prot_Ecto-sp13_S_contig14580.3514.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig14580.3514.1
Unique Nameprot_Ecto-sp13_S_contig14580.3514.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length91
Homology
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BLAST of mRNA_Ecto-sp13_S_contig14580.3514.1 vs. uniprot
Match: D8LQ96_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ96_ECTSI)

HSP 1 Score: 139 bits (350), Expect = 2.400e-36
Identity = 76/91 (83.52%), Postives = 82/91 (90.11%), Query Frame = 0 
Query:    1 MFRSWRRLCSRFVSLNAAKGSSPAATPAATAVQVDVKEKGAAMAISSIGAVEEEGLERSNREKELKQLRAVAKIARACGDTDKRSLFRGWS 91
            MFRSW RLCS FVSLNAA+GSS AATPAA AV+VDV+ KG+A AISSI AVEEEG ERSNREKELK+LRAVAKI+RA GDTDKRSLFRGWS
Sbjct: 1806 MFRSWGRLCSHFVSLNAAEGSSAAATPAARAVEVDVEGKGSAKAISSIDAVEEEGFERSNREKELKRLRAVAKISRAYGDTDKRSLFRGWS 1896
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BLAST of mRNA_Ecto-sp13_S_contig14580.3514.1 vs. uniprot
Match: A0A6H5KKN4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKN4_9PHAE)

HSP 1 Score: 133 bits (334), Expect = 3.450e-34
Identity = 81/124 (65.32%), Postives = 84/124 (67.74%), Query Frame = 0 
Query:    1 MFRSWRRLCSRFVSLNAAKGSSPAATPAATAVQVDVKEKGAAMAISSIGAVEEEGLERSNREKELKQLRAVAK---------------------------------IARACGDTDKRSLFRGWS 91
            MFRSW RLCS FVSLNA KGSS AATPAA AVQVDV+EKGAAMAISSIGAVEEEG ERSNREKELK+LRAVAK                                 IARACGDT +RSLFRGWS
Sbjct: 1402 MFRSWGRLCSYFVSLNAVKGSSAAATPAARAVQVDVEEKGAAMAISSIGAVEEEGFERSNREKELKRLRAVAKVLGCLFRAPHAPNGCLTVGYKLWFFVASLLPSQIARACGDTGRRSLFRGWS 1525
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14580.3514.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LQ96_ECTSI2.400e-3683.52Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KKN4_9PHAE3.450e-3465.32Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig14580contigEcto-sp13_S_contig14580:693..1173 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig14580.3514.1mRNA_Ecto-sp13_S_contig14580.3514.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig14580 661..1173 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig14580.3514.1 ID=prot_Ecto-sp13_S_contig14580.3514.1|Name=mRNA_Ecto-sp13_S_contig14580.3514.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=91bp
MFRSWRRLCSRFVSLNAAKGSSPAATPAATAVQVDVKEKGAAMAISSIGA
VEEEGLERSNREKELKQLRAVAKIARACGDTDKRSLFRGWS
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