLANI   KE A+ L    + TYAV PG V+TE+ R       I+    A +  + W+  K P+ GA T++ CAV   L G  ++G+Y+ +  E   SE + +  +   LW+++
Sbjct:   91 VYLEKLDLASLKSVREFAEKIKKNEPRLDILINNAGVMMCPYMT-TEDGFELQIGVNHLGHFLLTNLLLDLLKKSAPSRVINLSSLGHTM-----TSRFKFQNMNNEK--TYGKVEAYAQSKLANILFTKELARRLEGTGVTTYAVHPGTVETELDRHTFFSSSIL---GAPFRPIRWLTCKTPIQGAQTSLYCAVSEDLEG--VTGRYYADCAETPSSEASKNEEDAKTLWDVS 312          
BLAST of mRNA_Ecto-sp13_S_contig14597.3525.1 vs. uniprot
Match: UPI001BB29B72 (retinol dehydrogenase 13-like n=1 Tax=Lytechinus variegatus TaxID=7654 RepID=UPI001BB29B72)

HSP 1 Score: 147 bits (372), Expect = 5.420e-39
Identity = 93/233 (39.91%), Postives = 129/233 (55.36%), Query Frame = 1
Query:   55 LDLGSLHSVIAFAQRFKASGTKVDVLVNNAGVFGVPNRRETADGLEMHIGVNHFGGHLLTRLMEPLIKDGG--RVLFLSSLAHSRPPGMPKTTWDWDNVNFDKPKTYDRLSAYCRSKLANIWDAKEFAKHLAARSINTYAVQPGLVKTEIHRGIGGGKLIMPIVNAGYVALGWVWLKGPLDGALTTIRCAVDPSLAGPELSGKYWGNMKEETPSELA--LDPANPPRLWEITE 741
            LDL SL SV AF   F     ++D+LVNNAGVF  P  + T DG EM  GVNH G  LLT  +  ++K     RV+ +SS  H R         D+  +N D+ K Y++  +Y  SKLAN+   KE ++ L+ + + +Y + PG++ TE+ R +G  K       A    L W+++K P  GA TTI CAV   L   E+SGKY+GN KEE   E+    D A   +LWE++E
Sbjct:  105 LDLASLKSVNAFCDEFCNKIGRLDILVNNAGVFYTPYMK-TEDGFEMQFGVNHLGHFLLTNRLLNVLKASSPSRVIIVSSALHKR------GHLDFSKLNPDE-KEYNKAKSYADSKLANVLFGKELSRRLSGQGVTSYTLHPGVINTELSRYLGYSKAFW----AATFPLRWLFMKSPWYGAQTTIYCAVAEELK--EVSGKYYGNCKEEPYPEVRGPADDAVATKLWEVSE 323          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14597.3525.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JP92_9PHAE3.340e-18393.92Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LP30_ECTSI1.850e-18293.92Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LPM3_ECTSI2.950e-13072.52Short-chain dehydrogenase n=2 Tax=Ectocarpus TaxID... [more]
D7FTL4_ECTSI1.680e-7957.08Similar to Retinol dehydrogenase 12 n=1 Tax=Ectoca... [more]
A0A6H5JGN4_9PHAE3.800e-6056.57Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A433SZU2_ELYCH1.090e-4538.04Uncharacterized protein n=1 Tax=Elysia chlorotica ... [more]
A0A3S0Z7Y7_ELYCH6.210e-4439.66Uncharacterized protein n=1 Tax=Elysia chlorotica ... [more]
A0A433T4Q0_ELYCH1.210e-4040.43Uncharacterized protein n=1 Tax=Elysia chlorotica ... [more]
A0A6P8HMP7_ACTTE7.300e-4038.72retinol dehydrogenase 11-like n=1 Tax=Actinia tene... [more]
UPI001BB29B725.420e-3939.91retinol dehydrogenase 13-like n=1 Tax=Lytechinus v... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig14597contigEcto-sp13_S_contig14597:3407..4198 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start0
Seed ortholog score522.3
Seed ortholog evalue1.3e-145
Seed eggNOG ortholog2880.D8LP30
Model size792
Hectar predicted targeting categoryother localisation
Exons1
EggNOG free text desc.oxidation-reduction process
EggNOG OGsCOG1028@1,KOG1208@2759
Ec32 ortholog descriptionhypothetical protein
Ec32 orthologEc-06_006795.1
Cds size792
COG Functional cat.IQ
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462779.2686484-CDS-Ecto-sp13_S_contig14597:3406..41981681462779.2686484-CDS-Ecto-sp13_S_contig14597:3406..4198Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14597 3407..4198 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig14597.3525.1prot_Ecto-sp13_S_contig14597.3525.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig14597 3407..4198 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig14597.3525.1

>prot_Ecto-sp13_S_contig14597.3525.1 ID=prot_Ecto-sp13_S_contig14597.3525.1|Name=mRNA_Ecto-sp13_S_contig14597.3525.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=264bp
QGVDLLDGLTDVDVRLEVLDLGSLHSVIAFAQRFKASGTKVDVLVNNAGV
FGVPNRRETADGLEMHIGVNHFGGHLLTRLMEPLIKDGGRVLFLSSLAHS
RPPGMPKTTWDWDNVNFDKPKTYDRLSAYCRSKLANIWDAKEFAKHLAAR
SINTYAVQPGLVKTEIHRGIGGGKLIMPIVNAGYVALGWVWLKGPLDGAL
TTIRCAVDPSLAGPELSGKYWGNMKEETPSELALDPANPPRLWEITESVL
EEKLGMRVDGVLP*
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mRNA from alignment at Ecto-sp13_S_contig14597:3407..4198-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig14597.3525.1 ID=mRNA_Ecto-sp13_S_contig14597.3525.1|Name=mRNA_Ecto-sp13_S_contig14597.3525.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=792bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14597:3407..4198- (Ectocarpus species13 EcNAP12_S_4_19m)
CAGGGCGTGGATCTTCTCGACGGGCTGACCGACGTCGACGTGCGGTTGGA GGTCCTGGACCTGGGGTCCCTACATTCCGTTATCGCCTTCGCCCAGAGGT TCAAGGCCTCAGGCACCAAGGTCGACGTCCTCGTCAACAACGCCGGGGTT TTCGGCGTCCCAAATCGTCGAGAGACCGCGGATGGCCTGGAGATGCACAT CGGCGTCAACCACTTCGGCGGGCACCTGCTGACGAGGCTGATGGAGCCCT TGATCAAGGACGGCGGTCGAGTGTTGTTCCTCTCCTCCCTGGCGCACAGC CGGCCGCCGGGGATGCCGAAGACGACCTGGGACTGGGACAACGTAAACTT CGACAAGCCGAAGACCTACGACCGGCTGTCCGCCTACTGCAGGTCCAAGC TCGCCAACATCTGGGACGCCAAGGAGTTCGCCAAGCACCTGGCGGCCCGG AGCATCAACACCTACGCCGTCCAGCCCGGGCTGGTCAAGACAGAAATCCA CAGAGGCATCGGGGGGGGCAAGCTGATTATGCCGATCGTTAACGCCGGGT ACGTCGCGTTGGGGTGGGTTTGGCTGAAGGGGCCGCTGGACGGGGCCTTG ACCACGATCCGATGCGCGGTCGACCCGTCCCTGGCCGGCCCCGAGCTCTC GGGGAAGTACTGGGGCAATATGAAGGAGGAGACGCCTTCGGAGCTCGCGC TGGATCCCGCCAACCCGCCCCGGCTGTGGGAGATCACGGAGTCCGTGCTG GAGGAAAAGCTCGGCATGAGAGTTGACGGTGTTCTCCCCTGA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig14597:3407..4198-

>mRNA_Ecto-sp13_S_contig14597.3525.1 ID=mRNA_Ecto-sp13_S_contig14597.3525.1|Name=mRNA_Ecto-sp13_S_contig14597.3525.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=792bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14597:3407..4198- (Ectocarpus species13 EcNAP12_S_4_19m)
CAGGGCGTGGATCTTCTCGACGGGCTGACCGACGTCGACGTGCGGTTGGA
GGTCCTGGACCTGGGGTCCCTACATTCCGTTATCGCCTTCGCCCAGAGGT
TCAAGGCCTCAGGCACCAAGGTCGACGTCCTCGTCAACAACGCCGGGGTT
TTCGGCGTCCCAAATCGTCGAGAGACCGCGGATGGCCTGGAGATGCACAT
CGGCGTCAACCACTTCGGCGGGCACCTGCTGACGAGGCTGATGGAGCCCT
TGATCAAGGACGGCGGTCGAGTGTTGTTCCTCTCCTCCCTGGCGCACAGC
CGGCCGCCGGGGATGCCGAAGACGACCTGGGACTGGGACAACGTAAACTT
CGACAAGCCGAAGACCTACGACCGGCTGTCCGCCTACTGCAGGTCCAAGC
TCGCCAACATCTGGGACGCCAAGGAGTTCGCCAAGCACCTGGCGGCCCGG
AGCATCAACACCTACGCCGTCCAGCCCGGGCTGGTCAAGACAGAAATCCA
CAGAGGCATCGGGGGGGGCAAGCTGATTATGCCGATCGTTAACGCCGGGT
ACGTCGCGTTGGGGTGGGTTTGGCTGAAGGGGCCGCTGGACGGGGCCTTG
ACCACGATCCGATGCGCGGTCGACCCGTCCCTGGCCGGCCCCGAGCTCTC
GGGGAAGTACTGGGGCAATATGAAGGAGGAGACGCCTTCGGAGCTCGCGC
TGGATCCCGCCAACCCGCCCCGGCTGTGGGAGATCACGGAGTCCGTGCTG
GAGGAAAAGCTCGGCATGAGAGTTGACGGTGTTCTCCCCTGA
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