mRNA_Ecto-sp13_S_contig14452.3424.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig14452.3424.1
Unique NamemRNA_Ecto-sp13_S_contig14452.3424.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig14452.3424.1 vs. uniprot
Match: D7G1Q4_ECTSI (Ammonium transporter n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1Q4_ECTSI)

HSP 1 Score: 497 bits (1279), Expect = 1.530e-174
Identity = 248/254 (97.64%), Postives = 250/254 (98.43%), Query Frame = 1
Query:    1 LIYGVIITSLIYPVVAHWVWAPSGWASSFRANEEDLLVGCGVADFSGSGVVHLTGRGLMALVAAFCVHPRGGRFDAEGKPRRLERQSPALNVLGTLILWAGWFFFNASGVASFSRQPDDAAKSMLNTAVCPSAAVVVTMLIHWMYHRSFDPFMATNGMLGGLVAITASSPLVQAEGAFVIGVVSGALVFYGSKLLLKFKIDDVVDASVVHGLCGLWGMVATGLFTTKLGYARAYAEDRADECCGVFYGCSGSLL 762
            LIYGVIITSLIYPVVAHWVWA SGWASSFRA + DLLVGCGVADFSGSGVVHLTG GLMALVAAFCVHPRGGRFDAEGKPRRLERQSPALNVLGTLILWAGWFFFNASGVASFSRQPDDAAKSMLNTAVCPSAAVVVTMLIHWMYHRSFDPFMATNGMLGGLVAITASSPLVQAEGAFVIGVVSGALVFYGSKLLLKFKIDDVVDASVVHGLCGLWGMVATGLFTT+LGYARAYAEDRADECCGVFYGCSGSLL
Sbjct:  106 LIYGVIITSLIYPVVAHWVWARSGWASSFRA-DGDLLVGCGVADFSGSGVVHLTG-GLMALVAAFCVHPRGGRFDAEGKPRRLERQSPALNVLGTLILWAGWFFFNASGVASFSRQPDDAAKSMLNTAVCPSAAVVVTMLIHWMYHRSFDPFMATNGMLGGLVAITASSPLVQAEGAFVIGVVSGALVFYGSKLLLKFKIDDVVDASVVHGLCGLWGMVATGLFTTRLGYARAYAEDRADECCGVFYGCSGSLL 357          
BLAST of mRNA_Ecto-sp13_S_contig14452.3424.1 vs. uniprot
Match: A0A6H5JVJ2_9PHAE (Ammonium transporter n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVJ2_9PHAE)

HSP 1 Score: 269 bits (687), Expect = 1.600e-82
Identity = 140/258 (54.26%), Postives = 174/258 (67.44%), Query Frame = 1
Query:    7 YGVIITSLIYPVVAHWVWAPSGWASSFRANEED--LLVGCGVADFSGSGVVHLTGRGLMALVAAFCVHPRGGRFDAEGKPRRLERQSPALNVLGTLILWAGWFFFNASGVASFSR-QPDDAAKSMLNTAVCPSAAVVVTMLIHWMYHRSFDPFMATNGMLGGLVAITASSPLVQAEGAFVIGVVSGALVFYGSKLLLKFKIDDVVDASVVHGLCGLWGMVATGLFTTKLGYARAYAE---DRADECCGVFYGCSGSLL 762
            Y + +TS IYPVV HW W P GWAS +R  +E   LL GCG ADF+GSGVVH+ G G+ ALVAA  V PR  RF   G   RL +QSPAL  LGTLILW GW+ FNA    + S  +   AA+++++T + PSA V+V ++   M  + FD     NG+L GLVA+T+ +PLV  EGAFV+GVVS  L +  + LLLK KIDDVVDA+ VH  CG+WGM+ TGLFTT+ G+A  Y     DRADECCGVFYGC  +LL
Sbjct:  158 YAIALTSFIYPVVVHWAWHPDGWASPYRTADEGAPLLSGCGAADFAGSGVVHMVG-GIAALVAAIAVKPRKSRF-RHGHACRLPQQSPALQTLGTLILWVGWYAFNAGSTITISGGRSVVAARAVVSTTIGPSAGVLVMVIAVKMLEKKFDTRGVNNGILSGLVAVTSGAPLVDPEGAFVMGVVSAFLYYASANLLLKLKIDDVVDAAPVHMFCGMWGMIGTGLFTTREGWALTYGAAGGDRADECCGVFYGCGFNLL 413          
BLAST of mRNA_Ecto-sp13_S_contig14452.3424.1 vs. uniprot
Match: D7G265_ECTSI (Ammonium transporter n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G265_ECTSI)

HSP 1 Score: 249 bits (635), Expect = 7.790e-77
Identity = 121/253 (47.83%), Postives = 170/253 (67.19%), Query Frame = 1
Query:    4 IYGVIITSLIYPVVAHWVWAPSGWASSFRANEEDLLVGCGVADFSGSGVVHLTGRGLMALVAAFCVHPRGGRFDAEGKPRRLERQSPALNVLGTLILWAGWFFFNASGVASFSRQPDDAAKSMLNTAVCPSAAVVVTMLIHWMYHRSFDPFMATNGMLGGLVAITASSPLVQAEGAFVIGVVSGALVFYGSKLLLKFKIDDVVDASVVHGLCGLWGMVATGLFTTKLGYARAYAEDRADECCGVFYGCSGSLL 762
            ++  ++TS IYP+VAHW W+  GWAS+  A+++DLL GCGV DF+GSGVVH+TG G+ AL+  F + PR GRF+ +G    + +QS  L  LGT +LW GW  FNA  V+SF   P  AAK M  T +  ++  + ++L++ +    +D   A NG+L GLV+ITA S   + EGAFV+GV+ G L F+ S LLL+  +DDVV+A+ VH   G+WG+V+ GLF++K  YA AY+EDR+D C G+ YG SG  L
Sbjct:  139 LHSFLLTSFIYPIVAHWAWSDGGWASARLADDDDLLFGCGVTDFAGSGVVHMTG-GMAALMGIFILGPRAGRFNEDGTSNTMPQQSAVLQTLGTFMLWWGWLGFNAGSVSSFVATPAVAAKVMGVTVIGGASGGITSLLVNKLQCGYWDTGSALNGILTGLVSITAGSGTYEPEGAFVVGVLGGVLYFFASNLLLRNHLDDVVNAAPVHLFGGMWGLVSAGLFSSKFAYAMAYSEDRSDTCAGILYGGSGGTL 390          
BLAST of mRNA_Ecto-sp13_S_contig14452.3424.1 vs. uniprot
Match: D8LEG5_ECTSI (Ammonium transporter n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEG5_ECTSI)

HSP 1 Score: 251 bits (640), Expect = 6.300e-76
Identity = 130/246 (52.85%), Postives = 165/246 (67.07%), Query Frame = 1
Query:   43 VAHWVWAPSGWASSFRANEED--LLVGCGVADFSGSGVVHLTGRGLMALVAAFCVHPRGGRFDAEGKPRRLERQSPALNVLGTLILWAGWFFFNASGVASFSR-QPDDAAKSMLNTAVCPSAAVVVTMLIHWMYHRSFDPFMATNGMLGGLVAITASSPLVQAEGAFVIGVVSGALVFYGSKLLLKFKIDDVVDASVVHGLCGLWGMVATGLFTTKLGYARAYAE---DRADECCGVFYGCSGSLL 762
            V HW W P GWAS +R  +E   LL GCG ADF+GSGVVH+ G G+ ALVAA  V PR  RF   G+  RL +QSPAL  LGTLILW GW+ FNA    + S  +   AA+++++T + PSA V+V ++   M  + FD     NG+L GLVA+T+ +PLV  EGAFVIGV+S    +  + LLLK KIDDVVDA+ VH  CG+WG++ TGLFTT+ G+A  Y     DRADECCG+FYGC  +LL
Sbjct:  119 VVHWAWHPDGWASPYRTADEGAPLLSGCGAADFAGSGVVHMVG-GVAALVAAIAVKPRKSRF-RHGRACRLPQQSPALQTLGTLILWVGWYAFNAGSTITISGGRSVVAARAVVSTTIGPSAGVLVMVISVKMLEKKFDTRGVNNGILSGLVAVTSGAPLVDPEGAFVIGVISAFFYYASANLLLKLKIDDVVDAAPVHMFCGIWGLIGTGLFTTREGWALTYGAAGGDRADECCGLFYGCGFNLL 362          
BLAST of mRNA_Ecto-sp13_S_contig14452.3424.1 vs. uniprot
Match: A0A6H5J7X8_9PHAE (Ammonium transporter n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7X8_9PHAE)

HSP 1 Score: 236 bits (601), Expect = 8.800e-72
Identity = 115/253 (45.45%), Postives = 160/253 (63.24%), Query Frame = 1
Query:    4 IYGVIITSLIYPVVAHWVWAPSGWASSFRANEEDLLVGCGVADFSGSGVVHLTGRGLMALVAAFCVHPRGGRFDAEGKPRRLERQSPALNVLGTLILWAGWFFFNASGVASFSRQPDDAAKSMLNTAVCPSAAVVVTMLIHWMYHRSFDPFMATNGMLGGLVAITASSPLVQAEGAFVIGVVSGALVFYGSKLLLKFKIDDVVDASVVHGLCGLWGMVATGLFTTKLGYARAYAEDRADECCGVFYGCSGSLL 762
            ++  +ITS IYP+VAHW W+  GWAS+  A+++DLL GCG  + +GSGVVH+TG G+ AL   F + PR GRF+ +G    + +QS  L  LGT ILW GW  FN   + SF   P  AA+ M  T +  ++  + +++ +      +D   A NG+L GLV++TA +   + EGAFV+G++ G L  + S LLLK  +DDVV+A  VH   G+WG+VA G F +K GYA AY+EDR+  C GV YG SGS L
Sbjct:  139 LHSFLITSFIYPIVAHWAWSDGGWASARLADDDDLLFGCGAIELAGSGVVHMTG-GMAALTGIFILGPRAGRFNEDGSSNTMPQQSAVLQTLGTFILWWGWLGFNGGSLPSFVSMPAVAARVMAVTVISGASGGISSLVANKRLCGYWDTGSALNGILAGLVSVTAGAATYEPEGAFVVGLIGGMLYVFASALLLKLHLDDVVNAVPVHLFGGMWGLVAAGFFASKFGYAAAYSEDRSGRCAGVLYGGSGSSL 390          
BLAST of mRNA_Ecto-sp13_S_contig14452.3424.1 vs. uniprot
Match: D7FR22_ECTSI (Ammonium transporter n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR22_ECTSI)

HSP 1 Score: 234 bits (598), Expect = 2.350e-71
Identity = 128/254 (50.39%), Postives = 158/254 (62.20%), Query Frame = 1
Query:    1 LIYGVIITSLIYPVVAHWVWAPSGWASSFRANEEDLLVGCGVADFSGSGVVHLTGRGLMALVAAFCVHPRGGRFDAEGKPRRLERQSPALNVLGTLILWAGWFFFNASGVASFSRQPDDAAKSMLNTAVCPSAAVVVTMLIHWMYHRSFDPFMATNGMLGGLVAITASSPLVQAEGAFVIGVVSGALVFYGSKLLLKFKIDDVVDASVVHGLCGLWGMVATGLFTTKLGYARAYAEDRADECCGVFYGCSGSLL 762
            +IY VI+TS IYPVV HW WA  GWAS++R  E DLL GCGV DF+GSGVVH+TG GL AL AA  V PR GRF+ +G    L +QS  L  LGTLILW GW+ FN             AAK+M+ T +  +   V T+L+       +D   A NG+L GLV +TA     + EGA VIG++SG +  Y SK+L+  KIDDVVDA  VH  CG WG+ A  LF TK  Y  AY  DRAD+C G FYG +G+ +
Sbjct:  152 IIYSVILTSFIYPVVVHWGWA-GGWASAWR--ETDLLFGCGVIDFAGSGVVHMTG-GLAALCAAIVVGPRTGRFNEDGTANTLPQQSAVLQSLGTLILWFGWYGFNGVSTLYIVGFAGVAAKTMVTTTISAAFGAVTTVLLGKFNLGHWDGGAANNGLLAGLVGVTAGCSTCEPEGAMVIGIISGFVYTYSSKMLVMLKIDDVVDAIPVHCFCGAWGVFAASLFATKDNYGMAY-YDRADKCAGAFYGGAGNAV 400          
BLAST of mRNA_Ecto-sp13_S_contig14452.3424.1 vs. uniprot
Match: A0A835ZI90_9STRA (Ammonium transporter n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZI90_9STRA)

HSP 1 Score: 230 bits (587), Expect = 2.570e-69
Identity = 120/254 (47.24%), Postives = 156/254 (61.42%), Query Frame = 1
Query:    1 LIYGVIITSLIYPVVAHWVWAPSGWASSFRANEEDLLVGCGVADFSGSGVVHLTGRGLMALVAAFCVHPRGGRFDAEGKPRRLERQSPALNVLGTLILWAGWFFFNASGVASFSRQPDDAAKSMLNTAVCPSAAVVVTMLIHWMYHRSFDPFMATNGMLGGLVAITASSPLVQAEGAFVIGVVSGALVFYGSKLLLKFKIDDVVDASVVHGLCGLWGMVATGLFTTKLGYARAYAEDRADECCGVFYGCSGSLL 762
            LIY V +T  IYP++ H  W+  GW S+FR  E+ LL  CGV DF+GSGVVH+TG G+ ALV A  V PR GRF   G+ R L + S     +GTL LW GW+ FN       + +   AAK M+N+ +  +   + + L+  + +   DP  A NG+L G VAIT  S +VQ EGA +IG ++G +    S LLLK +IDDVV+A+ VH  CG+WGM A GL   +  Y RAY EDRAD CCG FYGC G+ L
Sbjct:  165 LIYAVTLTGFIYPIMVHMTWSAGGWMSAFR--EDFLLSRCGVVDFAGSGVVHMTG-GVAALVGAVMVGPRAGRFGPSGEVRALPQLSWVYQAIGTLFLWFGWYGFNGVSTLLITGKGLVAAKVMINSTLSGAIGGLSSTLVALLMNGYIDPAAANNGILSGFVAITGPSGVVQPEGALLIGFIAGLIYQGASNLLLKLRIDDVVNAAPVHLFCGMWGMFAVGLLAEEHNYGRAYYEDRADICCGAFYGCGGNQL 415          
BLAST of mRNA_Ecto-sp13_S_contig14452.3424.1 vs. uniprot
Match: A0A6V1QTK2_HETAK (Ammonium transporter n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1QTK2_HETAK)

HSP 1 Score: 228 bits (581), Expect = 9.680e-69
Identity = 115/252 (45.63%), Postives = 160/252 (63.49%), Query Frame = 1
Query:    1 LIYGVIITSLIYPVVAHWVWAPSGWASSFRANEEDLLVGCGVADFSGSGVVHLTGRGLMALVAAFCVHPRGGRFDAEGKPRRLERQSPALNVLGTLILWAGWFFFNASGVASFSRQPDDAAKSMLNTAVCPSAAVVVTMLIHWMYHRSFDPFMATNGMLGGLVAITASSPLVQAEGAFVIGVVSGALVFYGSKLLLKFKIDDVVDASVVHGLCGLWGMVATGLFTTKLGYARAYAEDRADECCGVFYGCSGS 756
            L+Y   + S +YP V HW W  +GWAS++R  EEDLL GCGV DF+GSGVVH TG G++AL  A  + PR GRF   G+ +  +  SP    LGTLILW GW+ FN +           AA++M+ + +   A  + ++L+  ++    DP  A NG+LGGLV+ITAS  +V  EGAFVIG++ G + ++ + LLL+ +IDDVV+AS VH  CG+WG++A+GLF ++  Y  AY   R  +C G FYG  GS
Sbjct:  155 LVYAFCLVSFVYPCVVHWGWNANGWASAWR--EEDLLFGCGVLDFAGSGVVHTTG-GVVALWGAKILGPRTGRF-INGQKQEFKEVSPIYQTLGTLILWFGWYGFNGASTLYIGGYSAPAARAMVTSTISAGAGCISSVLLAKLHTGIIDPGAANNGILGGLVSITASCSVVDPEGAFVIGLIGGVIYYFSALLLLRLQIDDVVNASPVHMFCGVWGVLASGLFASEAPYGAAYYSARQSKCAGAFYGGDGS 402          
BLAST of mRNA_Ecto-sp13_S_contig14452.3424.1 vs. uniprot
Match: A0A7S4DGA7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DGA7_HETAK)

HSP 1 Score: 223 bits (569), Expect = 9.280e-68
Identity = 114/253 (45.06%), Postives = 156/253 (61.66%), Query Frame = 1
Query:    1 LIYGVIITSLIYPVVAHWVWAPSGWASSFRANEEDLLVGCGVADFSGSGVVHLTGRGLMALVAAFCVHPRGGRFDAEGKPRRLERQSPALNVLGTLILWAGWFFFNASGVASFSRQPDD--AAKSMLNTAVCPSAAVVVTMLIHWMYHRSFDPFMATNGMLGGLVAITASSPLVQAEGAFVIGVVSGALVFYGSKLLLKFKIDDVVDASVVHGLCGLWGMVATGLFTTKLGYARAYAEDRADECCGVFYGCSG 753
            +IY + +T  IYP++ HW W+  GWAS++R  E+ LL+GCG+ DF+GSGV+H TG G+ AL+ A+ + PR GRF A G+   + + S     LGTL LW      N  GV+S          A++M+NT +   A  +  +++    H   DP  A NG+LGGLVAITA       EGAFV G+++GA+    S L+LK +IDDVVDA+ VH  CG WG +A GLF  +  Y+ A+  DRAD+CCG FYGC G
Sbjct:   67 IIYSICLTGFIYPLIVHWGWSAGGWASAWR--EDKLLLGCGIIDFAGSGVIHTTG-GVAALLGAYMIGPRKGRFSATGEVCEIPQLSWVYQTLGTLFLWFXXXXXN--GVSSMYAAGGSLAGARAMVNTTISGGAGCISGLIVARFVHGYIDPASANNGLLGGLVAITAGCGTSNPEGAFVTGLIAGAIYVGASVLMLKLRIDDVVDAAPVHLFCGSWGFLAAGLFAAEDNYSVAFYSDRADKCCGAFYGCGG 314          
BLAST of mRNA_Ecto-sp13_S_contig14452.3424.1 vs. uniprot
Match: D7G243_ECTSI (Ammonium transporter n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G243_ECTSI)

HSP 1 Score: 224 bits (571), Expect = 2.850e-67
Identity = 121/254 (47.64%), Postives = 154/254 (60.63%), Query Frame = 1
Query:    1 LIYGVIITSLIYPVVAHWVWAPSGWASSFRANEEDLLVGCGVADFSGSGVVHLTGRGLMALVAAFCVHPRGGRFDAEGKPRRLERQSPALNVLGTLILWAGWFFFNASGVASFSRQPDDAAKSMLNTAVCPSAAVVVTMLIHWMYHRSFDPFMATNGMLGGLVAITASSPLVQAEGAFVIGVVSGALVFYGSKLLLKFKIDDVVDASVVHGLCGLWGMVATGLFTTKLGYARAYAEDRADECCGVFYGCSGSLL 762
            +IY VI+TS IYPVV HW W   GWAS++   +EDLL  CGV DF+GSGVVH+TG GL AL AA  V PR GRF+ +G    L +QS  L  LGTLILW G          + +     AAK+M+ T +  +   V T+L+  +    +D   A NG+L GLV +TA     + EGA VIG++SG +  Y SK+L+  KIDDVVDA  VH  CG WG+ A  LF TK  Y+ AY  DR D+C G FYG  G+ +
Sbjct:  156 IIYSVILTSFIYPVVVHWGWG-GGWASAWV--DEDLLFDCGVIDFAGSGVVHMTG-GLAALAAAIVVGPRTGRFNEDGTANTLPQQSAVLQTLGTLILWFGXXXXXXVSTLAINGLAGVAAKTMVTTTISAAFGAVTTVLLGKLNLGYWDAGAANNGLLAGLVGVTAGCSTCEPEGAMVIGIISGFVYTYSSKMLVMLKIDDVVDAIPVHCFCGAWGVFAASLFATKDNYSAAYYGDRVDKCAGAFYGGDGNAV 405          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14452.3424.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G1Q4_ECTSI1.530e-17497.64Ammonium transporter n=2 Tax=Ectocarpus TaxID=2879... [more]
A0A6H5JVJ2_9PHAE1.600e-8254.26Ammonium transporter n=1 Tax=Ectocarpus sp. CCAP 1... [more]
D7G265_ECTSI7.790e-7747.83Ammonium transporter n=2 Tax=Ectocarpus TaxID=2879... [more]
D8LEG5_ECTSI6.300e-7652.85Ammonium transporter n=1 Tax=Ectocarpus siliculosu... [more]
A0A6H5J7X8_9PHAE8.800e-7245.45Ammonium transporter n=1 Tax=Ectocarpus sp. CCAP 1... [more]
D7FR22_ECTSI2.350e-7150.39Ammonium transporter n=1 Tax=Ectocarpus siliculosu... [more]
A0A835ZI90_9STRA2.570e-6947.24Ammonium transporter n=1 Tax=Tribonema minus TaxID... [more]
A0A6V1QTK2_HETAK9.680e-6945.63Ammonium transporter n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S4DGA7_HETAK9.280e-6845.06Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
D7G243_ECTSI2.850e-6747.64Ammonium transporter n=2 Tax=Ectocarpus TaxID=2879... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig14452contigEcto-sp13_S_contig14452:35..3897 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score500.4
Seed ortholog evalue5.1e-139
Seed eggNOG ortholog2880.D7G1Q4
Preferred nameamt-1
Model size762
KEGG koko:K03320
KEGG TC1.A.11
Hectar predicted targeting categorysignal peptide
Exons6
EggNOG free text desc.ammonium transmembrane transporter activity
EggNOG OGsCOG0004@1,KOG0682@2759
Ec32 ortholog descriptionAmmonium transporter AmtB-like domain
Ec32 orthologEc-11_000020.1
Cds size762
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko02000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig14452.3424.1prot_Ecto-sp13_S_contig14452.3424.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig14452 35..3897 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462771.3086064-CDS-Ecto-sp13_S_contig14452:34..2001681462771.3086064-CDS-Ecto-sp13_S_contig14452:34..200Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14452 35..200 +
1681462771.3187816-CDS-Ecto-sp13_S_contig14452:986..11771681462771.3187816-CDS-Ecto-sp13_S_contig14452:986..1177Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14452 987..1177 +
1681462771.3266928-CDS-Ecto-sp13_S_contig14452:1668..17541681462771.3266928-CDS-Ecto-sp13_S_contig14452:1668..1754Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14452 1669..1754 +
1681462771.3362648-CDS-Ecto-sp13_S_contig14452:2513..26671681462771.3362648-CDS-Ecto-sp13_S_contig14452:2513..2667Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14452 2514..2667 +
1681462771.3442256-CDS-Ecto-sp13_S_contig14452:3094..32051681462771.3442256-CDS-Ecto-sp13_S_contig14452:3094..3205Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14452 3095..3205 +
1681462771.352285-CDS-Ecto-sp13_S_contig14452:3843..38971681462771.352285-CDS-Ecto-sp13_S_contig14452:3843..3897Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14452 3844..3897 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig14452.3424.1

>prot_Ecto-sp13_S_contig14452.3424.1 ID=prot_Ecto-sp13_S_contig14452.3424.1|Name=mRNA_Ecto-sp13_S_contig14452.3424.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=254bp
LIYGVIITSLIYPVVAHWVWAPSGWASSFRANEEDLLVGCGVADFSGSGV
VHLTGRGLMALVAAFCVHPRGGRFDAEGKPRRLERQSPALNVLGTLILWA
GWFFFNASGVASFSRQPDDAAKSMLNTAVCPSAAVVVTMLIHWMYHRSFD
PFMATNGMLGGLVAITASSPLVQAEGAFVIGVVSGALVFYGSKLLLKFKI
DDVVDASVVHGLCGLWGMVATGLFTTKLGYARAYAEDRADECCGVFYGCS
GSLL
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mRNA from alignment at Ecto-sp13_S_contig14452:35..3897+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig14452.3424.1 ID=mRNA_Ecto-sp13_S_contig14452.3424.1|Name=mRNA_Ecto-sp13_S_contig14452.3424.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3863bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14452:35..3897+ (Ectocarpus species13 EcNAP12_S_4_19m)
TTGATATACGGAGTCATCATCACTTCCTTGATATACCCCGTCGTGGCCCA CTGGGTGTGGGCCCCAAGCGGCTGGGCGAGCTCGTTTAGGGCCAACGAAG AGGATCTGCTGGTTGGCTGCGGCGTGGCTGACTTCTCAGGGTCTGGGGTA GTGCACCTGACAGGTAGTAAGATTAGTCTCTCTCTCGGCTTTACCGCTAG CAATGCGATCCTGTTCAATAACGGCCTGCCCACTCTGGGTGGTACCATGT TGTTTTCTTGCCGCCCATGGCATGGGTAGTAACGACTCGTAGCCCGTTTG CGGGCGTGCGAAACCTGTACCGGTGTTGCGGGATGCATGGCCGCCGACCC TTCGGCTTTCGGCTGACGAAGGGCTGTATCGGAAAGGTTGTATACATTGT GCGAACAGTTGTTTCCGCACTTGCACTTGTTGGCATTGTCCCCTAACCAT TTCGTATGTCACCCTCGGGGTGCAACTAGTAACAATGACTGGCAGGAGCG TCGTCGAGGTTCGTTGGAATGGTCCAATCCTTTTGCGCTGTTTATTGTTC CGGCCGCAACCGAGGTCGCCCACAGCAGCATTTGCTACATTTTTGACGTT GCGGGTTGCTTTGCCTGGCCGAAACACTAGGACAATGCCTGCCCGATCAT TTTTCGAGCCTGTCGTAGGCACAAGCAGGCTTGCCGTCGAGACTTGAAAG CTACGTTGATCCTGATCCCCGTCTGCCCTTGAGAAATAGAGATAGATACA TACCAGTTTCCTTCATCATTCTGCAACATGCGGGACGGGTGTCAACTGGT ACAGTAGCTCTGGTACACCAAGTCCCACCGCCGCATTGTGGTTAGCGGCA GCGTCACTTTGTTCCAACATGCCCCTAAACCCACCTCCTTCATTCCTTCC TGTTTGCAACCCCGCTCGCCCTTGTTACCACCTGCCCTTGTCTTTGTTGC AGGGGGGTTGATGGCGCTAGTGGCGGCGTTCTGCGTACACCCCCGGGGAG GCAGGTTTGACGCGGAGGGTAAACCCCGTCGCTTGGAGAGACAAAGTCCT GCTCTGAACGTGCTGGGGACGCTGATACTGTGGGCGGGCTGGTTCTTCTT CAACGCCTCTGGGGTGGCGTCTTTCAGCAGGCAGCCTGACGACGTGAGGA GCCTTTGTTAGGTCCCACGGCAGACGTTGATAGTGTTCCCGTAACTACCC AGAAGTCGATGGCGTACTGATCGGGCACGCATACCACGCTATGCAGGAAG ACTTACCGACAGATGTTGTCACGCTCCTGTTTCTACTCAGAGGTCCATGG CATACGGAGATTGTACCACCTTGTGCAGGAAAGCTTATCGACTCTGCCGC CGTCGCTAGACAAGATCAGTTTTGGGTCCAGGTGTTTTTTGTGGATGTGG TGTGTGGTGTGTGTGTCGCTGGGTAGTCTGGTGCCGGCGAGTCCGCCCGA AAGTACTCGATTGTCATGGATGTCCTGTTGTTCCAACGGTACAACAGAGG GCCGCCCGCTGTCGTTCCTTCCGCCTTACTGCTTGTCCTTCACACCTACC ACACTACAAAGTGGCTGTCTCTGTTCTGCCATTTCTCGCATTATATATAT TTTTTCCGTGCCCGTGCGCTAACTACTTGTGCAGGCCGCGAAATCTATGC TGAACACGGCGGTATGCCCTTCGGCAGCCGTGGTTGTGACGATGCTCATT CACTGGATGTACCACCGCAGGTTGGGGGCCATATCTACCTAGACTATCGA TGTAGCGACTGTTGACCCGACTTCCGTGTGCCCTGCGTCGTTTGCTACTG TGATAGCTGGCTTGACACTCACAAGCGATGTAGTTGTCGCAGGTAGTGCC CTCGACCGATGCCATGCCCATACCATGTTCACGTGGATCACGGCAGTAGC CTCAAGACTATCCACAGTAGGGAACGCATGCTGTGACCGCGCCCCACGTA GGGGGCTAGCTTCAGTGTGGCGGAAGCACGAGTGTGCTGAATTCCATGCC CGGCGCCCTCTTCCGGCAACGAGTCTGTTTGCCTCGTGTTGGCCTTTTCT GTGTATGTTAGTTGCTAGTGCTGACACCAGGCGGTAGGCTGGTTGACTCC GAGATTGACTATTATTTCTTATCCTTTGATGCGGGTTTTTCGATGGCAAT CCCCATTCCTCCCTACCTCGGTGACACACGGGGTGGCCGTGTCCATGCCT AGCTCCTAGCTGACGTTAGGGGGGTGTCATATGACGTGTAGCTTGTAACG TTTTGAAGCCTACCTGGTGCCCTGCATTCGTCTTTTAGCGACGTCATGCT TCCCCCCACGACGTCTGCTGTGACATGTTGGTCGAAGAACGGCAAAACGC TATCCTAGTTGCTGGTAGCAGGGTTGGTGGCGATGCTGCAAAGTGCGACG TTACACCTCACGGTGCGCCTCTGCTGACGCAGTGCCCCCGACGTACAAAA TACACTTGGCCGGCGTTGAACTGTTTCAGCTTCGACCCGTTCATGGCAAC GAATGGCATGCTGGGAGGCCTCGTCGCGATCACCGCCTCATCCCCCTTGG TGCAAGCGGAGGGGGCGTTTGTCATCGGTGTTGTGTCCGGAGCGCTGGTG TTTTACGGCAGCAAGCTCTTGCTAAAGTTCAAGGTAAGGACTTGGCCTTC AGCAATCTCCAACTGCCTGCCATTGTTTGGCCTTTTCTGCTAGTTCACGG CGTCCATATCCACTCCATGCATCATCTTTTGTTGACGGTGTGGCTTGTTG GTGTACGTTCTATGGTTGACTAAGGAATCGCTTTCTATGCTCTTCAATTG TGCTTTCATTCATGCTCATGAAAAAAGTTGAAATCAGCGAAGGATCCCTC CCTCTCACTTGCAAAACAAGCACGGGACTGTGAGGCAGGCGGGGAGCGCG AACGCACGAGCGGTTTATTTAGATCGCACGGCACGTATCTATGCATACAG TAGAGGGTCATCATCAACCAGTTCCAGCGTTTGAACTGGCAGTGGCCGAA CACAGACAAAGTGATCGGTCCTTCCCGGTTGTAACGTCTCGGCTGTTTTG CTGTGGTCAGATCGATGACGTGGTGGACGCGAGCGTGGTGCACGGGCTGT GCGGACTGTGGGGCATGGTAGCGACGGGCCTGTTTACCACCAAGCTAGGC TACGCAAGAGCCTACGCCGAGGTACCCACGCACAACCAGCAAGGGCTATG CTGCACCTTTTCTTATCGCCGGAACGGGATGTTGGCTGCTTTTTGAGAGG GGGCGAGACGGGGCGAGGCTTGTTGGATGCGGTGGTTGTTGTATGACCGG GCAGACGTGTTTTTTCTGTTTTCTCTTGCGCCTGAAAGCGGTGCCCAGTC TGACGCGACGCAGACACGACGGTACGTAAGGTTAGACACTTTCAAATGTT AGCCTAAGCATCGGCCCGCCATATTCGCGGCGACTTTCAGTTTGCCTGGT GGCAGTTGGTGCTTTTATCGGTGATGTGCCGTCTGCGGTACTCGGTTTTA ATTCTCACTCAAGGCGAACATCAGATGCATATGACGAGTGAACAAAAGGA AGGTCCGCGAGACTACCCCTGAAAACCTGAAGTTTACATATTTACTGCGC GACATGTTCGATCGAAGAGCGCTTGCTCGCCGGCTTGTTGTTGGAGACCT ACCAGCCTCTGGTTGATCTTTGGCGGTCCTCTACCCTCCAACCTTAGTCC TCAACCCCCTCGTGTTGTGCCTGTACTGCTGTACCTGCGTTGCTGCCGAT GGTGACCGGCGGTCCGTCTCTACCATCCCTGCGCACTTCGGCGTTTATTG CGATGGTAGGACCGAGCTGACGAGTGCTGCGGCGTGTTCTACGGCTGTTC TGGTAGCCTTCTA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig14452:35..3897+

>mRNA_Ecto-sp13_S_contig14452.3424.1 ID=mRNA_Ecto-sp13_S_contig14452.3424.1|Name=mRNA_Ecto-sp13_S_contig14452.3424.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=762bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14452:35..3897+ (Ectocarpus species13 EcNAP12_S_4_19m)
TTGATATACGGAGTCATCATCACTTCCTTGATATACCCCGTCGTGGCCCA
CTGGGTGTGGGCCCCAAGCGGCTGGGCGAGCTCGTTTAGGGCCAACGAAG
AGGATCTGCTGGTTGGCTGCGGCGTGGCTGACTTCTCAGGGTCTGGGGTA
GTGCACCTGACAGGTAGGGGGTTGATGGCGCTAGTGGCGGCGTTCTGCGT
ACACCCCCGGGGAGGCAGGTTTGACGCGGAGGGTAAACCCCGTCGCTTGG
AGAGACAAAGTCCTGCTCTGAACGTGCTGGGGACGCTGATACTGTGGGCG
GGCTGGTTCTTCTTCAACGCCTCTGGGGTGGCGTCTTTCAGCAGGCAGCC
TGACGACGCCGCGAAATCTATGCTGAACACGGCGGTATGCCCTTCGGCAG
CCGTGGTTGTGACGATGCTCATTCACTGGATGTACCACCGCAGCTTCGAC
CCGTTCATGGCAACGAATGGCATGCTGGGAGGCCTCGTCGCGATCACCGC
CTCATCCCCCTTGGTGCAAGCGGAGGGGGCGTTTGTCATCGGTGTTGTGT
CCGGAGCGCTGGTGTTTTACGGCAGCAAGCTCTTGCTAAAGTTCAAGATC
GATGACGTGGTGGACGCGAGCGTGGTGCACGGGCTGTGCGGACTGTGGGG
CATGGTAGCGACGGGCCTGTTTACCACCAAGCTAGGCTACGCAAGAGCCT
ACGCCGAGGACCGAGCTGACGAGTGCTGCGGCGTGTTCTACGGCTGTTCT
GGTAGCCTTCTA
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