mRNA_Ecto-sp13_S_contig14423.3402.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig14423.3402.1 vs. uniprot
Match: A0A6H5K730_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K730_9PHAE) HSP 1 Score: 585 bits (1508), Expect = 5.920e-203 Identity = 290/313 (92.65%), Postives = 302/313 (96.49%), Query Frame = 1
Query: 1 EQDVSTVSEAYLLSELFKGFWAASQHVIIDTGDGDFDLLNDGDENHGKCSAIFVGSQPSVGEDGATGQYEQLLAYSAKFQVRLVFFDNAETANLATITTKIGIQQHFSDALLAAASIRLTDLDARVVNPALQTDPSDIYFRPVRVSGDPTGGERNIVADLVDSDGQSISDTDGIWDPNSTMETPGASIAAVTFKGEDGSEEMHVFFAMAWFHMESWAWAHYIMEWATQGVFQGERRFWLGAMVDDHFLGTNPFVYDGESNASDEEERITGEELEGFLSATEALNKLYNAEIVTEFPFNALGILEKAETEYTFT 939
EQDVSTVSEAYLLSELFKGFWAASQHVIIDTGDGDFDLLNDGD NHGKCSAIF+GSQPSVGEDGAT QYEQLLAYSAKFQVRLVFFDNAETANLATITTKIGIQQ+FSD LLAAA IRL D DARVVNPALQTDPS+I+FRPVRVSGDPTGGER IVADLVDSDGQSISDTDGIWDP+STMETPGAS+AAVTFKGEDGSEEMHVFFAMAWFHMESWAWAHYIMEWATQGVFQGERRFWLGAMVDDHFLGTN FVY+G SNASDEEERI+GEEL FLSAT+ALN+LYNAEI+TEFPFNALGILEKAET+YTFT
Sbjct: 42 EQDVSTVSEAYLLSELFKGFWAASQHVIIDTGDGDFDLLNDGDGNHGKCSAIFIGSQPSVGEDGATAQYEQLLAYSAKFQVRLVFFDNAETANLATITTKIGIQQYFSDTLLAAAGIRLKDSDARVVNPALQTDPSEIFFRPVRVSGDPTGGERTIVADLVDSDGQSISDTDGIWDPSSTMETPGASMAAVTFKGEDGSEEMHVFFAMAWFHMESWAWAHYIMEWATQGVFQGERRFWLGAMVDDHFLGTNTFVYNGGSNASDEEERISGEELRDFLSATKALNELYNAEIITEFPFNALGILEKAETKYTFT 354
BLAST of mRNA_Ecto-sp13_S_contig14423.3402.1 vs. uniprot
Match: D7G056_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G056_ECTSI) HSP 1 Score: 212 bits (539), Expect = 3.330e-58 Identity = 124/309 (40.13%), Postives = 178/309 (57.61%), Query Frame = 1
Query: 1 EQDVSTVSEAYLLSELFKGFWAASQHVIIDTGDGDFDLLNDGDENHGKCSAIFVGSQPSVGEDGATGQYEQLLAYSAKFQVRLVFFDNAETANLATITTKIGIQQHFSDALLAAASIRLTDLDARVVNPA-LQTDPS--DIYFRPVRVSGDPTGGERNIVADLVDSDGQSISDT-DGIWDPNSTMETPGASIAAVTFKGEDGSEEMHVFFAMAWFHMESWAWAHYIMEWATQGVFQGERRFWLGAMVDDHFLGTNPFVYDGESNASDEEERITGEELEGFLSATEALNKLYNAEIVTEFPFNALGILEK 915
E+DV V+ AYL +E +KGFW A+Q+V DL+ D +HGKC+ ++VG PS Q +QL YS KF VR+V+FD A+T + ++G+Q +F + A ++ T A + PA + TDPS +++ RPV + D +I+A D +G I+ G+ +P S A V + G DG EEMHVF ++AWF SWAW H+I EW T+G+FQGERRF+LG +VDD FL T ++YD S EE R++G +L+ F ++ A N Y A + TE FN LG+L+K
Sbjct: 619 EKDVGPVASAYLFNEFYKGFWTATQNVQAPPA-AVLDLVEALDADHGKCNVVYVGIVPSA------AQKQQLQDYSRKFNVRIVYFDAADTILDTEVQARLGMQSNFDQPFVGAPRVKRTGGSADSIAPADMLTDPSQNNLFNRPVVTTVDTLPAGVSIMAQYADENGDVIAGVLAGVTNPESA--------AIVEYIGTDGLEEMHVFVSLAWFDTGSWAWGHFISEWGTRGIFQGERRFYLGGVVDDLFLSTGVWIYDPPSFFGPEE-RLSGADLQKFQNSEAAFNTAYGASVKTEHAFNGLGVLDK 911
BLAST of mRNA_Ecto-sp13_S_contig14423.3402.1 vs. uniprot
Match: A0A6H5K3S3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3S3_9PHAE) HSP 1 Score: 206 bits (524), Expect = 7.780e-57 Identity = 124/316 (39.24%), Postives = 178/316 (56.33%), Query Frame = 1
Query: 4 QDVSTVSEAYLLSELFKGFWAASQHVIIDTGDGDFDLLNDGDENHGKCSAIFVGSQPSVGEDGATGQYEQLLAYSAKFQVRLVFFDNAETANLATITTKIGIQQHFSDALLAAASIRLTD---LDARVVNPALQTDPSD--IYFRPVRVSGDPT--GGERNIVADLVDSDGQSISDTDGIWDPNSTMETPGASIAAVTFKGEDGSEEMHVFFAMAWFHMESWAWAHYIMEWATQGVFQGERRFWLGAMVDDHFLGTNPFVYDGESNASDEEERITGEELEGFLSATEALNKLYNAEIVTEFPFNALGILEKAETEY 930
QD +AY+ S +KG+W A Q + T + L + GKC+ ++VG + Q QL YS F+VR+V+F+ AETAN + +++GI Q FS+ L++A I L ARVV L T+P + I+ RPV V+ T G ++A+ VD G ++ S++ P S+AA+ + DG EE+H+FF++AWF SWAWAH+ +EW T+GVFQGERRF+L MVDD FL T F YDG++N E R+T ++ F S +LN Y + IVTE+PFN LGIL + +
Sbjct: 52 QDNGDTPDAYVTSTFYKGYWGAKQVTLTGTSELTNSLTS------GKCNVVYVGIPVTE------AQKVQLQDYSRTFKVRIVYFNAAETANDPEVNSRLGISQDFSEPLISAPFIALATGGAAVARVVPSTLVTNPREFNIFTRPVLVTNLATTGNGTATVMAEYVDDSGANVP---------SSLSFP--SVAAMAYASNDGYEELHLFFSVAWFDTGSWAWAHFFIEWGTKGVFQGERRFYLAGMVDDLFLATGVFEYDGDTNEG-AEVRLTSSDMSAFASFESSLNSQYGSSIVTEWPFNGLGILNVVNSAF 343
BLAST of mRNA_Ecto-sp13_S_contig14423.3402.1 vs. uniprot
Match: D7FLI7_ECTSI (WSC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLI7_ECTSI) HSP 1 Score: 202 bits (513), Expect = 3.520e-55 Identity = 121/307 (39.41%), Postives = 175/307 (57.00%), Query Frame = 1
Query: 31 YLLSELFKGFWA--ASQHVIIDTGDGDFDLLNDGDEN---HGKCSAIFVGSQPSVGEDGATGQYEQLLAYSAKFQVRLVFFDNAETANLATITTKIGIQQHFSDALLAAASIRLTDLDARVVN---PALQTDPS----DIYFRPVRVSGDPTGGERNIVADLVDSDGQSISDTDGIWDPNSTMETPGASIAAVTFKGEDGSEEMHVFFAMAWFHMESWAWAHYIMEWATQGVFQGERRFWLGAMVDDHFLGTNPFVYDGESNASDEEERITGEELEGFLSATEALNKLYN-AEIVTEFPFNALGILE 912
Y++S FKG+W+ +HV+ + D L++ D + HGKC+A++VG PS T Q L AYSA+F+VRLV+F +A T A TTK+G+Q +F+ + A ++L+DL V+ P +TDP+ ++ PV ++ P G ++A VD D + N+ M +++ G DG EE+HVFF + WF +W WAH+ EWAT+G+F GERRF+L A+VDD FL T F YDGE N + +R TGE+L L EALN Y+ ++I+TEF FN GI E
Sbjct: 101 YIMSLFFKGYWSPKTEEHVVKEGDDLTALLVDSSDTSEVPHGKCNAVYVGYAPS------TDQAAALTAYSAQFKVRLVYFPSALTHTTAEFTTKLGVQTYFAGDITTPAFVQLSDLGGEKVSITKPGFKTDPNLFTPALFSYPVIINTVPDDGIE-VLAQYVDGDSEPYLSGAAGDQENAAM---------LSYTGADGHEELHVFFTIGWFDAGAWPWAHFFNEWATKGIFMGERRFYLAAVVDDLFLSTPEFEYDGEMNEAALSQRCTGEDLTNLLRVQEALNTQYSGSDIITEFAFNGAGIAE 391
BLAST of mRNA_Ecto-sp13_S_contig14423.3402.1 vs. uniprot
Match: A0A6H5JPQ4_9PHAE (WSC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPQ4_9PHAE) HSP 1 Score: 199 bits (507), Expect = 5.220e-54 Identity = 121/306 (39.54%), Postives = 176/306 (57.52%), Query Frame = 1
Query: 31 YLLSELFKGFWA--ASQHVIIDTGDGDFDLLNDGDEN-HGKCSAIFVGSQPSVGEDGATGQYEQLLAYSAKFQVRLVFFDNAETANLATITTKIGIQQHFSDALLAAASIRLTDLDARVVN---PALQTDPS----DIYFRPVRVSGDPTGGERNIVADLVDSDGQSISDTDGIWDPN-STMETPGASIAAVTFKGEDGSEEMHVFFAMAWFHMESWAWAHYIMEWATQGVFQGERRFWLGAMVDDHFLGTNPFVYDGESNASDEEERITGEELEGFLSATEALNKLYN-AEIVTEFPFNALGILE 912
Y++S FKG+W+ ++V+ +T D L++ D HG C+A+++G PS T Q L AYSA+F+VRLV+F +A T A T K+GIQ +F+ + A ++L+DL + V+ P QTDP+ ++ PV ++ P G ++A VDS G DP S + A +++ G DG EE+HVF + WF +W WAH+ EWAT+G+F GERRF+L A+VDD FL T F Y+GE N + +R TGE+L LS +ALN Y+ ++I+TEF FN GI E
Sbjct: 302 YIMSLFFKGYWSPKTEEYVVSETDDLTALLVDSTDATPHGLCNAVYIGYAPS------TSQVAALTAYSAQFKVRLVYFPSALTHTTAEFTAKLGIQTYFAGDITTPAFVQLSDLGSTKVSITQPGFQTDPNLFSPPLFSYPVIINAVPEEGVVEVLAQYVDSAG----------DPYLSGFAGDQENAAVLSYTGADGHEELHVFNTIGWFDAGAWPWAHFYNEWATKGIFMGERRFYLAAVVDDLFLSTPEFEYNGEMNEAAVAQRCTGEDLSNLLSVQQALNTQYSGSDIITEFAFNGGGIAE 591
BLAST of mRNA_Ecto-sp13_S_contig14423.3402.1 vs. uniprot
Match: D7FLJ1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLJ1_ECTSI) HSP 1 Score: 198 bits (503), Expect = 9.660e-54 Identity = 119/307 (38.76%), Postives = 177/307 (57.65%), Query Frame = 1
Query: 31 YLLSELFKGFWA--ASQHVIIDTGDGDFDLLNDGDEN---HGKCSAIFVGSQPSVGEDGATGQYEQLLAYSAKFQVRLVFFDNAETANLATITTKIGIQQHFSDALLAAASIRLTDLDAR---VVNPALQTDPSDI----YFRPVRVSGDPTGGERNIVADLVDSDGQSISDTDGIWDPNSTMETPGASIAAVTFKGEDGSEEMHVFFAMAWFHMESWAWAHYIMEWATQGVFQGERRFWLGAMVDDHFLGTNPFVYDGESNASDEEERITGEELEGFLSATEALNKLY-NAEIVTEFPFNALGILE 912
Y++S FKG+W+ ++V+ +T D L++ D + HGKC+A+++G PS T Q L AYSA+++VRLV+F +A T + TTK+GIQ +F+ ++ A ++L+DL A + P +TDP+ + + PV V+ P G ++A VDSD + N+ M +++ G DG EE+HVF + WF +W WAH+ EWAT+G+F GERRF+L A+VDD FL T F YDG N + +R TGE+L LS ++LN LY ++I+TEF FN GI E
Sbjct: 121 YIMSLFFKGYWSPKTEEYVVSETDDLSALLVDSTDTSGVPHGKCNAVYIGYAPS------TAQVAALTAYSAQYKVRLVYFPSALTHTTESFTTKLGIQTYFAGDIVTPAFVQLSDLGAEKVTITQPGFKTDPNVVTPALFSYPVIVNTVPEEGIE-VLAQYVDSDSEPYLSGAAGDQENAAM---------LSYTGADGHEELHVFNTIGWFDAGAWPWAHFYNEWATKGIFMGERRFYLAAVVDDLFLSTPEFEYDGVLNEAALSQRCTGEDLTNLLSVQQSLNALYAGSDIITEFAFNGGGIAE 411
BLAST of mRNA_Ecto-sp13_S_contig14423.3402.1 vs. uniprot
Match: D7FLJ3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLJ3_ECTSI) HSP 1 Score: 197 bits (502), Expect = 2.350e-53 Identity = 122/312 (39.10%), Postives = 178/312 (57.05%), Query Frame = 1
Query: 13 STVSEAYLLSELFKGFWA--ASQHVIIDTGDGDFDLLNDGDEN-HGKCSAIFVGSQPSVGEDGATGQYEQLLAYSAKFQVRLVFFDNAETANLATITTKIGIQQHFSDALLAAASIRLT---DLDARVVNPALQTDPS----DIYFRPVRVSGDPTGGERNIVADLVDSDGQS-ISDTDGIWDPNSTMETPGASIAAVTFKGEDGSEEMHVFFAMAWFHMESWAWAHYIMEWATQGVFQGERRFWLGAMVDDHFLGTNPFVYDGESNASDEEERITGEELEGFLSATEALNKLYN-AEIVTEFPFNALGILE 912
ST Y++S FKG+W+ + V+ DT D L++ D HGKC+A+++G PS T Q L AYSA+++VRLV+ +A T A TTK+GIQ +F+ ++ A ++L+ D + P QTDP+ ++ PV ++ P G ++A VDS G+ +S G + + A +++ G DG EE+HVF + WF +W WAH+ EWAT+G+F GERRF+LGA+VDD FL T F YDG N + +R TG++L LS +ALN Y+ +EI+TEF FN GI E
Sbjct: 295 STNPGLYVMSLFFKGYWSPKTEEFVVSDTDDLTALLVDSTDATPHGKCNAVYIGYAPS------TAQVAALTAYSAQYKVRLVYLPSALTHTTAEFTTKLGIQTYFAGDIMTPAYVQLSALGDEKVSITQPGFQTDPNLFTPALFSYPVIINAVPEAGIE-VLAQYVDSAGEPYLSGAAGDQE----------NAAVLSYTGADGHEELHVFNTIGWFDAGAWPWAHFYNEWATKGIFMGERRFYLGAVVDDLFLSTPEFEYDGGMNEAAVSQRCTGDDLSQLLSVQQALNTQYSGSEIITEFAFNGGGIAE 589
BLAST of mRNA_Ecto-sp13_S_contig14423.3402.1 vs. uniprot
Match: D7FLI8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLI8_ECTSI) HSP 1 Score: 197 bits (501), Expect = 3.570e-53 Identity = 121/306 (39.54%), Postives = 180/306 (58.82%), Query Frame = 1
Query: 31 YLLSELFKGFWA--ASQHVIIDTGDGDFDLLNDGDEN-HGKCSAIFVGSQPSVGEDGATGQYEQLLAYSAKFQVRLVFFDNAETANLATITTKIGIQQHFSDALLAAASIRLTDLDARVVN---PALQTDPS----DIYFRPVRVSGDPTGGERNIVADLVDSDGQS-ISDTDGIWDPNSTMETPGASIAAVTFKGEDGSEEMHVFFAMAWFHMESWAWAHYIMEWATQGVFQGERRFWLGAMVDDHFLGTNPFVYDGESNASDEEERITGEELEGFLSATEALNKLYN-AEIVTEFPFNALGILE 912
Y++S FKG+W+ ++V+ +T D L++ D HGKC+A++VG PS T Q L AYSA+F+VRLV+F +A T A TTK+GIQ +F+ ++ A ++L+DL + V+ P +TDP+ ++ PV ++ P G ++A DS G+ +S G + + A +++ G DG EE+HVF + WF +W WAH+ EWAT+G+F GERRF+L A+VDD FL T F YDG+ N + +R TGE+L LS +ALN Y+ ++I+TEF FN GI E
Sbjct: 406 YIMSLFFKGYWSPRTEEYVVSETDDLTALLVDSSDTTPHGKCNAVYVGYAPS------TDQVAALTAYSAQFKVRLVYFPSALTHTTAEFTTKLGIQTYFAGDIVTPAFVQLSDLGSTKVSITQPGFKTDPNLFTPALFSYPVIMNEVPETGIE-VLAQYADSAGEPYLSGAAGDQE----------NAAILSYTGADGHEELHVFNTIGWFDAGAWPWAHFYNEWATKGIFMGERRFYLAAVVDDLFLSTPEFEYDGDMNEAAVAQRCTGEDLTNLLSVQQALNTQYSGSDIITEFAFNGGGIAE 694
BLAST of mRNA_Ecto-sp13_S_contig14423.3402.1 vs. uniprot
Match: D8LD68_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD68_ECTSI) HSP 1 Score: 152 bits (383), Expect = 1.260e-38 Identity = 84/191 (43.98%), Postives = 118/191 (61.78%), Query Frame = 1
Query: 370 ARVVNPALQTDPSD--IYFRPVRVSGDPT--GGERNIVADLVDSDGQSISDTDGIWDPNSTMETPGASIAAVTFKGEDGSEEMHVFFAMAWFHMESWAWAHYIMEWATQGVFQGERRFWLGAMVDDHFLGTNPFVYDGESNASDEEERITGEELEGFLSATEALNKLYNAEIVTEFPFNALGILEKAETEY 930
ARVV L T+P + I+ RPV V+ T G ++A+ VD G ++ S++ P S+AA+ + +DG EE+H+FF++AWF SWAWAH+ +EW T+GVFQGERRF+L MVDD FL T F YDG++N E R+T ++ F S +LN Y + IVTE+PFN LGILE ++ +
Sbjct: 8 ARVVPSTLTTNPREFNIFTRPVLVTNLATTGNGTATVMAEYVDDSGANVP---------SSLSFP--SVAAMAYASDDGYEELHLFFSVAWFDTGSWAWAHFFIEWGTKGVFQGERRFYLAGMVDDLFLATGVFEYDGDTNEG-AEVRLTSSDMSAFASFESSLNSQYGSSIVTEWPFNGLGILEVVDSAF 186
BLAST of mRNA_Ecto-sp13_S_contig14423.3402.1 vs. uniprot
Match: D7G022_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G022_ECTSI) HSP 1 Score: 155 bits (392), Expect = 1.310e-38 Identity = 90/230 (39.13%), Postives = 133/230 (57.83%), Query Frame = 1
Query: 238 QVRLVFFDNAETANLATITTKIGIQQHFSDALLAAASIRLTDLDARVVNPA-LQTDPS--DIYFRPVRVSGDPTGGERNIVADLVDSDGQSISDT-DGIWDPNSTMETPGASIAAVTFKGEDGSEEMHVFFAMAWFHMESWAWAHYIMEWATQGVFQGERRFWLGAMVDDHFLGTNPFVYDGESNASDEEERITGEELEGFLSATEALNKLYNAEIVTEFPFNALGILEK 915
QVR+V+FD A+T + ++G+Q +F + A ++ T + PA + TDP+ +++ RPV + D +I+A D +G +I G+ +P S A V + G DG EEMHVF ++AWF SWAW H+I EW T+G+FQGERRF+LG +VDD FL T ++YD S EE R++G +L+ F ++ A N Y A + TE FN LG+L+K
Sbjct: 678 QVRIVYFDIADTILDTEVQARLGMQSNFDQPFVGAPRVKRTGGSTDSIAPADMLTDPTQNNLFNRPVVTTVDTLPAGVSILAQYADDNGDAIGGVLAGVTNPQSA--------AIVEYIGADGLEEMHVFISLAWFDTGSWAWGHFISEWGTRGIFQGERRFYLGGVVDDLFLSTGVWIYDPPSFFGPEE-RLSGADLQKFQNSEAAFNTEYGASVKTEHAFNGLGVLDK 898 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14423.3402.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig14423.3402.1 >prot_Ecto-sp13_S_contig14423.3402.1 ID=prot_Ecto-sp13_S_contig14423.3402.1|Name=mRNA_Ecto-sp13_S_contig14423.3402.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=313bp EQDVSTVSEAYLLSELFKGFWAASQHVIIDTGDGDFDLLNDGDENHGKCSback to top mRNA from alignment at Ecto-sp13_S_contig14423:3..3717- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig14423.3402.1 ID=mRNA_Ecto-sp13_S_contig14423.3402.1|Name=mRNA_Ecto-sp13_S_contig14423.3402.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3715bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14423:3..3717- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig14423:3..3717- >mRNA_Ecto-sp13_S_contig14423.3402.1 ID=mRNA_Ecto-sp13_S_contig14423.3402.1|Name=mRNA_Ecto-sp13_S_contig14423.3402.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=939bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14423:3..3717- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |