mRNA_Ecto-sp13_S_contig143.3336.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
|
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig143.3336.1 vs. uniprot
Match: D7FKN0_ECTSI (Protein kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKN0_ECTSI) HSP 1 Score: 519 bits (1336), Expect = 4.460e-172 Identity = 266/292 (91.10%), Postives = 267/292 (91.44%), Query Frame = 1
Query: 1 VFLARQRETGREFAMKAISRARVQGKLQENLESEISILKSFRHGNIVELYDIKKTERHIYLVLEYCAGGDLRALIRKEGKLAETSARHFMRHLGSGLHFLWSKNLVHRDLKPQNLLLSGPSLDATLKIADFGFARHLAQASMAETICGSPLYMAPEILQGHKYGAKADLWSVGAILFEMLAGKPPFGGQNQIQLLANIRRGPSPPARDGFYPLPDGVPRPGRSCNELLCRLLVPDPQQRASFREFFNSDVLRSPSSLSSXXXXXXXXXXXXXXXXXXXXAEVGRRESXXTDR 876
VFLARQRETGREFAMKAISRARVQGKLQENLESEISILKSFRHGNIVELYDIKKTERHIYLVLEYCAGGDLRALIRKEGKLAETSARHFMRHLGSGLHFLWSKNLVHRDLKPQNLLLSGP LDATLKIADFGFARHLAQASMAETICGSPLYMAPEILQGHKYGAKADLWSVGAILFEMLAGKPPFGGQNQIQLLANIRRGPSPPARDGFYPLPDGVPRPGRSCNELLCRLLVPDPQQRASFREFFNSDVLRSPSS + AEVGRRES TDR
Sbjct: 22 VFLARQRETGREFAMKAISRARVQGKLQENLESEISILKSFRHGNIVELYDIKKTERHIYLVLEYCAGGDLRALIRKEGKLAETSARHFMRHLGSGLHFLWSKNLVHRDLKPQNLLLSGPGLDATLKIADFGFARHLAQASMAETICGSPLYMAPEILQGHKYGAKADLWSVGAILFEMLAGKPPFGGQNQIQLLANIRRGPSPPARDGFYPLPDGVPRPGRSCNELLCRLLVPDPQQRASFREFFNSDVLRSPSSAVAAADGSGATAVASGRGA----AEVGRRESSATDR 309
BLAST of mRNA_Ecto-sp13_S_contig143.3336.1 vs. uniprot
Match: A0A7S1CB65_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CB65_9STRA) HSP 1 Score: 278 bits (712), Expect = 1.580e-88 Identity = 147/248 (59.27%), Postives = 179/248 (72.18%), Query Frame = 1
Query: 1 VFLARQRETGREFAMKAISRARVQGKLQENLESEISILKSFRHGNIVELYDIKKTERHIYLVLEYCAGGDLRALIRKEGKLAETSARHFMRHLGSGLHFLWSKNLVHRDLKPQNLLLSGPSLDATLKIADFGFARHLAQASMAETICGSPLYMAPEILQGHKYGAKADLWSVGAILFEMLAGKPPFGGQNQIQLLANIRRGPSPPARDGFYPLPDGVPRPGRSCNELLCRLLVPDPQQRASFREFFNS 744
V+ A R TG A+KAIS ++ K QENLESEI IL+ RH NIV L++I+K++R+IYLVLEYCAGGDL LI K+G E ++FMR L SGL FLW++NL+HRDLKPQNLLL+ D LKIADFGFARHLA AS+AET+CGSPLYMAPEIL+ +Y AKADLWSVG I++EMLA +PPFGG+N ++LLANI R LP+G+ + C LL LL +P QRASF EFF S
Sbjct: 24 VYKAHHRVTGAVVAIKAISLKKMDRKAQENLESEIHILQEVRHPNIVRLFEIQKSDRYIYLVLEYCAGGDLSRLIHKKGPFTEARTQYFMRQLASGLRFLWNRNLIHRDLKPQNLLLTSTEEDGVLKIADFGFARHLAAASLAETLCGSPLYMAPEILRYQRYDAKADLWSVGTIMYEMLAKRPPFGGRNHVELLANIER--------QELRLPEGITI-SKECLGLLRILLRRNPVQRASFEEFFES 262
BLAST of mRNA_Ecto-sp13_S_contig143.3336.1 vs. uniprot
Match: A0A418D3B7_9STRA (Protein kinase domain-containing protein (Fragment) n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A418D3B7_9STRA) HSP 1 Score: 274 bits (701), Expect = 6.560e-86 Identity = 145/248 (58.47%), Postives = 180/248 (72.58%), Query Frame = 1
Query: 40 AMKAISRARVQGKLQENLESEISILKSFRHGNIVELYDIKKTERHIYLVLEYCAGGDLRALIRKE--GKLAETSARHFMRHLGSGLHFLWSKNLVHRDLKPQNLLLSGPSLDATLKIADFGFARHLAQASMAETICGSPLYMAPEILQGHKYGAKADLWSVGAILFEMLAGKPPFGGQNQIQLLANIRRGPSPPARDGFYPLPDGVPRPGRSCNELLCRLLVPDPQQRASFREFFNSDVLRSPSSLSS 777
A+KAI++ ++ KL ENLESEISI++ H NIV+LYDIKKT++HIYL+LEYC GGDL+ I+K+ G + E +ARHF+R L GLH LWS NL+HRDLKPQNLLL+ PS ++LKIADFGFARHL S+AET+CGSPLYMAPEILQ KY KADLWSVG IL+EM+ G+PPF G NQ+QLL NI+R D P +P GR L+ LLV DP++R SF +FF++ L P SS
Sbjct: 38 AVKAINKTKLNPKLLENLESEISIMRQINHPNIVKLYDIKKTDKHIYLMLEYCDGGDLQHFIKKQPNGVVTEATARHFLRELADGLHVLWSLNLIHRDLKPQNLLLTEPSATSSLKIADFGFARHLESTSLAETLCGSPLYMAPEILQFQKYDNKADLWSVGTILYEMVVGRPPFNGANQVQLLHNIQR-------DNVR-FPKDLPV-GRDAVALMEGLLVRDPKRRISFDQFFHAPFLDRPLPSSS 276
BLAST of mRNA_Ecto-sp13_S_contig143.3336.1 vs. uniprot
Match: A0A7S2G2R9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G2R9_9STRA) HSP 1 Score: 275 bits (704), Expect = 2.210e-85 Identity = 143/252 (56.75%), Postives = 180/252 (71.43%), Query Frame = 1
Query: 1 VFLARQRETGREFAMKAISRARVQGKLQENLESEISILKSFRHGNIVELYDIKKTERHIYLVLEYCAGGDLRALIRKEGKLAETSARHFMRHLGSGLHFLWSKNLVHRDLKPQNLLLSGPSLDATLKIADFGFARHLAQASMAETICGSPLYMAPEILQGHKYGAKADLWSVGAILFEMLAGKPPFGGQNQIQLLANIRRGPSPPARDGFYPLPDGVPRPGRSCNELLCRLLVPDPQQRASFREFFNSDVLR 756
V+L + +TG + A+K I R+R+ KL +NLESEISIL+ ++H NIV+L IKKT HI+LVLE+CAGGDL I+ GKL+E ++HFMRHL +GL FLW + L+HRD+KPQNLLL+ ATLKIADFGFARHLA+ S+A+T+CGSPLYMAPEIL KY AKADLWS G +LFEMLAG+PP+GG NQ +L+ NIRR LP GV SC L+ LL P RASF +F ++D L+
Sbjct: 36 VYLCQHEKTGAQRAIKKIDRSRLSTKLLQNLESEISILRDYQHTNIVKLDGIKKTRGHIFLVLEFCAGGDLHKFIKSRGKLSERVSKHFMRHLAAGLEFLWRRQLIHRDIKPQNLLLTASEETATLKIADFGFARHLAEESLADTLCGSPLYMAPEILSYQKYDAKADLWSAGTVLFEMLAGQPPYGGANQHELVENIRR--------KELRLPRGV-NISASCVTLIQMLLQRKPGHRASFEKFLSADFLK 278
BLAST of mRNA_Ecto-sp13_S_contig143.3336.1 vs. uniprot
Match: A0A836C971_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C971_9STRA) HSP 1 Score: 268 bits (686), Expect = 8.890e-85 Identity = 147/267 (55.06%), Postives = 185/267 (69.29%), Query Frame = 1
Query: 1 VFLARQRETGREFAMKAISRARVQGKLQENLESEISILKSFRHGNIVELYDIKKTERHIYLVLEYCAGGDLRALIRKEGKLAETSARHFMRHLGSGLHFLWSKNLVHRDLKPQNLLLS------GPSLDAT----LKIADFGFARHLAQASMAETICGSPLYMAPEILQGHKYGAKADLWSVGAILFEMLAGKPPFGGQNQIQLLANIRRGPSPPARDGFYPLPDGVPRPGRSCNELLCRLLVPDPQQRASFREFFNSDVLRSPSSL 771
V L + R +G A+K ISR ++ K ENLESEISIL++FRH N+VELYDIKKT+ +IYL+LEYC GGDL+ I+ G+L E +A+ FM HL +GL FLW ++L+HRDLKPQNLLL+ + AT LKIADFGFARHL ASMAET+CGSPLYMAPEIL+G +Y AKADLWSVGAILFEM+ G PPFGG N ++LL NI+ +P+ V G C E+L LL DP +RASF FF ++ + + + L
Sbjct: 22 VSLGQNRASGSLVAIKIISREQLNRKHTENLESEISILRNFRHPNMVELYDIKKTDNNIYLILEYCEGGDLQRFIKARGRLREGTAQAFMTHLAAGLKFLWERSLIHRDLKPQNLLLAKLPESLAHTAPATGGLILKIADFGFARHLEVASMAETLCGSPLYMAPEILEGRRYDAKADLWSVGAILFEMVVGHPPFGGANHLELLRNIK--------SRSLVVPEDV-EIGVGCLEVLKMLLKRDPNKRASFETFFGAEFVNAGAGL 279
BLAST of mRNA_Ecto-sp13_S_contig143.3336.1 vs. uniprot
Match: A0A024TZI0_9STRA (ULK/ULK protein kinase n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TZI0_9STRA) HSP 1 Score: 280 bits (715), Expect = 2.890e-84 Identity = 149/250 (59.60%), Postives = 184/250 (73.60%), Query Frame = 1
Query: 40 AMKAISRARVQGKLQENLESEISILKSFRHGNIVELYDIKKTERHIYLVLEYCAGGDLRALIRKE--GKLAETSARHFMRHLGSGLHFLWSKNLVHRDLKPQNLLLSGPSLDATLKIADFGFARHLAQASMAETICGSPLYMAPEILQGHKYGAKADLWSVGAILFEMLAGKPPFGGQNQIQLLANIRRGPSPPARDGFYPLPDGVPRPGRSCNELLCRLLVPDPQQRASFREFFNSDVLR--SPSSLSS 777
A+KAI++ ++ KL ENLESEISI++ H NIV+LYDIKKTE+HIYL+LEYC GGDL+ I+K+ G ++E +ARHF+R L GLH LWS NL+HRDLKPQNLLLS S A+LKIADFGFARHL S+AET+CGSPLYMAPEILQ KY +KADLWSVG IL+EM+ G+PPF G NQ+QLL NI+R P +P GR L+ LLV DP++R SF +FFN+ L SPSSL++
Sbjct: 38 AVKAINKQKLNPKLLENLESEISIMRQINHPNIVKLYDIKKTEKHIYLMLEYCDGGDLQHFIKKQPNGVVSEDTARHFLRELADGLHVLWSLNLIHRDLKPQNLLLSEASATASLKIADFGFARHLESTSLAETLCGSPLYMAPEILQFQKYDSKADLWSVGTILYEMVVGRPPFNGANQVQLLHNIQR--------ESVRFPKDLPV-GRDAINLMEGLLVRDPKRRISFDQFFNAPFLNRPSPSSLTA 278
BLAST of mRNA_Ecto-sp13_S_contig143.3336.1 vs. uniprot
Match: A0A7S2C5C8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2C5C8_9STRA) HSP 1 Score: 265 bits (678), Expect = 1.980e-82 Identity = 143/259 (55.21%), Postives = 175/259 (67.57%), Query Frame = 1
Query: 1 VFLARQRETGREFAMKAISRARVQGKLQENLESEISILKSFRHGNIVELYDIKKTERHIYLVLEYCAGGDLRALIRKEGKLAETSARHFMRHLGSGLHFLWSKNLVHRDLKPQNLLLSGPSLDATLKIADFGFARHLAQASMAETICGSPLYMAPEILQGHKYGAKADLWSVGAILFEMLAGKPPFGGQNQIQLLANIRRGPSPPARDGFYPLPDGVPRPGRSCNELLCRLLVPDPQQRASFREFFNSDVLRSPSSLSS 777
V+ A TG A+K I R R+ KL +NLESEISIL+ F+H NIV L I+KT HIYLVLE+CAGGDL IR +G+L+E A HFMRHL GL FLW + L+HRD+KPQNLLL+ S ATLKIADFGFAR L MA+T+CGSPLYMAPEIL G KY AKADLWS G +LFEMLAG+PP+GG Q +L+ NIRR LP GV C L+ LL P++RASF F +++ L+ + ++S
Sbjct: 48 VYHAVSERTGAASAVKKIDRTRLSSKLLQNLESEISILRDFQHVNIVCLEGIRKTSSHIYLVLEFCAGGDLHKYIRSKGRLSERVASHFMRHLAFGLEFLWRRQLIHRDIKPQNLLLTAASDSATLKIADFGFARSLGAGKMADTMCGSPLYMAPEILSGQKYDAKADLWSAGTVLFEMLAGQPPYGGSTQHELMDNIRR--------KELRLPRGV-NIAPPCVTLIQMLLKRMPEKRASFEMFLSAEFLKPQNQIAS 297
BLAST of mRNA_Ecto-sp13_S_contig143.3336.1 vs. uniprot
Match: A0A3R6ZWT5_9STRA (Protein kinase domain-containing protein n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R6ZWT5_9STRA) HSP 1 Score: 271 bits (693), Expect = 7.370e-82 Identity = 142/243 (58.44%), Postives = 177/243 (72.84%), Query Frame = 1
Query: 40 AMKAISRARVQGKLQENLESEISILKSFRHGNIVELYDIKKTERHIYLVLEYCAGGDLRALIRKE--GKLAETSARHFMRHLGSGLHFLWSKNLVHRDLKPQNLLLSGPSLDATLKIADFGFARHLAQASMAETICGSPLYMAPEILQGHKYGAKADLWSVGAILFEMLAGKPPFGGQNQIQLLANIRRGPSPPARDGFYPLPDGVPRPGRSCNELLCRLLVPDPQQRASFREFFNSDVLRSP 762
A+KAI++ ++ KL ENLESEISI++ H NIV+LYDIKKT++HIYL+LEYC GGDL+ I+K+ G + E +ARHF+R L GLH LWS NL+HRDLKPQNLLL+ PS ++LKIADFGFARHL S+AET+CGSPLYMAPEILQ KY KADLWSVG IL+EM+ G+PPF G NQ+QLL NI+R D P +P G L+ LLV DP++R SF +FF++ L P
Sbjct: 38 AVKAINKTKLNPKLLENLESEISIMRQINHPNIVKLYDIKKTDKHIYLMLEYCDGGDLQHFIKKQPNGVVTEATARHFLRELADGLHVLWSLNLIHRDLKPQNLLLTEPSATSSLKIADFGFARHLESTSLAETLCGSPLYMAPEILQFQKYDNKADLWSVGTILYEMVVGRPPFNGANQVQLLHNIQR-------DNVR-FPKDLPV-GHDAVALMEGLLVRDPKRRISFDQFFHAPFLDRP 271
BLAST of mRNA_Ecto-sp13_S_contig143.3336.1 vs. uniprot
Match: A0A418F0C5_9STRA (Protein kinase domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A418F0C5_9STRA) HSP 1 Score: 258 bits (659), Expect = 4.960e-81 Identity = 125/189 (66.14%), Postives = 153/189 (80.95%), Query Frame = 1
Query: 40 AMKAISRARVQGKLQENLESEISILKSFRHGNIVELYDIKKTERHIYLVLEYCAGGDLRALIRKE--GKLAETSARHFMRHLGSGLHFLWSKNLVHRDLKPQNLLLSGPSLDATLKIADFGFARHLAQASMAETICGSPLYMAPEILQGHKYGAKADLWSVGAILFEMLAGKPPFGGQNQIQLLANIRR 600
A+KAI++ ++ KL ENLESEISI++ H NIV+LYDIKKT++HIYL+LEYC GGDL+ I+K+ G + E +ARHF+R L GLH LWS NL+HRDLKPQNLLL+ PS ++LKIADFGFARHL S+AET+CGSPLYMAPEILQ KY KADLWSVG IL+EM+ G+PPF G NQ+QLL NI+R
Sbjct: 38 AVKAINKTKLNPKLLENLESEISIMRQINHPNIVKLYDIKKTDKHIYLMLEYCDGGDLQHFIKKQPNGVVTEATARHFLRELADGLHVLWSLNLIHRDLKPQNLLLTEPSATSSLKIADFGFARHLESTSLAETLCGSPLYMAPEILQFQKYDNKADLWSVGTILYEMVVGRPPFNGANQVQLLHNIQR 226
BLAST of mRNA_Ecto-sp13_S_contig143.3336.1 vs. uniprot
Match: A0A7S3LN66_9STRA (Hypothetical protein (Fragment) n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3LN66_9STRA) HSP 1 Score: 256 bits (654), Expect = 2.100e-80 Identity = 135/241 (56.02%), Postives = 169/241 (70.12%), Query Frame = 1
Query: 40 AMKAISRARVQGKLQENLESEISILKSFRHGNIVELYDIKKTERHIYLVLEYCAGGDLRALIRKE--GKLAETSARHFMRHLGSGLHFLWSKNLVHRDLKPQNLLLSGPSLDAT----LKIADFGFARHLAQASMAETICGSPLYMAPEILQGHKYGAKADLWSVGAILFEMLAGKPPFGGQNQIQLLANIRRGPSPPARDGFYPLPDGVPRPGRSCNELLCRLLVPDPQQRASFREFFNS 744
A+K+IS +++ KLQENL +EI IL+ H N+V LY I+K++RHIYL++EYC GGDL I+K GKL+ ++RHFMR LG G+ +LWSK+L+HRDLKPQNLLLS T LKIADFGFARHLA A+MAET+CGSPLYMAPEIL+ HKY AKADLWS G ILFEML G+PPF G N +LL NI + + +P + C +L+ +LL DP +R SF EFF S
Sbjct: 36 AIKSISASKLNKKLQENLTTEIGILRKIAHVNVVRLYGIQKSDRHIYLLMEYCDGGDLHRFIKKSPSGKLSIETSRHFMRQLGVGMKYLWSKSLIHRDLKPQNLLLSSDGAGGTGQWQLKIADFGFARHLAVAAMAETLCGSPLYMAPEILKFHKYDAKADLWSAGTILFEMLTGRPPFHGANPQELLRNIEK------TELLFPQGISI---NTDCRDLIQQLLRKDPIERVSFEEFFRS 267 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig143.3336.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig143.3336.1 >prot_Ecto-sp13_S_contig143.3336.1 ID=prot_Ecto-sp13_S_contig143.3336.1|Name=mRNA_Ecto-sp13_S_contig143.3336.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=377bp VFLARQRETGREFAMKAISRARVQGKLQENLESEISILKSFRHGNIVELYback to top mRNA from alignment at Ecto-sp13_S_contig143:2974..8120+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig143.3336.1 ID=mRNA_Ecto-sp13_S_contig143.3336.1|Name=mRNA_Ecto-sp13_S_contig143.3336.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5147bp|location=Sequence derived from alignment at Ecto-sp13_S_contig143:2974..8120+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig143:2974..8120+ >mRNA_Ecto-sp13_S_contig143.3336.1 ID=mRNA_Ecto-sp13_S_contig143.3336.1|Name=mRNA_Ecto-sp13_S_contig143.3336.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1131bp|location=Sequence derived from alignment at Ecto-sp13_S_contig143:2974..8120+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |