mRNA_Ecto-sp13_S_contig14452.3424.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig14452.3424.1 vs. uniprot
Match: D7G1Q4_ECTSI (Ammonium transporter n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1Q4_ECTSI) HSP 1 Score: 497 bits (1279), Expect = 1.530e-174 Identity = 248/254 (97.64%), Postives = 250/254 (98.43%), Query Frame = 1
Query: 1 LIYGVIITSLIYPVVAHWVWAPSGWASSFRANEEDLLVGCGVADFSGSGVVHLTGRGLMALVAAFCVHPRGGRFDAEGKPRRLERQSPALNVLGTLILWAGWFFFNASGVASFSRQPDDAAKSMLNTAVCPSAAVVVTMLIHWMYHRSFDPFMATNGMLGGLVAITASSPLVQAEGAFVIGVVSGALVFYGSKLLLKFKIDDVVDASVVHGLCGLWGMVATGLFTTKLGYARAYAEDRADECCGVFYGCSGSLL 762
LIYGVIITSLIYPVVAHWVWA SGWASSFRA + DLLVGCGVADFSGSGVVHLTG GLMALVAAFCVHPRGGRFDAEGKPRRLERQSPALNVLGTLILWAGWFFFNASGVASFSRQPDDAAKSMLNTAVCPSAAVVVTMLIHWMYHRSFDPFMATNGMLGGLVAITASSPLVQAEGAFVIGVVSGALVFYGSKLLLKFKIDDVVDASVVHGLCGLWGMVATGLFTT+LGYARAYAEDRADECCGVFYGCSGSLL
Sbjct: 106 LIYGVIITSLIYPVVAHWVWARSGWASSFRA-DGDLLVGCGVADFSGSGVVHLTG-GLMALVAAFCVHPRGGRFDAEGKPRRLERQSPALNVLGTLILWAGWFFFNASGVASFSRQPDDAAKSMLNTAVCPSAAVVVTMLIHWMYHRSFDPFMATNGMLGGLVAITASSPLVQAEGAFVIGVVSGALVFYGSKLLLKFKIDDVVDASVVHGLCGLWGMVATGLFTTRLGYARAYAEDRADECCGVFYGCSGSLL 357
BLAST of mRNA_Ecto-sp13_S_contig14452.3424.1 vs. uniprot
Match: A0A6H5JVJ2_9PHAE (Ammonium transporter n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVJ2_9PHAE) HSP 1 Score: 269 bits (687), Expect = 1.600e-82 Identity = 140/258 (54.26%), Postives = 174/258 (67.44%), Query Frame = 1
Query: 7 YGVIITSLIYPVVAHWVWAPSGWASSFRANEED--LLVGCGVADFSGSGVVHLTGRGLMALVAAFCVHPRGGRFDAEGKPRRLERQSPALNVLGTLILWAGWFFFNASGVASFSR-QPDDAAKSMLNTAVCPSAAVVVTMLIHWMYHRSFDPFMATNGMLGGLVAITASSPLVQAEGAFVIGVVSGALVFYGSKLLLKFKIDDVVDASVVHGLCGLWGMVATGLFTTKLGYARAYAE---DRADECCGVFYGCSGSLL 762
Y + +TS IYPVV HW W P GWAS +R +E LL GCG ADF+GSGVVH+ G G+ ALVAA V PR RF G RL +QSPAL LGTLILW GW+ FNA + S + AA+++++T + PSA V+V ++ M + FD NG+L GLVA+T+ +PLV EGAFV+GVVS L + + LLLK KIDDVVDA+ VH CG+WGM+ TGLFTT+ G+A Y DRADECCGVFYGC +LL
Sbjct: 158 YAIALTSFIYPVVVHWAWHPDGWASPYRTADEGAPLLSGCGAADFAGSGVVHMVG-GIAALVAAIAVKPRKSRF-RHGHACRLPQQSPALQTLGTLILWVGWYAFNAGSTITISGGRSVVAARAVVSTTIGPSAGVLVMVIAVKMLEKKFDTRGVNNGILSGLVAVTSGAPLVDPEGAFVMGVVSAFLYYASANLLLKLKIDDVVDAAPVHMFCGMWGMIGTGLFTTREGWALTYGAAGGDRADECCGVFYGCGFNLL 413
BLAST of mRNA_Ecto-sp13_S_contig14452.3424.1 vs. uniprot
Match: D7G265_ECTSI (Ammonium transporter n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G265_ECTSI) HSP 1 Score: 249 bits (635), Expect = 7.790e-77 Identity = 121/253 (47.83%), Postives = 170/253 (67.19%), Query Frame = 1
Query: 4 IYGVIITSLIYPVVAHWVWAPSGWASSFRANEEDLLVGCGVADFSGSGVVHLTGRGLMALVAAFCVHPRGGRFDAEGKPRRLERQSPALNVLGTLILWAGWFFFNASGVASFSRQPDDAAKSMLNTAVCPSAAVVVTMLIHWMYHRSFDPFMATNGMLGGLVAITASSPLVQAEGAFVIGVVSGALVFYGSKLLLKFKIDDVVDASVVHGLCGLWGMVATGLFTTKLGYARAYAEDRADECCGVFYGCSGSLL 762
++ ++TS IYP+VAHW W+ GWAS+ A+++DLL GCGV DF+GSGVVH+TG G+ AL+ F + PR GRF+ +G + +QS L LGT +LW GW FNA V+SF P AAK M T + ++ + ++L++ + +D A NG+L GLV+ITA S + EGAFV+GV+ G L F+ S LLL+ +DDVV+A+ VH G+WG+V+ GLF++K YA AY+EDR+D C G+ YG SG L
Sbjct: 139 LHSFLLTSFIYPIVAHWAWSDGGWASARLADDDDLLFGCGVTDFAGSGVVHMTG-GMAALMGIFILGPRAGRFNEDGTSNTMPQQSAVLQTLGTFMLWWGWLGFNAGSVSSFVATPAVAAKVMGVTVIGGASGGITSLLVNKLQCGYWDTGSALNGILTGLVSITAGSGTYEPEGAFVVGVLGGVLYFFASNLLLRNHLDDVVNAAPVHLFGGMWGLVSAGLFSSKFAYAMAYSEDRSDTCAGILYGGSGGTL 390
BLAST of mRNA_Ecto-sp13_S_contig14452.3424.1 vs. uniprot
Match: D8LEG5_ECTSI (Ammonium transporter n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEG5_ECTSI) HSP 1 Score: 251 bits (640), Expect = 6.300e-76 Identity = 130/246 (52.85%), Postives = 165/246 (67.07%), Query Frame = 1
Query: 43 VAHWVWAPSGWASSFRANEED--LLVGCGVADFSGSGVVHLTGRGLMALVAAFCVHPRGGRFDAEGKPRRLERQSPALNVLGTLILWAGWFFFNASGVASFSR-QPDDAAKSMLNTAVCPSAAVVVTMLIHWMYHRSFDPFMATNGMLGGLVAITASSPLVQAEGAFVIGVVSGALVFYGSKLLLKFKIDDVVDASVVHGLCGLWGMVATGLFTTKLGYARAYAE---DRADECCGVFYGCSGSLL 762
V HW W P GWAS +R +E LL GCG ADF+GSGVVH+ G G+ ALVAA V PR RF G+ RL +QSPAL LGTLILW GW+ FNA + S + AA+++++T + PSA V+V ++ M + FD NG+L GLVA+T+ +PLV EGAFVIGV+S + + LLLK KIDDVVDA+ VH CG+WG++ TGLFTT+ G+A Y DRADECCG+FYGC +LL
Sbjct: 119 VVHWAWHPDGWASPYRTADEGAPLLSGCGAADFAGSGVVHMVG-GVAALVAAIAVKPRKSRF-RHGRACRLPQQSPALQTLGTLILWVGWYAFNAGSTITISGGRSVVAARAVVSTTIGPSAGVLVMVISVKMLEKKFDTRGVNNGILSGLVAVTSGAPLVDPEGAFVIGVISAFFYYASANLLLKLKIDDVVDAAPVHMFCGIWGLIGTGLFTTREGWALTYGAAGGDRADECCGLFYGCGFNLL 362
BLAST of mRNA_Ecto-sp13_S_contig14452.3424.1 vs. uniprot
Match: A0A6H5J7X8_9PHAE (Ammonium transporter n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7X8_9PHAE) HSP 1 Score: 236 bits (601), Expect = 8.800e-72 Identity = 115/253 (45.45%), Postives = 160/253 (63.24%), Query Frame = 1
Query: 4 IYGVIITSLIYPVVAHWVWAPSGWASSFRANEEDLLVGCGVADFSGSGVVHLTGRGLMALVAAFCVHPRGGRFDAEGKPRRLERQSPALNVLGTLILWAGWFFFNASGVASFSRQPDDAAKSMLNTAVCPSAAVVVTMLIHWMYHRSFDPFMATNGMLGGLVAITASSPLVQAEGAFVIGVVSGALVFYGSKLLLKFKIDDVVDASVVHGLCGLWGMVATGLFTTKLGYARAYAEDRADECCGVFYGCSGSLL 762
++ +ITS IYP+VAHW W+ GWAS+ A+++DLL GCG + +GSGVVH+TG G+ AL F + PR GRF+ +G + +QS L LGT ILW GW FN + SF P AA+ M T + ++ + +++ + +D A NG+L GLV++TA + + EGAFV+G++ G L + S LLLK +DDVV+A VH G+WG+VA G F +K GYA AY+EDR+ C GV YG SGS L
Sbjct: 139 LHSFLITSFIYPIVAHWAWSDGGWASARLADDDDLLFGCGAIELAGSGVVHMTG-GMAALTGIFILGPRAGRFNEDGSSNTMPQQSAVLQTLGTFILWWGWLGFNGGSLPSFVSMPAVAARVMAVTVISGASGGISSLVANKRLCGYWDTGSALNGILAGLVSVTAGAATYEPEGAFVVGLIGGMLYVFASALLLKLHLDDVVNAVPVHLFGGMWGLVAAGFFASKFGYAAAYSEDRSGRCAGVLYGGSGSSL 390
BLAST of mRNA_Ecto-sp13_S_contig14452.3424.1 vs. uniprot
Match: D7FR22_ECTSI (Ammonium transporter n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR22_ECTSI) HSP 1 Score: 234 bits (598), Expect = 2.350e-71 Identity = 128/254 (50.39%), Postives = 158/254 (62.20%), Query Frame = 1
Query: 1 LIYGVIITSLIYPVVAHWVWAPSGWASSFRANEEDLLVGCGVADFSGSGVVHLTGRGLMALVAAFCVHPRGGRFDAEGKPRRLERQSPALNVLGTLILWAGWFFFNASGVASFSRQPDDAAKSMLNTAVCPSAAVVVTMLIHWMYHRSFDPFMATNGMLGGLVAITASSPLVQAEGAFVIGVVSGALVFYGSKLLLKFKIDDVVDASVVHGLCGLWGMVATGLFTTKLGYARAYAEDRADECCGVFYGCSGSLL 762
+IY VI+TS IYPVV HW WA GWAS++R E DLL GCGV DF+GSGVVH+TG GL AL AA V PR GRF+ +G L +QS L LGTLILW GW+ FN AAK+M+ T + + V T+L+ +D A NG+L GLV +TA + EGA VIG++SG + Y SK+L+ KIDDVVDA VH CG WG+ A LF TK Y AY DRAD+C G FYG +G+ +
Sbjct: 152 IIYSVILTSFIYPVVVHWGWA-GGWASAWR--ETDLLFGCGVIDFAGSGVVHMTG-GLAALCAAIVVGPRTGRFNEDGTANTLPQQSAVLQSLGTLILWFGWYGFNGVSTLYIVGFAGVAAKTMVTTTISAAFGAVTTVLLGKFNLGHWDGGAANNGLLAGLVGVTAGCSTCEPEGAMVIGIISGFVYTYSSKMLVMLKIDDVVDAIPVHCFCGAWGVFAASLFATKDNYGMAY-YDRADKCAGAFYGGAGNAV 400
BLAST of mRNA_Ecto-sp13_S_contig14452.3424.1 vs. uniprot
Match: A0A835ZI90_9STRA (Ammonium transporter n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZI90_9STRA) HSP 1 Score: 230 bits (587), Expect = 2.570e-69 Identity = 120/254 (47.24%), Postives = 156/254 (61.42%), Query Frame = 1
Query: 1 LIYGVIITSLIYPVVAHWVWAPSGWASSFRANEEDLLVGCGVADFSGSGVVHLTGRGLMALVAAFCVHPRGGRFDAEGKPRRLERQSPALNVLGTLILWAGWFFFNASGVASFSRQPDDAAKSMLNTAVCPSAAVVVTMLIHWMYHRSFDPFMATNGMLGGLVAITASSPLVQAEGAFVIGVVSGALVFYGSKLLLKFKIDDVVDASVVHGLCGLWGMVATGLFTTKLGYARAYAEDRADECCGVFYGCSGSLL 762
LIY V +T IYP++ H W+ GW S+FR E+ LL CGV DF+GSGVVH+TG G+ ALV A V PR GRF G+ R L + S +GTL LW GW+ FN + + AAK M+N+ + + + + L+ + + DP A NG+L G VAIT S +VQ EGA +IG ++G + S LLLK +IDDVV+A+ VH CG+WGM A GL + Y RAY EDRAD CCG FYGC G+ L
Sbjct: 165 LIYAVTLTGFIYPIMVHMTWSAGGWMSAFR--EDFLLSRCGVVDFAGSGVVHMTG-GVAALVGAVMVGPRAGRFGPSGEVRALPQLSWVYQAIGTLFLWFGWYGFNGVSTLLITGKGLVAAKVMINSTLSGAIGGLSSTLVALLMNGYIDPAAANNGILSGFVAITGPSGVVQPEGALLIGFIAGLIYQGASNLLLKLRIDDVVNAAPVHLFCGMWGMFAVGLLAEEHNYGRAYYEDRADICCGAFYGCGGNQL 415
BLAST of mRNA_Ecto-sp13_S_contig14452.3424.1 vs. uniprot
Match: A0A6V1QTK2_HETAK (Ammonium transporter n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1QTK2_HETAK) HSP 1 Score: 228 bits (581), Expect = 9.680e-69 Identity = 115/252 (45.63%), Postives = 160/252 (63.49%), Query Frame = 1
Query: 1 LIYGVIITSLIYPVVAHWVWAPSGWASSFRANEEDLLVGCGVADFSGSGVVHLTGRGLMALVAAFCVHPRGGRFDAEGKPRRLERQSPALNVLGTLILWAGWFFFNASGVASFSRQPDDAAKSMLNTAVCPSAAVVVTMLIHWMYHRSFDPFMATNGMLGGLVAITASSPLVQAEGAFVIGVVSGALVFYGSKLLLKFKIDDVVDASVVHGLCGLWGMVATGLFTTKLGYARAYAEDRADECCGVFYGCSGS 756
L+Y + S +YP V HW W +GWAS++R EEDLL GCGV DF+GSGVVH TG G++AL A + PR GRF G+ + + SP LGTLILW GW+ FN + AA++M+ + + A + ++L+ ++ DP A NG+LGGLV+ITAS +V EGAFVIG++ G + ++ + LLL+ +IDDVV+AS VH CG+WG++A+GLF ++ Y AY R +C G FYG GS
Sbjct: 155 LVYAFCLVSFVYPCVVHWGWNANGWASAWR--EEDLLFGCGVLDFAGSGVVHTTG-GVVALWGAKILGPRTGRF-INGQKQEFKEVSPIYQTLGTLILWFGWYGFNGASTLYIGGYSAPAARAMVTSTISAGAGCISSVLLAKLHTGIIDPGAANNGILGGLVSITASCSVVDPEGAFVIGLIGGVIYYFSALLLLRLQIDDVVNASPVHMFCGVWGVLASGLFASEAPYGAAYYSARQSKCAGAFYGGDGS 402
BLAST of mRNA_Ecto-sp13_S_contig14452.3424.1 vs. uniprot
Match: A0A7S4DGA7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DGA7_HETAK) HSP 1 Score: 223 bits (569), Expect = 9.280e-68 Identity = 114/253 (45.06%), Postives = 156/253 (61.66%), Query Frame = 1
Query: 1 LIYGVIITSLIYPVVAHWVWAPSGWASSFRANEEDLLVGCGVADFSGSGVVHLTGRGLMALVAAFCVHPRGGRFDAEGKPRRLERQSPALNVLGTLILWAGWFFFNASGVASFSRQPDD--AAKSMLNTAVCPSAAVVVTMLIHWMYHRSFDPFMATNGMLGGLVAITASSPLVQAEGAFVIGVVSGALVFYGSKLLLKFKIDDVVDASVVHGLCGLWGMVATGLFTTKLGYARAYAEDRADECCGVFYGCSG 753
+IY + +T IYP++ HW W+ GWAS++R E+ LL+GCG+ DF+GSGV+H TG G+ AL+ A+ + PR GRF A G+ + + S LGTL LW N GV+S A++M+NT + A + +++ H DP A NG+LGGLVAITA EGAFV G+++GA+ S L+LK +IDDVVDA+ VH CG WG +A GLF + Y+ A+ DRAD+CCG FYGC G
Sbjct: 67 IIYSICLTGFIYPLIVHWGWSAGGWASAWR--EDKLLLGCGIIDFAGSGVIHTTG-GVAALLGAYMIGPRKGRFSATGEVCEIPQLSWVYQTLGTLFLWFXXXXXN--GVSSMYAAGGSLAGARAMVNTTISGGAGCISGLIVARFVHGYIDPASANNGLLGGLVAITAGCGTSNPEGAFVTGLIAGAIYVGASVLMLKLRIDDVVDAAPVHLFCGSWGFLAAGLFAAEDNYSVAFYSDRADKCCGAFYGCGG 314
BLAST of mRNA_Ecto-sp13_S_contig14452.3424.1 vs. uniprot
Match: D7G243_ECTSI (Ammonium transporter n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G243_ECTSI) HSP 1 Score: 224 bits (571), Expect = 2.850e-67 Identity = 121/254 (47.64%), Postives = 154/254 (60.63%), Query Frame = 1
Query: 1 LIYGVIITSLIYPVVAHWVWAPSGWASSFRANEEDLLVGCGVADFSGSGVVHLTGRGLMALVAAFCVHPRGGRFDAEGKPRRLERQSPALNVLGTLILWAGWFFFNASGVASFSRQPDDAAKSMLNTAVCPSAAVVVTMLIHWMYHRSFDPFMATNGMLGGLVAITASSPLVQAEGAFVIGVVSGALVFYGSKLLLKFKIDDVVDASVVHGLCGLWGMVATGLFTTKLGYARAYAEDRADECCGVFYGCSGSLL 762
+IY VI+TS IYPVV HW W GWAS++ +EDLL CGV DF+GSGVVH+TG GL AL AA V PR GRF+ +G L +QS L LGTLILW G + + AAK+M+ T + + V T+L+ + +D A NG+L GLV +TA + EGA VIG++SG + Y SK+L+ KIDDVVDA VH CG WG+ A LF TK Y+ AY DR D+C G FYG G+ +
Sbjct: 156 IIYSVILTSFIYPVVVHWGWG-GGWASAWV--DEDLLFDCGVIDFAGSGVVHMTG-GLAALAAAIVVGPRTGRFNEDGTANTLPQQSAVLQTLGTLILWFGXXXXXXVSTLAINGLAGVAAKTMVTTTISAAFGAVTTVLLGKLNLGYWDAGAANNGLLAGLVGVTAGCSTCEPEGAMVIGIISGFVYTYSSKMLVMLKIDDVVDAIPVHCFCGAWGVFAASLFATKDNYSAAYYGDRVDKCAGAFYGGDGNAV 405 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14452.3424.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig14452.3424.1 >prot_Ecto-sp13_S_contig14452.3424.1 ID=prot_Ecto-sp13_S_contig14452.3424.1|Name=mRNA_Ecto-sp13_S_contig14452.3424.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=254bp LIYGVIITSLIYPVVAHWVWAPSGWASSFRANEEDLLVGCGVADFSGSGVback to top mRNA from alignment at Ecto-sp13_S_contig14452:35..3897+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig14452.3424.1 ID=mRNA_Ecto-sp13_S_contig14452.3424.1|Name=mRNA_Ecto-sp13_S_contig14452.3424.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3863bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14452:35..3897+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig14452:35..3897+ >mRNA_Ecto-sp13_S_contig14452.3424.1 ID=mRNA_Ecto-sp13_S_contig14452.3424.1|Name=mRNA_Ecto-sp13_S_contig14452.3424.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=762bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14452:35..3897+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |