mRNA_Ecto-sp13_S_contig14503.3463.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
|
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig14503.3463.1 vs. uniprot
Match: A0A7S3B7Q8_9VIRI (Hypothetical protein (Fragment) n=1 Tax=Prasinoderma singulare TaxID=676789 RepID=A0A7S3B7Q8_9VIRI) HSP 1 Score: 59.7 bits (143), Expect = 4.470e-9 Identity = 28/53 (52.83%), Postives = 39/53 (73.58%), Query Frame = 1
Query: 4 LAKMLRLAQIDDGDVFLDMGSGTGKACVAAGLLYPNLSVCRGVEILDGLHREA 162
+A++L A +GD FLD+GSG+GKA +AA L+ P+L+ RG+EIL LH EA
Sbjct: 123 VARVLDAAHAREGDTFLDLGSGSGKAVIAAALVRPDLASVRGIEILPELHTEA 175
BLAST of mRNA_Ecto-sp13_S_contig14503.3463.1 vs. uniprot
Match: A0A812VUJ9_9DINO (Hypothetical protein n=1 Tax=Symbiodinium sp. CCMP2592 TaxID=631055 RepID=A0A812VUJ9_9DINO) HSP 1 Score: 59.7 bits (143), Expect = 6.890e-9 Identity = 27/55 (49.09%), Postives = 39/55 (70.91%), Query Frame = 1
Query: 1 YLAKMLRLAQIDDGDVFLDMGSGTGKACVAAGLLYPNLSVCRGVEILDGLHREAQ 165
+ A + R+AQ G+ FLD+GSGTG+A +AA L +P+L CRG E+L+ LH A+
Sbjct: 840 FCALLQRVAQPQPGETFLDLGSGTGRALLAAALGFPSLRCCRGYELLEPLHAAAE 894
BLAST of mRNA_Ecto-sp13_S_contig14503.3463.1 vs. uniprot
Match: A0A812UV67_SYMPI (ANK1 protein (Fragment) n=1 Tax=Symbiodinium pilosum TaxID=2952 RepID=A0A812UV67_SYMPI) HSP 1 Score: 55.8 bits (133), Expect = 2.170e-8 Identity = 25/49 (51.02%), Postives = 34/49 (69.39%), Query Frame = 1
Query: 19 RLAQIDDGDVFLDMGSGTGKACVAAGLLYPNLSVCRGVEILDGLHREAQ 165
R+AQ G+ FLD+GSG+G+A +AA L +P L CRG E+L LH A+
Sbjct: 43 RVAQPQPGETFLDLGSGSGRAVLAAALAFPGLRCCRGYELLGPLHAAAE 91
BLAST of mRNA_Ecto-sp13_S_contig14503.3463.1 vs. uniprot
Match: A0A7R9UEU9_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UEU9_9STRA) HSP 1 Score: 54.7 bits (130), Expect = 1.470e-7 Identity = 26/55 (47.27%), Postives = 38/55 (69.09%), Query Frame = 1
Query: 1 YLAKMLRLAQIDDGDVFLDMGSGTGKACVAAGLLYPNLSVCRGVEILDGLHREAQ 165
+LA ++R + G+VFLD+GSG GKA + A LYP+L+ G+EIL L+R A+
Sbjct: 17 WLATLMRQVEPAAGEVFLDLGSGMGKAVLGAAALYPDLAKSAGIEILPKLNRRAK 71
BLAST of mRNA_Ecto-sp13_S_contig14503.3463.1 vs. uniprot
Match: A0A7R9TQT8_9VIRI (Hypothetical protein n=1 Tax=Prasinoderma coloniale TaxID=156133 RepID=A0A7R9TQT8_9VIRI) HSP 1 Score: 54.7 bits (130), Expect = 2.920e-7 Identity = 26/49 (53.06%), Postives = 36/49 (73.47%), Query Frame = 1
Query: 40 GDVFLDMGSGTGKACVAAGLLYPNLSVCRGVEILDGLHRE---AQVRHD 177
G+ FLD+GSG+GKA +AA L P+L+ C+G+EIL LH E A+ R+D
Sbjct: 89 GERFLDLGSGSGKAVIAAALARPDLAACQGIEILPSLHAESVAAKERYD 137
BLAST of mRNA_Ecto-sp13_S_contig14503.3463.1 vs. uniprot
Match: A0A7S4IJ33_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4IJ33_9STRA) HSP 1 Score: 53.9 bits (128), Expect = 7.390e-7 Identity = 22/43 (51.16%), Postives = 33/43 (76.74%), Query Frame = 1
Query: 37 DGDVFLDMGSGTGKACVAAGLLYPNLSVCRGVEILDGLHREAQ 165
DG VF D+GSGTG+ ++A L+P + +CRG+E+L G+HR A+
Sbjct: 157 DGMVFADIGSGTGRLVLSAAALHPGMRLCRGLELLPGIHRLAE 199
BLAST of mRNA_Ecto-sp13_S_contig14503.3463.1 vs. uniprot
Match: A0A7S3V4P1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V4P1_9STRA) HSP 1 Score: 52.4 bits (124), Expect = 1.480e-6 Identity = 22/54 (40.74%), Postives = 33/54 (61.11%), Query Frame = 1
Query: 37 DGDVFLDMGSGTGKACVAAGLLYPNLSVCRGVEILDGLH-------REAQVRHD 177
DG FLD+GSG G+ + L+P + +C+G+EIL GLH + ++RHD
Sbjct: 19 DGKTFLDIGSGAGRLVIGVAALHPGIKLCKGLEILPGLHDASLQSLEKCRIRHD 72
BLAST of mRNA_Ecto-sp13_S_contig14503.3463.1 vs. uniprot
Match: A0A7S0HXH4_9CRYP (Histone-lysine N-methyltransferase, H3 lysine-79 specific (Fragment) n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0HXH4_9CRYP) HSP 1 Score: 50.1 bits (118), Expect = 3.100e-6 Identity = 24/57 (42.11%), Postives = 36/57 (63.16%), Query Frame = 1
Query: 7 AKMLRLAQIDDGDVFLDMGSGTGKACVAAGLLYPNLSVCRGVEILDGLHREAQVRHD 177
A++L L Q G+ F+D+GSGTGKA + A L+P S G+E ++ LH+ A H+
Sbjct: 8 AEILHLVQPKQGETFVDLGSGTGKAVIVAASLFP-FSEAIGIEFVEPLHKAATRLHE 63
BLAST of mRNA_Ecto-sp13_S_contig14503.3463.1 vs. uniprot
Match: A0A0G4EMU0_VITBC (DOT1 domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4EMU0_VITBC) HSP 1 Score: 52.0 bits (123), Expect = 3.260e-6 Identity = 22/49 (44.90%), Postives = 32/49 (65.31%), Query Frame = 1
Query: 1 YLAKMLRLAQIDDGDVFLDMGSGTGKACVAAGLLYPNLSVCRGVEILDG 147
+LA +LR A+ G+ F+D+GSG G+A + A LYP+ C G+E L G
Sbjct: 138 FLAVLLRAAEPKQGETFVDLGSGLGRAVLGAAALYPSFRKCTGIEYLQG 186
BLAST of mRNA_Ecto-sp13_S_contig14503.3463.1 vs. uniprot
Match: A0A418NVJ1_9SPHN (Methyltransferase domain-containing protein n=1 Tax=Aurantiacibacter zhengii TaxID=2307003 RepID=A0A418NVJ1_9SPHN) HSP 1 Score: 50.4 bits (119), Expect = 6.860e-6 Identity = 27/55 (49.09%), Postives = 38/55 (69.09%), Query Frame = 1
Query: 4 LAKMLRLAQIDDGDVFLDMGSGTGKACVAAGLLYPNLSVCRGVEILDGLHREAQV 168
+++MLRLA+I+DGDV D+GSG G+ +AA Y +V G+EI DGL EA+
Sbjct: 35 VSEMLRLAEIEDGDVLYDLGSGDGRIPIAAAREYGIRAV--GIEIDDGLLEEARA 87 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14503.3463.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig14503.3463.1 >prot_Ecto-sp13_S_contig14503.3463.1 ID=prot_Ecto-sp13_S_contig14503.3463.1|Name=mRNA_Ecto-sp13_S_contig14503.3463.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=58bp MLRLAQIDDGDVFLDMGSGTGKACVAAGLLYPNLSVCRGVEILDGLHREAback to top mRNA from alignment at Ecto-sp13_S_contig14503:3563..3748+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig14503.3463.1 ID=mRNA_Ecto-sp13_S_contig14503.3463.1|Name=mRNA_Ecto-sp13_S_contig14503.3463.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=186bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14503:3563..3748+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig14503:3563..3748+ >mRNA_Ecto-sp13_S_contig14503.3463.1 ID=mRNA_Ecto-sp13_S_contig14503.3463.1|Name=mRNA_Ecto-sp13_S_contig14503.3463.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=174bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14503:3563..3748+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |