prot_Ecto-sp13_S_contig14531.3486.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig14531.3486.1
Unique Nameprot_Ecto-sp13_S_contig14531.3486.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length71
Homology
BLAST of mRNA_Ecto-sp13_S_contig14531.3486.1 vs. uniprot
Match: D7FIH1_ECTSI (Eukaryotic translation initiation factor 4E like2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIH1_ECTSI)

HSP 1 Score: 141 bits (356), Expect = 9.330e-41
Identity = 70/71 (98.59%), Postives = 70/71 (98.59%), Query Frame = 0
Query:    1 MFEEPNVVGIGMAIRSREDLLSVWNEDNSNEKVRFNIGERLKQVLDLEPSTLIEYKHHQTAMQDMSTFRCA 71
            MFEEPNVVGIGMAIRSREDLLSVWNEDNSNEKVRFNIGERLKQVLDLEPSTLIEYKHHQTAMQDMSTFR A
Sbjct:  140 MFEEPNVVGIGMAIRSREDLLSVWNEDNSNEKVRFNIGERLKQVLDLEPSTLIEYKHHQTAMQDMSTFRNA 210          
BLAST of mRNA_Ecto-sp13_S_contig14531.3486.1 vs. uniprot
Match: A0A836CBD6_9STRA (Putative eukaryotic initiation factor 4E n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBD6_9STRA)

HSP 1 Score: 107 bits (266), Expect = 3.540e-27
Identity = 51/71 (71.83%), Postives = 62/71 (87.32%), Query Frame = 0
Query:    2 FEEPNVVGIGMAIRSREDLLSVWNEDNS-NEKVRFNIGERLKQVLDLEPSTLIEYKHHQTAMQDMSTFRCA 71
            FEEP VVG+GMA+RS+EDLLSVWN DNS N+ VRF IGE+LK +LDLEPST+IEYKH  ++M+DMST+R A
Sbjct:  147 FEEPTVVGVGMAVRSKEDLLSVWNSDNSGNDAVRFAIGEKLKAILDLEPSTMIEYKHFASSMEDMSTYRHA 217          
BLAST of mRNA_Ecto-sp13_S_contig14531.3486.1 vs. uniprot
Match: F0W9A8_9STRA (Eukaryotic initiation factor 4E putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W9A8_9STRA)

HSP 1 Score: 99.4 bits (246), Expect = 2.180e-24
Identity = 46/71 (64.79%), Postives = 60/71 (84.51%), Query Frame = 0
Query:    1 MFEEPNVVGIGMAIRSREDLLSVWNEDNSNEKVRFNIGERLKQVLDLEPSTLIEYKHHQTAMQDMSTFRCA 71
            +F + NVVGI MAIRS+ED+LSVWN DNS + VRF+IGE+LK++L L+P+TLIEYK H  +++DMSTFR A
Sbjct:  122 LFGQANVVGIAMAIRSKEDMLSVWNADNSEDSVRFSIGEKLKEILMLDPNTLIEYKFHANSIRDMSTFRNA 192          
BLAST of mRNA_Ecto-sp13_S_contig14531.3486.1 vs. uniprot
Match: A0A8K1CP93_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CP93_PYTOL)

HSP 1 Score: 97.8 bits (242), Expect = 9.090e-24
Identity = 46/70 (65.71%), Postives = 59/70 (84.29%), Query Frame = 0
Query:    2 FEEPNVVGIGMAIRSREDLLSVWNEDNSNEKVRFNIGERLKQVLDLEPSTLIEYKHHQTAMQDMSTFRCA 71
            FEE +VVGI MAIRS+ED++SVWN DNSNE+ RF IGE+LK++L L+ +TLIEYK H  +++DMSTFR A
Sbjct:  129 FEELDVVGIAMAIRSKEDMISVWNADNSNEETRFKIGEKLKEILMLDANTLIEYKFHANSIKDMSTFRNA 198          
BLAST of mRNA_Ecto-sp13_S_contig14531.3486.1 vs. uniprot
Match: A0A2D4BW06_PYTIN (RNA helicase n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BW06_PYTIN)

HSP 1 Score: 101 bits (252), Expect = 1.730e-23
Identity = 48/70 (68.57%), Postives = 60/70 (85.71%), Query Frame = 0
Query:    2 FEEPNVVGIGMAIRSREDLLSVWNEDNSNEKVRFNIGERLKQVLDLEPSTLIEYKHHQTAMQDMSTFRCA 71
            FEE +VVGI MAIRS+ED+LSVWN DNSNE+ RF IGE+LK++L L+P+TLIEYK H  +++DMSTFR A
Sbjct:  809 FEELDVVGIAMAIRSKEDMLSVWNADNSNEETRFKIGEKLKEILMLDPNTLIEYKFHANSIKDMSTFRNA 878          
BLAST of mRNA_Ecto-sp13_S_contig14531.3486.1 vs. uniprot
Match: M4BUU5_HYAAE (Uncharacterized protein n=2 Tax=Peronosporaceae TaxID=4777 RepID=M4BUU5_HYAAE)

HSP 1 Score: 94.4 bits (233), Expect = 2.180e-23
Identity = 45/70 (64.29%), Postives = 58/70 (82.86%), Query Frame = 0
Query:    2 FEEPNVVGIGMAIRSREDLLSVWNEDNSNEKVRFNIGERLKQVLDLEPSTLIEYKHHQTAMQDMSTFRCA 71
            FEE +VVGI MAIRS+ED+LSVWN DNS++  RF IGE+LK++L L+ +TLIEYK H  +++DMSTFR A
Sbjct:   38 FEELDVVGIAMAIRSKEDMLSVWNADNSDDSTRFAIGEKLKEILMLDSNTLIEYKFHANSIRDMSTFRNA 107          
BLAST of mRNA_Ecto-sp13_S_contig14531.3486.1 vs. uniprot
Match: A0A024GBW3_9STRA (CBM20 domain-containing protein n=2 Tax=Albugo TaxID=65356 RepID=A0A024GBW3_9STRA)

HSP 1 Score: 98.6 bits (244), Expect = 2.110e-22
Identity = 45/71 (63.38%), Postives = 60/71 (84.51%), Query Frame = 0
Query:    1 MFEEPNVVGIGMAIRSREDLLSVWNEDNSNEKVRFNIGERLKQVLDLEPSTLIEYKHHQTAMQDMSTFRCA 71
            +F + NVVGI MAIRS+ED+LSVWN DN+ + VRF+IGE+LK++L L+P+TLIEYK H  +++DMSTFR A
Sbjct: 1316 VFNQANVVGIAMAIRSKEDMLSVWNADNTEDSVRFSIGEKLKEILMLDPNTLIEYKFHANSIRDMSTFRNA 1386          
BLAST of mRNA_Ecto-sp13_S_contig14531.3486.1 vs. uniprot
Match: A0A024TXL0_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces TaxID=100860 RepID=A0A024TXL0_9STRA)

HSP 1 Score: 93.6 bits (231), Expect = 3.380e-22
Identity = 43/70 (61.43%), Postives = 58/70 (82.86%), Query Frame = 0
Query:    2 FEEPNVVGIGMAIRSREDLLSVWNEDNSNEKVRFNIGERLKQVLDLEPSTLIEYKHHQTAMQDMSTFRCA 71
            FE  NVVGI MA+RS+ED++SVWN DNS++ +RF IGE+LK++L L+ +TLIEYK H  +++DMSTFR A
Sbjct:  122 FETLNVVGIAMALRSKEDMISVWNADNSDDNIRFAIGEKLKEILMLDSNTLIEYKFHANSIRDMSTFRNA 191          
BLAST of mRNA_Ecto-sp13_S_contig14531.3486.1 vs. uniprot
Match: H3GYW7_PHYRM (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=H3GYW7_PHYRM)

HSP 1 Score: 94.0 bits (232), Expect = 4.550e-22
Identity = 44/70 (62.86%), Postives = 58/70 (82.86%), Query Frame = 0
Query:    2 FEEPNVVGIGMAIRSREDLLSVWNEDNSNEKVRFNIGERLKQVLDLEPSTLIEYKHHQTAMQDMSTFRCA 71
            FEE +VVGI MAIRS+ED+LSVWN DNS++  RF IGE+LK++L L+ +TL+EYK H  +++DMSTFR A
Sbjct:  149 FEELDVVGIAMAIRSKEDMLSVWNADNSDDSTRFAIGEKLKEILMLDSNTLVEYKFHANSIRDMSTFRNA 218          
BLAST of mRNA_Ecto-sp13_S_contig14531.3486.1 vs. uniprot
Match: A0A485KQ57_9STRA (Aste57867_10365 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KQ57_9STRA)

HSP 1 Score: 94.0 bits (232), Expect = 5.660e-22
Identity = 44/70 (62.86%), Postives = 58/70 (82.86%), Query Frame = 0
Query:    2 FEEPNVVGIGMAIRSREDLLSVWNEDNSNEKVRFNIGERLKQVLDLEPSTLIEYKHHQTAMQDMSTFRCA 71
            FE  NVVGI MA+RS+ED++SVWN DNS++ VRF IGE+LK++L L+ +TLIEYK H  +++DMSTFR A
Sbjct:  165 FETLNVVGIAMALRSKEDMISVWNADNSDDNVRFAIGEKLKEILMLDSNTLIEYKFHANSIRDMSTFRNA 234          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14531.3486.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FIH1_ECTSI9.330e-4198.59Eukaryotic translation initiation factor 4E like2 ... [more]
A0A836CBD6_9STRA3.540e-2771.83Putative eukaryotic initiation factor 4E n=1 Tax=T... [more]
F0W9A8_9STRA2.180e-2464.79Eukaryotic initiation factor 4E putative n=1 Tax=A... [more]
A0A8K1CP93_PYTOL9.090e-2465.71Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A2D4BW06_PYTIN1.730e-2368.57RNA helicase n=1 Tax=Pythium insidiosum TaxID=1147... [more]
M4BUU5_HYAAE2.180e-2364.29Uncharacterized protein n=2 Tax=Peronosporaceae Ta... [more]
A0A024GBW3_9STRA2.110e-2263.38CBM20 domain-containing protein n=2 Tax=Albugo Tax... [more]
A0A024TXL0_9STRA3.380e-2261.43Uncharacterized protein n=3 Tax=Aphanomyces TaxID=... [more]
H3GYW7_PHYRM4.550e-2262.86Uncharacterized protein n=4 Tax=Phytophthora TaxID... [more]
A0A485KQ57_9STRA5.660e-2262.86Aste57867_10365 protein n=1 Tax=Aphanomyces stella... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023398Translation Initiation factor eIF- 4e-likeGENE3D3.30.760.10coord: 1..70
e-value: 6.7E-13
score: 50.6
IPR023398Translation Initiation factor eIF- 4e-likeSUPERFAMILY55418eIF4e-likecoord: 4..67
IPR001040Translation Initiation factor eIF- 4ePFAMPF01652IF4Ecoord: 4..55
e-value: 3.4E-9
score: 36.7
IPR001040Translation Initiation factor eIF- 4ePANTHERPTHR11960EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATEDcoord: 6..70
NoneNo IPR availablePANTHERPTHR11960:SF2EUKARYOTIC TRANSLATION INITIATION FACTOR 4E CLASS II 2Bcoord: 6..70

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig14531contigEcto-sp13_S_contig14531:3105..3677 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig14531.3486.1mRNA_Ecto-sp13_S_contig14531.3486.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig14531 3105..3707 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig14531.3486.1 ID=prot_Ecto-sp13_S_contig14531.3486.1|Name=mRNA_Ecto-sp13_S_contig14531.3486.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=71bp
MFEEPNVVGIGMAIRSREDLLSVWNEDNSNEKVRFNIGERLKQVLDLEPS
TLIEYKHHQTAMQDMSTFRCA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023398TIF_eIF4e-like
IPR001040TIF_eIF_4E