mRNA_Ecto-sp13_S_contig1426.3303.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1426.3303.1 vs. uniprot
Match: A0A6H5KCI8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCI8_9PHAE) HSP 1 Score: 506 bits (1302), Expect = 1.190e-177 Identity = 254/278 (91.37%), Postives = 259/278 (93.17%), Query Frame = 1
Query: 16 GGQTGREGDAAEPPPSAAADDGEAQKGYFLSDESSFAENVMLAPCGQQTLVSLWDLRKARPSFTFAPKDAEQKGMVMCVRLLGESPSCASPFAVVGHDSGHLCVYDLRATSAEPLLESRLHKAPLLCVDVGSSCRQGVSGSADESINVFRLSTRKASCGSCDVVKSFHLEHPGTSCVEIRGDQKLFVSGGWDHRQAIHERQTFGWVLVRAFSWKTPRPLAVLRSHEKNVHTVAYSPRIGGLVSGSGDSRVAVWELYPERSRGGGGRGGGDDAIRDSRR 849
GGQTGREGDAAEP PSAAADDGEAQ+G FLSDESSFAENVMLAPCGQQTLVSLWDLRKARPSFTFAPKDAEQKGMVMCVRLLGESPSCASPFAVVGHD+GHLCVYDLRATSAEPLLESRLHK PLLCVDVGSSCRQGVSGSADESINVF LSTRKASCGSC+VVKSF LEHPGTSCVEIR DQKLFVSGGWDHR VRAFSWKTPRPLAVLRSHEKNVHTVAYSPRIGGLVSGSGDSRVAVWELYPER+RGGGGRGGGDDA+RDSRR
Sbjct: 175 GGQTGREGDAAEPAPSAAADDGEAQQGSFLSDESSFAENVMLAPCGQQTLVSLWDLRKARPSFTFAPKDAEQKGMVMCVRLLGESPSCASPFAVVGHDAGHLCVYDLRATSAEPLLESRLHKVPLLCVDVGSSCRQGVSGSADESINVFTLSTRKASCGSCEVVKSFRLEHPGTSCVEIRRDQKLFVSGGWDHR-------------VRAFSWKTPRPLAVLRSHEKNVHTVAYSPRIGGLVSGSGDSRVAVWELYPERNRGGGGRGGGDDAMRDSRR 439
BLAST of mRNA_Ecto-sp13_S_contig1426.3303.1 vs. uniprot
Match: D8LT91_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT91_ECTSI) HSP 1 Score: 303 bits (776), Expect = 4.050e-99 Identity = 156/166 (93.98%), Postives = 160/166 (96.39%), Query Frame = 1
Query: 1 ERSPPGGQTGREGDAAEPPPSAAA--DDGEAQKGYFLSDESSFAENVMLAPCGQQTLVSLWDLRKARPSFTFAPKDAEQKGMVMCVRLLGESPSCASPFAVVGHDSGHLCVYDLRATSAEPLLESRLHKAPLLCVDVGSSCRQGVSGSADESINVFRLSTRKASCG 492
ERSPP GQTGREG+AAEP PSAAA +DGEAQ+G FLSDESSFAENVMLAPCGQQTLVSLWDLRKARPSFTFAPKDAEQKGMVMCVRLLGESPSCASPFAVVGHD+GHLCVYDLRATSAEPLLE RLHKAPLLCVDVGSSCRQGVSGSADESINVFRLSTRKASCG
Sbjct: 170 ERSPPCGQTGREGEAAEPAPSAAAAANDGEAQQGSFLSDESSFAENVMLAPCGQQTLVSLWDLRKARPSFTFAPKDAEQKGMVMCVRLLGESPSCASPFAVVGHDAGHLCVYDLRATSAEPLLEMRLHKAPLLCVDVGSSCRQGVSGSADESINVFRLSTRKASCG 335
BLAST of mRNA_Ecto-sp13_S_contig1426.3303.1 vs. uniprot
Match: A0A2G9HCA9_9LAMI (G-protein beta subunit-like protein GNB1L n=1 Tax=Handroanthus impetiginosus TaxID=429701 RepID=A0A2G9HCA9_9LAMI) HSP 1 Score: 127 bits (319), Expect = 7.180e-31 Identity = 73/211 (34.60%), Postives = 108/211 (51.18%), Query Frame = 1
Query: 160 TLVSLWDLRKARPSFTFAPKDAEQKGMVMCVRLLGESPSCASPFAVVGHDSGHLCVYDLRATSAEPLLESRLHKAPLLCVDVGSSCRQGVSGSADESINVFRLSTRKASCGSCDVVKSFHLEHPGTSCVEIRGDQKLFVSGGWDHRQAIHERQTFGWVLVRAFSWKTPRPLAVLRSHEKNVHTVAYSPRIGGLVSGSGDSRVAVWELYPER 792
++V +WD+ A + + GM M VR S S + G++ G + +DLR A P+ + H P++ + + SSC+ GVSGSADE I +F+L S GSC V K LE PG + IR D K+F + GWDHR VR + ++ LA+L+ H + V++S G + S S D+ VA+WELYP +
Sbjct: 150 SVVEIWDVNTAEKLIKLSHSSTKSSGMCMAVRAFLPSESEGYVNVMSGYEDGSMVWWDLR-NPALPVSRVKFHSEPVVSLCIDSSCKGGVSGSADEKIVMFKLDP---SIGSCLVKKEIILERPGVAGTSIRPDGKIFATAGWDHR-------------VRIYDYRKGNALAILKYHHATCNAVSFSANSGLMASSSEDATVALWELYPPK 343
BLAST of mRNA_Ecto-sp13_S_contig1426.3303.1 vs. uniprot
Match: A0A6P5AZL2_BRABE (guanine nucleotide-binding protein subunit beta-like protein 1 isoform X1 n=1 Tax=Branchiostoma belcheri TaxID=7741 RepID=A0A6P5AZL2_BRABE) HSP 1 Score: 116 bits (290), Expect = 7.660e-27 Identity = 78/236 (33.05%), Postives = 118/236 (50.00%), Query Frame = 1
Query: 94 GYFLSDESSFAENVMLAPCG-QQTLVSLWDLRKARPSFTFAPKDA-EQKGMVMCVRLLGESPSCASPFAVVGHDSGHLCVYDLRATSAEPLLESRLHKAPLLCVDVGSSCRQGVSGSADESINVFRLSTRKASCGSCDVVKSFHLEHPGTSCVEIRGDQKLFVSGGWDHRQAIHERQTFGWVLVRAFSWKTPRPLAVLRSHEKNVHTVAYSPRIGG----LVSGSGDSRVAVWELY 783
G+ + S +LA G Q V++ DLR +P F+ P + +GMVM ++ S S SP + ++ G + V+D++ L R H P+LC+D +G++GSAD + V+ T K G ++ L +PG SCV+IRGD+KL V+GGWDH L+R + WK +PLAVL H V V +S L +GS D R+++W +Y
Sbjct: 110 GFCQVEMFSHGTGRLLAAAGASQAEVAVMDLRSKKPVFSLQPAEGCSPQGMVMALKAA--SGSDCSPL-LAAYEDGSVAVWDVKQRQIVSHL--RAHTEPILCMDYDQEQGKGITGSADNKLIVW---TNKD--GQLATKQTVELSNPGLSCVKIRGDRKLVVTGGWDH-------------LIRLYGWKKMKPLAVLDYHTDTVQCVDFSDHENSVDRLLAAGSKDQRISLWSIY 322
BLAST of mRNA_Ecto-sp13_S_contig1426.3303.1 vs. uniprot
Match: A0A5A7RC52_STRAF (Transducin/WD40 repeat-like superfamily protein n=1 Tax=Striga asiatica TaxID=4170 RepID=A0A5A7RC52_STRAF) HSP 1 Score: 113 bits (282), Expect = 1.550e-25 Identity = 75/240 (31.25%), Postives = 118/240 (49.17%), Query Frame = 1
Query: 82 EAQKGYFLSDESSFAENVMLAPCGQQ-TLVSLWDLRKARPSFTFAPKDAEQKGMVMCVRLLGESPSCASPFAVV-GHDSGHLCVYDLRATSAEPLLESRLHKAPLLCVDVGSSCRQGVSGSADESINVFRLSTRKASCGSCDVVKSFHLEHPGTSCVEIRGDQKLFVSGGWDHRQAIHERQTFGWVLVRAFSWKTPRPLAVLRSHEKNVHTVAYSPRIGGLVSGSGDSRVAVWELYPERS 795
E Q+ +S N +A G+ ++V +WD+ A K + K MC+ + SP + +V G++ G + ++D+R T L + H P++ + V SSCR GVSGSAD+ I +F + G C V K LE PG + IR D K+F + GWDHR +R + ++ LAVL+ H + + V++S + S S D+ VA+WE+YP +S
Sbjct: 127 ENQRESEVSGSEDRTSNNYVALAGEDLSVVEIWDVDNAERLM----KLPQIKNSGMCMAVQAFSPLGNNNANIVSGYEDGSMALWDVRNTG-RALTFVKFHTEPIMSLCVDSSCRGGVSGSADDKIVIFTIDP---CAGLCLVKKEIVLERPGLAGTSIRADGKIFATAGWDHR-------------LRVYDYRRGNALAVLKYHHRTCNAVSFSDDCKLMASSSEDATVALWEIYPPKS 345
BLAST of mRNA_Ecto-sp13_S_contig1426.3303.1 vs. uniprot
Match: A0A8C5MBL9_9ANUR (G protein subunit beta 1 like n=1 Tax=Leptobrachium leishanense TaxID=445787 RepID=A0A8C5MBL9_9ANUR) HSP 1 Score: 112 bits (280), Expect = 2.170e-25 Identity = 72/235 (30.64%), Postives = 121/235 (51.49%), Query Frame = 1
Query: 100 FLSDESSFAENVMLAPCGQQ-TLVSLWDLRKARPSFTFAPKDAEQKGMVMCVRLLGESPSCASPFAVVGHDSGHLCVYDLRATSAEPLLESRLHKAPLLCVDVGSSCRQGVSGSADESINVFRLSTRKASCGSCDVVKSFHLEHPGTSCVEIRGDQKLFVSGGWDHRQAIHERQTFGWVLVRAFSWKTPRPLAVLRSHEKNVHTVAYS----PRIGGLVSGSGDSRVAVWELYPE 789
F + +LA G++ + V + DL + + P++ + GM M + L + S +SP +VG++ G + ++++ L S H P++ +D +GVSGSAD S+NV++L ++ + K+ + +PG S + +R D+K+ +GGWD+R VR FSWKT +PLAVL+ H+ VH V +S P L +GS D R+ +W +Y E
Sbjct: 111 FCKSSLLMTDPPLLAMPGKEGSQVQVLDLLSKKLVSSMNPEEGSRWGMAMSMHLW-QPVSGSSPMLLVGYEDGSVALWNVLQHRMVSRLAS--HTDPIMSLDFDCKQARGVSGSADNSLNVWKLDEQQ----NLKAYKTQMIVNPGISDIALRPDRKILATGGWDYR-------------VRIFSWKTMKPLAVLQYHKATVHAVCFSDHLKPEDRLLAAGSKDQRITLWSIYTE 325
BLAST of mRNA_Ecto-sp13_S_contig1426.3303.1 vs. uniprot
Match: A0A7I4BYJ9_PHYPA (Uncharacterized protein n=5 Tax=Physcomitrium patens TaxID=3218 RepID=A0A7I4BYJ9_PHYPA) HSP 1 Score: 111 bits (278), Expect = 4.580e-25 Identity = 76/231 (32.90%), Postives = 118/231 (51.08%), Query Frame = 1
Query: 109 DESSFAENVMLAPCGQQTL-VSLWDLRKARPSFTFAPKDAEQKGMVMCVRLL---GESPSCASPFAVVGHDSGHLCVYDLRATSAEPLLESRLHKAPLLCVDVGSSCRQGVSGSADESINVFRL-STRKASCGSCDVVKSFHLEHPGTSCVEIRGDQKLFVSGGWDHRQAIHERQTFGWVLVRAFSWKTPRPLAVLRSHEKNVHTVAYSPRIGGLVSGSGDSRVAVWELYP 786
D A +++A G T V +WD+ + +PKD+ GM M + ++ GE C V G++ G + ++D R +A PLL+S+ HK P+L + + G+SGSAD + +F ST K K F + G + +RGD K+F + GWDHR +I++ ++ +PLA L+ H++ V+ VA+S L SGS DS VA+W LYP
Sbjct: 114 DTRGAAGQILMAIAGNDTSKVEIWDITSGQRVQLLSPKDSSV-GMCMSLHMIFQSGEGDQCT---VVAGYEDGSMLMWDTRHPAA-PLLQSKQHKEPVLSLVLDGPGLGGISGSADGQLTLFSFNSTEKVYTPK----KKFEGQ-AGIGDIALRGDDKIFATSGWDHRVSIYD-------------YRRRKPLAFLKYHKEIVNGVAFSEDKKWLASGSKDSTVALWSLYP 321
BLAST of mRNA_Ecto-sp13_S_contig1426.3303.1 vs. uniprot
Match: A0A7N0UWK6_KALFE (Uncharacterized protein n=2 Tax=Kalanchoe fedtschenkoi TaxID=63787 RepID=A0A7N0UWK6_KALFE) HSP 1 Score: 111 bits (277), Expect = 1.460e-24 Identity = 74/237 (31.22%), Postives = 115/237 (48.52%), Query Frame = 1
Query: 115 SSFAENVMLAPCGQQ-TLVSLWDLRKARPSFTFAPK---------DAEQKGMVMCVRLLGESPSCASPFAVVGHDSGHLCVYDLRATSAEPLLESRLHKAPLLCVDVGSSCRQGVSGSADESINVFRLSTRKASCGSCDV-VKSFHLEHPGTSCVEIRGDQKLFVSGGWDHRQAIHERQTFGWVLVRAFSWKTPRPLAVLRSHEKNVHTVAYSPRIGGLVSGSGDSRVAVWELYPER 792
S+ + +A G+Q + + +WDL A+ T PK + +GM M V S S + G++ G +C +D+R A PLL + H P+L + + R G+SG+AD+ + +F L K C V K LE PG S + IR D K+ + GWDHR +R +++ PLA+L+ H + V++SP L S S D+ VA+W+LYP +
Sbjct: 168 SNCQRSEYVAIAGEQPSQIEIWDLNTAQ-KITCLPKHESNGSLHHSTKSRGMCMAVEAFIPSESQGFLHVLAGYEDGSICWWDVR-NPAFPLLSEKYHSEPVLSLCLDPLFRGGISGAADDRVEMFYLDHVKC----CFVHKKDIKLERPGISSISIRPDGKIAATAGWDHR-------------IRIYNYHQGNPLAILKYHHSLCNAVSFSPDSRLLASSSQDATVALWKLYPPK 385
BLAST of mRNA_Ecto-sp13_S_contig1426.3303.1 vs. uniprot
Match: A0A1B0D102_PHLPP (Uncharacterized protein n=1 Tax=Phlebotomus papatasi TaxID=29031 RepID=A0A1B0D102_PHLPP) HSP 1 Score: 105 bits (263), Expect = 4.870e-23 Identity = 72/241 (29.88%), Postives = 117/241 (48.55%), Query Frame = 1
Query: 82 EAQKGYFLSDESSFAENVMLAPCGQQTLVSLWDLRKARPSFTFAPKDAEQKGMVMCVRLLGESPSCASPFAVVG-HDSGHLCVYDLRATSAEPLLESRLHKAPLLCVDVGSSCRQGVSGSADESINVFRLSTRKASCGSCDVVKSFHLEHPGTSCVEIRGDQKLFVSGGWDHRQAIHERQTFGWVLVRAFSWKTPRPLAVLRSHEKNVHTVAYSP------RIGGLVSGSGDSRVAVWELY 783
E + G F + S +++L P G+ L + +LR P+ E G +M ++++ SC V+G +SGH +DLR + L +L + P+ +D S +G+ ++ I+VF + + +L++PG SC+ IR D+K+FVSGGWD R +R FSWK+ RPLAVL H+K++ VA+SP R + D ++ +W LY
Sbjct: 99 ETESGNFCRIDCSDERDLLLVPKGENHL-HIHNLRDLSLVMKLTPEGNENFGALMSIKIIDPDASC-----VLGAFESGHFVTWDLR--EGKVLSVKKLEECPM-ALDYDSLTNRGIYAGPNDKIHVFDYQRPQMLLHERSEI---NLKNPGVSCLRIRPDRKIFVSGGWDGR-------------IRVFSWKSLRPLAVLTEHKKSISDVAFSPGRVELWRAPLMAIAGEDRQITLWNLY 314
BLAST of mRNA_Ecto-sp13_S_contig1426.3303.1 vs. uniprot
Match: A0A1L8DM75_9DIPT (Putative g-protein beta subunit-like protein gnb1l (Fragment) n=2 Tax=Nyssomyia neivai TaxID=330878 RepID=A0A1L8DM75_9DIPT) HSP 1 Score: 106 bits (264), Expect = 5.240e-23 Identity = 74/242 (30.58%), Postives = 120/242 (49.59%), Query Frame = 1
Query: 82 EAQKGYFLSDESSFAENVMLAPCGQQTLVSLWDLRKARPSFTFAPKDAEQKGMVMCVRLLGESPSCASPFAVVG-HDSGHLCVYDLRATSAEPLLESRLHKAPLLCVDVGSSCRQGVSGSADESINVFRLSTRKASCGSCDVVKSFHLEHPGTSCVEIRGDQKLFVSGGWDHRQAIHERQTFGWVLVRAFSWKTPRPLAVLRSHEKNVHTVAYSPRIGGL-------VSGSGDSRVAVWELY 783
E + G F + S +++++ P G+ L + LR P P+ E G +M VR++ +P AV+G +SGH +D+R L ++L ++ L +D +G+ + I +F + + + L++PG SC+ IR D+K+FVSGGWD R VR FSWK+ RPLAVL H+KN+ +A+SP L ++G DS++ +W+LY
Sbjct: 127 ETESGNFCRIDCSDEKDLVVVPKGENHL-DVHSLRDLAPVLKLLPECEENVGALMSVRII-------NPHAVLGTFESGHFITWDIR--EGRVLSVAKLKES--LALDYDDLTNRGIYAGPGDRIGIFAFQKPQMTMQERSEIT---LKNPGVSCLRIRPDRKIFVSGGWDGR-------------VRVFSWKSLRPLAVLTEHKKNILDIAFSPGPVDLWKAPLMAIAGE-DSQITLWDLY 339 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1426.3303.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1426.3303.1 >prot_Ecto-sp13_S_contig1426.3303.1 ID=prot_Ecto-sp13_S_contig1426.3303.1|Name=mRNA_Ecto-sp13_S_contig1426.3303.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=284bp ERSPPGGQTGREGDAAEPPPSAAADDGEAQKGYFLSDESSFAENVMLAPCback to top mRNA from alignment at Ecto-sp13_S_contig1426:2..3525+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1426.3303.1 ID=mRNA_Ecto-sp13_S_contig1426.3303.1|Name=mRNA_Ecto-sp13_S_contig1426.3303.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3524bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1426:2..3525+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1426:2..3525+ >mRNA_Ecto-sp13_S_contig1426.3303.1 ID=mRNA_Ecto-sp13_S_contig1426.3303.1|Name=mRNA_Ecto-sp13_S_contig1426.3303.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=852bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1426:2..3525+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |