mRNA_Ecto-sp13_S_contig14423.3402.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig14423.3402.1
Unique NamemRNA_Ecto-sp13_S_contig14423.3402.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig14423.3402.1 vs. uniprot
Match: A0A6H5K730_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K730_9PHAE)

HSP 1 Score: 585 bits (1508), Expect = 5.920e-203
Identity = 290/313 (92.65%), Postives = 302/313 (96.49%), Query Frame = 1
Query:    1 EQDVSTVSEAYLLSELFKGFWAASQHVIIDTGDGDFDLLNDGDENHGKCSAIFVGSQPSVGEDGATGQYEQLLAYSAKFQVRLVFFDNAETANLATITTKIGIQQHFSDALLAAASIRLTDLDARVVNPALQTDPSDIYFRPVRVSGDPTGGERNIVADLVDSDGQSISDTDGIWDPNSTMETPGASIAAVTFKGEDGSEEMHVFFAMAWFHMESWAWAHYIMEWATQGVFQGERRFWLGAMVDDHFLGTNPFVYDGESNASDEEERITGEELEGFLSATEALNKLYNAEIVTEFPFNALGILEKAETEYTFT 939
            EQDVSTVSEAYLLSELFKGFWAASQHVIIDTGDGDFDLLNDGD NHGKCSAIF+GSQPSVGEDGAT QYEQLLAYSAKFQVRLVFFDNAETANLATITTKIGIQQ+FSD LLAAA IRL D DARVVNPALQTDPS+I+FRPVRVSGDPTGGER IVADLVDSDGQSISDTDGIWDP+STMETPGAS+AAVTFKGEDGSEEMHVFFAMAWFHMESWAWAHYIMEWATQGVFQGERRFWLGAMVDDHFLGTN FVY+G SNASDEEERI+GEEL  FLSAT+ALN+LYNAEI+TEFPFNALGILEKAET+YTFT
Sbjct:   42 EQDVSTVSEAYLLSELFKGFWAASQHVIIDTGDGDFDLLNDGDGNHGKCSAIFIGSQPSVGEDGATAQYEQLLAYSAKFQVRLVFFDNAETANLATITTKIGIQQYFSDTLLAAAGIRLKDSDARVVNPALQTDPSEIFFRPVRVSGDPTGGERTIVADLVDSDGQSISDTDGIWDPSSTMETPGASMAAVTFKGEDGSEEMHVFFAMAWFHMESWAWAHYIMEWATQGVFQGERRFWLGAMVDDHFLGTNTFVYNGGSNASDEEERISGEELRDFLSATKALNELYNAEIITEFPFNALGILEKAETKYTFT 354          
BLAST of mRNA_Ecto-sp13_S_contig14423.3402.1 vs. uniprot
Match: D7G056_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G056_ECTSI)

HSP 1 Score: 212 bits (539), Expect = 3.330e-58
Identity = 124/309 (40.13%), Postives = 178/309 (57.61%), Query Frame = 1
Query:    1 EQDVSTVSEAYLLSELFKGFWAASQHVIIDTGDGDFDLLNDGDENHGKCSAIFVGSQPSVGEDGATGQYEQLLAYSAKFQVRLVFFDNAETANLATITTKIGIQQHFSDALLAAASIRLTDLDARVVNPA-LQTDPS--DIYFRPVRVSGDPTGGERNIVADLVDSDGQSISDT-DGIWDPNSTMETPGASIAAVTFKGEDGSEEMHVFFAMAWFHMESWAWAHYIMEWATQGVFQGERRFWLGAMVDDHFLGTNPFVYDGESNASDEEERITGEELEGFLSATEALNKLYNAEIVTEFPFNALGILEK 915
            E+DV  V+ AYL +E +KGFW A+Q+V         DL+   D +HGKC+ ++VG  PS        Q +QL  YS KF VR+V+FD A+T     +  ++G+Q +F    + A  ++ T   A  + PA + TDPS  +++ RPV  + D      +I+A   D +G  I+    G+ +P S         A V + G DG EEMHVF ++AWF   SWAW H+I EW T+G+FQGERRF+LG +VDD FL T  ++YD  S    EE R++G +L+ F ++  A N  Y A + TE  FN LG+L+K
Sbjct:  619 EKDVGPVASAYLFNEFYKGFWTATQNVQAPPA-AVLDLVEALDADHGKCNVVYVGIVPSA------AQKQQLQDYSRKFNVRIVYFDAADTILDTEVQARLGMQSNFDQPFVGAPRVKRTGGSADSIAPADMLTDPSQNNLFNRPVVTTVDTLPAGVSIMAQYADENGDVIAGVLAGVTNPESA--------AIVEYIGTDGLEEMHVFVSLAWFDTGSWAWGHFISEWGTRGIFQGERRFYLGGVVDDLFLSTGVWIYDPPSFFGPEE-RLSGADLQKFQNSEAAFNTAYGASVKTEHAFNGLGVLDK 911          
BLAST of mRNA_Ecto-sp13_S_contig14423.3402.1 vs. uniprot
Match: A0A6H5K3S3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3S3_9PHAE)

HSP 1 Score: 206 bits (524), Expect = 7.780e-57
Identity = 124/316 (39.24%), Postives = 178/316 (56.33%), Query Frame = 1
Query:    4 QDVSTVSEAYLLSELFKGFWAASQHVIIDTGDGDFDLLNDGDENHGKCSAIFVGSQPSVGEDGATGQYEQLLAYSAKFQVRLVFFDNAETANLATITTKIGIQQHFSDALLAAASIRLTD---LDARVVNPALQTDPSD--IYFRPVRVSGDPT--GGERNIVADLVDSDGQSISDTDGIWDPNSTMETPGASIAAVTFKGEDGSEEMHVFFAMAWFHMESWAWAHYIMEWATQGVFQGERRFWLGAMVDDHFLGTNPFVYDGESNASDEEERITGEELEGFLSATEALNKLYNAEIVTEFPFNALGILEKAETEY 930
            QD     +AY+ S  +KG+W A Q  +  T +    L +      GKC+ ++VG   +        Q  QL  YS  F+VR+V+F+ AETAN   + +++GI Q FS+ L++A  I L       ARVV   L T+P +  I+ RPV V+   T   G   ++A+ VD  G ++          S++  P  S+AA+ +   DG EE+H+FF++AWF   SWAWAH+ +EW T+GVFQGERRF+L  MVDD FL T  F YDG++N    E R+T  ++  F S   +LN  Y + IVTE+PFN LGIL    + +
Sbjct:   52 QDNGDTPDAYVTSTFYKGYWGAKQVTLTGTSELTNSLTS------GKCNVVYVGIPVTE------AQKVQLQDYSRTFKVRIVYFNAAETANDPEVNSRLGISQDFSEPLISAPFIALATGGAAVARVVPSTLVTNPREFNIFTRPVLVTNLATTGNGTATVMAEYVDDSGANVP---------SSLSFP--SVAAMAYASNDGYEELHLFFSVAWFDTGSWAWAHFFIEWGTKGVFQGERRFYLAGMVDDLFLATGVFEYDGDTNEG-AEVRLTSSDMSAFASFESSLNSQYGSSIVTEWPFNGLGILNVVNSAF 343          
BLAST of mRNA_Ecto-sp13_S_contig14423.3402.1 vs. uniprot
Match: D7FLI7_ECTSI (WSC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLI7_ECTSI)

HSP 1 Score: 202 bits (513), Expect = 3.520e-55
Identity = 121/307 (39.41%), Postives = 175/307 (57.00%), Query Frame = 1
Query:   31 YLLSELFKGFWA--ASQHVIIDTGDGDFDLLNDGDEN---HGKCSAIFVGSQPSVGEDGATGQYEQLLAYSAKFQVRLVFFDNAETANLATITTKIGIQQHFSDALLAAASIRLTDLDARVVN---PALQTDPS----DIYFRPVRVSGDPTGGERNIVADLVDSDGQSISDTDGIWDPNSTMETPGASIAAVTFKGEDGSEEMHVFFAMAWFHMESWAWAHYIMEWATQGVFQGERRFWLGAMVDDHFLGTNPFVYDGESNASDEEERITGEELEGFLSATEALNKLYN-AEIVTEFPFNALGILE 912
            Y++S  FKG+W+    +HV+ +  D    L++  D +   HGKC+A++VG  PS      T Q   L AYSA+F+VRLV+F +A T   A  TTK+G+Q +F+  +   A ++L+DL    V+   P  +TDP+     ++  PV ++  P  G   ++A  VD D +           N+ M         +++ G DG EE+HVFF + WF   +W WAH+  EWAT+G+F GERRF+L A+VDD FL T  F YDGE N +   +R TGE+L   L   EALN  Y+ ++I+TEF FN  GI E
Sbjct:  101 YIMSLFFKGYWSPKTEEHVVKEGDDLTALLVDSSDTSEVPHGKCNAVYVGYAPS------TDQAAALTAYSAQFKVRLVYFPSALTHTTAEFTTKLGVQTYFAGDITTPAFVQLSDLGGEKVSITKPGFKTDPNLFTPALFSYPVIINTVPDDGIE-VLAQYVDGDSEPYLSGAAGDQENAAM---------LSYTGADGHEELHVFFTIGWFDAGAWPWAHFFNEWATKGIFMGERRFYLAAVVDDLFLSTPEFEYDGEMNEAALSQRCTGEDLTNLLRVQEALNTQYSGSDIITEFAFNGAGIAE 391          
BLAST of mRNA_Ecto-sp13_S_contig14423.3402.1 vs. uniprot
Match: A0A6H5JPQ4_9PHAE (WSC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPQ4_9PHAE)

HSP 1 Score: 199 bits (507), Expect = 5.220e-54
Identity = 121/306 (39.54%), Postives = 176/306 (57.52%), Query Frame = 1
Query:   31 YLLSELFKGFWA--ASQHVIIDTGDGDFDLLNDGDEN-HGKCSAIFVGSQPSVGEDGATGQYEQLLAYSAKFQVRLVFFDNAETANLATITTKIGIQQHFSDALLAAASIRLTDLDARVVN---PALQTDPS----DIYFRPVRVSGDPTGGERNIVADLVDSDGQSISDTDGIWDPN-STMETPGASIAAVTFKGEDGSEEMHVFFAMAWFHMESWAWAHYIMEWATQGVFQGERRFWLGAMVDDHFLGTNPFVYDGESNASDEEERITGEELEGFLSATEALNKLYN-AEIVTEFPFNALGILE 912
            Y++S  FKG+W+    ++V+ +T D    L++  D   HG C+A+++G  PS      T Q   L AYSA+F+VRLV+F +A T   A  T K+GIQ +F+  +   A ++L+DL +  V+   P  QTDP+     ++  PV ++  P  G   ++A  VDS G          DP  S       + A +++ G DG EE+HVF  + WF   +W WAH+  EWAT+G+F GERRF+L A+VDD FL T  F Y+GE N +   +R TGE+L   LS  +ALN  Y+ ++I+TEF FN  GI E
Sbjct:  302 YIMSLFFKGYWSPKTEEYVVSETDDLTALLVDSTDATPHGLCNAVYIGYAPS------TSQVAALTAYSAQFKVRLVYFPSALTHTTAEFTAKLGIQTYFAGDITTPAFVQLSDLGSTKVSITQPGFQTDPNLFSPPLFSYPVIINAVPEEGVVEVLAQYVDSAG----------DPYLSGFAGDQENAAVLSYTGADGHEELHVFNTIGWFDAGAWPWAHFYNEWATKGIFMGERRFYLAAVVDDLFLSTPEFEYNGEMNEAAVAQRCTGEDLSNLLSVQQALNTQYSGSDIITEFAFNGGGIAE 591          
BLAST of mRNA_Ecto-sp13_S_contig14423.3402.1 vs. uniprot
Match: D7FLJ1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLJ1_ECTSI)

HSP 1 Score: 198 bits (503), Expect = 9.660e-54
Identity = 119/307 (38.76%), Postives = 177/307 (57.65%), Query Frame = 1
Query:   31 YLLSELFKGFWA--ASQHVIIDTGDGDFDLLNDGDEN---HGKCSAIFVGSQPSVGEDGATGQYEQLLAYSAKFQVRLVFFDNAETANLATITTKIGIQQHFSDALLAAASIRLTDLDAR---VVNPALQTDPSDI----YFRPVRVSGDPTGGERNIVADLVDSDGQSISDTDGIWDPNSTMETPGASIAAVTFKGEDGSEEMHVFFAMAWFHMESWAWAHYIMEWATQGVFQGERRFWLGAMVDDHFLGTNPFVYDGESNASDEEERITGEELEGFLSATEALNKLY-NAEIVTEFPFNALGILE 912
            Y++S  FKG+W+    ++V+ +T D    L++  D +   HGKC+A+++G  PS      T Q   L AYSA+++VRLV+F +A T    + TTK+GIQ +F+  ++  A ++L+DL A    +  P  +TDP+ +    +  PV V+  P  G   ++A  VDSD +           N+ M         +++ G DG EE+HVF  + WF   +W WAH+  EWAT+G+F GERRF+L A+VDD FL T  F YDG  N +   +R TGE+L   LS  ++LN LY  ++I+TEF FN  GI E
Sbjct:  121 YIMSLFFKGYWSPKTEEYVVSETDDLSALLVDSTDTSGVPHGKCNAVYIGYAPS------TAQVAALTAYSAQYKVRLVYFPSALTHTTESFTTKLGIQTYFAGDIVTPAFVQLSDLGAEKVTITQPGFKTDPNVVTPALFSYPVIVNTVPEEGIE-VLAQYVDSDSEPYLSGAAGDQENAAM---------LSYTGADGHEELHVFNTIGWFDAGAWPWAHFYNEWATKGIFMGERRFYLAAVVDDLFLSTPEFEYDGVLNEAALSQRCTGEDLTNLLSVQQSLNALYAGSDIITEFAFNGGGIAE 411          
BLAST of mRNA_Ecto-sp13_S_contig14423.3402.1 vs. uniprot
Match: D7FLJ3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLJ3_ECTSI)

HSP 1 Score: 197 bits (502), Expect = 2.350e-53
Identity = 122/312 (39.10%), Postives = 178/312 (57.05%), Query Frame = 1
Query:   13 STVSEAYLLSELFKGFWA--ASQHVIIDTGDGDFDLLNDGDEN-HGKCSAIFVGSQPSVGEDGATGQYEQLLAYSAKFQVRLVFFDNAETANLATITTKIGIQQHFSDALLAAASIRLT---DLDARVVNPALQTDPS----DIYFRPVRVSGDPTGGERNIVADLVDSDGQS-ISDTDGIWDPNSTMETPGASIAAVTFKGEDGSEEMHVFFAMAWFHMESWAWAHYIMEWATQGVFQGERRFWLGAMVDDHFLGTNPFVYDGESNASDEEERITGEELEGFLSATEALNKLYN-AEIVTEFPFNALGILE 912
            ST    Y++S  FKG+W+    + V+ DT D    L++  D   HGKC+A+++G  PS      T Q   L AYSA+++VRLV+  +A T   A  TTK+GIQ +F+  ++  A ++L+   D    +  P  QTDP+     ++  PV ++  P  G   ++A  VDS G+  +S   G  +          + A +++ G DG EE+HVF  + WF   +W WAH+  EWAT+G+F GERRF+LGA+VDD FL T  F YDG  N +   +R TG++L   LS  +ALN  Y+ +EI+TEF FN  GI E
Sbjct:  295 STNPGLYVMSLFFKGYWSPKTEEFVVSDTDDLTALLVDSTDATPHGKCNAVYIGYAPS------TAQVAALTAYSAQYKVRLVYLPSALTHTTAEFTTKLGIQTYFAGDIMTPAYVQLSALGDEKVSITQPGFQTDPNLFTPALFSYPVIINAVPEAGIE-VLAQYVDSAGEPYLSGAAGDQE----------NAAVLSYTGADGHEELHVFNTIGWFDAGAWPWAHFYNEWATKGIFMGERRFYLGAVVDDLFLSTPEFEYDGGMNEAAVSQRCTGDDLSQLLSVQQALNTQYSGSEIITEFAFNGGGIAE 589          
BLAST of mRNA_Ecto-sp13_S_contig14423.3402.1 vs. uniprot
Match: D7FLI8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLI8_ECTSI)

HSP 1 Score: 197 bits (501), Expect = 3.570e-53
Identity = 121/306 (39.54%), Postives = 180/306 (58.82%), Query Frame = 1
Query:   31 YLLSELFKGFWA--ASQHVIIDTGDGDFDLLNDGDEN-HGKCSAIFVGSQPSVGEDGATGQYEQLLAYSAKFQVRLVFFDNAETANLATITTKIGIQQHFSDALLAAASIRLTDLDARVVN---PALQTDPS----DIYFRPVRVSGDPTGGERNIVADLVDSDGQS-ISDTDGIWDPNSTMETPGASIAAVTFKGEDGSEEMHVFFAMAWFHMESWAWAHYIMEWATQGVFQGERRFWLGAMVDDHFLGTNPFVYDGESNASDEEERITGEELEGFLSATEALNKLYN-AEIVTEFPFNALGILE 912
            Y++S  FKG+W+    ++V+ +T D    L++  D   HGKC+A++VG  PS      T Q   L AYSA+F+VRLV+F +A T   A  TTK+GIQ +F+  ++  A ++L+DL +  V+   P  +TDP+     ++  PV ++  P  G   ++A   DS G+  +S   G  +          + A +++ G DG EE+HVF  + WF   +W WAH+  EWAT+G+F GERRF+L A+VDD FL T  F YDG+ N +   +R TGE+L   LS  +ALN  Y+ ++I+TEF FN  GI E
Sbjct:  406 YIMSLFFKGYWSPRTEEYVVSETDDLTALLVDSSDTTPHGKCNAVYVGYAPS------TDQVAALTAYSAQFKVRLVYFPSALTHTTAEFTTKLGIQTYFAGDIVTPAFVQLSDLGSTKVSITQPGFKTDPNLFTPALFSYPVIMNEVPETGIE-VLAQYADSAGEPYLSGAAGDQE----------NAAILSYTGADGHEELHVFNTIGWFDAGAWPWAHFYNEWATKGIFMGERRFYLAAVVDDLFLSTPEFEYDGDMNEAAVAQRCTGEDLTNLLSVQQALNTQYSGSDIITEFAFNGGGIAE 694          
BLAST of mRNA_Ecto-sp13_S_contig14423.3402.1 vs. uniprot
Match: D8LD68_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD68_ECTSI)

HSP 1 Score: 152 bits (383), Expect = 1.260e-38
Identity = 84/191 (43.98%), Postives = 118/191 (61.78%), Query Frame = 1
Query:  370 ARVVNPALQTDPSD--IYFRPVRVSGDPT--GGERNIVADLVDSDGQSISDTDGIWDPNSTMETPGASIAAVTFKGEDGSEEMHVFFAMAWFHMESWAWAHYIMEWATQGVFQGERRFWLGAMVDDHFLGTNPFVYDGESNASDEEERITGEELEGFLSATEALNKLYNAEIVTEFPFNALGILEKAETEY 930
            ARVV   L T+P +  I+ RPV V+   T   G   ++A+ VD  G ++          S++  P  S+AA+ +  +DG EE+H+FF++AWF   SWAWAH+ +EW T+GVFQGERRF+L  MVDD FL T  F YDG++N    E R+T  ++  F S   +LN  Y + IVTE+PFN LGILE  ++ +
Sbjct:    8 ARVVPSTLTTNPREFNIFTRPVLVTNLATTGNGTATVMAEYVDDSGANVP---------SSLSFP--SVAAMAYASDDGYEELHLFFSVAWFDTGSWAWAHFFIEWGTKGVFQGERRFYLAGMVDDLFLATGVFEYDGDTNEG-AEVRLTSSDMSAFASFESSLNSQYGSSIVTEWPFNGLGILEVVDSAF 186          
BLAST of mRNA_Ecto-sp13_S_contig14423.3402.1 vs. uniprot
Match: D7G022_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G022_ECTSI)

HSP 1 Score: 155 bits (392), Expect = 1.310e-38
Identity = 90/230 (39.13%), Postives = 133/230 (57.83%), Query Frame = 1
Query:  238 QVRLVFFDNAETANLATITTKIGIQQHFSDALLAAASIRLTDLDARVVNPA-LQTDPS--DIYFRPVRVSGDPTGGERNIVADLVDSDGQSISDT-DGIWDPNSTMETPGASIAAVTFKGEDGSEEMHVFFAMAWFHMESWAWAHYIMEWATQGVFQGERRFWLGAMVDDHFLGTNPFVYDGESNASDEEERITGEELEGFLSATEALNKLYNAEIVTEFPFNALGILEK 915
            QVR+V+FD A+T     +  ++G+Q +F    + A  ++ T      + PA + TDP+  +++ RPV  + D      +I+A   D +G +I     G+ +P S         A V + G DG EEMHVF ++AWF   SWAW H+I EW T+G+FQGERRF+LG +VDD FL T  ++YD  S    EE R++G +L+ F ++  A N  Y A + TE  FN LG+L+K
Sbjct:  678 QVRIVYFDIADTILDTEVQARLGMQSNFDQPFVGAPRVKRTGGSTDSIAPADMLTDPTQNNLFNRPVVTTVDTLPAGVSILAQYADDNGDAIGGVLAGVTNPQSA--------AIVEYIGADGLEEMHVFISLAWFDTGSWAWGHFISEWGTRGIFQGERRFYLGGVVDDLFLSTGVWIYDPPSFFGPEE-RLSGADLQKFQNSEAAFNTEYGASVKTEHAFNGLGVLDK 898          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14423.3402.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 12
Match NameE-valueIdentityDescription
A0A6H5K730_9PHAE5.920e-20392.65Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7G056_ECTSI3.330e-5840.13Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5K3S3_9PHAE7.780e-5739.24Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FLI7_ECTSI3.520e-5539.41WSC domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JPQ4_9PHAE5.220e-5439.54WSC domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FLJ1_ECTSI9.660e-5438.76Uncharacterized protein n=2 Tax=Ectocarpus silicul... [more]
D7FLJ3_ECTSI2.350e-5339.10Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FLI8_ECTSI3.570e-5339.54Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LD68_ECTSI1.260e-3843.98Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G022_ECTSI1.310e-3839.13Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig14423contigEcto-sp13_S_contig14423:3..3717 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score595.5
Seed ortholog evalue1.4e-167
Seed eggNOG ortholog2880.D8LJM4
Model size939
Hectar predicted targeting categoryother localisation
Exons8
EggNOG OGs28IRF@1,2QR2R@2759
Cds size939
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig14423.3402.1prot_Ecto-sp13_S_contig14423.3402.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig14423 3..3717 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462769.8527641-CDS-Ecto-sp13_S_contig14423:2..261681462769.8527641-CDS-Ecto-sp13_S_contig14423:2..26Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14423 3..26 -
1681462769.8626726-CDS-Ecto-sp13_S_contig14423:306..4291681462769.8626726-CDS-Ecto-sp13_S_contig14423:306..429Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14423 307..429 -
1681462769.873929-CDS-Ecto-sp13_S_contig14423:1006..11021681462769.873929-CDS-Ecto-sp13_S_contig14423:1006..1102Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14423 1007..1102 -
1681462769.8833575-CDS-Ecto-sp13_S_contig14423:1358..15781681462769.8833575-CDS-Ecto-sp13_S_contig14423:1358..1578Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14423 1359..1578 -
1681462769.8932238-CDS-Ecto-sp13_S_contig14423:1924..20391681462769.8932238-CDS-Ecto-sp13_S_contig14423:1924..2039Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14423 1925..2039 -
1681462769.9035747-CDS-Ecto-sp13_S_contig14423:2509..26301681462769.9035747-CDS-Ecto-sp13_S_contig14423:2509..2630Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14423 2510..2630 -
1681462769.9126873-CDS-Ecto-sp13_S_contig14423:3049..32141681462769.9126873-CDS-Ecto-sp13_S_contig14423:3049..3214Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14423 3050..3214 -
1681462769.9221976-CDS-Ecto-sp13_S_contig14423:3642..37171681462769.9221976-CDS-Ecto-sp13_S_contig14423:3642..3717Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14423 3643..3717 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig14423.3402.1

>prot_Ecto-sp13_S_contig14423.3402.1 ID=prot_Ecto-sp13_S_contig14423.3402.1|Name=mRNA_Ecto-sp13_S_contig14423.3402.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=313bp
EQDVSTVSEAYLLSELFKGFWAASQHVIIDTGDGDFDLLNDGDENHGKCS
AIFVGSQPSVGEDGATGQYEQLLAYSAKFQVRLVFFDNAETANLATITTK
IGIQQHFSDALLAAASIRLTDLDARVVNPALQTDPSDIYFRPVRVSGDPT
GGERNIVADLVDSDGQSISDTDGIWDPNSTMETPGASIAAVTFKGEDGSE
EMHVFFAMAWFHMESWAWAHYIMEWATQGVFQGERRFWLGAMVDDHFLGT
NPFVYDGESNASDEEERITGEELEGFLSATEALNKLYNAEIVTEFPFNAL
GILEKAETEYTFT
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mRNA from alignment at Ecto-sp13_S_contig14423:3..3717-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig14423.3402.1 ID=mRNA_Ecto-sp13_S_contig14423.3402.1|Name=mRNA_Ecto-sp13_S_contig14423.3402.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3715bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14423:3..3717- (Ectocarpus species13 EcNAP12_S_4_19m)
GAACAGGACGTATCGACGGTCTCGGAAGCGTACCTTTTGAGCGAGCTCTT CAAGGGGTTCTGGGCCGCATCTCAGGTATGTTTCGTATCTGAAGCCCTCA TCGCTCCCAATACATCTATGGGATGCACCGCTGCCATTCAATACCGTAAA AACATTGCTGGTGTATATATCGTAGTTGCTCGAGCGGACCGCCCATACAT TTATATGCAACTACATCTTTCCCACCCCCGTCTTCATAGAGTCTCGCTGT TGTTTCATGAAAAGCGTACAGATGTCGTTTGTGCCGCCACCCTGGCTTAG TACAATGTGCTCCATCGTCCTGTTTGATTTTCACTTCATTCGGCACCCGA CCGCTACTACAGTAGATAAATGCAGACGGCGGAGAGCCTTCGGGCGACAC GCAGTGTCGTTTTTTGTAGACCAGTCTACATGGTATGACAACATGACTAG ACTATGGCATGATGCCCGTCACCGACCATGACAACGGATATGACCCTTCG CAGCACGTCATTATTGACACGGGAGACGGCGACTTCGATCTTCTCAACGA CGGCGATGAGAACCACGGCAAGTGCAGCGCGATCTTTGTCGGGTCCCAGC CTTCGGTCGGGGAGGACGGTGCGACCGGGCAATATGAACAACTGTTGGCG TACTCGGCGAAGTTTCAGGTGGGGAGAGAAACACATGCTCCATGCCGTAG CACACCAGTGTGAAAGATGAACGGAAGTATTCAATAGTCCGACTCTTTTT CGAGATGTTCAACTCCACGTAATTACATGTAGCAGTCAGAGCCAACAACC TAGTTGTGCTGGAATCCATAGTTGTGCTGGCTGCGCTTGAAACTCACTCT TTTGGCTTTCTTCATAGTTGACCCAATACACAAAGACGCACTCGAGGCGA CGGTCGCAGACAAAACGAGGACCACAACTTGACGGGTTTCGGGCAGCATA CTGCTTCGCTGCTGTACCACAACTTCGTCCCCATTTTCAAAATCACGTTT CGCTCTGAAAGAGCTGGGTCCCCGTCCTCCCACCCCCTCTGACCACTTGC TTGCTTGAAAATCATGCAACGTTTGCGTGCCTTTAAGGTCCGTTTGGTGT TCTTTGACAACGCCGAGACGGCCAATTTGGCCACCATCACAACCAAGATC GGGATCCAGCAACACTTCTCGGACGCTTTGCTCGCAGCGGCAAGCATCAG GCTGACAGGTGGCTGTGTTTGGTATTTTGATCGCTGTCTCTGCCCCCTTT CTCCTTCCGCTCTTGTGAATGTATCACTCAATTGCTCGATTATTTGGTGC CCTCTTGAGCTGTTTTGTGGTCACGTAGATTTTTATTGCCCCCGAACGGC CACCATCTTCTCACCGTTCCGTTGTGGGTTCGAAGAGAGAGCATTTCAAG TTCGTGAAGAAAATAGTGTTGGAAAGGGTATGGCTGCCTGCGTTCAAGAT GTACCCTGGATTTTTCGGACGCGAATGATTTTCTTCTGTAACTCTCCTTT GATGGAGTGTTTAGTCTGTTCTTGAAGGAACTTTCGTGTTGGTGGAAATC GCAGGTCATCTTTCCTTCCAGTGGCAAGACCAGCTTGGATGCGGTAGAAA AAGCGAACCTCCAAGTTTCGTAGCTCACGTGGTCTGATTGCGCAACATTT CCCGCGCGCGACACACACCCAACGACAGATTTGGATGCACGAGTGGTGAA CCCAGCGCTTCAAACAGACCCTTCAGATATTTATTTCCGCCCCGTGAGGG TATCGGGGGATCCTACAGGCGGCGAGCGAAACATCGTCGCAGAGTGAGTT ACCGATTAAATACATCCCCACAAATCATGTGGGCGCTGGAAATGCGCCTA TCCCGGGTCTCATTCCTCAGTAACATCGCTTCCCCAAAATTCTAGTCGAG ATGGATCATGCTCTACCATCATCTTTATCACATTTCCCGAACCGAGTCCT CGCCAAGAGTAGACGACGTGAGCATAGAAACGATTGTGCCGCAGCTCCAT CAGGCTCCCCACACCAACTGGTTCTTGGTTTGCTATTGTTTTGTTCGCAC AAAGCGCCTCCCATTTTCGTTCTACGATGTCTCTCTATGCATGAACTGAC CTTGCGTGCTCTCCTCCCTTCGGTACTACCAAACCTCAGCCTCGTCGATA GTGATGGGCAGTCCATCAGCGATACGGACGGTATCTGGGACCCCAACAGT ACTATGGAAACCCCGGGCGCCTCGATAGCCGCGGTTACGTTCAAGGGTGA AGACGGGTCCGAAGAGATGCACGTGTTCTTTGCCATGGCCTGGTTCCACA TGGAGTCGTGGGCGTGGGCGCACTATATCATGGAGTGGGCCACCCAGGGG GTATTCCAGGTGCGTGGAGAACGATTTTTGTGTTTCCTGCTGGTGGCATA TGTACAGTAGTTTCAGAAAACTGTTGACGTGCACCGCCGTTGTGTGTGAG AGGTTTGGAGGAAGCATTGGATCTGCGGGTTTGATGATCACATCTGTCCT TGATTCTCTTCGTGATGCGTGGAGGACATGGTAGCGTCGAACGAGGTCTG CCTTCGTTCCTGACGTTGTTCTTGCATCTGTCTAACCATTAATGTTGCTG TTCCCTCTTTCCTAGGGCGAGCGCCGCTTCTGGCTCGGCGCGATGGTTGA CGACCACTTCCTCGGAACGAATCCTTTCGTGTACGACGGCGAGTCGAATG CGAGCGATGAAGTGAGGAACCCCCGTCATCTTGTTGTTACTGGTCTTCGC TGTGCCGCAATGAATTGTTTAAAGTGCTTGTCACCATCTCCGATCTGATA AAATGCGTTCCAACGACGTGTGACTTCGGGTTGGGGTTTTCACTCACCAC TCTGGTAGACTCGAATCGGATGCTTGTGTGTATGTGAGTGGCACACGGAG GACAATTAAGCGGTGATGAAGCAGCCCAAGCCTGACAAGAACGCTAGGGG CAATGACACCCCTATCGTGTACAACCGTGTCTTTCTCGCCGCAAGTCATC TACTCCGAAGCAGGCCGAGTTTCAGCCATGAGAATGTCTTCTTCGTCGTG TTTTGCATGAACCCTCGTGGGAAGCACGACAACATACCCGTGTGCAAGAT GGTTGCTGGGGTTAAATCTCGTGCTCGAAGTGAGCACCACACGCCTCGTG ACACTTTCCTATTTCATTGCCTATGCGAGGAGGCTTTTCGTAACTACGAC ATAGTGGAGGATGAAAAAAAGATGTGAGGCTCGGCATAAGGAGCGTGTCA CTTCACCCTTTGTTGCGAAATCGGGCGAACGCTCGCAGGAGGAGCGGATC ACGGGCGAGGAGCTCGAGGGTTTCCTCAGTGCTACGGAAGCGCTGAACAA ACTCTACAACGCCGAGATCGTAACCGAGTTCCCCTTCAACGCCCTCGGCA TCCTCGAAAAGGTGACATCTTCATCTCAAGGGATCACACTGGAACGGTCA GAATATTCACATTCTTTTTCGTTCGTTTCAATAAGAATCAGGCAAAACGA ATGAGTGAATGATTTGACAGCCAACATGTCGTAATTTACATTCCTTCTCC TGAAGCGGCAGGAATTACGCTAGCAGCGCCTTGTTTCAAAACGGAATCAT GTTCTGTCTTGTTCCGGACTCCAGCAAGTGAACCTTCACAGATGGCTCGA ATCATTGCCTCGTACTTGCAACTTTCGCCCCGCCGCCAAAGGCGGAAACG GAGTATACGTTCACC
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig14423:3..3717-

>mRNA_Ecto-sp13_S_contig14423.3402.1 ID=mRNA_Ecto-sp13_S_contig14423.3402.1|Name=mRNA_Ecto-sp13_S_contig14423.3402.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=939bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14423:3..3717- (Ectocarpus species13 EcNAP12_S_4_19m)
GAACAGGACGTATCGACGGTCTCGGAAGCGTACCTTTTGAGCGAGCTCTT
CAAGGGGTTCTGGGCCGCATCTCAGCACGTCATTATTGACACGGGAGACG
GCGACTTCGATCTTCTCAACGACGGCGATGAGAACCACGGCAAGTGCAGC
GCGATCTTTGTCGGGTCCCAGCCTTCGGTCGGGGAGGACGGTGCGACCGG
GCAATATGAACAACTGTTGGCGTACTCGGCGAAGTTTCAGGTCCGTTTGG
TGTTCTTTGACAACGCCGAGACGGCCAATTTGGCCACCATCACAACCAAG
ATCGGGATCCAGCAACACTTCTCGGACGCTTTGCTCGCAGCGGCAAGCAT
CAGGCTGACAGATTTGGATGCACGAGTGGTGAACCCAGCGCTTCAAACAG
ACCCTTCAGATATTTATTTCCGCCCCGTGAGGGTATCGGGGGATCCTACA
GGCGGCGAGCGAAACATCGTCGCAGACCTCGTCGATAGTGATGGGCAGTC
CATCAGCGATACGGACGGTATCTGGGACCCCAACAGTACTATGGAAACCC
CGGGCGCCTCGATAGCCGCGGTTACGTTCAAGGGTGAAGACGGGTCCGAA
GAGATGCACGTGTTCTTTGCCATGGCCTGGTTCCACATGGAGTCGTGGGC
GTGGGCGCACTATATCATGGAGTGGGCCACCCAGGGGGTATTCCAGGGCG
AGCGCCGCTTCTGGCTCGGCGCGATGGTTGACGACCACTTCCTCGGAACG
AATCCTTTCGTGTACGACGGCGAGTCGAATGCGAGCGATGAAGAGGAGCG
GATCACGGGCGAGGAGCTCGAGGGTTTCCTCAGTGCTACGGAAGCGCTGA
ACAAACTCTACAACGCCGAGATCGTAACCGAGTTCCCCTTCAACGCCCTC
GGCATCCTCGAAAAGGCGGAAACGGAGTATACGTTCACC
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