mRNA_Ecto-sp13_S_contig1426.3303.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig1426.3303.1
Unique NamemRNA_Ecto-sp13_S_contig1426.3303.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig1426.3303.1 vs. uniprot
Match: A0A6H5KCI8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCI8_9PHAE)

HSP 1 Score: 506 bits (1302), Expect = 1.190e-177
Identity = 254/278 (91.37%), Postives = 259/278 (93.17%), Query Frame = 1
Query:   16 GGQTGREGDAAEPPPSAAADDGEAQKGYFLSDESSFAENVMLAPCGQQTLVSLWDLRKARPSFTFAPKDAEQKGMVMCVRLLGESPSCASPFAVVGHDSGHLCVYDLRATSAEPLLESRLHKAPLLCVDVGSSCRQGVSGSADESINVFRLSTRKASCGSCDVVKSFHLEHPGTSCVEIRGDQKLFVSGGWDHRQAIHERQTFGWVLVRAFSWKTPRPLAVLRSHEKNVHTVAYSPRIGGLVSGSGDSRVAVWELYPERSRGGGGRGGGDDAIRDSRR 849
            GGQTGREGDAAEP PSAAADDGEAQ+G FLSDESSFAENVMLAPCGQQTLVSLWDLRKARPSFTFAPKDAEQKGMVMCVRLLGESPSCASPFAVVGHD+GHLCVYDLRATSAEPLLESRLHK PLLCVDVGSSCRQGVSGSADESINVF LSTRKASCGSC+VVKSF LEHPGTSCVEIR DQKLFVSGGWDHR             VRAFSWKTPRPLAVLRSHEKNVHTVAYSPRIGGLVSGSGDSRVAVWELYPER+RGGGGRGGGDDA+RDSRR
Sbjct:  175 GGQTGREGDAAEPAPSAAADDGEAQQGSFLSDESSFAENVMLAPCGQQTLVSLWDLRKARPSFTFAPKDAEQKGMVMCVRLLGESPSCASPFAVVGHDAGHLCVYDLRATSAEPLLESRLHKVPLLCVDVGSSCRQGVSGSADESINVFTLSTRKASCGSCEVVKSFRLEHPGTSCVEIRRDQKLFVSGGWDHR-------------VRAFSWKTPRPLAVLRSHEKNVHTVAYSPRIGGLVSGSGDSRVAVWELYPERNRGGGGRGGGDDAMRDSRR 439          
BLAST of mRNA_Ecto-sp13_S_contig1426.3303.1 vs. uniprot
Match: D8LT91_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT91_ECTSI)

HSP 1 Score: 303 bits (776), Expect = 4.050e-99
Identity = 156/166 (93.98%), Postives = 160/166 (96.39%), Query Frame = 1
Query:    1 ERSPPGGQTGREGDAAEPPPSAAA--DDGEAQKGYFLSDESSFAENVMLAPCGQQTLVSLWDLRKARPSFTFAPKDAEQKGMVMCVRLLGESPSCASPFAVVGHDSGHLCVYDLRATSAEPLLESRLHKAPLLCVDVGSSCRQGVSGSADESINVFRLSTRKASCG 492
            ERSPP GQTGREG+AAEP PSAAA  +DGEAQ+G FLSDESSFAENVMLAPCGQQTLVSLWDLRKARPSFTFAPKDAEQKGMVMCVRLLGESPSCASPFAVVGHD+GHLCVYDLRATSAEPLLE RLHKAPLLCVDVGSSCRQGVSGSADESINVFRLSTRKASCG
Sbjct:  170 ERSPPCGQTGREGEAAEPAPSAAAAANDGEAQQGSFLSDESSFAENVMLAPCGQQTLVSLWDLRKARPSFTFAPKDAEQKGMVMCVRLLGESPSCASPFAVVGHDAGHLCVYDLRATSAEPLLEMRLHKAPLLCVDVGSSCRQGVSGSADESINVFRLSTRKASCG 335          
BLAST of mRNA_Ecto-sp13_S_contig1426.3303.1 vs. uniprot
Match: A0A2G9HCA9_9LAMI (G-protein beta subunit-like protein GNB1L n=1 Tax=Handroanthus impetiginosus TaxID=429701 RepID=A0A2G9HCA9_9LAMI)

HSP 1 Score: 127 bits (319), Expect = 7.180e-31
Identity = 73/211 (34.60%), Postives = 108/211 (51.18%), Query Frame = 1
Query:  160 TLVSLWDLRKARPSFTFAPKDAEQKGMVMCVRLLGESPSCASPFAVVGHDSGHLCVYDLRATSAEPLLESRLHKAPLLCVDVGSSCRQGVSGSADESINVFRLSTRKASCGSCDVVKSFHLEHPGTSCVEIRGDQKLFVSGGWDHRQAIHERQTFGWVLVRAFSWKTPRPLAVLRSHEKNVHTVAYSPRIGGLVSGSGDSRVAVWELYPER 792
            ++V +WD+  A      +    +  GM M VR    S S      + G++ G +  +DLR   A P+   + H  P++ + + SSC+ GVSGSADE I +F+L     S GSC V K   LE PG +   IR D K+F + GWDHR             VR + ++    LA+L+ H    + V++S   G + S S D+ VA+WELYP +
Sbjct:  150 SVVEIWDVNTAEKLIKLSHSSTKSSGMCMAVRAFLPSESEGYVNVMSGYEDGSMVWWDLR-NPALPVSRVKFHSEPVVSLCIDSSCKGGVSGSADEKIVMFKLDP---SIGSCLVKKEIILERPGVAGTSIRPDGKIFATAGWDHR-------------VRIYDYRKGNALAILKYHHATCNAVSFSANSGLMASSSEDATVALWELYPPK 343          
BLAST of mRNA_Ecto-sp13_S_contig1426.3303.1 vs. uniprot
Match: A0A6P5AZL2_BRABE (guanine nucleotide-binding protein subunit beta-like protein 1 isoform X1 n=1 Tax=Branchiostoma belcheri TaxID=7741 RepID=A0A6P5AZL2_BRABE)

HSP 1 Score: 116 bits (290), Expect = 7.660e-27
Identity = 78/236 (33.05%), Postives = 118/236 (50.00%), Query Frame = 1
Query:   94 GYFLSDESSFAENVMLAPCG-QQTLVSLWDLRKARPSFTFAPKDA-EQKGMVMCVRLLGESPSCASPFAVVGHDSGHLCVYDLRATSAEPLLESRLHKAPLLCVDVGSSCRQGVSGSADESINVFRLSTRKASCGSCDVVKSFHLEHPGTSCVEIRGDQKLFVSGGWDHRQAIHERQTFGWVLVRAFSWKTPRPLAVLRSHEKNVHTVAYSPRIGG----LVSGSGDSRVAVWELY 783
            G+   +  S     +LA  G  Q  V++ DLR  +P F+  P +    +GMVM ++    S S  SP  +  ++ G + V+D++       L  R H  P+LC+D      +G++GSAD  + V+   T K   G     ++  L +PG SCV+IRGD+KL V+GGWDH             L+R + WK  +PLAVL  H   V  V +S         L +GS D R+++W +Y
Sbjct:  110 GFCQVEMFSHGTGRLLAAAGASQAEVAVMDLRSKKPVFSLQPAEGCSPQGMVMALKAA--SGSDCSPL-LAAYEDGSVAVWDVKQRQIVSHL--RAHTEPILCMDYDQEQGKGITGSADNKLIVW---TNKD--GQLATKQTVELSNPGLSCVKIRGDRKLVVTGGWDH-------------LIRLYGWKKMKPLAVLDYHTDTVQCVDFSDHENSVDRLLAAGSKDQRISLWSIY 322          
BLAST of mRNA_Ecto-sp13_S_contig1426.3303.1 vs. uniprot
Match: A0A5A7RC52_STRAF (Transducin/WD40 repeat-like superfamily protein n=1 Tax=Striga asiatica TaxID=4170 RepID=A0A5A7RC52_STRAF)

HSP 1 Score: 113 bits (282), Expect = 1.550e-25
Identity = 75/240 (31.25%), Postives = 118/240 (49.17%), Query Frame = 1
Query:   82 EAQKGYFLSDESSFAENVMLAPCGQQ-TLVSLWDLRKARPSFTFAPKDAEQKGMVMCVRLLGESPSCASPFAVV-GHDSGHLCVYDLRATSAEPLLESRLHKAPLLCVDVGSSCRQGVSGSADESINVFRLSTRKASCGSCDVVKSFHLEHPGTSCVEIRGDQKLFVSGGWDHRQAIHERQTFGWVLVRAFSWKTPRPLAVLRSHEKNVHTVAYSPRIGGLVSGSGDSRVAVWELYPERS 795
            E Q+   +S       N  +A  G+  ++V +WD+  A        K  + K   MC+ +   SP   +   +V G++ G + ++D+R T    L   + H  P++ + V SSCR GVSGSAD+ I +F +       G C V K   LE PG +   IR D K+F + GWDHR             +R + ++    LAVL+ H +  + V++S     + S S D+ VA+WE+YP +S
Sbjct:  127 ENQRESEVSGSEDRTSNNYVALAGEDLSVVEIWDVDNAERLM----KLPQIKNSGMCMAVQAFSPLGNNNANIVSGYEDGSMALWDVRNTG-RALTFVKFHTEPIMSLCVDSSCRGGVSGSADDKIVIFTIDP---CAGLCLVKKEIVLERPGLAGTSIRADGKIFATAGWDHR-------------LRVYDYRRGNALAVLKYHHRTCNAVSFSDDCKLMASSSEDATVALWEIYPPKS 345          
BLAST of mRNA_Ecto-sp13_S_contig1426.3303.1 vs. uniprot
Match: A0A8C5MBL9_9ANUR (G protein subunit beta 1 like n=1 Tax=Leptobrachium leishanense TaxID=445787 RepID=A0A8C5MBL9_9ANUR)

HSP 1 Score: 112 bits (280), Expect = 2.170e-25
Identity = 72/235 (30.64%), Postives = 121/235 (51.49%), Query Frame = 1
Query:  100 FLSDESSFAENVMLAPCGQQ-TLVSLWDLRKARPSFTFAPKDAEQKGMVMCVRLLGESPSCASPFAVVGHDSGHLCVYDLRATSAEPLLESRLHKAPLLCVDVGSSCRQGVSGSADESINVFRLSTRKASCGSCDVVKSFHLEHPGTSCVEIRGDQKLFVSGGWDHRQAIHERQTFGWVLVRAFSWKTPRPLAVLRSHEKNVHTVAYS----PRIGGLVSGSGDSRVAVWELYPE 789
            F        +  +LA  G++ + V + DL   +   +  P++  + GM M + L  +  S +SP  +VG++ G + ++++        L S  H  P++ +D      +GVSGSAD S+NV++L  ++    +    K+  + +PG S + +R D+K+  +GGWD+R             VR FSWKT +PLAVL+ H+  VH V +S    P    L +GS D R+ +W +Y E
Sbjct:  111 FCKSSLLMTDPPLLAMPGKEGSQVQVLDLLSKKLVSSMNPEEGSRWGMAMSMHLW-QPVSGSSPMLLVGYEDGSVALWNVLQHRMVSRLAS--HTDPIMSLDFDCKQARGVSGSADNSLNVWKLDEQQ----NLKAYKTQMIVNPGISDIALRPDRKILATGGWDYR-------------VRIFSWKTMKPLAVLQYHKATVHAVCFSDHLKPEDRLLAAGSKDQRITLWSIYTE 325          
BLAST of mRNA_Ecto-sp13_S_contig1426.3303.1 vs. uniprot
Match: A0A7I4BYJ9_PHYPA (Uncharacterized protein n=5 Tax=Physcomitrium patens TaxID=3218 RepID=A0A7I4BYJ9_PHYPA)

HSP 1 Score: 111 bits (278), Expect = 4.580e-25
Identity = 76/231 (32.90%), Postives = 118/231 (51.08%), Query Frame = 1
Query:  109 DESSFAENVMLAPCGQQTL-VSLWDLRKARPSFTFAPKDAEQKGMVMCVRLL---GESPSCASPFAVVGHDSGHLCVYDLRATSAEPLLESRLHKAPLLCVDVGSSCRQGVSGSADESINVFRL-STRKASCGSCDVVKSFHLEHPGTSCVEIRGDQKLFVSGGWDHRQAIHERQTFGWVLVRAFSWKTPRPLAVLRSHEKNVHTVAYSPRIGGLVSGSGDSRVAVWELYP 786
            D    A  +++A  G  T  V +WD+   +     +PKD+   GM M + ++   GE   C     V G++ G + ++D R  +A PLL+S+ HK P+L + +      G+SGSAD  + +F   ST K         K F  +  G   + +RGD K+F + GWDHR +I++             ++  +PLA L+ H++ V+ VA+S     L SGS DS VA+W LYP
Sbjct:  114 DTRGAAGQILMAIAGNDTSKVEIWDITSGQRVQLLSPKDSSV-GMCMSLHMIFQSGEGDQCT---VVAGYEDGSMLMWDTRHPAA-PLLQSKQHKEPVLSLVLDGPGLGGISGSADGQLTLFSFNSTEKVYTPK----KKFEGQ-AGIGDIALRGDDKIFATSGWDHRVSIYD-------------YRRRKPLAFLKYHKEIVNGVAFSEDKKWLASGSKDSTVALWSLYP 321          
BLAST of mRNA_Ecto-sp13_S_contig1426.3303.1 vs. uniprot
Match: A0A7N0UWK6_KALFE (Uncharacterized protein n=2 Tax=Kalanchoe fedtschenkoi TaxID=63787 RepID=A0A7N0UWK6_KALFE)

HSP 1 Score: 111 bits (277), Expect = 1.460e-24
Identity = 74/237 (31.22%), Postives = 115/237 (48.52%), Query Frame = 1
Query:  115 SSFAENVMLAPCGQQ-TLVSLWDLRKARPSFTFAPK---------DAEQKGMVMCVRLLGESPSCASPFAVVGHDSGHLCVYDLRATSAEPLLESRLHKAPLLCVDVGSSCRQGVSGSADESINVFRLSTRKASCGSCDV-VKSFHLEHPGTSCVEIRGDQKLFVSGGWDHRQAIHERQTFGWVLVRAFSWKTPRPLAVLRSHEKNVHTVAYSPRIGGLVSGSGDSRVAVWELYPER 792
            S+   +  +A  G+Q + + +WDL  A+   T  PK           + +GM M V     S S      + G++ G +C +D+R   A PLL  + H  P+L + +    R G+SG+AD+ + +F L   K     C V  K   LE PG S + IR D K+  + GWDHR             +R +++    PLA+L+ H    + V++SP    L S S D+ VA+W+LYP +
Sbjct:  168 SNCQRSEYVAIAGEQPSQIEIWDLNTAQ-KITCLPKHESNGSLHHSTKSRGMCMAVEAFIPSESQGFLHVLAGYEDGSICWWDVR-NPAFPLLSEKYHSEPVLSLCLDPLFRGGISGAADDRVEMFYLDHVKC----CFVHKKDIKLERPGISSISIRPDGKIAATAGWDHR-------------IRIYNYHQGNPLAILKYHHSLCNAVSFSPDSRLLASSSQDATVALWKLYPPK 385          
BLAST of mRNA_Ecto-sp13_S_contig1426.3303.1 vs. uniprot
Match: A0A1B0D102_PHLPP (Uncharacterized protein n=1 Tax=Phlebotomus papatasi TaxID=29031 RepID=A0A1B0D102_PHLPP)

HSP 1 Score: 105 bits (263), Expect = 4.870e-23
Identity = 72/241 (29.88%), Postives = 117/241 (48.55%), Query Frame = 1
Query:   82 EAQKGYFLSDESSFAENVMLAPCGQQTLVSLWDLRKARPSFTFAPKDAEQKGMVMCVRLLGESPSCASPFAVVG-HDSGHLCVYDLRATSAEPLLESRLHKAPLLCVDVGSSCRQGVSGSADESINVFRLSTRKASCGSCDVVKSFHLEHPGTSCVEIRGDQKLFVSGGWDHRQAIHERQTFGWVLVRAFSWKTPRPLAVLRSHEKNVHTVAYSP------RIGGLVSGSGDSRVAVWELY 783
            E + G F   + S   +++L P G+  L  + +LR         P+  E  G +M ++++    SC     V+G  +SGH   +DLR    + L   +L + P+  +D  S   +G+    ++ I+VF     +        +   +L++PG SC+ IR D+K+FVSGGWD R             +R FSWK+ RPLAVL  H+K++  VA+SP      R   +     D ++ +W LY
Sbjct:   99 ETESGNFCRIDCSDERDLLLVPKGENHL-HIHNLRDLSLVMKLTPEGNENFGALMSIKIIDPDASC-----VLGAFESGHFVTWDLR--EGKVLSVKKLEECPM-ALDYDSLTNRGIYAGPNDKIHVFDYQRPQMLLHERSEI---NLKNPGVSCLRIRPDRKIFVSGGWDGR-------------IRVFSWKSLRPLAVLTEHKKSISDVAFSPGRVELWRAPLMAIAGEDRQITLWNLY 314          
BLAST of mRNA_Ecto-sp13_S_contig1426.3303.1 vs. uniprot
Match: A0A1L8DM75_9DIPT (Putative g-protein beta subunit-like protein gnb1l (Fragment) n=2 Tax=Nyssomyia neivai TaxID=330878 RepID=A0A1L8DM75_9DIPT)

HSP 1 Score: 106 bits (264), Expect = 5.240e-23
Identity = 74/242 (30.58%), Postives = 120/242 (49.59%), Query Frame = 1
Query:   82 EAQKGYFLSDESSFAENVMLAPCGQQTLVSLWDLRKARPSFTFAPKDAEQKGMVMCVRLLGESPSCASPFAVVG-HDSGHLCVYDLRATSAEPLLESRLHKAPLLCVDVGSSCRQGVSGSADESINVFRLSTRKASCGSCDVVKSFHLEHPGTSCVEIRGDQKLFVSGGWDHRQAIHERQTFGWVLVRAFSWKTPRPLAVLRSHEKNVHTVAYSPRIGGL-------VSGSGDSRVAVWELY 783
            E + G F   + S  +++++ P G+  L  +  LR   P     P+  E  G +M VR++       +P AV+G  +SGH   +D+R      L  ++L ++  L +D      +G+     + I +F     + +      +    L++PG SC+ IR D+K+FVSGGWD R             VR FSWK+ RPLAVL  H+KN+  +A+SP    L       ++G  DS++ +W+LY
Sbjct:  127 ETESGNFCRIDCSDEKDLVVVPKGENHL-DVHSLRDLAPVLKLLPECEENVGALMSVRII-------NPHAVLGTFESGHFITWDIR--EGRVLSVAKLKES--LALDYDDLTNRGIYAGPGDRIGIFAFQKPQMTMQERSEIT---LKNPGVSCLRIRPDRKIFVSGGWDGR-------------VRVFSWKSLRPLAVLTEHKKNILDIAFSPGPVDLWKAPLMAIAGE-DSQITLWDLY 339          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1426.3303.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KCI8_9PHAE1.190e-17791.37Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LT91_ECTSI4.050e-9993.98Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A2G9HCA9_9LAMI7.180e-3134.60G-protein beta subunit-like protein GNB1L n=1 Tax=... [more]
A0A6P5AZL2_BRABE7.660e-2733.05guanine nucleotide-binding protein subunit beta-li... [more]
A0A5A7RC52_STRAF1.550e-2531.25Transducin/WD40 repeat-like superfamily protein n=... [more]
A0A8C5MBL9_9ANUR2.170e-2530.64G protein subunit beta 1 like n=1 Tax=Leptobrachiu... [more]
A0A7I4BYJ9_PHYPA4.580e-2532.90Uncharacterized protein n=5 Tax=Physcomitrium pate... [more]
A0A7N0UWK6_KALFE1.460e-2431.22Uncharacterized protein n=2 Tax=Kalanchoe fedtsche... [more]
A0A1B0D102_PHLPP4.870e-2329.88Uncharacterized protein n=1 Tax=Phlebotomus papata... [more]
A0A1L8DM75_9DIPT5.240e-2330.58Putative g-protein beta subunit-like protein gnb1l... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1426contigEcto-sp13_S_contig1426:2..3525 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeViridiplantae
Stop1
Start0
Seed ortholog score125.2
Seed ortholog evalue5e-26
Seed eggNOG ortholog4006.Lus10019636
Model size852
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000075,GO:0000151,GO:0003006,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0006282,GO:0006810,GO:0006950,GO:0006974,GO:0007275,GO:0008150,GO:0009555,GO:0009636,GO:0009663,GO:0009790,GO:0009791,GO:0009793,GO:0009908,GO:0009987,GO:0010035,GO:0010038,GO:0010044,GO:0010154,GO:0010162,GO:0010431,GO:0010496,GO:0010497,GO:0010564,GO:0016043,GO:0019219,GO:0019222,GO:0021700,GO:0022414,GO:0022611,GO:0031323,GO:0031461,GO:0031570,GO:0032501,GO:0032502,GO:0032504,GO:0032991,GO:0033554,GO:0034330,GO:0035670,GO:0042221,GO:0042493,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044464,GO:0045216,GO:0045786,GO:0045787,GO:0048229,GO:0048316,GO:0048367,GO:0048437,GO:0048438,GO:0048440,GO:0048467,GO:0048481,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048608,GO:0048609,GO:0048700,GO:0048731,GO:0048827,GO:0048856,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051052,GO:0051171,GO:0051179,GO:0051234,GO:0051239,GO:0051716,GO:0051726,GO:0060255,GO:0061458,GO:0065007,GO:0071156,GO:0071158,GO:0071695,GO:0071840,GO:0072718,GO:0080008,GO:0080090,GO:0080134,GO:0080135,GO:0090068,GO:0090567,GO:0097327,GO:0097439,GO:0099402,GO:1902494,GO:1990234,GO:2000026,GO:2000280,GO:2001020
Exons6
EggNOG free text desc.Guanine nucleotide-binding protein subunit beta-like protein 1 homolog
EggNOG OGs37IE2@33090,3GF2H@35493,4JF57@91835,COG2319@1,KOG0322@2759
Cds size852
COG Functional cat.S
Best tax levelfabids
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1426.3303.1prot_Ecto-sp13_S_contig1426.3303.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig1426 2..3525 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462762.123032-CDS-Ecto-sp13_S_contig1426:1..1661681462762.123032-CDS-Ecto-sp13_S_contig1426:1..166Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1426 2..166 +
1681462762.134417-CDS-Ecto-sp13_S_contig1426:571..6411681462762.134417-CDS-Ecto-sp13_S_contig1426:571..641Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1426 572..641 +
1681462762.1430109-CDS-Ecto-sp13_S_contig1426:943..10961681462762.1430109-CDS-Ecto-sp13_S_contig1426:943..1096Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1426 944..1096 +
1681462762.1516902-CDS-Ecto-sp13_S_contig1426:1792..18931681462762.1516902-CDS-Ecto-sp13_S_contig1426:1792..1893Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1426 1793..1893 +
1681462762.1608012-CDS-Ecto-sp13_S_contig1426:2573..27191681462762.1608012-CDS-Ecto-sp13_S_contig1426:2573..2719Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1426 2574..2719 +
1681462762.1786485-CDS-Ecto-sp13_S_contig1426:3308..35251681462762.1786485-CDS-Ecto-sp13_S_contig1426:3308..3525Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1426 3309..3525 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig1426.3303.1

>prot_Ecto-sp13_S_contig1426.3303.1 ID=prot_Ecto-sp13_S_contig1426.3303.1|Name=mRNA_Ecto-sp13_S_contig1426.3303.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=284bp
ERSPPGGQTGREGDAAEPPPSAAADDGEAQKGYFLSDESSFAENVMLAPC
GQQTLVSLWDLRKARPSFTFAPKDAEQKGMVMCVRLLGESPSCASPFAVV
GHDSGHLCVYDLRATSAEPLLESRLHKAPLLCVDVGSSCRQGVSGSADES
INVFRLSTRKASCGSCDVVKSFHLEHPGTSCVEIRGDQKLFVSGGWDHRQ
AIHERQTFGWVLVRAFSWKTPRPLAVLRSHEKNVHTVAYSPRIGGLVSGS
GDSRVAVWELYPERSRGGGGRGGGDDAIRDSRR*
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mRNA from alignment at Ecto-sp13_S_contig1426:2..3525+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig1426.3303.1 ID=mRNA_Ecto-sp13_S_contig1426.3303.1|Name=mRNA_Ecto-sp13_S_contig1426.3303.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3524bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1426:2..3525+ (Ectocarpus species13 EcNAP12_S_4_19m)
GAGCGGTCGCCGCCTGGTGGGCAGACGGGGCGGGAGGGAGATGCGGCGGA GCCGCCACCATCCGCAGCAGCCGACGATGGGGAAGCACAGAAAGGTTATT TTCTCTCGGACGAAAGTTCCTTCGCAGAAAACGTCATGCTTGCGCCGTGC GGGCAACAGACATTGGTGAGAGGCTGTGATCCCAGGTCGGGCATTCTTGT GGCCGCGAATGCGTGCTCTCGTCCACTGCTGTGTTGGAACGCACCAGCGT CAGTGGATTTGGCGCGCTGGACACGTTTGGGAGAGTCAGTAGAGAGAAAT TTCTACGCGTTGGTGGAAGAACATGCGAGTCTACGAACCGCGTGAACCGG GTTTGGTCGATTATGCTTCACTTGACGTTCACGGCCAGGCGCGATCGACC ACCGTATATGTATGAACCCCTTCTCCTGACCTTTGGCCCTGTACCGTTGA ACAGAGAGTAAAACGTGGGCGGGTCAAGAGATTTTTTTTATGAGGAAAGT TTGCATGTTTGATTTCGCCGCTAGGTTTCGCGAAACGATTGATGGCACAT TTCCCCTTTCTTGCGATCAGGTGTCCTTGTGGGACCTGCGGAAGGCGAGG CCGTCTTTCACCTTCGCTCCGAAAGATGCCGAGCAGAAAGGTAAGAGAGT CGGCTGCGTGAATTGCCACGATGCCGCATCCCCGTCGGCATGCTTGTTCT ACGCTTACACCAGCCCCACTTGTCAGCAACTCCCCGAGTAACTCCCCCTG CCTGACGTTCCAGGGTTGAAACACGTGTCGCTCGAAAACTGGCCTTCCTT AGATATAAACAGCGCGTGTGCGCTTTATCCACGTCCAATACCTGCTGTTG TCTGTCTTCGCCACCGCCACCGCCACCGCCTCTGCCGTCACCGCCGCTAA TCGCGCCTCCGGTACGGACGGGACTCACGCACGTACACACAGGCATGGTG ATGTGCGTGCGGCTTCTGGGAGAGTCGCCCTCGTGCGCGAGTCCGTTCGC GGTGGTTGGGCACGACTCCGGGCACCTGTGCGTGTACGACCTGAGGGCCA CCTCCGCGGAGCCGCTGCTGGAGTCGCGGCTCCACAAGGCGCCACGTGAG ATGCGACGTGTGATGTTGTTAGCGTTGTCAACCACTTGCTTGTTTTCTTT GTCAGTCATACACCAGCACCAAATCGGATTTTTCACACGCACGGGCTGGA AGACGAGTTTCATCGGCGGTACGTACATCCTGAGAGATATTTTGTGCTCT GTCTACAATGTAGGTATCTCTCTCGCACGAAAAGAATGAGGGAGTCCGGG AGACAAGGGGTGTTCTCTTGGCTTGTACTGCTGTGACGCAGCTCACTCAG TTAGCGGTGGCGGGGGTCTAACATGTGTCGAGTAGAGCCGTAAAGCAATT AGAGGCAAAACATCCAAGAGCTTCCTTCGGCGAGAATAGAGCGGCGTCGT CAGCCAAGACTAATCGGGCAAGGACAGTTGGGGGCCGGAGGGCGTGCGTC CGTTTGGTGTCAATGCTAGACCTGCATGGTCCGTTTTCACGTCCGCTCTC CCGCTGCGGACGAGCGCACGTCCTCAATGAATTTTGTTGTTTTACGAAGT CTCCAGAGAGTTTTCTTTTGGGACGTCTTTCGCTCGTCACTTCGCGGGTC CACGCTGAAAAACGAGACCGCACTGTTGTCCCCTCCTCTGTCCTCCCCAC GCTGTGTCTGGTACCTTCCTACCCTCCGGTTGTTGTTCGTGTTTGGTCCG CTTTTTTATCCGTTCCACGGCGCGAACGGCGGGCGGGGCAGTACTCTGCG TGGACGTAGGGTCTTCCTGTAGGCAGGGCGTGTCTGGGTCTGCCGACGAG AGCATCAACGTCTTCAGGTTGTCCACCAGAAAGGCGAGTTGTGTGGGGGG GGGGGGGGGGTACTCATAGTCGTGCATGCCGTAGTCGTTAGACCATGGGA GGGGGGGGGAGCACGTCCTAATTTCTTGTACACGTACGATTTTGGCCTGG GTTTGCTGAAAGAAGAGTTTTGTTGACACCGCTAACGGACTTTGGTCGAC GGTGACGTTTCGTCGCGCCTTTCGGAAGTGTTCGGAGGATATTTCAACAA GCCAGCAAGTAGCAAGCATCATCTCACACGCATACGGGAGACTCATTGGA GCTGCTGATCGGCGCTCAAAGAGCTAAATCGTAGCACTGACCGTGCGGGA TGTGCAGGGAACAGAGTCAAACGGCCTGCTTTGTAGGCTACATTTACGTT TTTGAGTTCACCTCTTAACTTTTTAACGGAGTCAAGGATGAAGAGGACGA TGTTGCCTTGGGAGGAGCAGACGTCAGAATCATACATGGAATGGTACACT ACAGAGCGAGCGAACAGTCGTTGTCCTAGCATTAGAAATGGTTGCCTCAA CGGGCGTAGCAGGAAGAAAAAAGGCTGGGAAACGTTTTTGTGGTATCTGT CGAGTGTGGCAGAACAATTTGACGAAGGAGAGCCCAGGTTCGGAAAATAC TTGATCAATTGTCAACGGTGAAGGCAACCGACAAGCCTCCCCCCCCGCGC GCCCCCACTGCTGCACGCGCAGGGATCGTGCGATGTGGTCAAGTCGTTCC ACTTGGAACACCCTGGGACGTCTTGCGTCGAGATCCGGGGGGACCAGAAG CTCTTCGTTTCTGGGGGTTGGGACCACAGGCAGGCGATACACGAGAGGCA GACTTTTGGCTGGGTGCTGTTCCAAAAAGTGCAGGCCGTATTAAAGCCGA ACGGCGTTTGGGGGACTGGGACCGCCGGCCGGCGACGAATGCACTCGAGA ATTGTGTGCACCGTGCACGCGGGGTAGCACTCGCTGAGCGTGCGCATGTC CCCCCCCTCCCCCAACTTTCGACCGGAGTTTAAACAGGCCGCCGGTGCTA CATAGTGCTCGAACGGTAGCTCTTCCTGCAAGTGCAGATTGCCACGTTTG TGGCGATTGATGAGATTTGAGAATTCTTGCGTCGTTGCCTTCACTGATTT TTTGCCTGCCTCGGGAGGGGTTCTCGAATACTTGTCATCGTCAGCGGGAC TCATGAATCCACCGGTTTTTGTGGGAGAGGGGAGTAACAACAACAGTCCC GGCAACGTTGGCCAGAGGTCCAAGATGAAGGGTTAGCTGCCAAGAAACCT TGGGATTCTCCAGAAGAGAGAGAGGGAAAGAGAAAGAGCACCAGCACGCC GATCATGTCTATGCCCCGTCCCCGAAACGAGAACACGCGAACGTGCCGTG GACTGCGTGTTTGTGTAATCTTCATCTTGTGCCCACCCTCAACCAACCGA CCCGCAGGGTACGAGCCTTCAGCTGGAAGACCCCGCGCCCCCTGGCGGTG CTCAGGTCTCACGAGAAGAACGTTCACACCGTCGCATACAGTCCCCGGAT AGGCGGGCTGGTGTCCGGCTCAGGGGACTCGAGGGTTGCCGTGTGGGAGC TGTATCCCGAGAGGAGTCGCGGGGGCGGAGGCAGAGGCGGGGGGGACGAC GCCATAAGAGATAGCAGGAGATGA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1426:2..3525+

>mRNA_Ecto-sp13_S_contig1426.3303.1 ID=mRNA_Ecto-sp13_S_contig1426.3303.1|Name=mRNA_Ecto-sp13_S_contig1426.3303.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=852bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1426:2..3525+ (Ectocarpus species13 EcNAP12_S_4_19m)
GAGCGGTCGCCGCCTGGTGGGCAGACGGGGCGGGAGGGAGATGCGGCGGA
GCCGCCACCATCCGCAGCAGCCGACGATGGGGAAGCACAGAAAGGTTATT
TTCTCTCGGACGAAAGTTCCTTCGCAGAAAACGTCATGCTTGCGCCGTGC
GGGCAACAGACATTGGTGTCCTTGTGGGACCTGCGGAAGGCGAGGCCGTC
TTTCACCTTCGCTCCGAAAGATGCCGAGCAGAAAGGCATGGTGATGTGCG
TGCGGCTTCTGGGAGAGTCGCCCTCGTGCGCGAGTCCGTTCGCGGTGGTT
GGGCACGACTCCGGGCACCTGTGCGTGTACGACCTGAGGGCCACCTCCGC
GGAGCCGCTGCTGGAGTCGCGGCTCCACAAGGCGCCACTACTCTGCGTGG
ACGTAGGGTCTTCCTGTAGGCAGGGCGTGTCTGGGTCTGCCGACGAGAGC
ATCAACGTCTTCAGGTTGTCCACCAGAAAGGCGAGTTGTGGATCGTGCGA
TGTGGTCAAGTCGTTCCACTTGGAACACCCTGGGACGTCTTGCGTCGAGA
TCCGGGGGGACCAGAAGCTCTTCGTTTCTGGGGGTTGGGACCACAGGCAG
GCGATACACGAGAGGCAGACTTTTGGCTGGGTGCTGGTACGAGCCTTCAG
CTGGAAGACCCCGCGCCCCCTGGCGGTGCTCAGGTCTCACGAGAAGAACG
TTCACACCGTCGCATACAGTCCCCGGATAGGCGGGCTGGTGTCCGGCTCA
GGGGACTCGAGGGTTGCCGTGTGGGAGCTGTATCCCGAGAGGAGTCGCGG
GGGCGGAGGCAGAGGCGGGGGGGACGACGCCATAAGAGATAGCAGGAGAT
GA
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