mRNA_Ecto-sp13_S_contig14368.3366.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig14368.3366.1
Unique NamemRNA_Ecto-sp13_S_contig14368.3366.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig14368.3366.1 vs. uniprot
Match: A0A6H5K847_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K847_9PHAE)

HSP 1 Score: 300 bits (768), Expect = 1.190e-92
Identity = 180/305 (59.02%), Postives = 221/305 (72.46%), Query Frame = 1
Query:   16 VGRGSIMSSAEAGPAAAGVPAALTKAGACERTVLVGRDKHVVKHTWR*VPGRGVLVVADLVDN*HNNTATQHAIGYVSENITEATVSKKAAELADKFFKNKRERWQKIQQQAXXXXXXSGVRRSADSAVADPVIAALRGDRRTRFGLEMSQPAKQETTVDSHLQKADALLAALDSMDAENALRRLEEVGSQFARETRAQMRELQDKARLGVALELAMKQAQKQGRSTEGRRTLQTLLTAAAFDEDNDGEAPSASGKHRAAALGIHERAFYLAVRRAKELMSDLHPAEAIRTRGVYWFWPKARRND 930
            VGR SIMSSA+AG AAAG+ AA+TK G CERTVL+G+DKHVVK +WR V  RGVLV A LVD+ H N ++Q   GY  +  +E  VS+KA EL DK  KNKRERWQK Q   XXXXXX  VRR+ DSAVADPVI ALRG  RTR  +   QP +    VD   Q A+  LA++DSM  +NAL+ LE++GS FA++TR ++R L+DK    V+LE A++QAQKQ R+ EGRRTLQT+LTAAAF  D   E PS S   RA ALG+ +RAF  AV RAK L+SDLHP EAI+ RGVYWFWP+A++++
Sbjct:  152 VGRASIMSSAQAGRAAAGLAAAVTKPGVCERTVLLGKDKHVVKLSWRLVSERGVLVTATLVDSKHKNRSSQTYSGYAKD--SEEAVSEKAEELTDKVLKNKRERWQKAQXXXXXXXXXXXVRRTEDSAVADPVIMALRGVGRTRPRVVTIQPTEPTAPVDWRQQSAETFLASMDSMGYDNALQHLEKIGSTFAKDTRKRLRGLEDKVSTAVSLERAIEQAQKQRRTNEGRRTLQTILTAAAFPVDGVDEVPSLSAARRAKALGVRQRAFNSAVERAKNLLSDLHPTEAIK-RGVYWFWPRAKQSN 453          
BLAST of mRNA_Ecto-sp13_S_contig14368.3366.1 vs. uniprot
Match: A0A6H5KI10_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KI10_9PHAE)

HSP 1 Score: 282 bits (722), Expect = 1.140e-81
Identity = 172/313 (54.95%), Postives = 216/313 (69.01%), Query Frame = 1
Query:   34 MSSAEAGPAAAGVPAALTKAGACERTVLVGRDKHVVKHTWR*VPGRGVLVVADLVDN*HNNTATQHAIGYVSENITEATVSKKAAELADKFFKNKRERWQKIQQQAXXXXXXSGVRRSADSAVADPVIAALRGDRRTRFGLEMSQPAKQETTVDSHLQKA-DALLAALDSMDAENALRRLEEVGSQFARETRAQMRELQDKARLGVALELAMKQAQKQGRSTEGRRTLQTLLTAAAFDEDNDGEAPSASGKHRAAALGIHERAFYLAVRRAKELMSDLHPAEAIRTRGVYWFWPKARRNDAASEELVRLRVRY 969
            MSSAEAGPAAA   AA+TK+G CER VL+G+D HV+K +W                             YV EN  EA VSK+AAEL DK  KNKRE+WQK QQ++      SGVRR+ADSAVADPVI ALRG  RTR  ++ S+P +QET   +  Q A +  LA++DSM  ENALR L+++GS FA++T  ++REL+ KA   V+LE A++QA KQ R+TEGR TLQT+LTAAAF  D DG APS S + RAA LG+ +RAF  AV RAK+L+SDL+P EAI+ RGVYWFWP+A+R+DAASEEL+ L  +Y
Sbjct:    1 MSSAEAGPAAAEPAAAVTKSGGCERIVLLGKDNHVIKLSWN----------------------------YVKENPEEA-VSKQAAELTDKVLKNKREQWQKAQQRSGGSSRSSGVRRTADSAVADPVITALRGGGRTRSRVQTSEPVEQETEPVNWRQHATETFLASMDSMGHENALRHLKKIGSTFAKDTLVRLRELEAKASTAVSLERAIEQAPKQPRTTEGRHTLQTILTAAAFRVDVDG-APSISARRRAAVLGVQKRAFTFAVERAKKLLSDLNPTEAIK-RGVYWFWPRAKRSDAASEELLELMRQY 282          
BLAST of mRNA_Ecto-sp13_S_contig14368.3366.1 vs. uniprot
Match: A0A6H5LEY9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LEY9_9PHAE)

HSP 1 Score: 249 bits (636), Expect = 3.410e-70
Identity = 148/305 (48.52%), Postives = 198/305 (64.92%), Query Frame = 1
Query:   58 AAAGVPAALTKAGACERTVLVGRDKHVVKHTWR*VPGRG-VLVVADLVDN*HNNTATQHAIGYVSENITEATVSKKAAELADKFFKNKRERWQKIQQQAXXXXXXSGVRRSADSAVADPVIAALRGDRRTRFGLEMSQPAKQETTVDSHLQKADALLAALDSMDAENALRRLEEVGSQFARETRAQMRELQDKARLGVALELAMKQAQKQGRSTEGRRTLQTLLTAAAFDEDNDGEAPSASGKHRAAALGIHERAFYLAVRRAKELMSDLHPAEAIRTRGVYWFWPKARRNDAASEELVRLRVRY 969
            A AG+ A ++K G CER + +G+ +HVV+H WR   G G VL+   LVD  + N ++     YV    TE +++ KA E+A    KNKRE+W+K Q  +       G RR+AD  VADPV+AALRG  RTR  +   QPA+    VD   Q  +  LA++DSM  +NAL+ LEE+ S FA++ R ++REL+DK    V+LE A++QA+KQ R+ EG RTLQT+LTAAA   D   E PS S   RA ALG+ E AF  AV RAK L+S LHP EAI+ RGVYWFWP+A++++AASEEL+ L  +Y
Sbjct:    4 AGAGLAAPVSKPGKCERILWLGKVRHVVRHEWRLHKGSGEVLLTTTLVDKKNPNRSSNKRQVYVEN--TEESITSKALEMARIVLKNKREKWEKAQGHSGGSSSGGGPRRNADREVADPVMAALRGGGRTRSRVVTIQPAEPTAPVDWRQQCTETFLASMDSMGYDNALKHLEEIVSTFAKDARKRLRELEDKVSTAVSLERAIEQARKQRRTKEGSRTLQTILTAAAIPGDGVDEVPSLSAARRAKALGVREHAFNSAVERAKNLLSGLHPTEAIK-RGVYWFWPRAKQSNAASEELLELMRQY 305          
BLAST of mRNA_Ecto-sp13_S_contig14368.3366.1 vs. uniprot
Match: A0A6H5KCJ5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCJ5_9PHAE)

HSP 1 Score: 233 bits (595), Expect = 1.530e-68
Identity = 135/231 (58.44%), Postives = 170/231 (73.59%), Query Frame = 1
Query:  280 KAAELADKFFKNKRERWQKIQQQAXXXXXXSGVRRSADSAVADPVIAALRGDRRTRFGLEMSQPAKQETTVDSHLQKA-DALLAALDSMDAENALRRLEEVGSQFARETRAQMRELQDKARLGVALELAMKQAQKQGRSTEGRRTLQTLLTAAAFDEDNDGEAPSASGKHRAAALGIHERAFYLAVRRAKELMSDLHPAEAIRTRGVYWFWPKARRNDAASEELVRLRVRY 969
            KAAEL DK  K+KRE+WQK QQ++      SGVRR+ADSAVADPVI ALRG  RTR  ++ S+PA+QET   +  Q A +  LA++DSM  ENAL  LE++GS FA++T  ++REL+ KA   V+LE  ++QAQ Q R+ EGR TLQT+LTAAAF  D DG APS S + RAA LG+ ERAF  A  RAK+L+SDLHP E I+ RGVYWFWP+A+R+DAASEEL+ L  +Y
Sbjct:   12 KAAELTDKVLKHKREQWQKAQQRSGGSSRSSGVRRTADSAVADPVITALRGGGRTRSRVQTSEPAEQETAPVNWRQHATETFLASMDSMGYENALLHLEKIGSTFAKDTLVRLRELEAKASTAVSLERVIEQAQMQRRTIEGRHTLQTILTAAAFPVDVDG-APSISARRRAAVLGVQERAFTFAAERAKKLLSDLHPTEVIK-RGVYWFWPRAKRSDAASEELLELMRQY 240          
BLAST of mRNA_Ecto-sp13_S_contig14368.3366.1 vs. uniprot
Match: A0A6H5KHT7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHT7_9PHAE)

HSP 1 Score: 243 bits (619), Expect = 2.030e-68
Identity = 147/314 (46.82%), Postives = 199/314 (63.38%), Query Frame = 1
Query:   34 MSSAEAGPAAAGVPAALTKAGACERTVLVGRDKHVVKHTWR*VPGRG-VLVVADLVDN*HNNTATQHAIGYVSENITEATVSKKAAELADKFFKNKRERWQKIQ-QQAXXXXXXSGVRRSADSAVADPVIAALRGDRRTRFGLEMSQPAKQETTVDSHLQKADALLAALDSMDAENALRRLEEVGSQFARETRAQMRELQDKARLGVALELAMKQAQKQGRSTEGRRTLQTLLTAAAFDEDNDGEAPSASGKHRAAALGIHERAFYLAVRRAKELMSDLHPAEAIRTRGVYWFWPKARRNDAASEELVRLRVRY 969
            MS+AEAGPAAA     ++K G CE  +L+G   HV++H WR    RG VL++  LVD    N ++     +V+   TE  V+ KA E+A +  KNKRERW+K   +         G RR+AD  VAD  +AALRG  RTR G  +S+PA+     D   Q  +  +A++DSM  + AL  LE  GS+FA+ETR ++REL+ K    V+LE A++QAQ+Q R+ EG RT QT+LTAAAF  D+    PS S + RAAAL + E+AF  A  RAK+L+SDL P EAI+  GVYWFWP+A++ +AASEEL+ L  +Y
Sbjct:    1 MSAAEAGPAAA-----VSKPGKCEHMLLLGNQTHVIQHEWRPDKSRGEVLLITTLVDKKSPNRSSNKQQVFVAN--TEERVASKALEMAHRLLKNKRERWEKAHGRSGGSRSSGGGARRNADREVADLFMAALRGCGRTRSGSTISEPAEPTAPADWRQQSTETFIASMDSMGYDKALHHLEGTGSKFAKETRVRLRELEAKVSTAVSLERALEQAQRQRRTKEGSRTFQTILTAAAFPVDDVDGTPSVSARRRAAALDVREQAFNFAAERAKKLLSDLQPTEAIK-HGVYWFWPRAKQGNAASEELLELMRQY 306          
BLAST of mRNA_Ecto-sp13_S_contig14368.3366.1 vs. uniprot
Match: A0A6H5JDR7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDR7_9PHAE)

HSP 1 Score: 209 bits (533), Expect = 9.370e-61
Identity = 101/147 (68.71%), Postives = 119/147 (80.95%), Query Frame = 2
Query:  962 LDTVASRWESEGAQAQDPVPEEEEVTCRKLKRTYNLKTRSASCFCSACQRSEYEQCFVSKTYPGVVPPMQDGQVKETVVMDTGVAPEGGAGSEGIVFPSTKKECAMQRITGTQWEEFESERASKIWEDLGREEEPSIVALFGRWAGF 1402
            L  VASRW+ +GA  QDPV  EE+VTCRK+KRTY L++R ASCFCSACQR EYEQC VSKTYP +VP +Q+G+VKETV+MDTGVAP     S GI F S +KEC M+RIT T+W+E+ES  ASKIWE+LGR+EEP IVA FGRWAGF
Sbjct:   93 LGAVASRWKGKGAGLQDPVSGEEDVTCRKVKRTYRLRSRLASCFCSACQRCEYEQCDVSKTYPRLVPALQEGEVKETVIMDTGVAPVDEDNSRGIQFGSRRKECKMKRITETRWQEYESAAASKIWEELGRKEEPHIVARFGRWAGF 239          
BLAST of mRNA_Ecto-sp13_S_contig14368.3366.1 vs. uniprot
Match: A0A6H5KLE4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLE4_9PHAE)

HSP 1 Score: 209 bits (531), Expect = 3.770e-60
Identity = 100/147 (68.03%), Postives = 117/147 (79.59%), Query Frame = 2
Query:  962 LDTVASRWESEGAQAQDPVPEEEEVTCRKLKRTYNLKTRSASCFCSACQRSEYEQCFVSKTYPGVVPPMQDGQVKETVVMDTGVAPEGGAGSEGIVFPSTKKECAMQRITGTQWEEFESERASKIWEDLGREEEPSIVALFGRWAGF 1402
            L  VASRW+ +GA+   PV  EE+VTCRK+KRTY L+TR ASCFCSACQR EYEQC+VSKTYP +VP +Q G+VKETV+MDTGVAP     S GI F S +KEC M+RITGT W+E ES  ASKIWE+LGR+EEP+I A FGRWAGF
Sbjct:  116 LGAVASRWKGKGAELHHPVSGEEDVTCRKVKRTYRLRTRLASCFCSACQRCEYEQCYVSKTYPRLVPALQKGEVKETVIMDTGVAPVDEDNSRGIQFGSRRKECKMKRITGTHWQECESAAASKIWEELGRKEEPNIFARFGRWAGF 262          
BLAST of mRNA_Ecto-sp13_S_contig14368.3366.1 vs. uniprot
Match: A0A6H5JA27_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JA27_9PHAE)

HSP 1 Score: 207 bits (526), Expect = 1.910e-58
Identity = 101/148 (68.24%), Postives = 118/148 (79.73%), Query Frame = 2
Query:  959 GLDTVASRWESEGAQAQDPVPEEEEVTCRKLKRTYNLKTRSASCFCSACQRSEYEQCFVSKTYPGVVPPMQDGQVKETVVMDTGVAPEGGAGSEGIVFPSTKKECAMQRITGTQWEEFESERASKIWEDLGREEEPSIVALFGRWAGF 1402
            G   VASRW+ +GA  QDPVP EE+VTCRK+KRTY L+TR ASCFCSACQR EYEQC+VSKTYP +VP +Q+G+VKETV+ DTGVAP     S GI F S +KEC M+RITGTQ +E ES  ASKIWE+ GR+EEP+I A FGRWAGF
Sbjct:  191 GGGAVASRWKGKGAGLQDPVPGEEDVTCRKVKRTYRLRTRLASCFCSACQRCEYEQCYVSKTYPRLVPALQEGEVKETVITDTGVAPLDEDNSRGIQFGSRRKECKMKRITGTQLQECESAAASKIWEERGRKEEPNIFARFGRWAGF 338          
BLAST of mRNA_Ecto-sp13_S_contig14368.3366.1 vs. uniprot
Match: A0A6H5JQZ3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQZ3_9PHAE)

HSP 1 Score: 202 bits (515), Expect = 4.030e-56
Identity = 130/313 (41.53%), Postives = 182/313 (58.15%), Query Frame = 1
Query:   34 MSSAEAGPAAAGVPAALTKAGACERTVLVGRDKHVVKHTWR*VPGRGVLVVADLVDN*HNNTATQHAIGYVSENITEATVSKKAAELADKFFKNKRERWQKIQ-QQAXXXXXXSGVRRSADSAVADPVIAALRGDRRTRFGLEMSQPAKQETTVDSHLQKADALLAALDSMDAENALRRLEEVGSQFARETRAQMRELQDKARLGVALELAMKQAQKQGRSTEGRRTLQTLLTAAAFDEDNDGEAPSASGKHRAAALGIHERAFYLAVRRAKELMSDLHPAEAIRTRGVYWFWPKARRNDAASEELVRLRVRY 969
            MS+AE GPAAA     ++K G CER + +G             P   VL++  LVD    N ++                        +K  KNKRERW+K + +         G + +AD  VADPV+AA RG  RTR+G+ +S+PA+     D   Q  +  +A++DSM    AL  LE  GS+FA+ETR ++REL+ K    V+LE A++QAQ+Q R+ EG  T QT+LTAA++  D+   APS S + RAAALG+ E+AF  A  RAK+L+SDL P EAI+ RGVYWFW +A++++A SEEL+ L  +Y
Sbjct:    1 MSAAEVGPAAA-----VSKPGKCERILWLGNQ-----------PRGEVLLITTLVDKKSPNRSS------------------------NKLLKNKRERWEKARGRSGGSSSSGGGAKTNADREVADPVMAAFRGCGRTRYGVTISEPAEPTAPADWRQQSTETFVASMDSMGYNKALHHLEGTGSKFAKETRVRVRELEAKVSTAVSLERALEQAQRQRRTKEGSHTFQTILTAASYPVDDVDGAPSVSARRRAAALGVREQAFNFAAERAKKLLSDLQPTEAIK-RGVYWFWVRAKQSNAPSEELLELMRQY 272          
BLAST of mRNA_Ecto-sp13_S_contig14368.3366.1 vs. uniprot
Match: A0A6H5JQK7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQK7_9PHAE)

HSP 1 Score: 199 bits (507), Expect = 6.010e-55
Identity = 95/145 (65.52%), Postives = 115/145 (79.31%), Query Frame = 2
Query:  962 LDTVASRWESEGAQAQDPVPEEEEVTCRKLKRTYNLKTRSASCFCSACQRSEYEQCFVSKTYPGVVPPMQDGQVKETVVMDTGVAPEGGAGSEGIVFPSTKKECAMQRITGTQWEEFESERASKIWEDLGREEEPSIVALFGRWA 1396
            LD VASRW+ EGA+ QDP+  EE++TCRK+KRT +L+TR ASCFCS C+RSEYEQC+VSKT+P +VP M+DG VKETV+M TGVAP     SEGI FP  KKEC  +R TGTQW++  S  ASKIWE+LGR+EEPS  + FGRWA
Sbjct:  236 LDAVASRWKGEGAKLQDPISGEEDMTCRKVKRTCSLRTRLASCFCSVCRRSEYEQCYVSKTFPRLVPVMEDGVVKETVIMGTGVAPVDEDASEGIKFPRYKKECKKKRTTGTQWQDGGSATASKIWEELGRKEEPSTFSSFGRWA 380          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14368.3366.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K847_9PHAE1.190e-9259.02Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KI10_9PHAE1.140e-8154.95Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5LEY9_9PHAE3.410e-7048.52Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KCJ5_9PHAE1.530e-6858.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KHT7_9PHAE2.030e-6846.82Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JDR7_9PHAE9.370e-6168.71Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KLE4_9PHAE3.770e-6068.03Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JA27_9PHAE1.910e-5868.24Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JQZ3_9PHAE4.030e-5641.53Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JQK7_9PHAE6.010e-5565.52Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig14368contigEcto-sp13_S_contig14368:2091..4115 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Model size1635
Hectar predicted targeting categoryother localisation
Exons2
Cds size534
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462767.1576397-UTR-Ecto-sp13_S_contig14368:2090..25491681462767.1576397-UTR-Ecto-sp13_S_contig14368:2090..2549Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig14368 2091..2549 +
1681462767.1936781-UTR-Ecto-sp13_S_contig14368:3473..41151681462767.1936781-UTR-Ecto-sp13_S_contig14368:3473..4115Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig14368 3474..4115 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462767.1710672-CDS-Ecto-sp13_S_contig14368:2549..25731681462767.1710672-CDS-Ecto-sp13_S_contig14368:2549..2573Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14368 2550..2573 +
1681462767.1814773-CDS-Ecto-sp13_S_contig14368:2963..34731681462767.1814773-CDS-Ecto-sp13_S_contig14368:2963..3473Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14368 2964..3473 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig14368.3366.1prot_Ecto-sp13_S_contig14368.3366.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig14368 2550..3473 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig14368.3366.1

>prot_Ecto-sp13_S_contig14368.3366.1 ID=prot_Ecto-sp13_S_contig14368.3366.1|Name=mRNA_Ecto-sp13_S_contig14368.3366.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=178bp
MSQPAKQETTVDSHLQKADALLAALDSMDAENALRRLEEVGSQFARETRA
QMRELQDKARLGVALELAMKQAQKQGRSTEGRRTLQTLLTAAAFDEDNDG
EAPSASGKHRAAALGIHERAFYLAVRRAKELMSDLHPAEAIRTRGVYWFW
PKARRNDAASEELVRLRVRYSGKQMGE*
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mRNA from alignment at Ecto-sp13_S_contig14368:2091..4115+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig14368.3366.1 ID=mRNA_Ecto-sp13_S_contig14368.3366.1|Name=mRNA_Ecto-sp13_S_contig14368.3366.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2025bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14368:2091..4115+ (Ectocarpus species13 EcNAP12_S_4_19m)
CAGACTTAAACCCACGTGGGCAGAGGCTCGATCATGAGCTCAGCCGAAGC TGGGCCAGCGGCAGCTGGCGTGCCGGCGGCTTTGACCAAGGCAGGAGCAT GTGAACGCACAGTGTTGGTTGGAAGAGACAAACATGTCGTAAAGCACACC TGGCGGTAAGTCCCCGGCCGCGGCGTGCTGGTGGTCGCCGATCTCGTCGA TAACTAGCACAATAATACGGCCACACAGCACGCAATTGGCTACGTTTCGG AGAACATCACCGAAGCAACGGTCAGCAAAAAAGCCGCGGAGCTGGCTGAC AAGTTCTTCAAGAACAAGCGCGAGAGGTGGCAGAAGATACAGCAGCAGGC TGGAGGCGGCAGCAGCAGCAGCGGCGTCAGGAGGAGCGCAGATAGCGCTG TAGCCGACCCTGTAATCGCGGCTTTGAGGGGTGATCGAAGAACCAGATTT GGGTTGGAGATGAGCCAGCCAGCAAAGCAAGAGGTGAGACATTAAGCAAG CGCAGGATGCATGCCACCAACAATCAGGAGCGAATCAATAATTGTGCCGA AGTTTCGAGTCTCCCAACGAAAAAGCCGCAGACCCGTAGATAAGCCGAGC AATAAACAATCAAGATGCGTAATTTCGCCGAGAGGTTTCAAAATCCACCG AGAAGAGACCGTGCATGCTAAATTTCACCGAGAAGATGCCTGAGTGCACA AAGAGCGCGGTAACGGTTCGGGAAGTGCCCCTCTGTGCTGATTCCGCAGC TTTAGTAGCCACTACCCTACGAAAAAAATGATGCACGCAATTGCTGCTCT GTCAGTCGCCTCCTGTGCTTATGTCTCGGTGCACATTGCCCCCACCCCCT TGGTCCGTCGCGTGTTCACACAGACGACCGTCGACTCGCACCTTCAGAAG GCGGACGCGCTCCTCGCTGCCTTGGACAGCATGGACGCAGAGAACGCGCT GCGTCGCTTGGAAGAGGTCGGCTCGCAGTTCGCGAGGGAGACACGTGCTC AAATGCGAGAGTTGCAAGACAAGGCCCGTCTAGGAGTCGCACTTGAGCTG GCCATGAAGCAGGCGCAGAAGCAAGGGAGATCCACGGAGGGAAGACGAAC GTTGCAAACGCTTCTCACCGCCGCGGCCTTTGATGAGGACAACGACGGGG AGGCTCCCTCGGCATCGGGTAAACATAGGGCAGCGGCCCTGGGGATCCAC GAACGCGCGTTCTACTTGGCGGTTAGACGTGCAAAGGAGCTGATGTCCGA TCTCCACCCAGCCGAAGCGATCAGGACGAGGGGTGTCTACTGGTTCTGGC CGAAAGCTAGGAGGAATGATGCCGCAAGCGAGGAGCTGGTCAGGCTTAGG GTTAGATACAGTGGCAAGCAGATGGGAGAGTGAGGGCGCTCAGGCGCAGG ACCCAGTACCAGAAGAAGAGGAGGTGACTTGTAGGAAGTTGAAACGGACG TACAACCTCAAGACCCGTTCGGCGTCTTGCTTTTGCTCGGCGTGCCAGCG TTCTGAGTACGAGCAGTGCTTCGTCAGCAAGACGTACCCAGGTGTTGTTC CCCCAATGCAGGACGGTCAAGTAAAGGAAACAGTGGTCATGGACACTGGA GTAGCACCAGAAGGCGGAGCTGGCTCGGAGGGGATCGTGTTTCCGTCCAC AAAGAAGGAGTGTGCGATGCAGAGAATTACGGGGACACAGTGGGAGGAGT TTGAGTCTGAGCGTGCTTCAAAGATTTGGGAGGATCTTGGAAGGGAGGAA GAGCCCAGCATTGTTGCCCTTTTCGGGAGGTGGGCTGGCTTTTAAAGTGC GGCGCTTCGTACGTTGAGTGAAGGGAGCAGTGGTGGGCTTCATAGTCCGT TTGAGGTGAAACTTGGGGGGTGGGATGGGCGTTGGTACCAGAGATGAAGG GTAAATGTTGAAAATTTTCGATTTTTTTCGCGGGCAATGCCGTCAAGGAT ATGCCTGTATCTCAGTAGCAAAAAAAAAATCTGACCACGGATTCGTAATC CCCACCCCAAAATTACCCTGACCCG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig14368:2091..4115+

>mRNA_Ecto-sp13_S_contig14368.3366.1 ID=mRNA_Ecto-sp13_S_contig14368.3366.1|Name=mRNA_Ecto-sp13_S_contig14368.3366.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=534bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14368:2091..4115+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGAGCCAGCCAGCAAAGCAAGAGACGACCGTCGACTCGCACCTTCAGAA
GGCGGACGCGCTCCTCGCTGCCTTGGACAGCATGGACGCAGAGAACGCGC
TGCGTCGCTTGGAAGAGGTCGGCTCGCAGTTCGCGAGGGAGACACGTGCT
CAAATGCGAGAGTTGCAAGACAAGGCCCGTCTAGGAGTCGCACTTGAGCT
GGCCATGAAGCAGGCGCAGAAGCAAGGGAGATCCACGGAGGGAAGACGAA
CGTTGCAAACGCTTCTCACCGCCGCGGCCTTTGATGAGGACAACGACGGG
GAGGCTCCCTCGGCATCGGGTAAACATAGGGCAGCGGCCCTGGGGATCCA
CGAACGCGCGTTCTACTTGGCGGTTAGACGTGCAAAGGAGCTGATGTCCG
ATCTCCACCCAGCCGAAGCGATCAGGACGAGGGGTGTCTACTGGTTCTGG
CCGAAAGCTAGGAGGAATGATGCCGCAAGCGAGGAGCTGGTCAGGCTTAG
GGTTAGATACAGTGGCAAGCAGATGGGAGAGTGA
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