mRNA_Ecto-sp13_S_contig143.3336.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig143.3336.1
Unique NamemRNA_Ecto-sp13_S_contig143.3336.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig143.3336.1 vs. uniprot
Match: D7FKN0_ECTSI (Protein kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKN0_ECTSI)

HSP 1 Score: 519 bits (1336), Expect = 4.460e-172
Identity = 266/292 (91.10%), Postives = 267/292 (91.44%), Query Frame = 1
Query:    1 VFLARQRETGREFAMKAISRARVQGKLQENLESEISILKSFRHGNIVELYDIKKTERHIYLVLEYCAGGDLRALIRKEGKLAETSARHFMRHLGSGLHFLWSKNLVHRDLKPQNLLLSGPSLDATLKIADFGFARHLAQASMAETICGSPLYMAPEILQGHKYGAKADLWSVGAILFEMLAGKPPFGGQNQIQLLANIRRGPSPPARDGFYPLPDGVPRPGRSCNELLCRLLVPDPQQRASFREFFNSDVLRSPSSLSSXXXXXXXXXXXXXXXXXXXXAEVGRRESXXTDR 876
            VFLARQRETGREFAMKAISRARVQGKLQENLESEISILKSFRHGNIVELYDIKKTERHIYLVLEYCAGGDLRALIRKEGKLAETSARHFMRHLGSGLHFLWSKNLVHRDLKPQNLLLSGP LDATLKIADFGFARHLAQASMAETICGSPLYMAPEILQGHKYGAKADLWSVGAILFEMLAGKPPFGGQNQIQLLANIRRGPSPPARDGFYPLPDGVPRPGRSCNELLCRLLVPDPQQRASFREFFNSDVLRSPSS  +                    AEVGRRES  TDR
Sbjct:   22 VFLARQRETGREFAMKAISRARVQGKLQENLESEISILKSFRHGNIVELYDIKKTERHIYLVLEYCAGGDLRALIRKEGKLAETSARHFMRHLGSGLHFLWSKNLVHRDLKPQNLLLSGPGLDATLKIADFGFARHLAQASMAETICGSPLYMAPEILQGHKYGAKADLWSVGAILFEMLAGKPPFGGQNQIQLLANIRRGPSPPARDGFYPLPDGVPRPGRSCNELLCRLLVPDPQQRASFREFFNSDVLRSPSSAVAAADGSGATAVASGRGA----AEVGRRESSATDR 309          
BLAST of mRNA_Ecto-sp13_S_contig143.3336.1 vs. uniprot
Match: A0A7S1CB65_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CB65_9STRA)

HSP 1 Score: 278 bits (712), Expect = 1.580e-88
Identity = 147/248 (59.27%), Postives = 179/248 (72.18%), Query Frame = 1
Query:    1 VFLARQRETGREFAMKAISRARVQGKLQENLESEISILKSFRHGNIVELYDIKKTERHIYLVLEYCAGGDLRALIRKEGKLAETSARHFMRHLGSGLHFLWSKNLVHRDLKPQNLLLSGPSLDATLKIADFGFARHLAQASMAETICGSPLYMAPEILQGHKYGAKADLWSVGAILFEMLAGKPPFGGQNQIQLLANIRRGPSPPARDGFYPLPDGVPRPGRSCNELLCRLLVPDPQQRASFREFFNS 744
            V+ A  R TG   A+KAIS  ++  K QENLESEI IL+  RH NIV L++I+K++R+IYLVLEYCAGGDL  LI K+G   E   ++FMR L SGL FLW++NL+HRDLKPQNLLL+    D  LKIADFGFARHLA AS+AET+CGSPLYMAPEIL+  +Y AKADLWSVG I++EMLA +PPFGG+N ++LLANI R            LP+G+    + C  LL  LL  +P QRASF EFF S
Sbjct:   24 VYKAHHRVTGAVVAIKAISLKKMDRKAQENLESEIHILQEVRHPNIVRLFEIQKSDRYIYLVLEYCAGGDLSRLIHKKGPFTEARTQYFMRQLASGLRFLWNRNLIHRDLKPQNLLLTSTEEDGVLKIADFGFARHLAAASLAETLCGSPLYMAPEILRYQRYDAKADLWSVGTIMYEMLAKRPPFGGRNHVELLANIER--------QELRLPEGITI-SKECLGLLRILLRRNPVQRASFEEFFES 262          
BLAST of mRNA_Ecto-sp13_S_contig143.3336.1 vs. uniprot
Match: A0A418D3B7_9STRA (Protein kinase domain-containing protein (Fragment) n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A418D3B7_9STRA)

HSP 1 Score: 274 bits (701), Expect = 6.560e-86
Identity = 145/248 (58.47%), Postives = 180/248 (72.58%), Query Frame = 1
Query:   40 AMKAISRARVQGKLQENLESEISILKSFRHGNIVELYDIKKTERHIYLVLEYCAGGDLRALIRKE--GKLAETSARHFMRHLGSGLHFLWSKNLVHRDLKPQNLLLSGPSLDATLKIADFGFARHLAQASMAETICGSPLYMAPEILQGHKYGAKADLWSVGAILFEMLAGKPPFGGQNQIQLLANIRRGPSPPARDGFYPLPDGVPRPGRSCNELLCRLLVPDPQQRASFREFFNSDVLRSPSSLSS 777
            A+KAI++ ++  KL ENLESEISI++   H NIV+LYDIKKT++HIYL+LEYC GGDL+  I+K+  G + E +ARHF+R L  GLH LWS NL+HRDLKPQNLLL+ PS  ++LKIADFGFARHL   S+AET+CGSPLYMAPEILQ  KY  KADLWSVG IL+EM+ G+PPF G NQ+QLL NI+R       D     P  +P  GR    L+  LLV DP++R SF +FF++  L  P   SS
Sbjct:   38 AVKAINKTKLNPKLLENLESEISIMRQINHPNIVKLYDIKKTDKHIYLMLEYCDGGDLQHFIKKQPNGVVTEATARHFLRELADGLHVLWSLNLIHRDLKPQNLLLTEPSATSSLKIADFGFARHLESTSLAETLCGSPLYMAPEILQFQKYDNKADLWSVGTILYEMVVGRPPFNGANQVQLLHNIQR-------DNVR-FPKDLPV-GRDAVALMEGLLVRDPKRRISFDQFFHAPFLDRPLPSSS 276          
BLAST of mRNA_Ecto-sp13_S_contig143.3336.1 vs. uniprot
Match: A0A7S2G2R9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G2R9_9STRA)

HSP 1 Score: 275 bits (704), Expect = 2.210e-85
Identity = 143/252 (56.75%), Postives = 180/252 (71.43%), Query Frame = 1
Query:    1 VFLARQRETGREFAMKAISRARVQGKLQENLESEISILKSFRHGNIVELYDIKKTERHIYLVLEYCAGGDLRALIRKEGKLAETSARHFMRHLGSGLHFLWSKNLVHRDLKPQNLLLSGPSLDATLKIADFGFARHLAQASMAETICGSPLYMAPEILQGHKYGAKADLWSVGAILFEMLAGKPPFGGQNQIQLLANIRRGPSPPARDGFYPLPDGVPRPGRSCNELLCRLLVPDPQQRASFREFFNSDVLR 756
            V+L +  +TG + A+K I R+R+  KL +NLESEISIL+ ++H NIV+L  IKKT  HI+LVLE+CAGGDL   I+  GKL+E  ++HFMRHL +GL FLW + L+HRD+KPQNLLL+     ATLKIADFGFARHLA+ S+A+T+CGSPLYMAPEIL   KY AKADLWS G +LFEMLAG+PP+GG NQ +L+ NIRR            LP GV     SC  L+  LL   P  RASF +F ++D L+
Sbjct:   36 VYLCQHEKTGAQRAIKKIDRSRLSTKLLQNLESEISILRDYQHTNIVKLDGIKKTRGHIFLVLEFCAGGDLHKFIKSRGKLSERVSKHFMRHLAAGLEFLWRRQLIHRDIKPQNLLLTASEETATLKIADFGFARHLAEESLADTLCGSPLYMAPEILSYQKYDAKADLWSAGTVLFEMLAGQPPYGGANQHELVENIRR--------KELRLPRGV-NISASCVTLIQMLLQRKPGHRASFEKFLSADFLK 278          
BLAST of mRNA_Ecto-sp13_S_contig143.3336.1 vs. uniprot
Match: A0A836C971_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C971_9STRA)

HSP 1 Score: 268 bits (686), Expect = 8.890e-85
Identity = 147/267 (55.06%), Postives = 185/267 (69.29%), Query Frame = 1
Query:    1 VFLARQRETGREFAMKAISRARVQGKLQENLESEISILKSFRHGNIVELYDIKKTERHIYLVLEYCAGGDLRALIRKEGKLAETSARHFMRHLGSGLHFLWSKNLVHRDLKPQNLLLS------GPSLDAT----LKIADFGFARHLAQASMAETICGSPLYMAPEILQGHKYGAKADLWSVGAILFEMLAGKPPFGGQNQIQLLANIRRGPSPPARDGFYPLPDGVPRPGRSCNELLCRLLVPDPQQRASFREFFNSDVLRSPSSL 771
            V L + R +G   A+K ISR ++  K  ENLESEISIL++FRH N+VELYDIKKT+ +IYL+LEYC GGDL+  I+  G+L E +A+ FM HL +GL FLW ++L+HRDLKPQNLLL+        +  AT    LKIADFGFARHL  ASMAET+CGSPLYMAPEIL+G +Y AKADLWSVGAILFEM+ G PPFGG N ++LL NI+             +P+ V   G  C E+L  LL  DP +RASF  FF ++ + + + L
Sbjct:   22 VSLGQNRASGSLVAIKIISREQLNRKHTENLESEISILRNFRHPNMVELYDIKKTDNNIYLILEYCEGGDLQRFIKARGRLREGTAQAFMTHLAAGLKFLWERSLIHRDLKPQNLLLAKLPESLAHTAPATGGLILKIADFGFARHLEVASMAETLCGSPLYMAPEILEGRRYDAKADLWSVGAILFEMVVGHPPFGGANHLELLRNIK--------SRSLVVPEDV-EIGVGCLEVLKMLLKRDPNKRASFETFFGAEFVNAGAGL 279          
BLAST of mRNA_Ecto-sp13_S_contig143.3336.1 vs. uniprot
Match: A0A024TZI0_9STRA (ULK/ULK protein kinase n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TZI0_9STRA)

HSP 1 Score: 280 bits (715), Expect = 2.890e-84
Identity = 149/250 (59.60%), Postives = 184/250 (73.60%), Query Frame = 1
Query:   40 AMKAISRARVQGKLQENLESEISILKSFRHGNIVELYDIKKTERHIYLVLEYCAGGDLRALIRKE--GKLAETSARHFMRHLGSGLHFLWSKNLVHRDLKPQNLLLSGPSLDATLKIADFGFARHLAQASMAETICGSPLYMAPEILQGHKYGAKADLWSVGAILFEMLAGKPPFGGQNQIQLLANIRRGPSPPARDGFYPLPDGVPRPGRSCNELLCRLLVPDPQQRASFREFFNSDVLR--SPSSLSS 777
            A+KAI++ ++  KL ENLESEISI++   H NIV+LYDIKKTE+HIYL+LEYC GGDL+  I+K+  G ++E +ARHF+R L  GLH LWS NL+HRDLKPQNLLLS  S  A+LKIADFGFARHL   S+AET+CGSPLYMAPEILQ  KY +KADLWSVG IL+EM+ G+PPF G NQ+QLL NI+R             P  +P  GR    L+  LLV DP++R SF +FFN+  L   SPSSL++
Sbjct:   38 AVKAINKQKLNPKLLENLESEISIMRQINHPNIVKLYDIKKTEKHIYLMLEYCDGGDLQHFIKKQPNGVVSEDTARHFLRELADGLHVLWSLNLIHRDLKPQNLLLSEASATASLKIADFGFARHLESTSLAETLCGSPLYMAPEILQFQKYDSKADLWSVGTILYEMVVGRPPFNGANQVQLLHNIQR--------ESVRFPKDLPV-GRDAINLMEGLLVRDPKRRISFDQFFNAPFLNRPSPSSLTA 278          
BLAST of mRNA_Ecto-sp13_S_contig143.3336.1 vs. uniprot
Match: A0A7S2C5C8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2C5C8_9STRA)

HSP 1 Score: 265 bits (678), Expect = 1.980e-82
Identity = 143/259 (55.21%), Postives = 175/259 (67.57%), Query Frame = 1
Query:    1 VFLARQRETGREFAMKAISRARVQGKLQENLESEISILKSFRHGNIVELYDIKKTERHIYLVLEYCAGGDLRALIRKEGKLAETSARHFMRHLGSGLHFLWSKNLVHRDLKPQNLLLSGPSLDATLKIADFGFARHLAQASMAETICGSPLYMAPEILQGHKYGAKADLWSVGAILFEMLAGKPPFGGQNQIQLLANIRRGPSPPARDGFYPLPDGVPRPGRSCNELLCRLLVPDPQQRASFREFFNSDVLRSPSSLSS 777
            V+ A    TG   A+K I R R+  KL +NLESEISIL+ F+H NIV L  I+KT  HIYLVLE+CAGGDL   IR +G+L+E  A HFMRHL  GL FLW + L+HRD+KPQNLLL+  S  ATLKIADFGFAR L    MA+T+CGSPLYMAPEIL G KY AKADLWS G +LFEMLAG+PP+GG  Q +L+ NIRR            LP GV      C  L+  LL   P++RASF  F +++ L+  + ++S
Sbjct:   48 VYHAVSERTGAASAVKKIDRTRLSSKLLQNLESEISILRDFQHVNIVCLEGIRKTSSHIYLVLEFCAGGDLHKYIRSKGRLSERVASHFMRHLAFGLEFLWRRQLIHRDIKPQNLLLTAASDSATLKIADFGFARSLGAGKMADTMCGSPLYMAPEILSGQKYDAKADLWSAGTVLFEMLAGQPPYGGSTQHELMDNIRR--------KELRLPRGV-NIAPPCVTLIQMLLKRMPEKRASFEMFLSAEFLKPQNQIAS 297          
BLAST of mRNA_Ecto-sp13_S_contig143.3336.1 vs. uniprot
Match: A0A3R6ZWT5_9STRA (Protein kinase domain-containing protein n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R6ZWT5_9STRA)

HSP 1 Score: 271 bits (693), Expect = 7.370e-82
Identity = 142/243 (58.44%), Postives = 177/243 (72.84%), Query Frame = 1
Query:   40 AMKAISRARVQGKLQENLESEISILKSFRHGNIVELYDIKKTERHIYLVLEYCAGGDLRALIRKE--GKLAETSARHFMRHLGSGLHFLWSKNLVHRDLKPQNLLLSGPSLDATLKIADFGFARHLAQASMAETICGSPLYMAPEILQGHKYGAKADLWSVGAILFEMLAGKPPFGGQNQIQLLANIRRGPSPPARDGFYPLPDGVPRPGRSCNELLCRLLVPDPQQRASFREFFNSDVLRSP 762
            A+KAI++ ++  KL ENLESEISI++   H NIV+LYDIKKT++HIYL+LEYC GGDL+  I+K+  G + E +ARHF+R L  GLH LWS NL+HRDLKPQNLLL+ PS  ++LKIADFGFARHL   S+AET+CGSPLYMAPEILQ  KY  KADLWSVG IL+EM+ G+PPF G NQ+QLL NI+R       D     P  +P  G     L+  LLV DP++R SF +FF++  L  P
Sbjct:   38 AVKAINKTKLNPKLLENLESEISIMRQINHPNIVKLYDIKKTDKHIYLMLEYCDGGDLQHFIKKQPNGVVTEATARHFLRELADGLHVLWSLNLIHRDLKPQNLLLTEPSATSSLKIADFGFARHLESTSLAETLCGSPLYMAPEILQFQKYDNKADLWSVGTILYEMVVGRPPFNGANQVQLLHNIQR-------DNVR-FPKDLPV-GHDAVALMEGLLVRDPKRRISFDQFFHAPFLDRP 271          
BLAST of mRNA_Ecto-sp13_S_contig143.3336.1 vs. uniprot
Match: A0A418F0C5_9STRA (Protein kinase domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A418F0C5_9STRA)

HSP 1 Score: 258 bits (659), Expect = 4.960e-81
Identity = 125/189 (66.14%), Postives = 153/189 (80.95%), Query Frame = 1
Query:   40 AMKAISRARVQGKLQENLESEISILKSFRHGNIVELYDIKKTERHIYLVLEYCAGGDLRALIRKE--GKLAETSARHFMRHLGSGLHFLWSKNLVHRDLKPQNLLLSGPSLDATLKIADFGFARHLAQASMAETICGSPLYMAPEILQGHKYGAKADLWSVGAILFEMLAGKPPFGGQNQIQLLANIRR 600
            A+KAI++ ++  KL ENLESEISI++   H NIV+LYDIKKT++HIYL+LEYC GGDL+  I+K+  G + E +ARHF+R L  GLH LWS NL+HRDLKPQNLLL+ PS  ++LKIADFGFARHL   S+AET+CGSPLYMAPEILQ  KY  KADLWSVG IL+EM+ G+PPF G NQ+QLL NI+R
Sbjct:   38 AVKAINKTKLNPKLLENLESEISIMRQINHPNIVKLYDIKKTDKHIYLMLEYCDGGDLQHFIKKQPNGVVTEATARHFLRELADGLHVLWSLNLIHRDLKPQNLLLTEPSATSSLKIADFGFARHLESTSLAETLCGSPLYMAPEILQFQKYDNKADLWSVGTILYEMVVGRPPFNGANQVQLLHNIQR 226          
BLAST of mRNA_Ecto-sp13_S_contig143.3336.1 vs. uniprot
Match: A0A7S3LN66_9STRA (Hypothetical protein (Fragment) n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3LN66_9STRA)

HSP 1 Score: 256 bits (654), Expect = 2.100e-80
Identity = 135/241 (56.02%), Postives = 169/241 (70.12%), Query Frame = 1
Query:   40 AMKAISRARVQGKLQENLESEISILKSFRHGNIVELYDIKKTERHIYLVLEYCAGGDLRALIRKE--GKLAETSARHFMRHLGSGLHFLWSKNLVHRDLKPQNLLLSGPSLDAT----LKIADFGFARHLAQASMAETICGSPLYMAPEILQGHKYGAKADLWSVGAILFEMLAGKPPFGGQNQIQLLANIRRGPSPPARDGFYPLPDGVPRPGRSCNELLCRLLVPDPQQRASFREFFNS 744
            A+K+IS +++  KLQENL +EI IL+   H N+V LY I+K++RHIYL++EYC GGDL   I+K   GKL+  ++RHFMR LG G+ +LWSK+L+HRDLKPQNLLLS      T    LKIADFGFARHLA A+MAET+CGSPLYMAPEIL+ HKY AKADLWS G ILFEML G+PPF G N  +LL NI +       +  +P    +      C +L+ +LL  DP +R SF EFF S
Sbjct:   36 AIKSISASKLNKKLQENLTTEIGILRKIAHVNVVRLYGIQKSDRHIYLLMEYCDGGDLHRFIKKSPSGKLSIETSRHFMRQLGVGMKYLWSKSLIHRDLKPQNLLLSSDGAGGTGQWQLKIADFGFARHLAVAAMAETLCGSPLYMAPEILKFHKYDAKADLWSAGTILFEMLTGRPPFHGANPQELLRNIEK------TELLFPQGISI---NTDCRDLIQQLLRKDPIERVSFEEFFRS 267          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig143.3336.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FKN0_ECTSI4.460e-17291.10Protein kinase domain-containing protein n=2 Tax=E... [more]
A0A7S1CB65_9STRA1.580e-8859.27Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A418D3B7_9STRA6.560e-8658.47Protein kinase domain-containing protein (Fragment... [more]
A0A7S2G2R9_9STRA2.210e-8556.75Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
A0A836C971_9STRA8.890e-8555.06Kinase-like domain-containing protein n=1 Tax=Trib... [more]
A0A024TZI0_9STRA2.890e-8459.60ULK/ULK protein kinase n=1 Tax=Aphanomyces invadan... [more]
A0A7S2C5C8_9STRA1.980e-8255.21Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A3R6ZWT5_9STRA7.370e-8258.44Protein kinase domain-containing protein n=4 Tax=A... [more]
A0A418F0C5_9STRA4.960e-8166.14Protein kinase domain-containing protein n=1 Tax=A... [more]
A0A7S3LN66_9STRA2.100e-8056.02Hypothetical protein (Fragment) n=1 Tax=Aplanochyt... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig143contigEcto-sp13_S_contig143:2974..8120 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score523.5
Seed ortholog evalue8.3e-146
Seed eggNOG ortholog2880.D7FKN0
Model size1133
KEGG koko:K08269,ko:K21358
KEGG Pathwayko04136,ko04138,ko04139,ko04140,ko04150,ko04212,map04136,map04138,map04139,map04140,map04150,map04212
Hectar predicted targeting categoryother localisation
Exons6
EggNOG free text desc.protein serine/threonine kinase activity
EggNOG OGsKOG0595@1,KOG0595@2759
Ec32 ortholog descriptionProtein kinase-like domain
Ec32 orthologEc-09_000840.3
EC2.7.11.1
Cds size1131
COG Functional cat.T
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01001,ko03029,ko04131
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig143.3336.1prot_Ecto-sp13_S_contig143.3336.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig143 2974..8118 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462764.7079244-CDS-Ecto-sp13_S_contig143:2973..30451681462764.7079244-CDS-Ecto-sp13_S_contig143:2973..3045Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig143 2974..3045 +
1681462764.71863-CDS-Ecto-sp13_S_contig143:4069..41561681462764.71863-CDS-Ecto-sp13_S_contig143:4069..4156Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig143 4070..4156 +
1681462764.7267845-CDS-Ecto-sp13_S_contig143:4834..49551681462764.7267845-CDS-Ecto-sp13_S_contig143:4834..4955Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig143 4835..4955 +
1681462764.7351491-CDS-Ecto-sp13_S_contig143:5622..58011681462764.7351491-CDS-Ecto-sp13_S_contig143:5622..5801Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig143 5623..5801 +
1681462764.7440488-CDS-Ecto-sp13_S_contig143:6741..68551681462764.7440488-CDS-Ecto-sp13_S_contig143:6741..6855Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig143 6742..6855 +
1681462764.7540753-CDS-Ecto-sp13_S_contig143:7560..81181681462764.7540753-CDS-Ecto-sp13_S_contig143:7560..8118Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig143 7561..8118 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig143.3336.1

>prot_Ecto-sp13_S_contig143.3336.1 ID=prot_Ecto-sp13_S_contig143.3336.1|Name=mRNA_Ecto-sp13_S_contig143.3336.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=377bp
VFLARQRETGREFAMKAISRARVQGKLQENLESEISILKSFRHGNIVELY
DIKKTERHIYLVLEYCAGGDLRALIRKEGKLAETSARHFMRHLGSGLHFL
WSKNLVHRDLKPQNLLLSGPSLDATLKIADFGFARHLAQASMAETICGSP
LYMAPEILQGHKYGAKADLWSVGAILFEMLAGKPPFGGQNQIQLLANIRR
GPSPPARDGFYPLPDGVPRPGRSCNELLCRLLVPDPQQRASFREFFNSDV
LRSPSSLSSSAAAAADGSGATAVAAGRGAAEVGRRESSATDRTVSGGGGG
GGGGSARNVTEGDAFAASGAAAAAAAAAYSAGAQQQQQHHQTAASQPRGG
RGVQRSPPGALGVAAGAGRNRAQQQDQ
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mRNA from alignment at Ecto-sp13_S_contig143:2974..8120+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig143.3336.1 ID=mRNA_Ecto-sp13_S_contig143.3336.1|Name=mRNA_Ecto-sp13_S_contig143.3336.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5147bp|location=Sequence derived from alignment at Ecto-sp13_S_contig143:2974..8120+ (Ectocarpus species13 EcNAP12_S_4_19m)
GTGTTCCTTGCTCGTCAGCGGGAAACGGGGAGGGAGTTCGCGATGAAAGC CATCAGTCGCGCTCGTGTGCAGGTGTGTTGTGGCGCTACGGTTGTTGCCC TGCTTGTTGTCTTGGCCGGCTATCGTTTGTGTGGGCGTTCCGAGGTTCTC GTATTGTCCATTGGTTGCTCAGTACCACCTTTACGTTGTTTCTTCCTATC GTCCTTGTTGTTACGCGGTGTTGATGTAGGCGGGTGACGGCAAGTGCTGT TGTCTGCGTGACCGTCTCGACAATTTTCAGATGGTCGGACATTCTCATTA AAGACCGCCTCCGCGAGATTAATGGGTTAGTGAGGAAGTCAAACAGGGAC GGGGGGCGCAGACCCTGTTCCATAACCCAACTCCCCGATTGCATGCTTTA CGCAACTTGTTTACTGCATCGAAAATTGCTGCGAAGGCTGCTGCTCCGCA CAGCCCGTACCGCCGCACTTTCCATAAGACTGAAATGAAAGATGCTTCTG GATAACCCTTACCGCCGCACTTTCCCTAGACTGAAATGAGTACTTCCAAT AACCCGTACTGCTGCACTTTCCCTAGACTGAAATGAAAGGTACTTCCAAT AGCCCGTATCGCCGCACTTTCCCCAGACTGAAATGAAAGGTACTTCCGGA TAACCCGTACTGCCGCACTTTCCCTGGACGTAATGAAAGGTACTTCCGGA TAACCCGTACCGCCGCACTTTCCCTGGACTGAAATGAAACATACTTATGG ATAACCCGTGCCGCCGCACTTTCCCTGTACTGAAATGAAAGATACCCCTG GATCACGAGAGACTCGTGTTTCAAGCCGCGTTGTTTGTTCCCTGAGGAAC CATGATTCCCCCAAAGACCGTGGTCATCTGTGTCCGTGCACTTGCTTGAC GCGCTACTTGTACCCGTCTGGCGGTCCTCGCCGTCAAGCATCAGACCGGC TAGCGCACACAGTGGACAAACTTCCAAAATGAAGTTACCGCTGTAGGTTG AAAGATCGAAGGTCGCTCAACTGATTGGTTGAGAGATTCAATGGTAAGAG GCCGCTTGTTGTTGTCCCCGTCGTCTCTCGTCGCGCACGAGGACAGGGAA AACTCCAAGAGAACCTGGAGTCGGAGATTTCGATCCTCAAGAGCTTCCGT CACGGCAACATCGTCGAGCTCTACGACATCAAGGTACGAGGTATTGGCTG TGCAAGCTCTTCTGTCTTGGATCGCGGGTGCTTTTTCTGCTGATGTTCGT GAAGGAATCTCGAGTATCCACGAAAACCAGACAGGCTTCACGGTGGATAG GCTTCACGGTGGTACTCGCCGAATTGAGTGGCGCGTCTACCGGCGAGACG GATAGTTGGGTCTTCGTTTCGTGCGTGGCGTTGACATGTGTTGGAAGATG CTTGTGGACGCGTGCGCACGTGCTGCGCGCACGCATCCCTGGCGTATTTC GGGAGCCAGCAGCTGAACGTGTTACAGGGGAACGCGAGGAATTTTTTAAT GGCATGCGCTGCTTGTCGACAGGCTCGGTATTTGGCAACAGTGTGAGGGT CGGTTTGTTGCAGCACGTTGCTCTTGCTACTGCCGTTGCCTCATGCATTA CCTATTGTCAAGGGTGTAAAAAACGTACAGTATTAGGGTGCTGACACTCG ATGTTTCGACAAAGCGCAAGCAGGCCATTTCGTCACACATGAACTTACCA CAATTGCATGCTGGTGATATTGGAAATTCATCCGTTGTTGGGTAGGGTAC CACCCAGGATAGAGCTGTAACAGCGCGCGCTTCGCAAGCCACCGTACTCA TGCACCTTGTGCTCTCTGTTGGTGACCTATATCTTGTGTTTTTTTTCCCT CGGTGTCTCAGAAAACGGAGCGGCACATATACCTTGTTTTAGAGTACTGC GCTGGGGGCGACCTCAGGGCGCTGATACGGAAGGAAGGGAAGCTGGCGGA GACGTCTGCGAGGCACTTCATGCGCCACCTAGGTACGGTATAAATTGCCT CTTTTGCTTGCTCCACCGTCGCTGCTGCACGTCTCAAGAGCCTGGGGGGT GGGTGGGGGCTTTCGCTTGTGTCATTTCATCGCTTCGTGCCCGAAAAGGA GAGGCGAAGCGTTTTGTCGCTTTGTTTTCTGGAGGTCGCGGAAGATGTAC GCCGGCGTACGAGAGGGCCGAGGTCCGAGGCATACAAGGCCGCACGTCTC TTTGTGTCGTGTGTTTTCCGCGTTTTTGGAGGGATGCTTGTGTACGGTGT GTTGCAGTGCCGTATGTCGCCATGTCAAGGAAAACAGGACCGTGGGTCCG CCCTCGCCCGGTGTTTCCGCTGGCGACAACGAATGCATAACTGGTGGTCC GTGCGGTTATGGTTCGCCGAAACACACGAAGAGTTTCAACGGGAGTAACA GCGGCAGCGGTGTTATGACGGCAGCCGGTTGACGAAGCCGTGTGCCCGAC GGCGTCCTACGATGCGGTGGTTGGGGAAACAAGCCGTCCGTAGATGTTGC ACTGTTTTCGTGCCCTGGATGGATCACTACGCAGCAGCAGAGTCAGCCTT GCTCCATCCGCTCTTCCCCCATCCTTGATTGTTCTCACAAAGCTACTCTC AACCCCCCGCTCCCTCCTACCGCGTCTGCGGTGCCCCCCTTGCCCACAGG CTCAGGGCTTCACTTCCTGTGGTCGAAGAACCTCGTCCACCGGGATCTCA AGCCCCAAAACCTGCTGCTCTCGGGACCCAGCCTAGACGCCACGTTAAAG ATCGCCGACTTCGGCTTCGCCCGGCACTTGGCGCAGGCCTCCATGGCGGA GACCATCTGCGGGTCCCCCCTTTACATGGTGAGTTGAGTTCGTCAGCCCG AGCCGAAGCAGGGCTGTTTTTTGCTTGCGCGGCAAGGCTGGAGCCGGGAG GTCTCGCGCGTAGTGCTTTTTTTTTCGTCCCCGGGTTTCTTCTCCTCCTG TTTATCAATGAGTTCAAGCAGAAGGAGACGGTCATGTTCAAGCGCGAACA CGTGTTGGCAGGGCTGTTTTCATCGACGAGATGCACACGCAGCACGGTAG GTGTGTTTGGGTATCACGCACGGTGGTCGACTCCACGAGCAAGGGCTTGG CTTGTCTCTTCCTTTCCTCGGCTTGTGTCCTGGTTCCGTGTGCCCGACGT GACGCCGTGGAGGTCTCGGCTGCTACTATTGTGTCTTGCGTCTGATCTCT GTGTGTGAGGCGCCGGTGGCCTTTCCCAGGGGCCAGCGGAACGTGTTTTT ACGCGCGGTGCGGGACTGCTGTGATTGAAACCATCGCGCTGTGATTGAAA CCATGGCGGTAGGTAGTTTCTTTTTTGTTGTTGTGCCCCTCCCAGTAGTT GACTACTTACGATACCATGTCAATTTGATTCGCCAATCATTGGCGTGGAG GTGGTTCTCAGATATTTCCTGCACAAGAACTTGGCATTTTCTTTCTTCGC GGGACTATTCTAAGTGCAGTATTCGATCGTGTTTCCGAGGCTACGCAACG AGACGCGCGGCCCACCCGTTGCAGCCGAAGCACGACGCCCCCCGTACACG CAGACGTCCGCGCGCGCCTACACGCCTTGTTTGTTTAGCACCCCCAACTC CACCTCCACCCGGTCCCCTTCTACCTTTGTCGAGAACACGACGGCGCACT GACTCCCGATGCGGCAACTCTCTTATCTCGTCTTCTCTTCTCTTCTCTTC TCTTCTCATGTCATATCATGCCTTGTCTTGTCTTGTCGTTTCTTCTCTTC TCTTCTCTTCTTGACAAGGCCCCGGAAATTCTCCAGGGGCACAAGTACGG CGCAAAGGCGGACCTTTGGAGCGTAGGGGCGATCTTGTTCGAGATGTTGG CCGGCAAGCCGCCGTTTGGGGGCCAAAATCAGGTTGGTTCTAGCCCTCTC TCGGCGCTCTTTCTTTTTGGGAGTAAGTTACCCGTGCTGTTCCTTGATTT TTTTTGTGTCCGATATAAAAGTGGAGGTCCGAGCGTGCGATCGCTCCCGG AGATGCCGTTGGCGTGAAAAAAGTTGCACTCACGACACGCACAATGTGAC GGCTTTTCTCATTTGAAGCAAGCAACGTGCGTCTGTGTTCCCGCGCCGAA AACGTGAGGCAATTTTCGTGTGCGCGGAGATTTTGAAACGGCAAGCCGAC AGTAGTAGAATAGCACAGAGCAACCAAAGTAATGAGCTTCCACACACATC GGGAAAACCTCGGTGTAGGGAAGGCGAAACCGATCGGTCACCGGAGTTCG TGCCCGACAGGATACTGGGCCGTGAACGTCCTCTTTCCTGTGACGGAACA TGCCATCAAACTGCGCCGCCACATGGTGTAATTTTTACAAATCGTATCAC TGCGGTTAGACCCTCAGTGTAAGGCATAGACTCAACTATGACCACGGGCT GGAGTAAACGGCACAAGCGCTGTGAGCGCTGATTTGAAGCGAAGAAAAAA AAAACGAAAACAGTCGGTTTCTCTCCCACGTCCTCTGTAATGACTTGAAC TCATTCCCTTCGACTAAGATTATACGTATATTTCGAACGGATATTTCGTT CTTTTTCATGCAAATTTTCGAAAATTCGAAACACCAGATCCAGCTACTGG CCAACATCCGTCGAGGCCCGAGCCCGCCCGCCCGGGACGGCTTCTACCCG CTGCCCGACGGCGTGCCACGACCGGGCCGCTCCTGCAACGAGCTCCTGTG CCGCCTCCTGGTGCCCGACCCGCAGCAGCGCGCGTCGTTCAGGGAGTTCT TCAATAGCGACGTTTTGCGCTCTCCTTCGTCGTTGTCGTCGTCGGCCGCG GCGGCGGCGGATGGCAGCGGCGCCACCGCTGTAGCCGCGGGCCGCGGGGC TGCGGAAGTTGGTCGAAGGGAATCGTCCGCGACGGATCGAACGGTTTCTG GGGGTGGTGGTGGTGGTGGTGGCGGAAGCGCGCGGAACGTTACCGAGGGG GATGCTTTCGCGGCATCGGGAGCTGCGGCGGCGGCGGCGGCGGCGGCCTA CTCCGCCGGAGCGCAGCAGCAGCAGCAGCATCACCAGACCGCCGCAAGCC AGCCGCGAGGGGGGAGAGGAGTCCAAAGGTCGCCGCCCGGAGCCCTGGGC GTGGCGGCGGGGGCGGGAAGAAATCGCGCGCAGCAGCAGGACCAAGG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig143:2974..8120+

>mRNA_Ecto-sp13_S_contig143.3336.1 ID=mRNA_Ecto-sp13_S_contig143.3336.1|Name=mRNA_Ecto-sp13_S_contig143.3336.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1131bp|location=Sequence derived from alignment at Ecto-sp13_S_contig143:2974..8120+ (Ectocarpus species13 EcNAP12_S_4_19m)
GTGTTCCTTGCTCGTCAGCGGGAAACGGGGAGGGAGTTCGCGATGAAAGC
CATCAGTCGCGCTCGTGTGCAGGGAAAACTCCAAGAGAACCTGGAGTCGG
AGATTTCGATCCTCAAGAGCTTCCGTCACGGCAACATCGTCGAGCTCTAC
GACATCAAGAAAACGGAGCGGCACATATACCTTGTTTTAGAGTACTGCGC
TGGGGGCGACCTCAGGGCGCTGATACGGAAGGAAGGGAAGCTGGCGGAGA
CGTCTGCGAGGCACTTCATGCGCCACCTAGGCTCAGGGCTTCACTTCCTG
TGGTCGAAGAACCTCGTCCACCGGGATCTCAAGCCCCAAAACCTGCTGCT
CTCGGGACCCAGCCTAGACGCCACGTTAAAGATCGCCGACTTCGGCTTCG
CCCGGCACTTGGCGCAGGCCTCCATGGCGGAGACCATCTGCGGGTCCCCC
CTTTACATGGCCCCGGAAATTCTCCAGGGGCACAAGTACGGCGCAAAGGC
GGACCTTTGGAGCGTAGGGGCGATCTTGTTCGAGATGTTGGCCGGCAAGC
CGCCGTTTGGGGGCCAAAATCAGATCCAGCTACTGGCCAACATCCGTCGA
GGCCCGAGCCCGCCCGCCCGGGACGGCTTCTACCCGCTGCCCGACGGCGT
GCCACGACCGGGCCGCTCCTGCAACGAGCTCCTGTGCCGCCTCCTGGTGC
CCGACCCGCAGCAGCGCGCGTCGTTCAGGGAGTTCTTCAATAGCGACGTT
TTGCGCTCTCCTTCGTCGTTGTCGTCGTCGGCCGCGGCGGCGGCGGATGG
CAGCGGCGCCACCGCTGTAGCCGCGGGCCGCGGGGCTGCGGAAGTTGGTC
GAAGGGAATCGTCCGCGACGGATCGAACGGTTTCTGGGGGTGGTGGTGGT
GGTGGTGGCGGAAGCGCGCGGAACGTTACCGAGGGGGATGCTTTCGCGGC
ATCGGGAGCTGCGGCGGCGGCGGCGGCGGCGGCCTACTCCGCCGGAGCGC
AGCAGCAGCAGCAGCATCACCAGACCGCCGCAAGCCAGCCGCGAGGGGGG
AGAGGAGTCCAAAGGTCGCCGCCCGGAGCCCTGGGCGTGGCGGCGGGGGC
GGGAAGAAATCGCGCGCAGCAGCAGGACCAA
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