mRNA_Ecto-sp13_S_contig14263.3308.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
|
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig14263.3308.1 vs. uniprot
Match: A0A6H5KSV7_9PHAE (FAD_binding_3 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSV7_9PHAE) HSP 1 Score: 465 bits (1197), Expect = 3.560e-164 Identity = 235/245 (95.92%), Postives = 238/245 (97.14%), Query Frame = 1
Query: 16 MRDRLMQILAGGLPSGVVSTGREVTLVEESPSGATLRFADGSAEGPFDLVVGADGIKGAARKAVRAGPGGGTGGGNDDAIYSGIRIQYGVAPAGQRPEGSEREVHQWFGGDTYGLSATYQGIGDKKFEMVAAVYQDRDRKEENAVWDQVEAKGACLRRLDERGFPQEMRALAEASDRFYELGVYYRNPLEGWVSRGEGQVVLLGDAAHAMPPNLGQGANQAIQDAYCLAGRLGHLQSGGSFEGSL 750
MRDRLMQILAGGLPSGVVST REVT VEESPSGATLRFADGSAEGPFDLVVGADGIKGAARKAVRAGPGGG+GGGNDDAIYSGIRIQYGVA AGQRPEGSERE+HQWFGGDTYGLSATYQGIGDKKFEMVAAVYQDRDRKEENAVWDQVEAKGACLRRLDERGFPQEMRALAEASDRFYELGVYYRNPLEGWVSRGEGQVVLLGDAAHAMPPNLGQGANQAIQDAYCLAGRL L SG +FEGSL
Sbjct: 1 MRDRLMQILAGGLPSGVVSTSREVTSVEESPSGATLRFADGSAEGPFDLVVGADGIKGAARKAVRAGPGGGSGGGNDDAIYSGIRIQYGVALAGQRPEGSERELHQWFGGDTYGLSATYQGIGDKKFEMVAAVYQDRDRKEENAVWDQVEAKGACLRRLDERGFPQEMRALAEASDRFYELGVYYRNPLEGWVSRGEGQVVLLGDAAHAMPPNLGQGANQAIQDAYCLAGRLADLNSGAAFEGSL 245
BLAST of mRNA_Ecto-sp13_S_contig14263.3308.1 vs. uniprot
Match: D8LRC6_ECTSI (Monooxygenase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRC6_ECTSI) HSP 1 Score: 461 bits (1185), Expect = 1.420e-159 Identity = 232/249 (93.17%), Postives = 238/249 (95.58%), Query Frame = 1
Query: 4 LFTIMRDRLMQILAGGLPSGVVSTGREVTLVEESPSGATLRFADGSAEGPFDLVVGADGIKGAARKAVRAGPGGGTGGGNDDAIYSGIRIQYGVAPAGQRPEGSEREVHQWFGGDTYGLSATYQGIGDKKFEMVAAVYQDRDRKEENAVWDQVEAKGACLRRLDERGFPQEMRALAEASDRFYELGVYYRNPLEGWVSRGEGQVVLLGDAAHAMPPNLGQGANQAIQDAYCLAGRLGHLQSGGSFEGSL 750
LFTIMRDRLMQILAGGLPSGVVST REVT VEESPSGA LRFADGS EGPFDLVVGADGIKGAARKAVRAGPGGG+GG NDDAIYSGIR+QYGVAPAGQRPEGSERE+HQWFGGDTYGLSATYQGIGDKKFEMVAA+YQDRDRKEENAVWDQVEAKGACLRRLDER FP+EMRALAEASDRFYELGVYYRNPLEGWVSRGEGQVVLLGDAAHAMPPNLGQGANQAIQDAYCLA RL L SG +FEGSL
Sbjct: 181 LFTIMRDRLMQILAGGLPSGVVSTSREVTSVEESPSGAKLRFADGSTEGPFDLVVGADGIKGAARKAVRAGPGGGSGGDNDDAIYSGIRVQYGVAPAGQRPEGSERELHQWFGGDTYGLSATYQGIGDKKFEMVAALYQDRDRKEENAVWDQVEAKGACLRRLDERRFPREMRALAEASDRFYELGVYYRNPLEGWVSRGEGQVVLLGDAAHAMPPNLGQGANQAIQDAYCLARRLADLNSGAAFEGSL 429
BLAST of mRNA_Ecto-sp13_S_contig14263.3308.1 vs. uniprot
Match: A0A836CJN1_9STRA (Monooxygenase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJN1_9STRA) HSP 1 Score: 239 bits (611), Expect = 1.260e-73 Identity = 132/244 (54.10%), Postives = 167/244 (68.44%), Query Frame = 1
Query: 1 QLFTIMRDRLMQILAGGLPSGVVSTGREVTLVEESPSGATLRFADGSA-EGPFDLVVGADGIKGAARKAVRAGPGGGTGGGNDDAIYSGIRIQYGVAPAGQRPEGSEREVHQWFGGDTYGLSATYQGIGDKKFEMVAAVYQDRDRKEENAVWDQVEAKGACLRRLDERGFPQEMRALAEASDRFYELGVYYRNPLEGWVSRGEGQVVLLGDAAHAMPPNLGQGANQAIQDAYCLAGRLGHLQSG 729
+ + IMRDRL Q+L LP G + G+EVT +E++ G +LRF DGSA + P+D+VVGADGI GA + AV G A+ SG+RIQ GV AG RP G++ E+HQWFGG+TY L+ATY GIG K EM+A VYQDR EN W + + RL+ER FPQE+ +A+ DRF+++GV YRNPL W S +G++VLLGD+AHAMPP LGQGANQAIQDAYCLA RL L+ G
Sbjct: 137 KFYAIMRDRLQQMLLAQLPDGCLQLGKEVTNLEQTDKGVSLRFRDGSASQRPYDMVVGADGIAGAVKAAVS--------GTETPAVDSGLRIQLGVG-AGNRPSGADSELHQWFGGNTYALTATYGGIGGKS-EMIAIVYQDRKPMGENIGWQTADVTQDAVTRLEERCFPQEVVNVAKGCDRFFQVGVRYRNPLTKWSST-DGRMVLLGDSAHAMPPTLGQGANQAIQDAYCLAERLQALKRG 369
BLAST of mRNA_Ecto-sp13_S_contig14263.3308.1 vs. uniprot
Match: A0A7S1UMX4_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UMX4_9STRA) HSP 1 Score: 212 bits (539), Expect = 5.700e-63 Identity = 116/244 (47.54%), Postives = 150/244 (61.48%), Query Frame = 1
Query: 7 FTIMRDRLMQILAGGLPSGVVSTGREVTLVEESPSGAT-LRFADGSAEGPFDLVVGADGIKGAARKAVRAGPGGGTGGGNDDAIYSGIRIQYGVAPAGQRPEGSEREVHQWFGGDTYGLSATYQGIGDKKFEMVAAVYQDRDRKE--ENAVWDQVEAKGACLRRLDERGFPQEMRALAEASDRFYELGVYYRNPLEGWVSRGEGQVVLLGDAAHAMPPNLGQGANQAIQDAYCLAGRLGHLQSG 729
+ +MRD L ++L L + V G++V + E G L FA+G A G FDLV+ ADGI+ +A A G AIYSG RIQYGV P +RP G + HQWFG Y L ATY G G + +MVA V++D ENA WD + +G C+RRL P+E+ ALAEA++RF+ELGVY+ P W + +G+VVL+GDAAHAMPP LGQGANQA+QDAYCLA L + +G
Sbjct: 125 YAVMRDALQRMLRRSLRTSRVELGKDVQRIVEGADGKVGLEFANGEASGGFDLVIAADGIRAGVLEAAGAAAGA--------AIYSGKRIQYGVIPEAKRPPGEQSAFHQWFGKGVYSLCATYGGEGGARSDMVALVFRDDGGSAAGENADWDAADIRGDCVRRLRAAAMPEEVVALAEAAERFFELGVYFHLPRPSWRAGSKGRVVLMGDAAHAMPPFLGQGANQAVQDAYCLAAALRDVNAG 360
BLAST of mRNA_Ecto-sp13_S_contig14263.3308.1 vs. uniprot
Match: A0A812I7S9_9DINO (PrhF protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812I7S9_9DINO) HSP 1 Score: 208 bits (529), Expect = 9.090e-61 Identity = 121/234 (51.71%), Postives = 150/234 (64.10%), Query Frame = 1
Query: 10 TIMRDRLMQILAGGLPSGVVSTGREVTLVEESPSG--ATLRFADGSAEGPFDLVVGADGIKGAARKAVRAGPGGGTGGGNDDAIYSGIRIQYGVAPAGQRPEGSEREVHQWFGGDTYGLSATYQGIGDKKFEMVAAVYQDRDRKEENAVWDQVEAKGACLRRLDERGFPQEMRALAEASDRFYELGVYYRNP-LEGWVSRGEGQVVLLGDAAHAMPPNLGQGANQAIQDAYCLA 702
T+MRD L++ +A LPSG + GR++ V+ SP G AT RF G + FDLVV ADGI +AR+ V G + Y+G+RIQYGV AG RP G E E HQWFG Y L+ATY G+G K+FEM+A V+++ ENA WD VE K +CL+RL E G P E+ +AE RF+ELGV+ R L W +VVLLGD+AHAMPP LGQGANQAIQDA CLA
Sbjct: 194 TVMRDALLEAMAKSLPSGSIRLGRKLLDVQMSPGGQSATCRFEAGQED--FDLVVAADGIGSSARRFVLD-----EGDQEEAPRYTGLRIQYGVREAGGRPAGCEEEAHQWFGQGVYALTATYGGLGGKRFEMMAVVFREDAPAAENADWDPVEIKDSCLQRLREAGHPAEVMEVAEGCSRFFELGVFERPVGLSNW---HRDRVVLLGDSAHAMPPFLGQGANQAIQDAVCLA 417
BLAST of mRNA_Ecto-sp13_S_contig14263.3308.1 vs. uniprot
Match: A0A7S2RL63_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RL63_9STRA) HSP 1 Score: 206 bits (523), Expect = 1.850e-60 Identity = 120/248 (48.39%), Postives = 156/248 (62.90%), Query Frame = 1
Query: 7 FTIMRDRLMQILAGGLPSGVVSTGREVTLVEESPS--GATLRFADGSAEGPFDLVVGADGIKGAARKAVRAGPGGGTGGGNDDA--IYSGIRIQYGVAPA-GQRPEGSEREVHQWFGGDTYGLSATYQGIGDKKFEMVAAVYQDRDRKEENAVWDQVEAKGACLRRLDERGFPQEMRALAEASDRFYELGVYYRNPLEGWV-------SRGEGQVVLLGDAAHAMPPNLGQGANQAIQDAYCLAGRLG 714
FTIMRD L+++LA LP G+V G+ + +E S G F D S E FDLVVG DGI+ A R+ V G ND A YSG+RI++GVAP+ G R GS E+HQWF Y L+ATY G+G ++++M+A D++ NA WD E + R L++ GFP E+ ++AE+S RF+++GV ++NPL WV +RG VLLGDAAHAMPP LGQGANQAIQDAYCLA LG
Sbjct: 130 FTIMRDELLRMLAARLPEGMVRYGKRLEGLERSDGEEGIQCTFDDASTE-TFDLVVGCDGIRSAVREWVLEG--------NDGARETYSGLRIRFGVAPSCGGRGAGSREEMHQWFADGAYALTATYGGVGGEEYDMIALTTTDKNEVGPNANWDSSEVQQDTCRILNDLGFPGEVLSIAESSTRFFDIGVRFQNPLLPWVRSDGNFWTRGSAAAVLLGDAAHAMPPFLGQGANQAIQDAYCLAEELG 368
BLAST of mRNA_Ecto-sp13_S_contig14263.3308.1 vs. uniprot
Match: A0A812YRU2_9DINO (ZEP protein n=1 Tax=Symbiodinium sp. CCMP2592 TaxID=631055 RepID=A0A812YRU2_9DINO) HSP 1 Score: 203 bits (516), Expect = 6.540e-59 Identity = 125/255 (49.02%), Postives = 154/255 (60.39%), Query Frame = 1
Query: 10 TIMRDRLMQILAGGLPSGVVSTGREVTLVEESPSG--ATLRFADGSAEGPFDLVVGADGIKGAARKAVRAGPGGGTGGGNDDAI--YSGIRIQYGVAPAGQRPEGSEREVHQWFGGDTYGLSATYQGIGDKKFEMVAAVYQDRDRKEENAVWDQVEAKGACLRRLDERGFPQEMRALAEASDRFYELGVYYRNP-LEGWVSRGEGQVVLLGDAAHAMPPNLGQGANQAIQDAYCLAG---RLGHLQSGGSFEGSL 750
T+MRD L++ +A LP G + G ++ VE + G AT RF G E FDLVV ADGI AR V G D+ Y+G+RIQYGV AG RP G E EVHQWFG Y L+ATY GIG K+FEM+A V+++ ENA WD E K +CL+RL + G E+ +A+ +RF+ELGV+ R L W G+VVLLGD+AHAMPP LGQGANQAIQDA CLA R+G GS E L
Sbjct: 190 TVMRDALLEAMARELPPGSIRLGTKLLDVETNSDGQAATCRFESGEEE--FDLVVAADGIGSRARSCVL--------GEEDEEAPRYTGLRIQYGVREAGGRPAGCEEEVHQWFGQGVYALTATYGGIGGKRFEMMAVVFREEAPAAENADWDPAEIKDSCLQRLQQAGHAGEVLEVAKGCERFFELGVFERPVGLNRW---HRGRVVLLGDSAHAMPPFLGQGANQAIQDAVCLARWLRRVGFADGPGSLEAGL 431
BLAST of mRNA_Ecto-sp13_S_contig14263.3308.1 vs. uniprot
Match: A0A7S2XFF1_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2XFF1_9EUKA) HSP 1 Score: 199 bits (506), Expect = 1.040e-58 Identity = 115/245 (46.94%), Postives = 149/245 (60.82%), Query Frame = 1
Query: 7 FTIMRDRLMQILAGGLPSGVVSTGRE-VTLVEESPSGAT-LRFADGSAEGPFDLVVGADGIKGAARKAVRAGPGGGTGGGNDDAIYSGIRIQYGVAPAGQRPEGSEREVHQWFGGDTYGLSATYQGIGDKKFEMVAAVYQDRDRKE--ENAVWDQVEAKGACLRRLDERGFPQEMRALAEASDRFYELGVYYRNPLEGWVSRGEGQVVLLGDAAHAMPPNLGQGANQAIQDAYCLAGRLGHLQSG 729
FTIMRD L ++LA L G + T + V L + P+G L F DG+ E D+V+GADGI+ +K GPG D Y+ IRIQ+GVA +R +E+HQWF TY LS Y+G+ K FEM A V+ D + E EN+ W+ E K CLRRL E G P+E+ L + +RF+E+GV+Y L W S G+ VL+GDAAHAMPP LGQGANQAIQDA+CL +L L+SG
Sbjct: 61 FTIMRDSLQKVLADSLDEGTIQTNKRLVGLKHDEPTGGVRLTFEDGTEE-LVDMVIGADGIRSTVKKETFPGPG-------RDPTYANIRIQFGVAEGWERAPEYAQELHQWFSEGTYALSGQYRGLEGKPFEMFALVFADDNDSEDAENSKWEPNEVKQDCLRRLSETGQPKEVVELCQRCERFFEIGVFYYPSLNPWTSPS-GKTVLIGDAAHAMPPFLGQGANQAIQDAFCLGQKLSELKSG 296
BLAST of mRNA_Ecto-sp13_S_contig14263.3308.1 vs. uniprot
Match: R1CJR6_EMIHU (Hypothetical protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1CJR6_EMIHU) HSP 1 Score: 201 bits (511), Expect = 1.600e-58 Identity = 123/251 (49.00%), Postives = 152/251 (60.56%), Query Frame = 1
Query: 1 QLFTIMRDRLMQILAGGLPSGVVSTGREVTLVEESPSGATLRFADGSAEGPFDLVVGADGIKGAARKAVRAGPGGGTGGGNDDAIYSGIRIQYGVAPAG-QRPEGSEREVHQWFGGDTYGLSATY-QGIGD-KKFEMVAAVYQDRDRKE----ENAVWDQVEAKGACLRRLDERGFPQEMRALAEASDRFYELGVYYRNPLEGWVSRGEGQVVLLGDAAHAMPPNLGQGANQAIQDAYCLAGRLGHLQSGG 732
Q F+IMRD L +ILA LP G V G+ + + E +G L F G+AE FDLVVGADG+ R+ V A GGG YSGIR+Q+GV PAG RP GSE E HQWFG Y L+ +Y G D +MVA V+ DR EN+ W+ + + C+ RL G P E+ ++AE +R +ELGVY + WVSRG G+ VLLGDAAHAM P LGQGANQAIQD YCLA RL ++GG
Sbjct: 135 QAFSIMRDALQRILADSLPVGTVRLGQRLESLREDDAGVELLFEGGAAE-RFDLVVGADGLSSRVREHVAASHAAEGGGGATPPEYSGIRVQFGVVPAGGARPAGSEGEFHQWFGEGVYALTGSYGTGAADGATSDMVAVVFADRAAGSAAPPENSNWEASDVREDCVGRLRRAGIPAEVVSVAEQCERCFELGVYEHDATAPWVSRG-GRAVLLGDAAHAMAPFLGQGANQAIQDGYCLADRLAAARAGG 383
BLAST of mRNA_Ecto-sp13_S_contig14263.3308.1 vs. uniprot
Match: A0A812IQC8_SYMPI (ZEP protein n=1 Tax=Symbiodinium pilosum TaxID=2952 RepID=A0A812IQC8_SYMPI) HSP 1 Score: 200 bits (508), Expect = 9.320e-58 Identity = 124/255 (48.63%), Postives = 153/255 (60.00%), Query Frame = 1
Query: 10 TIMRDRLMQILAGGLPSGVVSTGREVTLVEESPSG--ATLRFADGSAEGPFDLVVGADGIKGAARKAVRAGPGGGTGGGNDDAIYSGIRIQYGVAPAGQRPEGSEREVHQWFGGDTYGLSATYQGIGDKKFEMVAAVYQDRDRKEENAVWDQVEAKGACLRRLDERGFPQEMRALAEASDRFYELGVYYRNP-LEGWVSRGEGQVVLLGDAAHAMPPNLGQGANQAIQDAYCLAGRLGHLQ-----SGGSFEGSL 750
T+MRD L++ +AG LP + ++ V+ G AT RF G E FDLVV ADGI AR V G G ++ Y+G+RIQYGV AG RP G E EVHQWFG Y L+ATY GIG K+FEM+A V+++ ENA WD E K +CL RL G P+E+ +A +RF+ELGV+ R L W +VVLLGD+AHAMPP LGQGANQAIQDA CLA L + SGGS E +L
Sbjct: 184 TVMRDALLEAMAGALPDDSIRLSTKLLEVQTGAQGQSATCRFDSGQEE--FDLVVAADGIGTRARSFVF-----GEEGQEEEPRYTGLRIQYGVREAGGRPAGCEEEVHQWFGQGVYALTATYGGIGGKRFEMMAVVFREEAPVAENADWDPAEIKDSCLERLRSAGQPEEVLQVAAGCERFFELGVFERPVGLNRW---HRDRVVLLGDSAHAMPPFLGQGANQAIQDAVCLARWLRRVNFAKEASGGSLETAL 428 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14263.3308.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig14263.3308.1 >prot_Ecto-sp13_S_contig14263.3308.1 ID=prot_Ecto-sp13_S_contig14263.3308.1|Name=mRNA_Ecto-sp13_S_contig14263.3308.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=245bp MRDRLMQILAGGLPSGVVSTGREVTLVEESPSGATLRFADGSAEGPFDLVback to top mRNA from alignment at Ecto-sp13_S_contig14263:1..4119- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig14263.3308.1 ID=mRNA_Ecto-sp13_S_contig14263.3308.1|Name=mRNA_Ecto-sp13_S_contig14263.3308.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4119bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14263:1..4119- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig14263:1..4119- >mRNA_Ecto-sp13_S_contig14263.3308.1 ID=mRNA_Ecto-sp13_S_contig14263.3308.1|Name=mRNA_Ecto-sp13_S_contig14263.3308.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=735bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14263:1..4119- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |