mRNA_Ecto-sp13_S_contig14368.3366.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig14368.3366.1 vs. uniprot
Match: A0A6H5K847_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K847_9PHAE) HSP 1 Score: 300 bits (768), Expect = 1.190e-92 Identity = 180/305 (59.02%), Postives = 221/305 (72.46%), Query Frame = 1
Query: 16 VGRGSIMSSAEAGPAAAGVPAALTKAGACERTVLVGRDKHVVKHTWR*VPGRGVLVVADLVDN*HNNTATQHAIGYVSENITEATVSKKAAELADKFFKNKRERWQKIQQQAXXXXXXSGVRRSADSAVADPVIAALRGDRRTRFGLEMSQPAKQETTVDSHLQKADALLAALDSMDAENALRRLEEVGSQFARETRAQMRELQDKARLGVALELAMKQAQKQGRSTEGRRTLQTLLTAAAFDEDNDGEAPSASGKHRAAALGIHERAFYLAVRRAKELMSDLHPAEAIRTRGVYWFWPKARRND 930
VGR SIMSSA+AG AAAG+ AA+TK G CERTVL+G+DKHVVK +WR V RGVLV A LVD+ H N ++Q GY + +E VS+KA EL DK KNKRERWQK Q XXXXXX VRR+ DSAVADPVI ALRG RTR + QP + VD Q A+ LA++DSM +NAL+ LE++GS FA++TR ++R L+DK V+LE A++QAQKQ R+ EGRRTLQT+LTAAAF D E PS S RA ALG+ +RAF AV RAK L+SDLHP EAI+ RGVYWFWP+A++++
Sbjct: 152 VGRASIMSSAQAGRAAAGLAAAVTKPGVCERTVLLGKDKHVVKLSWRLVSERGVLVTATLVDSKHKNRSSQTYSGYAKD--SEEAVSEKAEELTDKVLKNKRERWQKAQXXXXXXXXXXXVRRTEDSAVADPVIMALRGVGRTRPRVVTIQPTEPTAPVDWRQQSAETFLASMDSMGYDNALQHLEKIGSTFAKDTRKRLRGLEDKVSTAVSLERAIEQAQKQRRTNEGRRTLQTILTAAAFPVDGVDEVPSLSAARRAKALGVRQRAFNSAVERAKNLLSDLHPTEAIK-RGVYWFWPRAKQSN 453
BLAST of mRNA_Ecto-sp13_S_contig14368.3366.1 vs. uniprot
Match: A0A6H5KI10_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KI10_9PHAE) HSP 1 Score: 282 bits (722), Expect = 1.140e-81 Identity = 172/313 (54.95%), Postives = 216/313 (69.01%), Query Frame = 1
Query: 34 MSSAEAGPAAAGVPAALTKAGACERTVLVGRDKHVVKHTWR*VPGRGVLVVADLVDN*HNNTATQHAIGYVSENITEATVSKKAAELADKFFKNKRERWQKIQQQAXXXXXXSGVRRSADSAVADPVIAALRGDRRTRFGLEMSQPAKQETTVDSHLQKA-DALLAALDSMDAENALRRLEEVGSQFARETRAQMRELQDKARLGVALELAMKQAQKQGRSTEGRRTLQTLLTAAAFDEDNDGEAPSASGKHRAAALGIHERAFYLAVRRAKELMSDLHPAEAIRTRGVYWFWPKARRNDAASEELVRLRVRY 969
MSSAEAGPAAA AA+TK+G CER VL+G+D HV+K +W YV EN EA VSK+AAEL DK KNKRE+WQK QQ++ SGVRR+ADSAVADPVI ALRG RTR ++ S+P +QET + Q A + LA++DSM ENALR L+++GS FA++T ++REL+ KA V+LE A++QA KQ R+TEGR TLQT+LTAAAF D DG APS S + RAA LG+ +RAF AV RAK+L+SDL+P EAI+ RGVYWFWP+A+R+DAASEEL+ L +Y
Sbjct: 1 MSSAEAGPAAAEPAAAVTKSGGCERIVLLGKDNHVIKLSWN----------------------------YVKENPEEA-VSKQAAELTDKVLKNKREQWQKAQQRSGGSSRSSGVRRTADSAVADPVITALRGGGRTRSRVQTSEPVEQETEPVNWRQHATETFLASMDSMGHENALRHLKKIGSTFAKDTLVRLRELEAKASTAVSLERAIEQAPKQPRTTEGRHTLQTILTAAAFRVDVDG-APSISARRRAAVLGVQKRAFTFAVERAKKLLSDLNPTEAIK-RGVYWFWPRAKRSDAASEELLELMRQY 282
BLAST of mRNA_Ecto-sp13_S_contig14368.3366.1 vs. uniprot
Match: A0A6H5LEY9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LEY9_9PHAE) HSP 1 Score: 249 bits (636), Expect = 3.410e-70 Identity = 148/305 (48.52%), Postives = 198/305 (64.92%), Query Frame = 1
Query: 58 AAAGVPAALTKAGACERTVLVGRDKHVVKHTWR*VPGRG-VLVVADLVDN*HNNTATQHAIGYVSENITEATVSKKAAELADKFFKNKRERWQKIQQQAXXXXXXSGVRRSADSAVADPVIAALRGDRRTRFGLEMSQPAKQETTVDSHLQKADALLAALDSMDAENALRRLEEVGSQFARETRAQMRELQDKARLGVALELAMKQAQKQGRSTEGRRTLQTLLTAAAFDEDNDGEAPSASGKHRAAALGIHERAFYLAVRRAKELMSDLHPAEAIRTRGVYWFWPKARRNDAASEELVRLRVRY 969
A AG+ A ++K G CER + +G+ +HVV+H WR G G VL+ LVD + N ++ YV TE +++ KA E+A KNKRE+W+K Q + G RR+AD VADPV+AALRG RTR + QPA+ VD Q + LA++DSM +NAL+ LEE+ S FA++ R ++REL+DK V+LE A++QA+KQ R+ EG RTLQT+LTAAA D E PS S RA ALG+ E AF AV RAK L+S LHP EAI+ RGVYWFWP+A++++AASEEL+ L +Y
Sbjct: 4 AGAGLAAPVSKPGKCERILWLGKVRHVVRHEWRLHKGSGEVLLTTTLVDKKNPNRSSNKRQVYVEN--TEESITSKALEMARIVLKNKREKWEKAQGHSGGSSSGGGPRRNADREVADPVMAALRGGGRTRSRVVTIQPAEPTAPVDWRQQCTETFLASMDSMGYDNALKHLEEIVSTFAKDARKRLRELEDKVSTAVSLERAIEQARKQRRTKEGSRTLQTILTAAAIPGDGVDEVPSLSAARRAKALGVREHAFNSAVERAKNLLSGLHPTEAIK-RGVYWFWPRAKQSNAASEELLELMRQY 305
BLAST of mRNA_Ecto-sp13_S_contig14368.3366.1 vs. uniprot
Match: A0A6H5KCJ5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCJ5_9PHAE) HSP 1 Score: 233 bits (595), Expect = 1.530e-68 Identity = 135/231 (58.44%), Postives = 170/231 (73.59%), Query Frame = 1
Query: 280 KAAELADKFFKNKRERWQKIQQQAXXXXXXSGVRRSADSAVADPVIAALRGDRRTRFGLEMSQPAKQETTVDSHLQKA-DALLAALDSMDAENALRRLEEVGSQFARETRAQMRELQDKARLGVALELAMKQAQKQGRSTEGRRTLQTLLTAAAFDEDNDGEAPSASGKHRAAALGIHERAFYLAVRRAKELMSDLHPAEAIRTRGVYWFWPKARRNDAASEELVRLRVRY 969
KAAEL DK K+KRE+WQK QQ++ SGVRR+ADSAVADPVI ALRG RTR ++ S+PA+QET + Q A + LA++DSM ENAL LE++GS FA++T ++REL+ KA V+LE ++QAQ Q R+ EGR TLQT+LTAAAF D DG APS S + RAA LG+ ERAF A RAK+L+SDLHP E I+ RGVYWFWP+A+R+DAASEEL+ L +Y
Sbjct: 12 KAAELTDKVLKHKREQWQKAQQRSGGSSRSSGVRRTADSAVADPVITALRGGGRTRSRVQTSEPAEQETAPVNWRQHATETFLASMDSMGYENALLHLEKIGSTFAKDTLVRLRELEAKASTAVSLERVIEQAQMQRRTIEGRHTLQTILTAAAFPVDVDG-APSISARRRAAVLGVQERAFTFAAERAKKLLSDLHPTEVIK-RGVYWFWPRAKRSDAASEELLELMRQY 240
BLAST of mRNA_Ecto-sp13_S_contig14368.3366.1 vs. uniprot
Match: A0A6H5KHT7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHT7_9PHAE) HSP 1 Score: 243 bits (619), Expect = 2.030e-68 Identity = 147/314 (46.82%), Postives = 199/314 (63.38%), Query Frame = 1
Query: 34 MSSAEAGPAAAGVPAALTKAGACERTVLVGRDKHVVKHTWR*VPGRG-VLVVADLVDN*HNNTATQHAIGYVSENITEATVSKKAAELADKFFKNKRERWQKIQ-QQAXXXXXXSGVRRSADSAVADPVIAALRGDRRTRFGLEMSQPAKQETTVDSHLQKADALLAALDSMDAENALRRLEEVGSQFARETRAQMRELQDKARLGVALELAMKQAQKQGRSTEGRRTLQTLLTAAAFDEDNDGEAPSASGKHRAAALGIHERAFYLAVRRAKELMSDLHPAEAIRTRGVYWFWPKARRNDAASEELVRLRVRY 969
MS+AEAGPAAA ++K G CE +L+G HV++H WR RG VL++ LVD N ++ +V+ TE V+ KA E+A + KNKRERW+K + G RR+AD VAD +AALRG RTR G +S+PA+ D Q + +A++DSM + AL LE GS+FA+ETR ++REL+ K V+LE A++QAQ+Q R+ EG RT QT+LTAAAF D+ PS S + RAAAL + E+AF A RAK+L+SDL P EAI+ GVYWFWP+A++ +AASEEL+ L +Y
Sbjct: 1 MSAAEAGPAAA-----VSKPGKCEHMLLLGNQTHVIQHEWRPDKSRGEVLLITTLVDKKSPNRSSNKQQVFVAN--TEERVASKALEMAHRLLKNKRERWEKAHGRSGGSRSSGGGARRNADREVADLFMAALRGCGRTRSGSTISEPAEPTAPADWRQQSTETFIASMDSMGYDKALHHLEGTGSKFAKETRVRLRELEAKVSTAVSLERALEQAQRQRRTKEGSRTFQTILTAAAFPVDDVDGTPSVSARRRAAALDVREQAFNFAAERAKKLLSDLQPTEAIK-HGVYWFWPRAKQGNAASEELLELMRQY 306
BLAST of mRNA_Ecto-sp13_S_contig14368.3366.1 vs. uniprot
Match: A0A6H5JDR7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDR7_9PHAE) HSP 1 Score: 209 bits (533), Expect = 9.370e-61 Identity = 101/147 (68.71%), Postives = 119/147 (80.95%), Query Frame = 2
Query: 962 LDTVASRWESEGAQAQDPVPEEEEVTCRKLKRTYNLKTRSASCFCSACQRSEYEQCFVSKTYPGVVPPMQDGQVKETVVMDTGVAPEGGAGSEGIVFPSTKKECAMQRITGTQWEEFESERASKIWEDLGREEEPSIVALFGRWAGF 1402
L VASRW+ +GA QDPV EE+VTCRK+KRTY L++R ASCFCSACQR EYEQC VSKTYP +VP +Q+G+VKETV+MDTGVAP S GI F S +KEC M+RIT T+W+E+ES ASKIWE+LGR+EEP IVA FGRWAGF
Sbjct: 93 LGAVASRWKGKGAGLQDPVSGEEDVTCRKVKRTYRLRSRLASCFCSACQRCEYEQCDVSKTYPRLVPALQEGEVKETVIMDTGVAPVDEDNSRGIQFGSRRKECKMKRITETRWQEYESAAASKIWEELGRKEEPHIVARFGRWAGF 239
BLAST of mRNA_Ecto-sp13_S_contig14368.3366.1 vs. uniprot
Match: A0A6H5KLE4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLE4_9PHAE) HSP 1 Score: 209 bits (531), Expect = 3.770e-60 Identity = 100/147 (68.03%), Postives = 117/147 (79.59%), Query Frame = 2
Query: 962 LDTVASRWESEGAQAQDPVPEEEEVTCRKLKRTYNLKTRSASCFCSACQRSEYEQCFVSKTYPGVVPPMQDGQVKETVVMDTGVAPEGGAGSEGIVFPSTKKECAMQRITGTQWEEFESERASKIWEDLGREEEPSIVALFGRWAGF 1402
L VASRW+ +GA+ PV EE+VTCRK+KRTY L+TR ASCFCSACQR EYEQC+VSKTYP +VP +Q G+VKETV+MDTGVAP S GI F S +KEC M+RITGT W+E ES ASKIWE+LGR+EEP+I A FGRWAGF
Sbjct: 116 LGAVASRWKGKGAELHHPVSGEEDVTCRKVKRTYRLRTRLASCFCSACQRCEYEQCYVSKTYPRLVPALQKGEVKETVIMDTGVAPVDEDNSRGIQFGSRRKECKMKRITGTHWQECESAAASKIWEELGRKEEPNIFARFGRWAGF 262
BLAST of mRNA_Ecto-sp13_S_contig14368.3366.1 vs. uniprot
Match: A0A6H5JA27_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JA27_9PHAE) HSP 1 Score: 207 bits (526), Expect = 1.910e-58 Identity = 101/148 (68.24%), Postives = 118/148 (79.73%), Query Frame = 2
Query: 959 GLDTVASRWESEGAQAQDPVPEEEEVTCRKLKRTYNLKTRSASCFCSACQRSEYEQCFVSKTYPGVVPPMQDGQVKETVVMDTGVAPEGGAGSEGIVFPSTKKECAMQRITGTQWEEFESERASKIWEDLGREEEPSIVALFGRWAGF 1402
G VASRW+ +GA QDPVP EE+VTCRK+KRTY L+TR ASCFCSACQR EYEQC+VSKTYP +VP +Q+G+VKETV+ DTGVAP S GI F S +KEC M+RITGTQ +E ES ASKIWE+ GR+EEP+I A FGRWAGF
Sbjct: 191 GGGAVASRWKGKGAGLQDPVPGEEDVTCRKVKRTYRLRTRLASCFCSACQRCEYEQCYVSKTYPRLVPALQEGEVKETVITDTGVAPLDEDNSRGIQFGSRRKECKMKRITGTQLQECESAAASKIWEERGRKEEPNIFARFGRWAGF 338
BLAST of mRNA_Ecto-sp13_S_contig14368.3366.1 vs. uniprot
Match: A0A6H5JQZ3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQZ3_9PHAE) HSP 1 Score: 202 bits (515), Expect = 4.030e-56 Identity = 130/313 (41.53%), Postives = 182/313 (58.15%), Query Frame = 1
Query: 34 MSSAEAGPAAAGVPAALTKAGACERTVLVGRDKHVVKHTWR*VPGRGVLVVADLVDN*HNNTATQHAIGYVSENITEATVSKKAAELADKFFKNKRERWQKIQ-QQAXXXXXXSGVRRSADSAVADPVIAALRGDRRTRFGLEMSQPAKQETTVDSHLQKADALLAALDSMDAENALRRLEEVGSQFARETRAQMRELQDKARLGVALELAMKQAQKQGRSTEGRRTLQTLLTAAAFDEDNDGEAPSASGKHRAAALGIHERAFYLAVRRAKELMSDLHPAEAIRTRGVYWFWPKARRNDAASEELVRLRVRY 969
MS+AE GPAAA ++K G CER + +G P VL++ LVD N ++ +K KNKRERW+K + + G + +AD VADPV+AA RG RTR+G+ +S+PA+ D Q + +A++DSM AL LE GS+FA+ETR ++REL+ K V+LE A++QAQ+Q R+ EG T QT+LTAA++ D+ APS S + RAAALG+ E+AF A RAK+L+SDL P EAI+ RGVYWFW +A++++A SEEL+ L +Y
Sbjct: 1 MSAAEVGPAAA-----VSKPGKCERILWLGNQ-----------PRGEVLLITTLVDKKSPNRSS------------------------NKLLKNKRERWEKARGRSGGSSSSGGGAKTNADREVADPVMAAFRGCGRTRYGVTISEPAEPTAPADWRQQSTETFVASMDSMGYNKALHHLEGTGSKFAKETRVRVRELEAKVSTAVSLERALEQAQRQRRTKEGSHTFQTILTAASYPVDDVDGAPSVSARRRAAALGVREQAFNFAAERAKKLLSDLQPTEAIK-RGVYWFWVRAKQSNAPSEELLELMRQY 272
BLAST of mRNA_Ecto-sp13_S_contig14368.3366.1 vs. uniprot
Match: A0A6H5JQK7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQK7_9PHAE) HSP 1 Score: 199 bits (507), Expect = 6.010e-55 Identity = 95/145 (65.52%), Postives = 115/145 (79.31%), Query Frame = 2
Query: 962 LDTVASRWESEGAQAQDPVPEEEEVTCRKLKRTYNLKTRSASCFCSACQRSEYEQCFVSKTYPGVVPPMQDGQVKETVVMDTGVAPEGGAGSEGIVFPSTKKECAMQRITGTQWEEFESERASKIWEDLGREEEPSIVALFGRWA 1396
LD VASRW+ EGA+ QDP+ EE++TCRK+KRT +L+TR ASCFCS C+RSEYEQC+VSKT+P +VP M+DG VKETV+M TGVAP SEGI FP KKEC +R TGTQW++ S ASKIWE+LGR+EEPS + FGRWA
Sbjct: 236 LDAVASRWKGEGAKLQDPISGEEDMTCRKVKRTCSLRTRLASCFCSVCRRSEYEQCYVSKTFPRLVPVMEDGVVKETVIMGTGVAPVDEDASEGIKFPRYKKECKKKRTTGTQWQDGGSATASKIWEELGRKEEPSTFSSFGRWA 380 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14368.3366.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig14368.3366.1 >prot_Ecto-sp13_S_contig14368.3366.1 ID=prot_Ecto-sp13_S_contig14368.3366.1|Name=mRNA_Ecto-sp13_S_contig14368.3366.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=178bp MSQPAKQETTVDSHLQKADALLAALDSMDAENALRRLEEVGSQFARETRAback to top mRNA from alignment at Ecto-sp13_S_contig14368:2091..4115+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig14368.3366.1 ID=mRNA_Ecto-sp13_S_contig14368.3366.1|Name=mRNA_Ecto-sp13_S_contig14368.3366.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2025bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14368:2091..4115+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig14368:2091..4115+ >mRNA_Ecto-sp13_S_contig14368.3366.1 ID=mRNA_Ecto-sp13_S_contig14368.3366.1|Name=mRNA_Ecto-sp13_S_contig14368.3366.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=534bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14368:2091..4115+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |