Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 0 |
| Model size | 246 |
| Hectar predicted targeting category | other localisation |
| Exons | 3 |
| Cds size | 228 |
Relationships
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1681462500.6778522-UTR-Ecto-sp13_S_contig10016:3954..3970 | 1681462500.6778522-UTR-Ecto-sp13_S_contig10016:3954..3970 | Ectocarpus species13 EcNAP12_S_4_19m | UTR | Ecto-sp13_S_contig10016 3955..3970 - |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1681462500.6882222-CDS-Ecto-sp13_S_contig10016:3970..4033 | 1681462500.6882222-CDS-Ecto-sp13_S_contig10016:3970..4033 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig10016 3971..4033 - |
| 1681462500.7007306-CDS-Ecto-sp13_S_contig10016:4687..4776 | 1681462500.7007306-CDS-Ecto-sp13_S_contig10016:4687..4776 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig10016 4688..4776 - |
| 1681462500.7133207-CDS-Ecto-sp13_S_contig10016:4970..5046 | 1681462500.7133207-CDS-Ecto-sp13_S_contig10016:4970..5046 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig10016 4971..5046 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig10016.34.1 >prot_Ecto-sp13_S_contig10016.34.1 ID=prot_Ecto-sp13_S_contig10016.34.1|Name=mRNA_Ecto-sp13_S_contig10016.34.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=76bp
TTGQAARAAKALATLNVRKGQRRRGEPRVELPCGRRRRPPPSAKRCSLRK
GQLLWKHAGFDAYISTPAAACLRRC* back to topmRNA from alignment at Ecto-sp13_S_contig10016:3955..5046- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_Ecto-sp13_S_contig10016.34.1 ID=mRNA_Ecto-sp13_S_contig10016.34.1|Name=mRNA_Ecto-sp13_S_contig10016.34.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1092bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10016:3955..5046- (Ectocarpus species13 EcNAP12_S_4_19m)
ACAACGGGTCAAGCAGCAAGGGCTGCGAAGGCGTTGGCGACCCTGAACGT
CAGGAAGGGGCAGAGAAGGAGAGGAGGTGCGAGGTTTCTTGGTATTTTGT
AGCTGCAAAGCTAGGTTGTGTTGCTCCCCCATGGGATCTGCAGAGCCAAC
GGGAAAACGCCCCCTTCATCCCGCCACACAACAATCTGTTCGTTGCCCGA
CGTTCTGGCTCTCTCTCTTTTCTTTGCCCTCGGACATATGCATGGCCGTG
ACTCTGTGTTGCGTGTCAAGAACCTAGAGTCGAGTTGCCATGCGGGAGGA
GGAGGAGGCCGCCCCCGTCTGCGAAGAGATGTTCATTGCGAAAGGGTCAA
TTGCTGTGGGTGGGTTGCATCAAGGGCACAAATTGTCAAAGGAATCAAAC
ACCTGTACTCCAGCATTTCAAAGCAACGGTTGGTGATGTGCGTTGTTGCT
GCTCTCAAACTATCAAATTGGATCGCTTACTGGCCGGGGCACCCGTGCCC
GAGCGTATGTGCAATATCAAGATGTACACTACATGCCCGCTCTTCTCCAC
CGTCGTCTCCGCGAGTCTACGGCGTGGAGTAGATTATCATTCTGAAGCAG
CAACCAAGGCAGATTTAAAGCCTTGTAGGATCACCAGGTAGGGTGACTGC
TGTGAATCGGCAAACGCCGTCATCAAGATAAAGTTGTGCATGATGATTCC
CCACCCAAATCACCGTACAAGTATGCACACATATTAAAAACTGCATAATC
TGCGCTATTTCGCTATTTTTTATGCTGATACGTAGTATAAATCTCCGCCA
GATTCTCTCCGCTTTTACGGCGAGAAACTCTTCCCCTCCCCCCGCCGCCC
CTTCAAGGCACCCGCTGGTCAACCATTCGGTATACATCTCACCTCATCTC
CTCGTCGTTTTCCCTCATTGCTTGCCTGCCTACGATGCTGACATCAACAT
CCACGCGGCCCATCTTTCCCTCCGCGCCTACTGCTGTCTACACCTCGTGC
CACCAACCTTCAGAAGCACGCAGGGTTTGACGCGTACATATCAACACCGG
CTGCTGCGTGCCTCCGTCGATGCTAACAAATAATTCACCGCC back to topCoding sequence (CDS) from alignment at Ecto-sp13_S_contig10016:3955..5046- >mRNA_Ecto-sp13_S_contig10016.34.1 ID=mRNA_Ecto-sp13_S_contig10016.34.1|Name=mRNA_Ecto-sp13_S_contig10016.34.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=228bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10016:3955..5046- (Ectocarpus species13 EcNAP12_S_4_19m)
ACAACGGGTCAAGCAGCAAGGGCTGCGAAGGCGTTGGCGACCCTGAACGT
CAGGAAGGGGCAGAGAAGGAGAGGAGAACCTAGAGTCGAGTTGCCATGCG
GGAGGAGGAGGAGGCCGCCCCCGTCTGCGAAGAGATGTTCATTGCGAAAG
GGTCAATTGCTGTGGAAGCACGCAGGGTTTGACGCGTACATATCAACACC
GGCTGCTGCGTGCCTCCGTCGATGCTAA back to top
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