mRNA_Ecto-sp13_S_contig14519.3473.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig14519.3473.1 vs. uniprot
Match: A0A6H5JA26_9PHAE (PNP_UDP_1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JA26_9PHAE) HSP 1 Score: 425 bits (1092), Expect = 3.660e-148 Identity = 211/229 (92.14%), Postives = 218/229 (95.20%), Query Frame = 1
Query: 1 MSGGIKNVVVIVAMEAEASPLIERLGLVEDPDKFPAAAPSKCFSGSYQGAAINVVTNGKCSRFGVDQIGTVAAGLSTWLSVEAIKPDLVINAGTAGGFKKHDTAIGDVFISTSVKNHDRRIPIPGFKEFGIGNHESHPTPEMLKELGFKQGVVTTGSSFDHTETDDKMMEENDARVKDMEAAAVAWACEQHGTPLFCIKVVTDLVDGGGVGEVSGIRSPHEMPRCLSEA 687
MSGGIKNVVVIVAMEAEASPLIERLGLVEDPDKFPAAAPSKCFSGSYQGAAINVVTNGKCSRFGVDQ+GTVAAGLSTWLSVEAIKPDLVINAGTAGGFKKHDTAIGDVFISTSVKNHDRRIPIPGFKEFGIGNHESHPTPEMLKELGFKQGVV+TGSSFDHT+TDDKMMEENDARVKDMEAAAVAWACEQHGTPLFCIKVVTDLVDGGGVGE +++ L +A
Sbjct: 85 MSGGIKNVVVIVAMEAEASPLIERLGLVEDPDKFPAAAPSKCFSGSYQGAAINVVTNGKCSRFGVDQVGTVAAGLSTWLSVEAIKPDLVINAGTAGGFKKHDTAIGDVFISTSVKNHDRRIPIPGFKEFGIGNHESHPTPEMLKELGFKQGVVSTGSSFDHTKTDDKMMEENDARVKDMEAAAVAWACEQHGTPLFCIKVVTDLVDGGGVGEEEFLQNLKAASDSLQQA 313
BLAST of mRNA_Ecto-sp13_S_contig14519.3473.1 vs. uniprot
Match: D8LCX1_ECTSI (PNP_UDP_1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCX1_ECTSI) HSP 1 Score: 399 bits (1025), Expect = 3.170e-139 Identity = 197/214 (92.06%), Postives = 201/214 (93.93%), Query Frame = 1
Query: 46 AEASPLIERLGLVEDPDKFPAAAPSKCFSGSYQGAAINVVTNGKCSRFGVDQIGTVAAGLSTWLSVEAIKPDLVINAGTAGGFKKHDTAIGDVFISTSVKNHDRRIPIPGFKEFGIGNHESHPTPEMLKELGFKQGVVTTGSSFDHTETDDKMMEENDARVKDMEAAAVAWACEQHGTPLFCIKVVTDLVDGGGVGEVSGIRSPHEMPRCLSEA 687
AEA PLIERLGLVEDPDKFPAAAPSKCFSGSYQGAAINVVTNGKCSRFGVDQIGTVAAGLSTWLSVEAIKPD+VINAGTAGGFKKHDTAIGDVFISTSVKNHDRRIPIPGFKEFGIGNHESHP PEMLKELGFKQGVVTTGSSFDHTETDDKMMEENDARVKDMEAAAVAWACEQHGTPLFCIKVVTDLVDGGGVGE +++ L EA
Sbjct: 18 AEACPLIERLGLVEDPDKFPAAAPSKCFSGSYQGAAINVVTNGKCSRFGVDQIGTVAAGLSTWLSVEAIKPDIVINAGTAGGFKKHDTAIGDVFISTSVKNHDRRIPIPGFKEFGIGNHESHPAPEMLKELGFKQGVVTTGSSFDHTETDDKMMEENDARVKDMEAAAVAWACEQHGTPLFCIKVVTDLVDGGGVGEEEFLQNLKAASDSLQEA 231
BLAST of mRNA_Ecto-sp13_S_contig14519.3473.1 vs. uniprot
Match: A0A835YY09_9STRA (Nucleoside phosphorylase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YY09_9STRA) HSP 1 Score: 240 bits (613), Expect = 8.860e-77 Identity = 123/217 (56.68%), Postives = 148/217 (68.20%), Query Frame = 1
Query: 40 MEAEASPLIERLGLVEDPDKFPAAAPSKCFSGSYQGAAINVVTNGKCSRFGVDQIGTVAAGLSTWLSVEAIKPDLVINAGTAGGFKKHDTAIGDVFISTSVKNHDRRIPIPGFKEFGIGNHESHPTPEMLKELGFKQGVVTTGSSFDHTETDDKMMEENDARVKDMEAAAVAWACEQHG-TPLFCIKVVTDLVDGGGVGEVSGIRSPHEMPRCLSEA 687
MEAEA PLI+ L L D FPA+AP KC++ G ++VVTNGKC R GVD +GTVA GL+ WLS+E KPDLVINAGTAGGF + AIGDVF+S+ NHDRRI IPG+ E+G+G ++ PT ++ LG+K GVVTT +S D E D K M N+A VKDME AAVAWACEQH TP FCIKVVTD+VDG + + R L EA
Sbjct: 1 MEAEAQPLIDHLKLELDEAAFPASAPCKCYTSERNGYTMHVVTNGKCRRHGVDHVGTVAGGLAAWLSIEKFKPDLVINAGTAGGFNRMGAAIGDVFVSSRTVNHDRRIAIPGWTEWGVGKTDAVPTEQLRGALGYKHGVVTTSNSLDFIEEDAKHMLANEASVKDMEGAAVAWACEQHNNTPFFCIKVVTDIVDGDRPTHEEFLENLGAAARSLQEA 217
BLAST of mRNA_Ecto-sp13_S_contig14519.3473.1 vs. uniprot
Match: A0A7S0S4A1_9CHLO (Hypothetical protein n=1 Tax=Chlamydomonas leiostraca TaxID=1034604 RepID=A0A7S0S4A1_9CHLO) HSP 1 Score: 238 bits (608), Expect = 1.260e-75 Identity = 118/209 (56.46%), Postives = 153/209 (73.21%), Query Frame = 1
Query: 1 MSGGIKNVVVIVAMEAEASPLIERLGLV-EDPDKFPAAAPSKCFSGSYQGAAINVVTNGKCSRFGVDQIGTVAAGLSTWLSVEAIKPDLVINAGTAGGFKKHDTAIGDVFISTSVKNHDRRIPIPGFKEFGIGNHESHPTPEMLKELGFKQGVVTTGSSFDHTETDDKMMEENDARVKDMEAAAVAWACEQHGTPLFCIKVVTDLVDGG 624
MSG +K V+++ AMEAEA PLI RLGLV +DP K AP +SGS A++VV NG+C GVD +GTV A LST+L+V+A KPDLVI+AGTAGGFK +IGD+F+ST V NHDRRIP+P F ++G+G + PTP M+ LG K GVVT+G+S D+T+ +M+E++A VK+MEAAA+AW GTPL C+K VTD+VDGG
Sbjct: 16 MSGPVKTVLLVFAMEAEAQPLITRLGLVKDDPPKVLQPAPCVTYSGSLGSLAVHVVWNGRCGTHGVDNVGTVPAALSTYLAVQAFKPDLVISAGTAGGFKSQGASIGDIFVSTHVVNHDRRIPLPSFDQYGLGKASTLPTPNMVTSLGLKTGVVTSGNSLDYTDKCMDIMKEHEAAVKEMEAAAIAWVTALFGTPLVCVKAVTDIVDGG 224
BLAST of mRNA_Ecto-sp13_S_contig14519.3473.1 vs. uniprot
Match: W7TST5_9STRA (Nucleoside phosphorylase domain protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TST5_9STRA) HSP 1 Score: 236 bits (602), Expect = 1.350e-74 Identity = 118/226 (52.21%), Postives = 157/226 (69.47%), Query Frame = 1
Query: 10 GIKNVVVIVAMEAEASPLIERLGLVEDPDKFPAAAPSKCFSGSYQGAAINVVTNGKCSRFGVDQIGTVAAGLSTWLSVEAIKPDLVINAGTAGGFKKHDTAIGDVFISTSVKNHDRRIPIPGFKEFGIGNHESHPTPEMLKELGFKQGVVTTGSSFDHTETDDKMMEENDARVKDMEAAAVAWACEQHGTPLFCIKVVTDLVDGGGVGEVSGIRSPHEMPRCLSEA 687
GIK++V+ +AME EA PLI +LGL + + F AAP CF+G+Y + +VTNGK +FG D +GTV A L+T+L+VE +KPDL+INAGTAGGF+ AIGDV IS+++ NHDRR+ +P F ++G+ NH++ TP + + L FK GVV+TG+S DH E DD +M NDA VKDMEAAAVAWA E + P F +KVVTD+VDG E + + R L EA
Sbjct: 29 GIKSIVITIAMEGEAMPLITKLGLTQQSNYFGHAAPFHCFTGTYNNYNLAIVTNGKDRKFGCDNVGTVPAALATYLAVEQLKPDLLINAGTAGGFESKGMAIGDVLISSTIHNHDRRMLLPIFVDYGVHNHKAVETPRLREALKFKLGVVSTGNSLDHVEADDALMAANDASVKDMEAAAVAWAAELYSVPYFALKVVTDIVDGAHATEEEFVANFAMAQRRLQEA 254
BLAST of mRNA_Ecto-sp13_S_contig14519.3473.1 vs. uniprot
Match: A0A1D1ZX64_AUXPR (PNP_UDP_1 domain-containing protein n=1 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A1D1ZX64_AUXPR) HSP 1 Score: 231 bits (590), Expect = 1.140e-72 Identity = 110/204 (53.92%), Postives = 151/204 (74.02%), Query Frame = 1
Query: 13 IKNVVVIVAMEAEASPLIERLGLVED-PDKFPAAAPSKCFSGSYQGAAINVVTNGKCSRFGVDQIGTVAAGLSTWLSVEAIKPDLVINAGTAGGFKKHDTAIGDVFISTSVKNHDRRIPIPGFKEFGIGNHESHPTPEMLKELGFKQGVVTTGSSFDHTETDDKMMEENDARVKDMEAAAVAWACEQHGTPLFCIKVVTDLVDG 621
IK ++V++AMEAEA+PLI+ LGLV+D P P AP FSGS+ GA ++VV NGKC + GVD +GTV A L+ +L+++A PDLVI+ GTAGGF AIGDVF+ST+ NHDRRIPIPGF ++G+G H + PTP++ LG K G+V++G+S D+ E D ++M E+D VK+MEAAA+AW+ G P+F +K +TD+VDG
Sbjct: 37 IKRILVLIAMEAEAAPLIQALGLVQDTPRVIPEPAPCVSFSGSHAGAHVHVVVNGKCGKHGVDNVGTVPAALTAYLALQAFDPDLVISTGTAGGFGAQGAAIGDVFLSTATVNHDRRIPIPGFDQYGLGLHAALPTPQLQAALGLKAGLVSSGNSLDYVERDMEIMREHDTSVKEMEAAAIAWSASLFGVPMFSVKAITDIVDG 240
BLAST of mRNA_Ecto-sp13_S_contig14519.3473.1 vs. uniprot
Match: A0A087SFB9_AUXPR (5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 2 n=2 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A087SFB9_AUXPR) HSP 1 Score: 225 bits (574), Expect = 2.340e-70 Identity = 107/201 (53.23%), Postives = 148/201 (73.63%), Query Frame = 1
Query: 13 IKNVVVIVAMEAEASPLIERLGLVED-PDKFPAAAPSKCFSGSYQGAAINVVTNGKCSRFGVDQIGTVAAGLSTWLSVEAIKPDLVINAGTAGGFKKHDTAIGDVFISTSVKNHDRRIPIPGFKEFGIGNHESHPTPEMLKELGFKQGVVTTGSSFDHTETDDKMMEENDARVKDMEAAAVAWACEQHGTPLFCIKVVTDL 612
IK ++V++AMEAEA+PLI+ LGLV+D P P AP FSGS+ GA ++VV NGKC + GVD +GTV A L+ +L+++A PDLVI+ GTAGGF AIGDVF+ST+ NHDRRIPIPGF ++G+G H + PTP++ LG K G+V++G+S D+ E D ++M E+D VK+MEAAA+AW+ G P+F +K +TD+
Sbjct: 37 IKRILVLIAMEAEAAPLIQALGLVQDTPRVIPEPAPCVSFSGSHAGAHVHVVVNGKCGKHGVDNVGTVPAALTAYLALQAFDPDLVISTGTAGGFGAQGAAIGDVFLSTATVNHDRRIPIPGFDQYGLGLHAALPTPQLQAALGLKAGLVSSGNSLDYVERDMEIMREHDTSVKEMEAAAIAWSASLFGVPMFSVKAITDI 237
BLAST of mRNA_Ecto-sp13_S_contig14519.3473.1 vs. uniprot
Match: A0A7S0Y7R1_9CHLO (Hypothetical protein n=1 Tax=Polytomella parva TaxID=51329 RepID=A0A7S0Y7R1_9CHLO) HSP 1 Score: 224 bits (570), Expect = 6.060e-70 Identity = 113/214 (52.80%), Postives = 151/214 (70.56%), Query Frame = 1
Query: 7 GGIKNVVVIVAMEAEASPLIERLGLVED-PDKFPAAAPSKCFSGSYQGAAINVVTNGKCSRFGVDQIGTVAAGLSTWLSVEAIKPDLVINAGTAGGFKKHDTAIGDVFISTSVKNHDRRIPIPGFKEFGIGNHESHPTPEMLKELGFKQGVVTTGSSFDHTETDDKMMEENDARVKDMEAAAVAWAC----EQHGT---PLFCIKVVTDLVDGG 624
G IK VV AMEAEA+P I+ LGL++D P K P P+ FSG Y+G ++VV NGK FGVD +GTV A L+++L+++A+ PD+VI+AGTAGGFK AIGDVF+ T V NHDRRIPIPGF +GIG PTP++ LG K+GV+++G+S D+T++ K+ME +K+ME+AA+AW+C + GT PL CIK VTD+VDGG
Sbjct: 6 GPIKTVVFFFAMEAEATPFIQALGLIKDEPSKLPGPIPAVSFSGDYEGLKVHVVWNGKDPLFGVDNVGTVPASLTSYLAIQALHPDIVISAGTAGGFKSKTAAIGDVFLGTHVVNHDRRIPIPGFDAYGIGRQLCLPTPQLRAALGLKEGVISSGNSLDYTDSCLKIMEAEGVAIKEMESAAIAWSCRLFVDASGTTPLPLICIKAVTDIVDGG 219
BLAST of mRNA_Ecto-sp13_S_contig14519.3473.1 vs. uniprot
Match: A0A6S9GE08_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9GE08_HETAK) HSP 1 Score: 221 bits (564), Expect = 5.060e-69 Identity = 114/227 (50.22%), Postives = 146/227 (64.32%), Query Frame = 1
Query: 7 GGIKNVVVIVAMEAEASPLIERLGLVEDPDKFPAAAPSKCFSGSYQGAAINVVTNGKCSRFGVDQIGTVAAGLSTWLSVEAIKPDLVINAGTAGGFKKHDTAIGDVFISTSVKNHDRRIPIPGFKEFGIGNHESHPTPEMLKELGFKQGVVTTGSSFDHTETDDKMMEENDARVKDMEAAAVAWACEQHGTPLFCIKVVTDLVDGGGVGEVSGIRSPHEMPRCLSEA 687
G I ++VI+AM+AEA PLI+ LGL E F P+KCFSG G ++VV NG+ +FG D +GTV A L+T+ ++ + PDL+INAGTAGGF++ IGD+F+ST KNHDRRI IP F E+ G +E T M KELGFK G+VTTG+S DH DD++M ENDA VKDMEAAA+A TP F +K VTD+VDG + + R L EA
Sbjct: 14 GKINRIMVIIAMQAEAQPLIDCLGLTEQSSVFSGPLPAKCFSGLVDGCNVDVVVNGQDPKFGNDSVGTVCAALTTYEGLKTLSPDLLINAGTAGGFRRKGAEIGDIFLSTECKNHDRRIAIPSFTEWATGAYECVSTANMQKELGFKCGIVTTGNSLDHEPKDDELMLENDASVKDMEAAAIASTAALFETPFFAVKSVTDIVDGNVPTHEEFLENLSAAARSLQEA 240
BLAST of mRNA_Ecto-sp13_S_contig14519.3473.1 vs. uniprot
Match: A0A835W7S0_CHLIN (PNP_UDP_1 domain-containing protein n=5 Tax=Chlamydomonas TaxID=3052 RepID=A0A835W7S0_CHLIN) HSP 1 Score: 220 bits (560), Expect = 1.310e-68 Identity = 110/204 (53.92%), Postives = 146/204 (71.57%), Query Frame = 1
Query: 13 IKNVVVIVAMEAEASPLIERLGLVED-PDKFPAAAPSKCFSGSYQGAAINVVTNGKCSRFGVDQIGTVAAGLSTWLSVEAIKPDLVINAGTAGGFKKHDTAIGDVFISTSVKNHDRRIPIPGFKEFGIGNHESHPTPEMLKELGFKQGVVTTGSSFDHTETDDKMMEENDARVKDMEAAAVAWACEQHGTPLFCIKVVTDLVDG 621
IK+V+++ AMEAEA PLI+ LGL ED P K AP FSG ++G A++VV NGKC GVD +GTV A LST+L+V A KPD+VI+AGT GGFK AIGDVF+ T+V NHDRRIP+P F ++G+G+ TP + LG K GVV++G+S D+T+ ++M + A +K+MEAAA+AWAC + PL C+K VTD+VDG
Sbjct: 2 IKSVLLVFAMEAEAQPLIQALGLKEDVPAKIVGPAPCVTFSGEHEGLAVHVVWNGKCKDHGVDNVGTVPASLSTYLAVLAFKPDVVISAGTCGGFKAQGAAIGDVFLGTAVINHDRRIPLPAFDKYGLGHAALLATPHLQAALGLKSGVVSSGNSLDYTDKCMEIMTSHGAALKEMEAAAIAWACALYKVPLMCVKAVTDIVDG 205 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14519.3473.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig14519.3473.1 >prot_Ecto-sp13_S_contig14519.3473.1 ID=prot_Ecto-sp13_S_contig14519.3473.1|Name=mRNA_Ecto-sp13_S_contig14519.3473.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=239bp MSGGIKNVVVIVAMEAEASPLIERLGLVEDPDKFPAAAPSKCFSGSYQGAback to top mRNA from alignment at Ecto-sp13_S_contig14519:538..3958- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig14519.3473.1 ID=mRNA_Ecto-sp13_S_contig14519.3473.1|Name=mRNA_Ecto-sp13_S_contig14519.3473.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3421bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14519:538..3958- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig14519:538..3958- >mRNA_Ecto-sp13_S_contig14519.3473.1 ID=mRNA_Ecto-sp13_S_contig14519.3473.1|Name=mRNA_Ecto-sp13_S_contig14519.3473.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=717bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14519:538..3958- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |